Structure of cytoplasmic RNA polymerase II
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Distinguishing self from non-self RNA by editing-specific inosine patterns
R. Varada, A.F. Leuchtenberger, C. Vesely, B.M. Kaczmarek, H. Mansouri Khosravi, T.C. Mandl, K. Milanovic, K. Honarmand Tamizkar, V. Rajendra, H. Senoner, L. Steinbichl, M. Borojevic, A. Sombke, K. Schmidt, M. Eckhard, I.L. Hofacker, C. Walkley, J.E. Heraud-Farlow, E. Picardi, C. Bernecky, M.F. Jantsch, Nucleic Acids Research 54 (2026).

Mechanistic insights into MD selectivity and regulation
D. Michalik, Mechanistic Insights into MD Selectivity and Regulation, Institute of Science and Technology Austria, 2026.

Mechanism of mammalian transcriptional repression by noncoding RNA
K. Tluckova, B.M. Kaczmarek, A.P. Testa Salmazo, C. Bernecky, Nature Structural &; Molecular Biology 32 (2025) 607–612.

Understanding the machinery that reads the genome
C. Bernecky, Nature Reviews Molecular Cell Biology 26 (2025).

Ancestral origin and functional expression of a hyaluronic acid pathway complement in mussels
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Regulation of Cytoplasmic RNA Polymerase II
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Role of dynamin-related proteins 2 and S in clathrin-mediated endocytosis in Arabidopsis thaliana
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STK19 drives transcription-coupled repair by stimulating repair complex stability, RNA Pol II ubiquitylation, and TFIIH recruitment
A.R. Ramadhin, S.-H. Lee, D. Zhou, A.P. Testa Salmazo, C. Gonzalo-Hansen, M. van Sluis, C.M.A. Blom, R.C. Janssens, A. Raams, D. Dekkers, K. Bezstarosti, D. Slade, W. Vermeulen, A. Pines, J.A.A. Demmers, C. Bernecky, T.K. Sixma, J.A. Marteijn, Molecular Cell 84 (2024) 4740–4757.e12.

Novel dihydropteridinone derivatives as potent inhibitors of the understudied human kinases vaccinia-related kinase 1 and casein kinase 1;4/;5
F.H. de Souza Gama, L.A. Dutra, M. Hawgood, C.V. dos Reis, R.A.M. Serafim, M.A. Ferreira, B.V.M. Teodoro, J.E. Takarada, A.S. Santiago, D.-I. Balourdas, A.-S. Nilsson, B. Urien, V.M. Almeida, C. Gileadi, P.Z. Ramos, A.P. Testa Salmazo, S.N.S. Vasconcelos, M.R. Cunha, S. Mueller, S. Knapp, K.B. Massirer, J.M. Elkins, O. Gileadi, A. Mascarello, B.B.L.G. Lemmens, C.R.W. Guimarães, H. Azevedo, R.M. Couñago, Journal of Medicinal Chemistry 67 (2024) 8609–8629.

Biochemical and structural insights into ADA RNA editing
B.M. Kaczmarek, Biochemical and Structural Insights into ADA RNA Editing, Institute of Science and Technology Austria, 2024.

Role of dynamin-related proteins 2 and S in clathrin-mediated endocytosis in plants
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The human RNA polymerase I structure reveals an HMG-like docking domain specific to metazoans
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Structural and functional basis of mammalian microRNA biogenesis by Dicer
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PH regulates neuronal gene expression through the Pol II CTD reader domain SPOC
L.-M. Appel, V. Franke, M. Bruno, I. Grishkovskaya, A. Kasiliauskaite, T. Kaufmann, U.E. Schoeberl, M.G. Puchinger, S. Kostrhon, C. Ebenwaldner, M. Sebesta, E. Beltzung, K. Mechtler, G. Lin, A. Vlasova, M. Leeb, R. Pavri, A. Stark, A. Akalin, R. Stefl, C. Bernecky, K. Djinovic-Carugo, D. Slade, Nature Communications 12 (2021).

Calcium modulates the domain flexibility and function of an ;1-actinin similar to the ancestral ;1-actinin
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Stochastic activation and bistability in a Rab GTPase regulatory network
U. Bezeljak, H. Loya, B.M. Kaczmarek, T.E. Saunders, M. Loose, Proceedings of the National Academy of Sciences of the United States of America 117 (2020) 6504–6549.

Nuclear translocation of glutaminase GL in human cancer cells associates with proliferation arrest and differentiation
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