The simplest maximum entropy model for collective behavior in a neural network
G. Tkadik, O. Marre, T. Mora, D. Amodei, M. Berry, W. Bialek, Journal of Statistical Mechanics Theory and Experiment 2013 (2013).
LibreCat: https://research-explorer.ista.ac.at/record/2850
DOI: 10.1088/1742-5468/2013/03/P03011
arXiv: 1207.6319

A simple method for estimating the entropy of neural activity
M. Berry, G. Tkadik, J. Dubuis, O. Marre, R. Da Silveira, Journal of Statistical Mechanics Theory and Experiment 2013 (2013).
LibreCat: https://research-explorer.ista.ac.at/record/2851
DOI: 10.1088/1742-5468/2013/03/P03015

Stimulus-dependent maximum entropy models of neural population codes
E. Granot Atedgi, G. Tkadik, R. Segev, E. Schneidman, PLoS Computational Biology 9 (2013).
LibreCat: https://research-explorer.ista.ac.at/record/2863
DOI: 10.1371/journal.pcbi.1002922

Lyapunov exponent and topological entropy plateaus in piecewise linear maps
V. Botella Soler, J. Oteo, J. Ros, P. Glendinning, Journal of Physics A: Mathematical and Theoretical 46 (2013).
LibreCat: https://research-explorer.ista.ac.at/record/2861
DOI: 10.1088/1751-8113/46/12/125101

Retinal metric: a stimulus distance measure derived from population neural responses
G. Tkadik, E. Granot Atedgi, R. Segev, E. Schneidman, Physical Review Letters 110 (2013).
LibreCat: https://research-explorer.ista.ac.at/record/2913
DOI: 10.1103/PhysRevLett.110.058104

Positional information, in bits
J. Dubuis, G. Tkadik, E. Wieschaus, T. Gregor, W. Bialek, PNAS 110 (2013) 16301–16308.
LibreCat: https://research-explorer.ista.ac.at/record/3261
DOI: 10.1073/pnas.1315642110
PMID: 24089448

Dynamic persistence of antibiotic-stressed mycobacteria
Y. Wakamoto, N. Dhar, R.P. Chait, K. Schneider, F. Signorino Gelo, S. Leibler, J. Mckinney, Science 339 (2013) 91–95.
LibreCat: https://research-explorer.ista.ac.at/record/499
DOI: 10.1126/science.1229858

Transformation of stimulus correlations by the retina
K. Simmons, J. Prentice, G. Tkadik, J. Homann, H. Yee, S. Palmer, P. Nelson, V. Balasubramanian, PLoS Computational Biology 9 (2013).
LibreCat: https://research-explorer.ista.ac.at/record/2277
DOI: 10.1371/journal.pcbi.1003344

Statistical thermodynamics of natural images
G. Stephens, T. Mora, G. Tkadik, W. Bialek, Physical Review Letters 110 (2013).
LibreCat: https://research-explorer.ista.ac.at/record/2914
DOI: 10.1103/PhysRevLett.110.018701
arXiv: 0806.2694

Optimizing information flow in small genetic networks. III. A self-interacting gene
G. Tkadik, A. Walczak, W. Bialek,  Physical Review E Statistical Nonlinear and Soft Matter Physics  85 (2012).
LibreCat: https://research-explorer.ista.ac.at/record/3262
DOI: 10.1103/PhysRevE.85.041903

A 2.5D-Fourier-BEM model for vibrations in a tunnel running through layered anisotropic soil
G. Rieckh, W. Kreuzer, H. Waubke, P. Balazs,  Engineering Analysis with Boundary Elements 36 (2012) 960–967.
LibreCat: https://research-explorer.ista.ac.at/record/3274
DOI: 10.1016/j.enganabound.2011.12.014

Information transmission in genetic regulatory networks a review
G. Tkadik, A. Walczak, Journal of Physics: Condensed Matter 23 (2011).
LibreCat: https://research-explorer.ista.ac.at/record/3374
DOI: 10.1088/0953-8984/23/15/153102

Natural images from the birthplace of the human eye
G. Tkadik, P. Garrigan, C. Ratliff, G. Milcinski, J. Klein, L. Seyfarth, P. Sterling, D. Brainard, V. Balasubramanian, PLoS One 6 (2011).
LibreCat: https://research-explorer.ista.ac.at/record/3384
DOI: 10.1371/journal.pone.0020409