Pleska, Maros, Moritz Lang, Dominik Refardt, Bruce Levin, and Calin C Guet. “Phage-Host Population Dynamics Promotes Prophage Acquisition in Bacteria with Innate Immunity.”https://doi.org/10.1038/s41559-017-0424-z__Nature Ecology and Evolution. Springer Nature, 2018.https://doi.org/10.1038/s41559-017-0424-z .

Bod’Ová, Katarína, Gabriel Mitchell, Roy Harpaz, Elad Schneidman, and Gasper Tkadik. “Implementation of the Inference Method in Matlab.”https://doi.org/10.1371/journal.pone.0193049.s001__Public Library of Science, 2018.https://doi.org/10.1371/journal.pone.0193049.s001 .

Ferrari, Ulisse, Stephane Deny, Matthew J Chalk, Gasper Tkadik, Olivier Marre, and Thierry Mora. “Separating Intrinsic Interactions from Extrinsic Correlations in a Network of Sensory Neurons.”https://doi.org/10.1103/PhysRevE.98.042410__Physical Review E. American Physical Society, 2018.https://doi.org/10.1103/PhysRevE.98.042410 .

Chalk, Matthew J, Olivier Marre, and Gasper Tkadik. “Toward a Unified Theory of Efficient, Predictive, and Sparse Coding.”https://doi.org/10.1073/pnas.1711114115__PNAS. National Academy of Sciences, 2018.https://doi.org/10.1073/pnas.1711114115 .

Bodova, Katarina, Jan Haskovec, and Peter Markowich. “Well Posedness and Maximum Entropy Approximation for the Dynamics of Quantitative Traits.”https://doi.org/10.1016/j.physd.2017.10.015__Physica D: Nonlinear Phenomena. Elsevier, 2018.https://doi.org/10.1016/j.physd.2017.10.015 .

Palmer, Adam, Remy P Chait, and Roy Kishony. “Nonoptimal Gene Expression Creates Latent Potential for Antibiotic Resistance.”https://doi.org/10.1093/molbev/msy163__Molecular Biology and Evolution. Oxford University Press, 2018.https://doi.org/10.1093/molbev/msy163 .

Botella Soler, Vicente, Stephane Deny, Georg S Martius, Olivier Marre, and Gasper Tkadik. “Nonlinear Decoding of a Complex Movie from the Mammalian Retina.”https://doi.org/10.1371/journal.pcbi.1006057__PLoS Computational Biology. Public Library of Science, 2018.https://doi.org/10.1371/journal.pcbi.1006057 .

Deny, Stephane, Olivier Marre, Vicente Botella-Soler, Georg S Martius, and Gasper Tkadik. “Nonlinear Decoding of a Complex Movie from the Mammalian Retina.”https://doi.org/10.15479/AT:ISTA:98__Institute of Science and Technology Austria, 2018.https://doi.org/10.15479/AT:ISTA:98 .

De Martino, Daniele, Andersson Anna Mc, Tobias Bergmiller, Calin C Guet, and Gasper Tkadik. “Statistical Mechanics for Metabolic Networks during Steady State Growth.”https://doi.org/10.1038/s41467-018-05417-9__Nature Communications. Springer Nature, 2018.https://doi.org/10.1038/s41467-018-05417-9 .

De Martino, Daniele, and Gasper Tkadik. “Supporting Materials ‘STATISTICAL MECHANICS FOR METABOLIC NETWORKS IN STEADY-STATE GROWTH.’”https://doi.org/10.15479/AT:ISTA:62__Institute of Science and Technology Austria, 2018.https://doi.org/10.15479/AT:ISTA:62 .

Igler, Claudia, Mato Lagator, Gasper Tkadik, Jonathan P Bollback, and Calin C Guet. “Evolutionary Potential of Transcription Factors for Gene Regulatory Rewiring.”https://doi.org/10.1038/s41559-018-0651-y__Nature Ecology and Evolution. Nature Publishing Group, 2018.https://doi.org/10.1038/s41559-018-0651-y .

Igler, Claudia, Mato Lagator, Gasper Tkadik, Jonathan P Bollback, and Calin C Guet. “Data for the Paper Evolutionary Potential of Transcription Factors for Gene Regulatory Rewiring.”https://doi.org/10.15479/AT:ISTA:108__Institute of Science and Technology Austria, 2018.https://doi.org/10.15479/AT:ISTA:108 .

Chait, Remy P, Jakob Ruess, Tobias Bergmiller, Gasper Tkadik, and Calin C Guet. “Shaping Bacterial Population Behavior through Computer Interfaced Control of Individual Cells.”https://doi.org/10.1038/s41467-017-01683-1__Nature Communications. Nature Publishing Group, 2017.https://doi.org/10.1038/s41467-017-01683-1 .

Der, Ralf, and Georg S Martius. “Dynamical Self Consistency Leads to Behavioral Development and Emergent Social Interactions in Robots.”https://doi.org/10.1109/DEVLRN.2016.7846789__IEEE, 2017.https://doi.org/10.1109/DEVLRN.2016.7846789 .

Der, Ralf, and Georg S Martius. “Self Organized Behavior Generation for Musculoskeletal Robots.”https://doi.org/10.3389/fnbot.2017.00008__Frontiers in Neurorobotics. Frontiers Research Foundation, 2017.https://doi.org/10.3389/fnbot.2017.00008 .

Humplik, Jan, and Gasper Tkadik. “Probabilistic Models for Neural Populations That Naturally Capture Global Coupling and Criticality.”https://doi.org/10.1371/journal.pcbi.1005763__PLoS Computational Biology. Public Library of Science, 2017.https://doi.org/10.1371/journal.pcbi.1005763 .

Harpaz, Roy, Gasper Tkadik, and Elad Schneidman. “Discrete Modes of Social Information Processing Predict Individual Behavior of Fish in a Group.”https://doi.org/10.1073/pnas.1703817114__PNAS. National Academy of Sciences, 2017.https://doi.org/10.1073/pnas.1703817114 .

Prentice, Jason, Olivier Marre, Mark Ioffe, Adrianna Loback, Gasper Tkadik, and Michael Berry. “Data from: Error-Robust Modes of the Retinal Population Code.”https://doi.org/10.5061/dryad.1f1rc__Dryad, 2017.https://doi.org/10.5061/dryad.1f1rc .

Chalk, Matthew J, Paul Masset, Boris Gutkin, and Sophie Denève. “Sensory Noise Predicts Divisive Reshaping of Receptive Fields.”https://doi.org/10.1371/journal.pcbi.1005582__PLoS Computational Biology. Public Library of Science, 2017.https://doi.org/10.1371/journal.pcbi.1005582 .

Chalk, Matthew J, Paul Masset, Boris Gutkin, and Sophie Denève. “Supplementary Appendix.”https://doi.org/10.1371/journal.pcbi.1005582.s001__Public Library of Science, 2017.https://doi.org/10.1371/journal.pcbi.1005582.s001 .