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Stankowski, S., Zagrodzka, Z. B., Garlovsky, M. D., Pal, A., Shipilina, D., Garcia Castillo, D. F.,https://doi.org/10.1126/science.adi2982__Butlin, R. K. (2024). The genetic basis of a recent transition to live-bearing in marine snails. Science. American Association for the Advancement of Science.https://doi.org/10.1126/science.adi2982 
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Hledik, M. (2024). Genetic information and biological optimization. Institute of Science and Technology Austria.https://doi.org/10.15479/at:ista:15020 
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Johannesson, K., Faria, R., Le Moan, A., Rafajlovi, M., Westram, A. M., Butlin, R. K., &; Stankowski, S. (2024). Diverse pathways to speciation revealed by marine snails. Trends in Genetics. Cell Press.https://doi.org/10.1016/j.tig.2024.01.002 
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Olusanya, O. O. (2024). Local adaptation, genetic load and extinction in metapopulations. Institute of Science and Technology Austria.https://doi.org/10.15479/at:ista:14711 
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De Jode, A., Le Moan, A., Johannesson, K., Faria, R., Stankowski, S., Westram, A. M.,https://doi.org/10.1111/eva.13428__Fraisse, C. (2023). Ten years of demographic modelling of divergence and speciation in the sea. Evolutionary Applications. Wiley.https://doi.org/10.1111/eva.13428 
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Bolnick, D. I., Hund, A. K., Nosil, P., Peng, F., Ravinet, M., Stankowski, S.,https://doi.org/10.1093/evolut/qpac004__Yukilevich, R. (2023). A multivariate view of the speciation continuum. Evolution: International Journal of Organic Evolution. Oxford University Press.https://doi.org/10.1093/evolut/qpac004 
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Shipilina, D., Pal, A., Stankowski, S., Chan, Y. F., &; Barton, N. H. (2023). On the origin and structure of haplotype blocks. Molecular Ecology. Wiley.https://doi.org/10.1111/mec.16793 
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Barton, N. H., Etheridge, A. M., &; Véber, A. (2023). The infinitesimal model with dominance. Genetics. Oxford Academic.https://doi.org/10.1093/genetics/iyad133 
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Barton, N. H. (2023). The infinitesimal model with dominance. Institute of Science and Technology Austria.https://doi.org/10.15479/AT:ISTA:12949 
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Berdan, E. L., Barton, N. H., Butlin, R., Charlesworth, B., Faria, R., Fragata, I.,https://doi.org/10.1111/jeb.14242__Flatt, T. (2023). How chromosomal inversions reorient the evolutionary process. Journal of Evolutionary Biology. Wiley.https://doi.org/10.1111/jeb.14242 
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Robinson, M. L., Hahn, P. G., Inouye, B. D., Underwood, N., Whitehead, S. R., Abbott, K. C.,https://doi.org/10.1126/science.adh8830__Wetzel, W. C. (2023). Plant size, latitude, and phylogeny explain within-population variability in herbivory. Science. AAAS.https://doi.org/10.1126/science.adh8830 
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Wetzel, W. (2023). HerbVar-Network/HV-Large-Patterns-MS-public: .0.0. Zenodo.https://doi.org/10.5281/ZENODO.8133117 
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Puixeu Sala, G. (2023). The molecular basis of sexual dimorphism: Experimental and theoretical characterization of phenotypic, transcriptomic and genetic patterns of sex-specific adaptation. Institute of Science and Technology Austria.https://doi.org/10.15479/at:ista:14058 
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Puixeu Sala, G., Macon, A., &; Vicoso, B. (2023). Sex-specific estimation of cis and trans regulation of gene expression in heads and gonads of Drosophila melanogaster. : Genes, Genomes, Genetics. Oxford University Press.https://doi.org/10.1093/g3journal/jkad121 
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Puixeu Sala, G. (2023). Data from: Sex-specific estimation of cis and trans regulation of gene expression in heads and gonads of Drosophila melanogaster. Institute of Science and Technology Austria.https://doi.org/10.15479/AT:ISTA:12933 
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Reeve, J., Butlin, R. K., Koch, E. L., Stankowski, S., &; Faria, R. (2023). Chromosomal inversion polymorphisms are widespread across the species ranges of rough periwinkles (Littorina saxatilis and L. arcana). Molecular Ecology. Wiley.https://doi.org/10.1111/mec.17160 
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Arathoon, L. S. (2023). Investigating inbreeding depression and the self-incompatibility locus of Antirrhinum majus. Institute of Science and Technology Austria.https://doi.org/10.15479/at:ista:14651 
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Lucek, K., Giménez, M. D., Joron, M., Rafajlovi, M., Searle, J. B., Walden, N.,https://doi.org/10.1101/cshperspect.a041447__Faria, R. (2023). The impact of chromosomal rearrangements in speciation: From micro- to macroevolution. Cold Spring Harbor Perspectives in Biology. Cold Spring Harbor Laboratory.https://doi.org/10.1101/cshperspect.a041447 
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Stankowski, S., Chase, M. A., McIntosh, H., &; Streisfeld, M. A. (2023). Integrating topdown and bottomup approaches to understand the genetic architecture of speciation across a monkeyflower hybrid zone. Molecular Ecology. Wiley.https://doi.org/10.1111/mec.16849 
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Stankowski, S. (2023). Data and code for: The genetic architecture of a recent transition to live-bearing in marine snails. Zenodo.https://doi.org/10.5281/ZENODO.8318995 
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Olusanya, O. O., Khudiakova, K., &; Sachdeva, H. (n.d.). Genetic load, eco-evolutionary feedback and extinction in a metapopulation. bioRxiv.https://doi.org/10.1101/2023.12.02.569702 
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Stankowski, S., Zagrodzka, Z. B., Galindo, J., Montaño-Rendón, M., Faria, R., Mikhailova, N.,https://doi.org/10.1093/evolinnean/kzad002__Butlin, R. K. (2023). Whole-genome phylogeography of the intertidal snail Littorina saxatilis. Evolutionary Journal of the Linnean Society. Oxford University Press.https://doi.org/10.1093/evolinnean/kzad002 
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Julseth, M. (2023). The effect of local population structure on genetic variation at selected loci in the A. majus hybrid zone. Institute of Science and Technology Austria.https://doi.org/10.15479/at:ista:12800 
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Barton, N. H. (2022). The “New Synthesis.”https://doi.org/10.1073/pnas.2122147119__Proceedings of the National Academy of Sciences of the United States of America. Proceedings of the National Academy of Sciences.https://doi.org/10.1073/pnas.2122147119 
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Matejovicova, L. (2022). Genetic basis of flower colour as a model for adaptive evolution. Institute of Science and Technology Austria.https://doi.org/10.15479/at:ista:11128 
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Turelli, M., &; Barton, N. H. (2022). Why did the Wolbachia transinfection cross the road? Drift, deterministic dynamics, and disease control. Evolution Letters. Wiley.https://doi.org/10.1002/evl3.270 
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Turelli, M., &; Barton, N. H. (2022). Wolbachia frequency data from: Why did the Wolbachia transinfection cross the road? Drift, deterministic dynamics and disease control. Dryad.https://doi.org/10.25338/B81931 
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Lagator, M., Sarikas, S., Steinrueck, M., Toledo-Aparicio, D., Bollback, J. P., Guet, C. C., &; Tkadik, G. (2022). Predicting bacterial promoter function and evolution from random sequences. ELife. eLife Sciences Publications.https://doi.org/10.7554/eLife.64543 
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PMID: 35080492

Freitas, S., Westram, A. M., Schwander, T., Arakelyan, M., Ilgaz, Ç., Kumlutas, Y.,https://doi.org/10.1111/evo.14462__Butlin, R. K. (2022). Parthenogenesis in Darevskia lizards: A rare outcome of common hybridization, not a common outcome of rare hybridization. Evolution. Wiley.https://doi.org/10.1111/evo.14462 
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Saona Urmeneta, R. J., Kondrashov, F., &; Khudiakova, K. (2022). Relation between the number of peaks and the number of reciprocal sign epistatic interactions. Bulletin of Mathematical Biology. Springer Nature.https://doi.org/10.1007/s11538-022-01029-z 
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Westram, A. M., Faria, R., Johannesson, K., Butlin, R., &; Barton, N. H. (2022). Inversions and parallel evolution. Philosophical Transactions of the Royal Society B: Biological Sciences. Royal Society of London.https://doi.org/10.1098/rstb.2021.0203 
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Szep, E., Trubenova, B., &; Csilléry, K. (2022). Using gridCoal to assess whether standard population genetic theory holds in the presence of spatio-temporal heterogeneity in population size. Molecular Ecology Resources. Wiley.https://doi.org/10.1111/1755-0998.13676 
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Hearn, K. E., Koch, E. L., Stankowski, S., Butlin, R. K., Faria, R., Johannesson, K., &; Westram, A. M. (2022). Differing associations between sex determination and sex-linked inversions in two ecotypes of Littorina saxatilis. Evolution Letters. Oxford Academic.https://doi.org/10.1002/evl3.295 
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Hayward, L., &; Sella, G. (2022). Polygenic adaptation after a sudden change in environment. ELife. eLife Sciences Publications.https://doi.org/10.7554/elife.66697 
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Westram, A. M., &; Butlin, R. (2022). Professor Kerstin Johannesson–winner of the 2022 Molecular Ecology Prize. Molecular Ecology. Wiley.https://doi.org/10.1111/mec.16779 
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Stankowski, S. (2022). Digest: On the origin of a possible hybrid species. Evolution. Wiley.https://doi.org/10.1111/evo.14632 
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Koch, E. L., Ravinet, M., Westram, A. M., Johannesson, K., &; Butlin, R. K. (2022). Genetic architecture of repeated phenotypic divergence in Littorina saxatilis evolution. Evolution. Wiley.https://doi.org/10.1111/evo.14602 
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Koch, E., Ravinet, M., Westram, A. M., Jonannesson, K., &; Butlin, R. (2022). Data from: Genetic architecture of repeated phenotypic divergence in Littorina saxatilis ecotype evolution. Dryad.https://doi.org/10.5061/DRYAD.M905QFV4B 
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Westram, A. M., Stankowski, S., Surendranadh, P., &; Barton, N. H. (2022). What is reproductive isolation? Journal of Evolutionary Biology. Wiley.https://doi.org/10.1111/jeb.14005 
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Westram, A. M., Stankowski, S., Surendranadh, P., &; Barton, N. H. (2022). Reproductive isolation, speciation, and the value of disagreement: A reply to the commentaries on ‘What is reproductive isolation?’ Journal of Evolutionary Biology. Wiley.https://doi.org/10.1111/jeb.14082 
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Surendranadh, P., Arathoon, L. S., Baskett, C., Field, D., Pickup, M., &; Barton, N. H. (2022). Effects of fine-scale population structure on the distribution of heterozygosity in a long-term study of Antirrhinum majus. Genetics. Oxford University Press.https://doi.org/10.1093/genetics/iyac083 
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Surendranadh, P., Arathoon, L. S., Baskett, C., Field, D., Pickup, M., &; Barton, N. H. (2022). Effects of fine-scale population structure on the distribution of heterozygosity in a long-term study of Antirrhinum majus. Institute of Science and Technology Austria.https://doi.org/10.15479/at:ista:11321 
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Hledik, M., Barton, N. H., &; Tkadik, G. (2022). Accumulation and maintenance of information in evolution. Proceedings of the National Academy of Sciences. Proceedings of the National Academy of Sciences.https://doi.org/10.1073/pnas.2123152119 
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Barton, N. H., &; Olusanya, O. O. (2022). The response of a metapopulation to a changing environment. Philosophical Transactions of the Royal Society B: Biological Sciences. The Royal Society.https://doi.org/10.1098/rstb.2021.0009 
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Sachdeva, H., Olusanya, O. O., &; Barton, N. H. (2022). Genetic load and extinction in peripheral populations: The roles of migration, drift and demographic stochasticity. Philosophical Transactions of the Royal Society B. The Royal Society.https://doi.org/10.1098/rstb.2021.0010 
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Belohlavy, S. (2022). The genetic basis of complex traits studied via analysis of evolve and resequence experiments. Institute of Science and Technology Austria.https://doi.org/10.15479/at:ista:11388 
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Bodova, K., Szep, E., &; Barton, N. H. (2021). Dynamic maximum entropy provides accurate approximation of structured population dynamics. PLoS Computational Biology. Public Library of Science.https://doi.org/10.1371/journal.pcbi.1009661 
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PMID: 34851948
arXiv: 2102.03669

Simon, A., Fraisse, C., El Ayari, T., LiautardHaag, C., Strelkov, P., Welch, J. J., &; Bierne, N. (2021). How do species barriers decay? Concordance and local introgression in mosaic hybrid zones of mussels. Journal of Evolutionary Biology. Wiley.https://doi.org/10.1111/jeb.13709 
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Salces-Castellano, A., Stankowski, S., Arribas, P., Patino, J., Karger, D. N., Butlin, R., &; Emerson, B. C. (2021). Long-term cloud forest response to climate warming revealed by insect speciation history. Evolution. Wiley.https://doi.org/10.1111/evo.14111 
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Arnoux, S., Fraisse, C., &; Sauvage, C. (2021). Genomic inference of complex domestication histories in three Solanaceae species. Journal of Evolutionary Biology. Wiley.https://doi.org/10.1111/jeb.13723 
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Faria, R., Johannesson, K., &; Stankowski, S. (2021). Speciation in marine environments: Diving under the surface. Journal of Evolutionary Biology. Wiley.https://doi.org/10.1111/jeb.13756 
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Fraisse, C., &; Sachdeva, H. (2021). The rates of introgression and barriers to genetic exchange between hybridizing species: Sex chromosomes vs autosomes. Genetics. Genetics Society of America.https://doi.org/10.1093/genetics/iyaa025 
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Fraisse, C., Popovic, I., Mazoyer, C., Spataro, B., Delmotte, S., Romiguier, J.,https://doi.org/10.1111/1755-0998.13323__Roux, C. (2021). DILS: Demographic inferences with linked selection by using ABC. Molecular Ecology Resources. Wiley.https://doi.org/10.1111/1755-0998.13323 
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Meier, J. I., Salazar, P. A., Kudka, M., Davies, R. W., Dréau, A., Aldás, I.,https://doi.org/10.1073/pnas.2015005118__Chan, Y. F. (2021). Haplotype tagging reveals parallel formation of hybrid races in two butterfly species. PNAS. Proceedings of the National Academy of Sciences.https://doi.org/10.1073/pnas.2015005118 
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Koch, E. L., Morales, H. E., Larsson, J., Westram, A. M., Faria, R., Lemmon, A. R.,https://doi.org/10.1002/evl3.227__Butlin, R. K. (2021). Genetic variation for adaptive traits is associated with polymorphic inversions in Littorina saxatilis. Evolution Letters. Wiley.https://doi.org/10.1002/evl3.227 
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Stankowski, S., &; Ravinet, M. (2021). Quantifying the use of species concepts. Current Biology. Cell Press.https://doi.org/10.1016/j.cub.2021.03.060 
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Koch, E., Morales, H. E., Larsson, J., Westram, A. M., Faria, R., Lemmon, A. R.,https://doi.org/10.5061/DRYAD.ZGMSBCCB4__Butlin, R. K. (2021). Data from: Genetic variation for adaptive traits is associated with polymorphic inversions in Littorina saxatilis. Dryad.https://doi.org/10.5061/DRYAD.ZGMSBCCB4 
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Lagator, M., Uecker, H., &; Neve, P. (2021). Adaptation at different points along antibiotic concentration gradients. Biology Letters. Royal Society of London.https://doi.org/10.1098/rsbl.2020.0913 
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Berdan, E. L., Blanckaert, A., Slotte, T., Suh, A., Westram, A. M., &; Fragata, I. (2021). Unboxing mutations: Connecting mutation types with evolutionary consequences. Molecular Ecology. Wiley.https://doi.org/10.1111/mec.15936 
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Hledik, M., Polechova, J., Beiglböck, M., Herdina, A. N., Strassl, R., &; Posch, M. (2021). Analysis of the specificity of a COVID-19 antigen test in the Slovak mass testing program. PLoS ONE. Public Library of Science.https://doi.org/10.1371/journal.pone.0255267 
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Szep, E., Sachdeva, H., &; Barton, N. H. (2021). Polygenic local adaptation in metapopulations: A stochastic ecoevolutionary model. Evolution. Wiley.https://doi.org/10.1111/evo.14210 
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Butlin, R. K., Servedio, M. R., Smadja, C. M., Bank, C., Barton, N. H., Flaxman, S. M.,https://doi.org/10.1111/evo.14235__Qvarnström, A. (2021). Homage to Felsenstein 1981, or why are there so few/many species? Evolution. Wiley.https://doi.org/10.1111/evo.14235 
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Szep, E., Sachdeva, H., &; Barton, N. H. (2021). Supplementary code for: Polygenic local adaptation in metapopulations: A stochastic eco-evolutionary model. Dryad.https://doi.org/10.5061/DRYAD.8GTHT76P1 
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Stankowski, S., &; Ravinet, M. (2021). Defining the speciation continuum. Evolution. Oxford University Press.https://doi.org/10.1111/evo.14215 
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