K. Eguchi, E. Le Monnier, and R. Shigemoto, “Nanoscale phosphoinositide distribution on cell membranes of mouse cerebellar neurons,” The Journal of Neuroscience, vol. 43, no. 23. Society for Neuroscience, pp. 4197–4216, 2023.
LibreCat: https://research-explorer.ista.ac.at/record/13202
DOI: 10.1523/JNEUROSCI.1514-22.2023
WoS: 001020132100005
PMID: 37160366

J. G. Danzl, “Research data for the publication ‘Imaging brain tissue architecture across millimeter to nanometer scales.’” Institute of Science and Technology Austria, 2023.
LibreCat: https://research-explorer.ista.ac.at/record/13126
DOI: 10.15479/AT:ISTA:13126

J. M. Michalska et al., “Imaging brain tissue architecture across millimeter to nanometer scales,” Nature Biotechnology. Springer Nature, 2023.
LibreCat: https://research-explorer.ista.ac.at/record/14257
DOI: 10.1038/s41587-023-01911-8
WoS: 001065254200001

R. Shigemoto, “Transition from tonic to phasic neurotransmitter release by presynaptic GABAB receptor activation in medial habenula terminals.” Institute of Science and Technology Austria, 2023.
LibreCat: https://research-explorer.ista.ac.at/record/13173
DOI: 10.15479/AT:ISTA:13173

C. Alcarva, “Plasticity in the cerebellum: What molecular mechanisms are behind physiological learning,” Institute of Science and Technology Austria, 2023.
LibreCat: https://research-explorer.ista.ac.at/record/12809
DOI: 10.15479/at:ista:12809

K. Eguchi, J.-C. Montanaro-Punzengruber, E. Le Monnier, and R. Shigemoto, “The number and distinct clustering patterns of voltage-gated Calcium channels in nerve terminals,” Frontiers in Neuroanatomy, vol. 16. Frontiers, 2022.
LibreCat: https://research-explorer.ista.ac.at/record/10890
DOI: 10.3389/fnana.2022.846615
WoS: 000766662700001
PMID: 35280978

R. Shigemoto, “Electron microscopic visualization of single molecules by tag-mediated metal particle labeling,” Microscopy, vol. 71, no. Supplement_1. Oxford Academic, pp. i72–i80, 2022.
LibreCat: https://research-explorer.ista.ac.at/record/10889
DOI: 10.1093/jmicro/dfab048
WoS: 000768384100011
PMID: 35275179

T. Hori et al., “Microtubule assembly by tau impairs endocytosis and neurotransmission via dynamin sequestration in Alzheimer’s disease synapse model,” eLife, vol. 11. eLife Sciences Publications, 2022.
LibreCat: https://research-explorer.ista.ac.at/record/11419
DOI: 10.7554/eLife.73542
WoS: 000876231600001
PMID: 35471147 

A. Martín-Belmonte et al., “Nanoscale alterations in GABAB receptors and GIRK channel organization on the hippocampus of APP/P mice,” Alzheimer’s Research &; Therapy, vol. 14. Springer Nature, 2022.
LibreCat: https://research-explorer.ista.ac.at/record/12212
DOI: 10.1186/s13195-022-01078-5
WoS: 000857985500001

S. Thayyil et al., “Dynamic control of microbial movement by photoswitchable ATP antagonists,” Chemistry - A European Journal, vol. 28, no. 30. Wiley, 2022.
LibreCat: https://research-explorer.ista.ac.at/record/11333
DOI: 10.1002/chem.202200807
WoS: 000781658800001
PMID: 35332959

M. Jevtic, “Contextual fear learning induced changes in AMPA receptor subtypes along the proximodistal axis in dorsal hippocampus,” Institute of Science and Technology Austria, 2022.
LibreCat: https://research-explorer.ista.ac.at/record/11393
DOI: 10.15479/at:ista:11393

F. A. Fredes Tolorza, M. A. Silva Sifuentes, P. Koppensteiner, K. Kobayashi, M. A. Jösch, and R. Shigemoto, “Ventro-dorsal hippocampal pathway gates novelty-induced contextual memory formation,” Current Biology, vol. 31, no. 1. Elsevier, p. –38., 2021.
LibreCat: https://research-explorer.ista.ac.at/record/7551
DOI: 10.1016/j.cub.2020.09.074
WoS: 000614361000020

C. L. Schöpf et al., “Presynaptic ;12;4 subunits are key organizers of glutamatergic synapses,” PNAS, vol. 118, no. 14. National Academy of Sciences, 2021.
LibreCat: https://research-explorer.ista.ac.at/record/9330
DOI: 10.1073/pnas.1920827118
WoS: 000637398300002

F. Fredes and R. Shigemoto, “The role of hippocampal mossy cells in novelty detection,” Neurobiology of Learning and Memory, vol. 183. Elsevier, 2021.
LibreCat: https://research-explorer.ista.ac.at/record/9641
DOI: 10.1016/j.nlm.2021.107486
WoS: 000677694900004
PMID: 34214666

T. Butola et al., “RIM-binding protein 2 organizes Ca<sup>21</sup> channel topography and regulates release probability and vesicle replenishment at a fast central synapse,” Journal of Neuroscience, vol. 41, no. 37. Society for Neuroscience, pp. 7742–7767, 2021.
LibreCat: https://research-explorer.ista.ac.at/record/10051
DOI: 10.1523/JNEUROSCI.0586-21.2021
WoS: 000752287700005
PMID: 34353898

C. Biane et al., “Developmental emergence of two-stage nonlinear synaptic integration in cerebellar interneurons,” eLife, vol. 10. eLife Sciences Publications, 2021.
LibreCat: https://research-explorer.ista.ac.at/record/10403
DOI: 10.7554/eLife.65954
WoS: 000715789500001

P. Bhandari et al., “GABAB receptor auxiliary subunits modulate Ca.3-mediated release from medial habenula terminals,” eLife, vol. 10. eLife Sciences Publications, 2021.
LibreCat: https://research-explorer.ista.ac.at/record/9437
DOI: 10.7554/ELIFE.68274
WoS: 000651761700001

D. Kleindienst, “B or not 2B: Hippocampal asymmetries mediated by NMDA receptor subunit GluN2B C-terminus and high-throughput image analysis by Deep-Learning,” Institute of Science and Technology Austria, 2021.
LibreCat: https://research-explorer.ista.ac.at/record/9562
DOI: 10.15479/at:ista:9562

W. Kaufmann, D. Kleindienst, H. Harada, and R. Shigemoto, “High-Resolution localization and quantitation of membrane proteins by SDS-digested freeze-fracture replica labeling (SDS-FRL),” in  Receptor and Ion Channel Detection in the Brain, vol. 169, New York: Humana, 2021, pp. 267–283.
LibreCat: https://research-explorer.ista.ac.at/record/9756
DOI: 10.1007/978-1-0716-1522-5_19

C. Nakamoto et al., “Expression mapping, quantification, and complex formation of Glu and Glu glutamate receptors in adult mouse brain,” Journal of Comparative Neurology, vol. 528, no. 6. Wiley, pp. 1003–1027, 2020.
LibreCat: https://research-explorer.ista.ac.at/record/7148
DOI: 10.1002/cne.24792
WoS: 000496410200001
PMID: 31625608

L. Piriya Ananda Babu, H. Y. Wang, K. Eguchi, L. Guillaud, and T. Takahashi, “Microtubule and actin differentially regulate synaptic vesicle cycling to maintain high-frequency neurotransmission,” Journal of neuroscience, vol. 40, no. 1. Society for Neuroscience, pp. 131–142, 2020.
LibreCat: https://research-explorer.ista.ac.at/record/7339
DOI: 10.1523/JNEUROSCI.1571-19.2019
WoS: 000505167600013
PMID: 31767677

A. Martín-Belmonte et al., “Density of GABAB receptors is reduced in granule cells of the hippocampus in a mouse model of Alzheimer’s disease,” International journal of molecular sciences, vol. 21, no. 7. MDPI, 2020.
LibreCat: https://research-explorer.ista.ac.at/record/7664
DOI: 10.3390/ijms21072459
WoS: 000535574200201
PMID: 32252271

K. Eguchi et al., “Advantages of acute brain slices prepared at physiological temperature in the characterization of synaptic functions,” Frontiers in Cellular Neuroscience, vol. 14. Frontiers Media, 2020.
LibreCat: https://research-explorer.ista.ac.at/record/7665
DOI: 10.3389/fncel.2020.00063
WoS: 000525582200001

J. Bao et al., “Synergism of type 1 metabotropic and ionotropic glutamate receptors in cerebellar molecular layer interneurons in vivo,” eLife, vol. 9. eLife Sciences Publications, 2020.
LibreCat: https://research-explorer.ista.ac.at/record/7878
DOI: 10.7554/eLife.56839
WoS: 000535191600001
PMID: 32401196

H. Y. Wang, K. Eguchi, T. Yamashita, and T. Takahashi, “Frequency-dependent block of excitatory neurotransmission by isoflurane via dual presynaptic mechanisms,” Journal of Neuroscience, vol. 40, no. 21. Society for Neuroscience, pp. 4103–4115, 2020.
LibreCat: https://research-explorer.ista.ac.at/record/7908
DOI: 10.1523/JNEUROSCI.2946-19.2020
WoS: 000535694700004

A. Martín-Belmonte et al., “Reduction in the neuronal surface of post and presynaptic GABA&;B&; receptors in the hippocampus in a mouse model of Alzheimer’s disease,” Brain Pathology, vol. 30, no. 3. Wiley, pp. 554–575, 2020.
LibreCat: https://research-explorer.ista.ac.at/record/7207
DOI: 10.1111/bpa.12802
WoS: 000502270900001
PMID: 31729777

P. Bhandari, “Localization and functional role of Ca.3 in the medial habenula to interpeduncular nucleus pathway,” Institute of Science and Technology Austria, 2020.
LibreCat: https://research-explorer.ista.ac.at/record/7525
DOI: 10.15479/AT:ISTA:7525

D. Kleindienst, J.-C. Montanaro-Punzengruber, P. Bhandari, M. J. Case, Y. Fukazawa, and R. Shigemoto, “Deep learning-assisted high-throughput analysis of freeze-fracture replica images applied to glutamate receptors and calcium channels at hippocampal synapses,” International Journal of Molecular Sciences, vol. 21, no. 18. MDPI, 2020.
LibreCat: https://research-explorer.ista.ac.at/record/8532
DOI: 10.3390/ijms21186737
WoS: 000579945300001

N. Zenmyo et al., “Optimized reaction pair of the CysHis tag and Ni(II)-NTA probe for highly selective chemical labeling of membrane proteins,” Bulletin of the Chemical Society of Japan, vol. 92, no. 5. Bulletin of the Chemical Society of Japan, pp. 995–1000, 2019.
LibreCat: https://research-explorer.ista.ac.at/record/6659
DOI: 10.1246/bcsj.20190034

N. Byczkowicz et al., “HCN channel-mediated neuromodulation can control action potential velocity and fidelity in central axons,” eLife, vol. 8. eLife Sciences Publications, 2019.
LibreCat: https://research-explorer.ista.ac.at/record/6868
DOI: 10.7554/eLife.42766
WoS: 000485663900001

Y. Kasugai et al., “Structural and functional remodeling of amygdala GABAergic synapses in associative fear learning,” Neuron, vol. 104, no. 4. Elsevier, p. 781–794.e4, 2019.
LibreCat: https://research-explorer.ista.ac.at/record/7099
DOI: 10.1016/j.neuron.2019.08.013
WoS: 000497963500017
PMID: 31543297

L. Klotz, O. Wendler, R. Frischknecht, R. Shigemoto, H. Schulze, and R. Enz, “Localization of group II and III metabotropic glutamate receptors at pre- and postsynaptic sites of inner hair cell ribbon synapses,” FASEB Journal, vol. 33, no. 12. FASEB, pp. 13734–13746, 2019.
LibreCat: https://research-explorer.ista.ac.at/record/7179
DOI: 10.1096/fj.201901543R
WoS: 000507466100054
PMID: 31585509

F. A. Erdem et al., “A comparison of the transport kinetics of glycine transporter 1 and glycine transporter 2,” The Journal of General Physiology, vol. 151, no. 8. Rockefeller University Press, pp. 1035–1050, 2019.
LibreCat: https://research-explorer.ista.ac.at/record/7398
DOI: 10.1085/jgp.201912318
WoS: 000478792500008
PMID: 31270129

S. Tabata et al., “Electron microscopic detection of single membrane proteins by a specific chemical labeling,” iScience, vol. 22, no. 12. Elsevier, pp. 256–268, 2019.
LibreCat: https://research-explorer.ista.ac.at/record/7391
DOI: 10.1016/j.isci.2019.11.025
WoS: :000504652000020
PMID: 31786521

D. Dimitrov, L. Guillaud, K. Eguchi, and T. Takahashi, “Culture of mouse giant central nervous system synapses and application for imaging and electrophysiological analyses,” in Neurotrophic Factors, vol. 1727, S. D. Skaper, Ed. Springer, 2018, pp. 201–215.
LibreCat: https://research-explorer.ista.ac.at/record/562
DOI: 10.1007/978-1-4939-7571-6_15
PMID: 29222783

R. Luján et al., “Sk2 channels associate with mGlu1;1 receptors and Ca.1 channels in Purkinje cells,” Frontiers in Cellular Neuroscience, vol. 12. Frontiers Media, 2018.
LibreCat: https://research-explorer.ista.ac.at/record/41
DOI: 10.3389/fncel.2018.00311
WoS: 000445090100002

K. Sawada, R. Kawakami, R. Shigemoto, and T. Nemoto, “Super resolution structural analysis of dendritic spines using three-dimensional structured illumination microscopy in cleared mouse brain slices,” European Journal of Neuroscience, vol. 47, no. 9. Wiley, pp. 1033–1042, 2018.
LibreCat: https://research-explorer.ista.ac.at/record/326
DOI: 10.1111/ejn.13901
WoS: 000431496400001

A. Miklosi et al., “Super resolution microscopical localization of dopamine receptors 1 and 2 in rat hippocampal synaptosomes,” Molecular Neurobiology, vol. 55, no. 6. Springer, pp. 4857 – 4869, 2018.
LibreCat: https://research-explorer.ista.ac.at/record/705
DOI: 10.1007/s12035-017-0688-y
WoS: 000431991500025

S. Reipert et al., “Agitation modules: Flexible means to accelerate automated freeze substitution,” Journal of Histochemistry and Cytochemistry, vol. 66, no. 12. SAGE Publications, pp. 903–921, 2018.
LibreCat: https://research-explorer.ista.ac.at/record/163
DOI: 10.1369/0022155418786698
WoS: 000452277700005
PMID: 29969056

M. J. Case, “From the left to the right: A tale of asymmetries, environments, and hippocampal development,” Institute of Science and Technology Austria, 2018.
LibreCat: https://research-explorer.ista.ac.at/record/51
DOI: 10.15479/AT:ISTA:th_1032

R. Luján et al., “Differential association of GABAB receptors with their effector ion channels in Purkinje cells,” Brain Structure and Function, vol. 223, no. 3. Springer, pp. 1565–1587, 2018.
LibreCat: https://research-explorer.ista.ac.at/record/612
DOI: 10.1007/s00429-017-1568-y
WoS: 000428419500030

W. Sun, M.-Z. Zhai, Q. Zhou, C. Qian, and C. Jiang, “Effects of B vitamins overload on plasma insulin level and hydrogen peroxide generation in rats,” Chinese Journal of Physiology, vol. 60, no. 4. Chinese Physiological Society, pp. 207–214, 2017.
LibreCat: https://research-explorer.ista.ac.at/record/643
DOI: 10.4077/CJP.2017.BAF469
PMID: 28847140

T. Miki et al., “Numbers of presynaptic C+ channel clusters match those of functionally defined vesicular docking sites in single central synapses,” PNAS, vol. 114, no. 26. National Academy of Sciences, pp. 46–55, 2017.
LibreCat: https://research-explorer.ista.ac.at/record/693
DOI: 10.1073/pnas.1704470114
PMID: 28607047

W. Sun et al., “Gene expression changes of thermo sensitive transient receptor potential channels in obese mice,” Cell Biology International, vol. 41, no. 8. Wiley-Blackwell, pp. 908–913, 2017.
LibreCat: https://research-explorer.ista.ac.at/record/709
DOI: 10.1002/cbin.10783

M. Rubio et al., “The number and distribution of AMPA receptor channels containing fast kinetic Glu and Glu subunits at auditory nerve synapses depend on the target cells,” Brain Structure and Function, vol. 222, no. 8. Springer, pp. 3375–3393, 2017.
LibreCat: https://research-explorer.ista.ac.at/record/736
DOI: 10.1007/s00429-017-1408-0
WoS: 000414761700002

R. Shigemoto and M. A. Jösch, “The genetic encoded toolbox for electron microscopy and connectomics,” WIREs Developmental Biology, vol. 6, no. 6. Wiley-Blackwell, 2017.
LibreCat: https://research-explorer.ista.ac.at/record/740
DOI: 10.1002/wdev.288
WoS: 000412827400005
PMID: 28800674

E. Aloisi et al., “Altered surface mGlu dynamics provoke synaptic NMDAR dysfunction and cognitive defects in Fmr1 knockout mice,” Nature Communications, vol. 8, no. 1. Nature Publishing Group, 2017.
LibreCat: https://research-explorer.ista.ac.at/record/746
DOI: 10.1038/s41467-017-01191-2
WoS: 000413571300004

W. Sun et al., “Comparison of the effects of nicotinic acid and nicotinamide degradation on plasma betaine and choline levels,” Clinical Nutrition, vol. 36, no. 4. Elsevier, pp. 1136–1142, 2017.
LibreCat: https://research-explorer.ista.ac.at/record/1146
DOI: 10.1016/j.clnu.2016.07.016

C. Jiang et al., “Dietary menthol-induced TRPM8 activation enhances WAT ‘browning’ and ameliorates diet-induced obesity,” Oncotarget, vol. 8, no. 43. Impact Journals, pp. 75114–75126, 2017.
LibreCat: https://research-explorer.ista.ac.at/record/627
DOI: 10.18632/oncotarget.20540

H. Ukai et al., “PirB regulates asymmetries in hippocampal circuitry,” PLoS One, vol. 12, no. 6. Public Library of Science, 2017.
LibreCat: https://research-explorer.ista.ac.at/record/682
DOI: 10.1371/journal.pone.0179377

S. Booker et al., “KCT auxiliary proteins modulate kinetics of GABAB receptor-mediated inhibition in Cholecystokinin-containing interneurons,” Cerebral Cortex, vol. 27, no. 3. Oxford University Press, pp. 2318–2334, 2016.
LibreCat: https://research-explorer.ista.ac.at/record/1083
DOI: 10.1093/cercor/bhw090

H. Matsuno, M. Kudoh, A. Watakabe, T. Yamamori, R. Shigemoto, and S. Nagao, “Distribution and structure of synapses on medial vestibular nuclear neurons targeted by cerebellar flocculus purkinje cells and vestibular nerve in mice: Light and electron microscopy studies,” PLoS One, vol. 11, no. 10. Public Library of Science, 2016.
LibreCat: https://research-explorer.ista.ac.at/record/1278
DOI: 10.1371/journal.pone.0164037

H. Harada and R. Shigemoto, “Immunogold protein localization on grid-glued freeze-fracture replicas,” in High-Resolution Imaging of Cellular Proteins, vol. 1474, Springer, 2016, pp. 203–216.
LibreCat: https://research-explorer.ista.ac.at/record/1094
DOI: 10.1007/978-1-4939-6352-2_12

Y. Nakamura et al., “Nanoscale distribution of presynaptic C+ channels and its impact on vesicular release during development,” Neuron, vol. 85, no. 1. Elsevier, pp. 145–158, 2015.
LibreCat: https://research-explorer.ista.ac.at/record/1546
DOI: 10.1016/j.neuron.2014.11.019

F. Javdani et al., “Differential expression patterns of K+Cl- cotransporter 2 in neurons within the superficial spinal dorsal horn of rats,” Journal of Comparative Neurology, vol. 523, no. 13. Wiley-Blackwell, pp. 1967–1983, 2015.
LibreCat: https://research-explorer.ista.ac.at/record/1557
DOI: 10.1002/cne.23774

M. Edamura et al., “Functional deficiency of MHC class i enhances LTP and abolishes LTD in the nucleus accumbens of mice,” PLoS One, vol. 9, no. 9. Public Library of Science, 2014.
LibreCat: https://research-explorer.ista.ac.at/record/1895
DOI: 10.1371/journal.pone.0107099

A. Ritzau Jost et al., “Ultrafast action potentials mediate kilohertz signaling at a central synapse,” Neuron, vol. 84, no. 1. Elsevier, pp. 152–163, 2014.
LibreCat: https://research-explorer.ista.ac.at/record/1898
DOI: 10.1016/j.neuron.2014.08.036

W. Wang et al., “Distinct cerebellar engrams in short-term and long-term motor learning,” PNAS, vol. 111, no. 1. National Academy of Sciences, pp. 8–3, 2014.
LibreCat: https://research-explorer.ista.ac.at/record/1920
DOI: 10.1073/pnas.1315541111

W. Aziz, W. Wang, S. Kesaf, A. Mohamed, Y. Fukazawa, and R. Shigemoto, “Distinct kinetics of synaptic structural plasticity, memory formation, and memory decay in massed and spaced learning,” PNAS, vol. 111, no. 1. National Academy of Sciences, pp. 4–2, 2014.
LibreCat: https://research-explorer.ista.ac.at/record/1919
DOI: 10.1073/pnas.1303317110

J. Hatakeyama, Y. Wakamatsu, A. Nagafuchi, R. Kageyama, R. Shigemoto, and K. Shimamura, “Cadherin-based adhesions in the apical endfoot are required for active Notch signaling to control neurogenesis in vertebrates,” Development, vol. 141, no. 8. Company of Biologists, pp. 1671–1682, 2014.
LibreCat: https://research-explorer.ista.ac.at/record/1933
DOI: 10.1242/dev.102988

H. Matsukawa et al., “Netrin-G/NGL complexes encode functional synaptic diversification,” Journal of Neuroscience, vol. 34, no. 47. Society for Neuroscience, pp. 15779–15792, 2014.
LibreCat: https://research-explorer.ista.ac.at/record/2018
DOI: 10.1523/JNEUROSCI.1141-14.2014
PMID: 25411505

M. Rubio, Y. Fukazawa, N. Kamasawa, C. Clarkson, E. Molnár, and R. Shigemoto, “Target- and input-dependent organization of AMPA and NMDA receptors in synaptic connections of the cochlear nucleus,” Journal of Comparative Neurology, vol. 522, no. 18. Wiley-Blackwell, pp. 4023–4042, 2014.
LibreCat: https://research-explorer.ista.ac.at/record/2064
DOI: 10.1002/cne.23654

K. Beppu et al., “Optogenetic countering of glial acidosis suppresses glial glutamate release and ischemic brain damage,” Neuron, vol. 81, no. 2. Elsevier, pp. 314–320, 2014.
LibreCat: https://research-explorer.ista.ac.at/record/2241
DOI: 10.1016/j.neuron.2013.11.011