Lukacisinova, Marta, Sebastian Novak, and Tiago Paixao. “Modelling and Simulation Details.”https://doi.org/10.1371/journal.pcbi.1005609.s001__Public Library of Science, 2017.https://doi.org/10.1371/journal.pcbi.1005609.s001 .

Lukacisinova, Marta, Sebastian Novak, and Tiago Paixao. “Extensions of the Model.”https://doi.org/10.1371/journal.pcbi.1005609.s002__Public Library of Science, 2017.https://doi.org/10.1371/journal.pcbi.1005609.s002 .

Lukacisinova, Marta, Sebastian Novak, and Tiago Paixao. “Heuristic Prediction for Multiple Stresses.”https://doi.org/10.1371/journal.pcbi.1005609.s003__Public Library of Science, 2017.https://doi.org/10.1371/journal.pcbi.1005609.s003 .

Lukacisinova, Marta, Sebastian Novak, and Tiago Paixao. “Resistance Frequencies for Different Combination Strategies.”https://doi.org/10.1371/journal.pcbi.1005609.s004__Public Library of Science, 2017.https://doi.org/10.1371/journal.pcbi.1005609.s004 .

Mitosch, Karin. “Timing, Variability and Cross-Protection in Bacteria – Insights from Dynamic Gene Expression Responses to Antibiotics.”https://doi.org/10.15479/AT:ISTA:th_862__Institute of Science and Technology Austria, 2017.https://doi.org/10.15479/AT:ISTA:th_862 .

Mitosch, Karin, Georg Rieckh, and Mark Tobias Bollenbach. “Noisy Response to Antibiotic Stress Predicts Subsequent Single Cell Survival in an Acidic Environment.”https://doi.org/10.1016/j.cels.2017.03.001__Cell Systems. Cell Press, 2017.https://doi.org/10.1016/j.cels.2017.03.001 .

Vos, Marjon de, Marcin P Zagórski, Alan Mcnally, and Mark Tobias Bollenbach. “Interaction Networks, Ecological Stability, and Collective Antibiotic Tolerance in Polymicrobial Infections.”https://doi.org/10.1073/pnas.1713372114__PNAS. National Academy of Sciences, 2017.https://doi.org/10.1073/pnas.1713372114 .

Lukacisin, Martin. “MATLAB Analysis Code for ‘Sequence-Specific Thermodynamic Properties of Nucleic Acids Influence Both Transcriptional Pausing and Backtracking in Yeast.’”https://doi.org/10.15479/AT:ISTA:64__Institute of Science and Technology Austria, 2017.https://doi.org/10.15479/AT:ISTA:64 .

Lukacisin, Martin, Matthieu Landon, and Rishi Jajoo. “Sequence-Specific Thermodynamic Properties of Nucleic Acids Influence Both Transcriptional Pausing and Backtracking in Yeast.”https://doi.org/10.1371/journal.pone.0174066__PLoS One. Public Library of Science, 2017.https://doi.org/10.1371/journal.pone.0174066 .

Lukacisinova, Marta, Sebastian Novak, and Tiago Paixao. “Stress Induced Mutagenesis: Stress Diversity Facilitates the Persistence of Mutator Genes.”https://doi.org/10.1371/journal.pcbi.1005609__PLoS Computational Biology. Public Library of Science, 2017.https://doi.org/10.1371/journal.pcbi.1005609 .

Lukacisinova, Marta, and Mark Tobias Bollenbach. “Toward a Quantitative Understanding of Antibiotic Resistance Evolution.”https://doi.org/10.1016/j.copbio.2017.02.013__Current Opinion in Biotechnology. Elsevier, 2017.https://doi.org/10.1016/j.copbio.2017.02.013 .

Schwarz, Jan, Veronika Bierbaum, Jack Merrin, Tino Frank, Robert Hauschild, Mark Tobias Bollenbach, Savaf Tay, Michael K Sixt, and Matthias Mehling. “A Microfluidic Device for Measuring Cell Migration towards Substrate Bound and Soluble Chemokine Gradients.”https://doi.org/10.1038/srep36440__Scientific Reports. Nature Publishing Group, 2016.https://doi.org/10.1038/srep36440 .

Angermayr, Andreas, Pascal Van Alphen, Dicle Hasdemir, Gertjan Kramer, Muzamal Iqbal, Wilmar Van Grondelle, Huub Hoefsloot, Younghae Choi, and Klaas Hellingwerf. “Culturing Synechocystis Sp. Strain Pcc 6803 with N2 and CO2 in a Diel Regime Reveals Multiphase Glycogen Dynamics with Low Maintenance Costs.”https://doi.org/10.1128/AEM.00256-16__Applied and Environmental Microbiology. American Society for Microbiology, 2016.https://doi.org/10.1128/AEM.00256-16 .

Qi, Qin, Macarena Toll Riera, Karl Heilbron, Gail Preston, and R Craig Maclean. “The Genomic Basis of Adaptation to the Fitness Cost of Rifampicin Resistance in Pseudomonas Aeruginosa.”https://doi.org/10.1098/rspb.2015.2452__Proceedings of the Royal Society of London Series B Biological Sciences. Royal Society, The, 2016.https://doi.org/10.1098/rspb.2015.2452 .

Lukacisin, Martin, Matthieu Landon, and Rishi Jajoo. “MATLAB Analysis Code for ‘Sequence-Specific Thermodynamic Properties of Nucleic Acids Influence Both Transcriptional Pausing and Backtracking in Yeast.’”https://doi.org/10.15479/AT:ISTA:45__Institute of Science and Technology Austria, 2016.https://doi.org/10.15479/AT:ISTA:45 .

Vos, Marjon de, Alexandre Dawid, Vanda Sunderlíková, and Sander Tans. “Breaking Evolutionary Constraint with a Tradeoff Ratchet.”https://doi.org/10.1073/pnas.1510282112__PNAS. National Academy of Sciences, 2015.https://doi.org/10.1073/pnas.1510282112 .

Bollenbach, Mark Tobias, and Carl-Philipp J Heisenberg. “Gradients Are Shaping Up.”https://doi.org/10.1016/j.cell.2015.04.009__Cell. Cell Press, 2015.https://doi.org/10.1016/j.cell.2015.04.009 .

Angermayr, Andreas, Aleix Gorchs, and Klaas Hellingwerf. “Metabolic Engineering of Cyanobacteria for the Synthesis of Commodity Products.”https://doi.org/10.1016/j.tibtech.2015.03.009__Trends in Biotechnology. Elsevier, 2015.https://doi.org/10.1016/j.tibtech.2015.03.009 .

Hammar, Petter, Andreas Angermayr, Staffan Sjostrom, Josefin Van Der Meer, Klaas Hellingwerf, Elton Hudson, and Hakaan Joensson. “Single-Cell Screening of Photosynthetic Growth and Lactate Production by Cyanobacteria.”https://doi.org/10.1186/s13068-015-0380-2__Biotechnology for Biofuels. BioMed Central, 2015.https://doi.org/10.1186/s13068-015-0380-2 .

Bollenbach, Mark Tobias. “Antimicrobial Interactions: Mechanisms and Implications for Drug Discovery and Resistance Evolution.”https://doi.org/10.1016/j.mib.2015.05.008__Current Opinion in Microbiology. Elsevier, 2015.https://doi.org/10.1016/j.mib.2015.05.008 .