Balancing complexity, performance and plausibility to meta learn plasticity rules in recurrent spiking networks
B.J. Confavreux, E.J. Agnes, F. Zenke, H. Sprekeler, T.P. Vogels, PLoS Computational Biology 21 (2025).

Colonization times in Moran process on graphs
L. Kopfová, J. Tkadlec, PLoS Computational Biology 21 (2025) e1012868.

kCSD-python, reliable current source density estimation with quality control
C. Chintaluri, M. Bejtka, W. Sredniawa, M. Czerwinski, J.M. Dzik, J. Jedrzejewska-Szmek, D.K. Wojciki, PLoS Computational Biology 20 (2024).

Amplifiers of selection for the Moran process with both Birth-death and death-Birth updating
J. Svoboda, S.S. Joshi, J. Tkadlec, K. Chatterjee, PLoS Computational Biology 20 (2024).

Dynamics of morphogen source formation in a growing tissue
R.D.J.G. Ho, K. Kishi, M. Majka, A. Kicheva, M.P. Zagórski, PLoS Computational Biology 20 (2024).

Environmental dynamics shape perceptual decision bias
J.A. Charlton, W.F. Mlynarski, Y.H. Bai, A.M. Hermundstad, R.L.T. Goris, PLoS Computational Biology 19 (2023).

Uncovering the organization of neural circuits with Generalized Phase Locking Analysis
S. Safavi, T.I. Panagiotaropoulos, V. Kapoor, J.F. Ramirez Villegas, N.K. Logothetis, M. Besserve, PLoS Computational Biology 19 (2023).

Direct reciprocity between individuals that use different strategy spaces
L. Schmid, C. Hilbe, K. Chatterjee, M. Nowak, PLOS Computational Biology 18 (2022).

Regimes and mechanisms of transient amplification in abstract and biological neural networks
G. Christodoulou, T.P. Vogels, E.J. Agnes, PLoS Computational Biology 18 (2022).

Parameter inference for stochastic biochemical models from perturbation experiments parallelised at the single cell level
A. Davidovi, R.P. Chait, G. Batt, J. Ruess, PLoS Computational Biology 18 (2022).

Dynamic maximum entropy provides accurate approximation of structured population dynamics
K. Bodova, E. Szep, N.H. Barton, PLoS Computational Biology 17 (2021).

Mistakes can stabilise the dynamics of rock-paper-scissors games
M. Kleshnina, S.S. Streipert, J.A. Filar, K. Chatterjee, PLoS Computational Biology 17 (2021).

Ten simple rules to improve academic work- life balance
M.J. Bartlett, F.N. Arslan, A. Bankston, S. Sarabipour, PLoS Computational Biology 17 (2021).

The Moran process on 2-chromatic graphs
K. Kaveh, A. McAvoy, K. Chatterjee, M.A. Nowak, PLOS Computational Biology 16 (2020).

Molecular noise of innate immunity shapes bacteria-phage ecologies
J. Ruess, M. Pleska, C.C. Guet, G. Tkadik, PLoS Computational Biology 15 (2019).