POMDPs under probabilistic semantics
K. Chatterjee, M. Chmelik, Artificial Intelligence 221 (2015) 46–72.
LibreCat: https://research-explorer.ista.ac.at/record/1873
DOI: 10.1016/j.artint.2014.12.009
arXiv: 1408.2058

Developing 3D SEM in a broad biological context
A. Kremer, S. Lippens, S. Bartunkova, B. Asselbergh, C. Blanpain, M. Fendrych, A. Goossens, M. Holt, S. Janssens, M. Krols, J. Larsimont, C. Mc Guire, M. Nowack, X. Saelens, A. Schertel, B. Schepens, M. Slezak, V. Timmerman, C. Theunis, R. Van Brempt, Y. Visser, C. Guérin, Journal of Microscopy 259 (2015) 80–96.
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Superfluid behavior of a Bose-Einstein condensate in a random potential
M. Könenberg, T. Moser, R. Seiringer, J. Yngvason, New Journal of Physics 17 (2015).
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Compositionality for quantitative specifications
U. Fahrenberg, J. Kretinsky, A. Legay, L. Traonouez, in:, Springer, 2015, pp. 306–324.
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Anomalous scaling in an age-dependent branching model
S. Keller-Schmidt, M. Tugrul, V. Eguíluz, E. Hernandez Garcia, K. Klemm, Physical Review E Statistical Nonlinear and Soft Matter Physics 91 (2015).
LibreCat: https://research-explorer.ista.ac.at/record/1883
DOI: 10.1103/PhysRevE.91.022803
arXiv: 1012.3298

Phylogenetic relationships of Petrocoptis A. Braun ex Endl. (Caryophyllaceae), a discussed genus from the Iberian Peninsula
E. Cires Rodriguez, J. Prieto, Journal of Plant Research 128 (2015) 223–238.
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Positional information, positional error, and readout precision in morphogenesis: A mathematical framework
G. Tkadik, J. Dubuis, M. Petkova, T. Gregor, Genetics 199 (2015) 39–59.
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Optimizing information flow in small genetic networks. IV. Spatial coupling
T.R. Sokolowski, G. Tkadik, Physical Review E Statistical Nonlinear and Soft Matter Physics 91 (2015).
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On the distribution of local extrema in quantum chaos
F. Pausinger, S. Steinerberger, Physics Letters, Section A 379 (2015) 535–541.
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Intracellular trafficking and PIN-mediated cell polarity during tropic responses in plants
H. Rakusová, M. Fendrych, J. Friml, Current Opinion in Plant Biology 23 (2015) 116–123.
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Succinct representation of concurrent trace sets
A. Gupta, T.A. Henzinger, A. Radhakrishna, R. Samanta, T. Tarrach, in:, ACM, 2015, pp. 433–444.
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The three-state toric homogeneous Markov chain model has Markov degree two
P. Noren, Journal of Symbolic Computation 68/Part 2 (2015) 285–296.
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Iterative scaling in curved exponential families
A. Klimova, T. Rudas, Scandinavian Journal of Statistics 42 (2015) 832–847.
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The monotone secant conjecture in the real Schubert calculus
N. Hein, C. Hillar, A. Martin del Campo Sanchez, F. Sottile, Z. Teitler, Experimental Mathematics 24 (2015) 261–269.
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Faithfulness and learning hypergraphs from discrete distributions
A. Klimova, C. Uhler, T. Rudas, Computational Statistics &; Data Analysis 87 (2015) 57–72.
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The yeast Arf-GAP Glo3p is required for the endocytic recycling of cell surface proteins
D. Kawada, H. Kobayashi, T. Tomita, E. Nakata, M. Nagano, D.E. Siekhaus, J. Toshima, J. Toshimaa, Biochimica et Biophysica Acta - Molecular Cell Research 1853 (2015) 144–156.
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A hybrid MPI-OpenMP parallel implementation for pseudospectral simulations with application to Taylor-Couette flow
L. Shi, M. Rampp, B. Hof, M. Avila, Computers and Fluids 106 (2015) 1–11.
LibreCat: https://research-explorer.ista.ac.at/record/2030
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The persistent homology of a self-map
H. Edelsbrunner, G. Jablonski, M. Mrozek, Foundations of Computational Mathematics 15 (2015) 1213–1244.
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Probabilistic opacity for Markov decision processes
B. Bérard, K. Chatterjee, N. Sznajder,  Information Processing Letters 115 (2015) 52–59.
LibreCat: https://research-explorer.ista.ac.at/record/2034
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Collective excitations of Bose gases in the mean-field regime
P. Nam, R. Seiringer, Archive for Rational Mechanics and Analysis 215 (2015) 381–417.
LibreCat: https://research-explorer.ista.ac.at/record/2085
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The Altshuler-Shklovskii formulas for random band matrices I: the unimodular case
L. Erdös, A. Knowles, Communications in Mathematical Physics 333 (2015) 1365–1416.
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Aspect-oriented linearizability proofs
S. Chakraborty, T.A. Henzinger, A. Sezgin, V. Vafeiadis, Logical Methods in Computer Science 11 (2015).
LibreCat: https://research-explorer.ista.ac.at/record/1832
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The power of linear programming for general-valued CSPs
V. Kolmogorov, J. Thapper, S. divný, SIAM Journal on Computing 44 (2015) 1–36.
LibreCat: https://research-explorer.ista.ac.at/record/2271
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arXiv: 1311.4219

Average case analysis of the classical algorithm for Markov decision processes with Büchi objectives
K. Chatterjee, M. Joglekar, N. Shah, Theoretical Computer Science 573 (2015) 71–89.
LibreCat: https://research-explorer.ista.ac.at/record/1598
DOI: 10.1016/j.tcs.2015.01.050
arXiv: 1202.4175

Homological reconstruction and simplification in 
D. Attali, U. Bauer, O. Devillers, M. Glisse, A. Lieutier, Computational Geometry: Theory and Applications 48 (2015) 606–621.
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Randomness for free
K. Chatterjee, L. Doyen, H. Gimbert, T.A. Henzinger, Information and Computation 245 (2015) 3–16.
LibreCat: https://research-explorer.ista.ac.at/record/1731
DOI: 10.1016/j.ic.2015.06.003

Measuring and synthesizing systems in probabilistic environments
K. Chatterjee, T.A. Henzinger, B. Jobstmann, R. Singh, Journal of the ACM 62 (2015).
LibreCat: https://research-explorer.ista.ac.at/record/1856
DOI: 10.1145/2699430

Improved algorithms for one-pair and k-pair Streett objectives
K. Chatterjee, M.H. Henzinger, V. Loitzenbauer, in:, Proceedings - Symposium on Logic in Computer Science, IEEE, 2015.
LibreCat: https://research-explorer.ista.ac.at/record/1661
DOI: 10.1109/LICS.2015.34

Derivation of nonlinear gibbs measures from many-body quantum mechanics
M. Lewin, P. Nam, N. Rougerie, Journal de l’Ecole Polytechnique - Mathematiques 2 (2015) 65–115.
LibreCat: https://research-explorer.ista.ac.at/record/473
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The serotonin receptor 5-HR regulates the morphology and migratory properties of dendritic cells
K. Holst, D. Guseva, S. Schindler, M.K. Sixt, A. Braun, H. Chopra, O. Pabst, E. Ponimaskin, Journal of Cell Science 128 (2015) 2866–2880.
LibreCat: https://research-explorer.ista.ac.at/record/477
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Looking at mean-payoff and total-payoff through windows
K. Chatterjee, L. Doyen, M. Randour, J. Raskin, Information and Computation 242 (2015) 25–52.
LibreCat: https://research-explorer.ista.ac.at/record/523
DOI: 10.1016/j.ic.2015.03.010

EIN2-directed translational regulation of ethylene signaling in arabidopsis
W. Li, M. Ma, Y. Feng, H. Li, Y. Wang, Y. Ma, M. Li, F. An, H. Guo, Cell 163 (2015) 670–683.
LibreCat: https://research-explorer.ista.ac.at/record/532
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Qualitative analysis of concurrent mean payoff games
K. Chatterjee, R. Ibsen-Jensen, Information and Computation 242 (2015) 2–24.
LibreCat: https://research-explorer.ista.ac.at/record/524
DOI: 10.1016/j.ic.2015.03.009
arXiv: 1409.5306

Automatic generation of alternative starting positions for simple traditional board games
U. Ahmed, K. Chatterjee, S. Gulwani, in:, Proceedings of the Twenty-Ninth AAAI Conference on Artificial Intelligence, AAAI Press, 2015, pp. 745–752.
LibreCat: https://research-explorer.ista.ac.at/record/1481

Qualitative analysis of POMDPs with temporal logic specifications for robotics applications
K. Chatterjee, M. Chmelik, R. Gupta, A. Kanodia, in:, IEEE, 2015, pp. 325–330.
LibreCat: https://research-explorer.ista.ac.at/record/1732
DOI: 10.1109/ICRA.2015.7139019
arXiv: 1409.3360

The patience of concurrent stochastic games with safety and reachability objectives
K. Chatterjee, R. Ibsen-Jensen, K. Hansen, The Patience of Concurrent Stochastic Games with Safety and Reachability Objectives, IST Austria, 2015.
LibreCat: https://research-explorer.ista.ac.at/record/5431
DOI: 10.15479/AT:IST-2015-322-v1-1

Optimal cost indefinite-horizon reachability in goal DEC-POMDPs
1 Anonymous, 2 Anonymous, Optimal Cost Indefinite-Horizon Reachability in Goal DEC-POMDPs, IST Austria, 2015.
LibreCat: https://research-explorer.ista.ac.at/record/5434

Unifying two views on multiple mean-payoff objectives in Markov decision processes
K. Chatterjee, Z. Komárková, J. Kretinsky, (2015) 244–256.
LibreCat: https://research-explorer.ista.ac.at/record/1657
DOI: 10.1109/LICS.2015.32

Nested weighted automata
K. Chatterjee, T.A. Henzinger, J. Otop, in:, Proceedings - Symposium on Logic in Computer Science, IEEE, 2015.
LibreCat: https://research-explorer.ista.ac.at/record/1656
DOI: 10.1109/LICS.2015.72
arXiv: 1606.03598

Unifying two views on multiple mean-payoff objectives in Markov decision processes
K. Chatterjee, Z. Komarkova, J. Kretinsky, Unifying Two Views on Multiple Mean-Payoff Objectives in Markov Decision Processes, IST Austria, 2015.
LibreCat: https://research-explorer.ista.ac.at/record/5429
DOI: 10.15479/AT:IST-2015-318-v1-1

Unifying two views on multiple mean-payoff objectives in Markov decision processes
K. Chatterjee, Z. Komarkova, J. Kretinsky, Unifying Two Views on Multiple Mean-Payoff Objectives in Markov Decision Processes, IST Austria, 2015.
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Nested weighted automata
K. Chatterjee, T.A. Henzinger, J. Otop, Nested Weighted Automata, IST Austria, 2015.
LibreCat: https://research-explorer.ista.ac.at/record/5436
DOI: 10.15479/AT:IST-2015-170-v2-2

The target discounted-sum problem
U. Boker, T.A. Henzinger, J. Otop, in:, LICS, IEEE, 2015, pp. 750–761.
LibreCat: https://research-explorer.ista.ac.at/record/1659
DOI: 10.1109/LICS.2015.74

Edit distance for pushdown automata
K. Chatterjee, T.A. Henzinger, R. Ibsen-Jensen, J. Otop, in:, 42nd International Colloquium, Springer Nature, 2015, pp. 121–133.
LibreCat: https://research-explorer.ista.ac.at/record/1610
DOI: 10.1007/978-3-662-47666-6_10
arXiv: 1504.08259

Faster algorithms for quantitative verification in constant treewidth graphs
K. Chatterjee, R. Ibsen-Jensen, A. Pavlogiannis, Faster Algorithms for Quantitative Verification in Constant Treewidth Graphs, IST Austria, 2015.
LibreCat: https://research-explorer.ista.ac.at/record/5437
DOI: 10.15479/AT:IST-2015-330-v2-1

Faster algorithms for quantitative verification in constant treewidth graphs
K. Chatterjee, R. Ibsen-Jensen, A. Pavlogiannis, Faster Algorithms for Quantitative Verification in Constant Treewidth Graphs, IST Austria, 2015.
LibreCat: https://research-explorer.ista.ac.at/record/5430
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The target discounted-sum problem
U. Boker, T.A. Henzinger, J. Otop, The Target Discounted-Sum Problem, IST Austria, 2015.
LibreCat: https://research-explorer.ista.ac.at/record/5439
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Edit distance for pushdown automata
K. Chatterjee, T.A. Henzinger, R. Ibsen-Jensen, J. Otop, Edit Distance for Pushdown Automata, IST Austria, 2015.
LibreCat: https://research-explorer.ista.ac.at/record/5438
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The complexity of evolutionary games on graphs
K. Chatterjee, R. Ibsen-Jensen, M. Nowak, The Complexity of Evolutionary Games on Graphs, IST Austria, 2015.
LibreCat: https://research-explorer.ista.ac.at/record/5440
DOI: 10.15479/AT:IST-2015-323-v2-2

The complexity of evolutionary games on graphs
K. Chatterjee, R. Ibsen-Jensen, M. Nowak, The Complexity of Evolutionary Games on Graphs, IST Austria, 2015.
LibreCat: https://research-explorer.ista.ac.at/record/5432
DOI: 10.15479/AT:IST-2015-323-v1-1

Reconstructing robust phylogenies of metastatic cancers
J. Reiter, A. Makohon-Moore, J. Gerold, I. Bozic, K. Chatterjee, C. Iacobuzio-Donahue, B. Vogelstein, M. Nowak, Reconstructing Robust Phylogenies of Metastatic Cancers, IST Austria, 2015.
LibreCat: https://research-explorer.ista.ac.at/record/5444
DOI: 10.15479/AT:IST-2015-399-v1-1

A symbolic SAT-based algorithm for almost-sure reachability with small strategies in POMDPs
K. Chatterjee, M. Chmelik, J. Davies, A Symbolic SAT-Based Algorithm for Almost-Sure Reachability with Small Strategies in POMDPs, IST Austria, 2015.
LibreCat: https://research-explorer.ista.ac.at/record/5443
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On generalized Heawood inequalities for manifolds: A Van Kampen–Flores-type nonembeddability result
X. Goaoc, I. Mabillard, P. Paták, Z. Patakova, M. Tancer, U. Wagner, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2015, pp. 476–490.
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The complexity of general-valued CSPs
V. Kolmogorov, A. Krokhin, M. Rolinek, in:, IEEE, 2015, pp. 1246–1258.
LibreCat: https://research-explorer.ista.ac.at/record/1637
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Characterization of an N-acetylglucosaminyltransferase involved in Aspergillus fumigatus zwitterionic glycoinositolphosphoceramide biosynthesis
J. Engel, P.S. Schmalhorst, A. Kruger, C. Muller, F. Buettner, F. Routier, Glycobiology 25 (2015) 1423–1430.
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PMID: 26306635

Excel file containing the raw data for all figures
G. Chevereau, M. Lukacisinova, T. Batur, A. Guvenek, D.H. Ayhan, E. Toprak, M.T. Bollenbach, (2015).
LibreCat: https://research-explorer.ista.ac.at/record/9711
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A sting in the spit: Widespread cross-infection of multiple RNA viruses across wild and managed bees
D. Mcmahon, M. Fürst, J. Caspar, P. Theodorou, M. Brown, R. Paxton, Journal of Animal Ecology 84 (2015) 615–624.
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Opposing effects of allogrooming on disease transmission in ant societies
F. Theis, L.V. Ugelvig, C. Marr, S. Cremer, Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences 370 (2015).
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PMID: 25870394

Data from: Opposing effects of allogrooming on disease transmission in ant societies
F. Theis, L.V. Ugelvig, C. Marr, S. Cremer, (2015).
LibreCat: https://research-explorer.ista.ac.at/record/9721
DOI: 10.5061/dryad.dj2bf

Supporting information text
T. Friedlander, A.E. Mayo, T. Tlusty, U. Alon, (2015).
LibreCat: https://research-explorer.ista.ac.at/record/9718
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DynamicRoots: A software platform for the reconstruction and analysis of growing plant roots
O. Symonova, C. Topp, H. Edelsbrunner, PLoS One 10 (2015).
LibreCat: https://research-explorer.ista.ac.at/record/1793
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Root traits computed by DynamicRoots for the maize root shown in fig 2
O. Symonova, C. Topp, H. Edelsbrunner, (2015).
LibreCat: https://research-explorer.ista.ac.at/record/9737
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Evolution of bow-tie architectures in biology
T. Friedlander, A. Mayo, T. Tlusty, U. Alon, PLoS Computational Biology 11 (2015).
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Indirect genetic effects and the dynamics of social interactions
B. Trubenova, S. Novak, R. Hager, PLoS One 10 (2015).
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Description of the agent based simulations
B. Trubenova, S. Novak, R. Hager, (2015).
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Evolutionary simulation code
T. Friedlander, A.E. Mayo, T. Tlusty, U. Alon, (2015).
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An exploration of the universe of polyglutamine structures
À. Gómez Sicilia, M.K. Sikora, M. Cieplak, M. Carrión Vázquez, PLoS Computational Biology 11 (2015).
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Other fitness models for comparison & for interacting TFBSs
M. Tugrul, T. Paixao, N.H. Barton, G. Tkadik, (2015).
LibreCat: https://research-explorer.ista.ac.at/record/9712
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An exploration of the universe of polyglutamine structures - submission to PLOS journals
À. Gómez Sicilia, M.K. Sikora, M. Cieplak, M. Carrión Vázquez, (2015).
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Mathematical inference of the results
B. Trubenova, S. Novak, R. Hager, (2015).
LibreCat: https://research-explorer.ista.ac.at/record/9715
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Anti-pathogen protection versus survival costs mediated by an ectosymbiont in an ant host
M. Konrad, A.V. Grasse, S. Tragust, S. Cremer, Proceedings of the Royal Society of London Series B Biological Sciences 282 (2015).
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Data from: Increased grooming after repeated brood care provides sanitary benefits in a clonal ant
C. Westhus, L.V. Ugelvig, E. Tourdot, J. Heinze, C. Doums, S. Cremer, (2015).
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Gene ontology enrichment analysis for the most sensitive gene deletion strains for all drugs
G. Chevereau, M. Lukacisinova, T. Batur, A. Guvenek, D.H. Ayhan, E. Toprak, M.T. Bollenbach, (2015).
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Solution structure of CCL19 and identification of overlapping CC and PSGL-1 binding sites
C. Veldkamp, E. Kiermaier, S. Gabel Eissens, M. Gillitzer, D. Lippner, F. Disilvio, C. Mueller, P. Wantuch, G. Chaffee, M. Famiglietti, D. Zgoba, A. Bailey, Y. Bah, S. Engebretson, D. Graupner, E. Lackner, V. Larosa, T. Medeiros, M. Olson, A. Phillips, H. Pyles, A. Richard, S. Schoeller, B. Touzeau, L. Williams, M.K. Sixt, F. Peterson, Biochemistry 54 (2015) 4163–4166.
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Quantifying self-organizing behavior of autonomous robots
G.S. Martius, E. Olbrich, in:, Proceedings of the 13th European Conference on Artificial Life, MIT Press, 2015, p. 78.
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Data from: Adaptation to parasites and costs of parasite resistance in mutator and non-mutator bacteria
S. Wielgoss, T. Bergmiller, A.M. Bischofberger, A.R. Hall, (2015).
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Learning with attributes for object recognition: Parametric and non-parametrics views
V. Sharmanska, Learning with Attributes for Object Recognition: Parametric and Non-Parametrics Views, Institute of Science and Technology Austria, 2015.
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Biological auctions with multiple rewards
J. Reiter, A. Kanodia, R. Gupta, M. Nowak, K. Chatterjee, Proceedings of the Royal Society of London Series B Biological Sciences 282 (2015).
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The subclonal evolution of cancer
J. Reiter, The Subclonal Evolution of Cancer, Institute of Science and Technology Austria, 2015.
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A Koksma-Hlawka inequality for general discrepancy systems
F. Pausinger, A. Svane, Journal of Complexity 31 (2015) 773–797.
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On the approximation of intrinsic volumes
F. Pausinger, On the Approximation of Intrinsic Volumes, Institute of Science and Technology Austria, 2015.
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Dynamics of transcription factor binding site evolution
M. Tugrul, T. Paixao, N.H. Barton, G. Tkadik, PLoS Genetics 11 (2015).
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Complete composition operators for IOCO-testing theory
N. Benes, P. Daca, T.A. Henzinger, J. Kretinsky, D. Nickovic, in:, ACM, 2015, pp. 101–110.
LibreCat: https://research-explorer.ista.ac.at/record/1502
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CEGAR for compositional analysis of qualitative properties in Markov decision processes
K. Chatterjee, M. Chmelik, P. Daca, Formal Methods in System Design 47 (2015) 230–264.
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Faster algorithms for algebraic path properties in recursive state machines with constant treewidth
K. Chatterjee, R. Ibsen-Jensen, A. Pavlogiannis, P. Goyal, ACM SIGPLAN Notices 50 (2015) 97–109.
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Quantitative interprocedural analysis
K. Chatterjee, A. Pavlogiannis, Y. Velner, Proceedings of the 42nd Annual ACM SIGPLAN-SIGACT  50 (2015) 539–551.
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Faster algorithms for quantitative verification in constant treewidth graphs
K. Chatterjee, R. Ibsen-Jensen, A. Pavlogiannis, in:, Springer, 2015, pp. 140–157.
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A framework for automated competitive analysis of on-line scheduling of firm-deadline tasks
K. Chatterjee, A. Pavlogiannis, A. Kößler, U. Schmid, in:, Real-Time Systems Symposium, IEEE, 2015, pp. 118–127.
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High-resolution brittle fracture simulation with boundary elements
D. Hahn, C. Wojtan, in:, ACM, 2015.
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Cortical contractility triggers a stochastic switch to fast amoeboid cell motility
V. Ruprecht, S. Wieser, A. Callan Jones, M. Smutny, H. Morita, K. Sako, V. Barone, M. Ritsch Marte, M.K. Sixt, R. Voituriez, C.-P.J. Heisenberg, Cell 160 (2015) 673–685.
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PIN-dependent auxin transport: Action, regulation, and evolution
M. Adamowski, J. Friml, Plant Cell 27 (2015) 20–32.
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The local semicircle law for random matrices with a fourfold symmetry
J. Alt, Journal of Mathematical Physics 56 (2015).
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Light-assisted small-molecule screening against protein kinases
Á. Inglés Prieto, E. Gschaider-Reichhart, M. Muellner, M. Nowak, S. Nijman, M. Grusch, H.L. Janovjak, Nature Chemical Biology 11 (2015) 952–954.
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Stochastic proofreading mechanism alleviates crosstalk in transcriptional regulation
S.A. Cepeda Humerez, G. Rieckh, G. Tkadik, Physical Review Letters 115 (2015).
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Eliminating higher-multiplicity intersections, III. Codimension 2
S. Avvakumov, I. Mabillard, A. Skopenkov, U. Wagner, ArXiv (n.d.).
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Algorithms for algebraic path properties in concurrent systems of constant treewidth components
K. Chatterjee, R. Ibsen-Jensen, A.K. Goharshady, A. Pavlogiannis, Algorithms for Algebraic Path Properties in Concurrent Systems of Constant Treewidth Components, IST Austria, 2015.
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Algorithms for algebraic path properties in concurrent systems of constant treewidth components
1 Anonymous, 2 Anonymous, 3 Anonymous, 4 Anonymous, Algorithms for Algebraic Path Properties in Concurrent Systems of Constant Treewidth Components, IST Austria, 2015.
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Temporal logic control for stochastic linear systems using abstraction refinement of probabilistic games
M. Svoreová, J. Kretinsky, M. Chmelik, K. Chatterjee, I. Cbrná, C. Belta, in:, Proceedings of the 18th International Conference on Hybrid Systems: Computation and Control, ACM, 2015, pp. 259–268.
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From non-preemptive to preemptive scheduling using synchronization synthesis
P. Cerny, E. Clarke, T.A. Henzinger, A. Radhakrishna, L. Ryzhyk, R. Samanta, T. Tarrach, 9207 (2015) 180–197.
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Model checking gene regulatory networks
M. Giacobbe, C.C. Guet, A. Gupta, T.A. Henzinger, T. Paixao, T. Petrov, 9035 (2015) 469–483.
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