Data from: Increased gene dosage plays a predominant role in the initial stages of evolution of duplicate TEM-1 beta lactamase genes
R. Dhar, T. Bergmiller, A. Wagner, (2014).
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Polynomial-time algorithms for energy games with special weight structures
K. Chatterjee, M.H. Henzinger, S. Krinninger, D. Nanongkai, Algorithmica 70 (2014) 457–492.
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Visualization of two-dimensional symmetric positive definite tensor fields using the heat kernel signature
V. Zobel, J. Reininghaus, I. Hotz, in:, Topological Methods in Data Analysis and Visualization III , Springer, 2014, pp. 249–262.
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UV laser ablation to measure cell and tissue-generated forces in the zebrafish embryo in vivo and ex vivo
M. Smutny, M. Behrndt, P. Campinho, V. Ruprecht, C.-P.J. Heisenberg, in:, C. Nelson (Ed.), Tissue Morphogenesis, Springer, New York, NY, 2014, pp. 219–235.
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The excitation spectrum for Bose fluids with weak interactions
R. Seiringer, Jahresbericht Der Deutschen Mathematiker-Vereinigung 116 (2014) 21–41.
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Notes on the simplification of the Morse-Smale complex
D. Günther, J. Reininghaus, H.-P. Seidel, T. Weinkauf, in:, P.-T. Bremer, I. Hotz, V. Pascucci, R. Peikert (Eds.), Topological Methods in Data Analysis and Visualization III., Springer Nature, Cham, 2014, pp. 135–150.
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Immune defences in ants: Effects of social immunisation and a fungal ectosymbiont in the ant Lasius neglectus
M. Konrad, Immune Defences in Ants: Effects of Social Immunisation and a Fungal Ectosymbiont in the Ant Lasius Neglectus, Institute of Science and Technology Austria, 2014.
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Molecular mechanisms of patterning and subcellular trafficking in Arabidopsis thaliana
P. Marhavá, Molecular Mechanisms of Patterning and Subcellular Trafficking in Arabidopsis Thaliana, Institute of Science and Technology Austria, 2014.
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Stable length estimates of tube-like shapes
H. Edelsbrunner, F. Pausinger, Journal of Mathematical Imaging and Vision 50 (2014) 164–177.
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Eliminating Tverberg points, I. An analogue of the Whitney trick
I. Mabillard, U. Wagner, in:, Proceedings of the Annual Symposium on Computational Geometry, ACM, 2014, pp. 171–180.
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Habitat heterogeneities versus spatial type frequency variances as driving forces of dispersal evolution
S. Novak, Ecology and Evolution 4 (2014) 4589–4597.
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Regression-free synthesis for concurrency
P. Cerny, T.A. Henzinger, A. Radhakrishna, L. Ryzhyk, T. Tarrach, in:, Springer, 2014, pp. 568–584.
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Compositional specifications for IOCO testing
P. Daca, T.A. Henzinger, W. Krenn, D. Nickovic, in:, IEEE 7th International Conference on Software Testing, Verification and Validation, IEEE, 2014.
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CEGAR for qualitative analysis of probabilistic systems
K. Chatterjee, M. Chmelik, P. Daca, in:, Springer, 2014, pp. 473–490.
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Bacterial responses to antibiotics and their combinations
K. Mitosch, M.T. Bollenbach, Environmental Microbiology Reports 6 (2014) 545–557.
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The exact PRF-security of NMAC and HMAC
P. Gazi, K.Z. Pietrzak, M. Rybar, in:, J. Garay, R. Gennaro (Eds.), Springer, 2014, pp. 113–130.
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The notochord breaks bilateral symmetry by controlling cell shapes in the Zebrafish laterality organ
J. Compagnon, V. Barone, S. Rajshekar, R. Kottmeier, K. Pranjic-Ferscha, M. Behrndt, C.-P.J. Heisenberg, Developmental Cell 31 (2014) 774–783.
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Spatio-temporally precise activation of engineered receptor tyrosine kinases by light
M. Grusch, K. Schelch, R. Riedler, E. Gschaider-Reichhart, C. Differ, W. Berger, Á. Inglés Prieto, H.L. Janovjak, EMBO Journal 33 (2014) 1713–1726.
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Embeddability in the 3 sphere is decidable
J. Matousek, E. Sedgwick, M. Tancer, U. Wagner, in:, Proceedings of the Annual Symposium on Computational Geometry, ACM, 2014, pp. 78–84.
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PHAT – Persistent Homology Algorithms Toolbox
U. Bauer, M. Kerber, J. Reininghaus, H. Wagner, in:, ICMS 2014: International Congress on Mathematical Software, Springer Berlin Heidelberg, Berlin, Heidelberg, 2014, pp. 137–143.
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Quantitative fair simulation games
K. Chatterjee, T.A. Henzinger, J. Otop, Y. Velner, Quantitative Fair Simulation Games, IST Austria, 2014.
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Gemeinsame Krankheitsabwehr in Ameisengesellschaften
S. Cremer, Zoologie (2014) 23–30.
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Monitoring neurogenesis in the cerebral cortex: an update
M.P. Postiglione, S. Hippenmeyer, Future Neurology 9 (2014) 323–340.
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Patterns of hippocampal tau pathology differentiate neurodegenerative dementias
I. Milenkovi, T. Petrov, G. Kovács, Dementia and Geriatric Cognitive Disorders 38 (2014) 375–388.
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Random matrices, log-gases and Hölder regularity
L. Erdös, in:, Proceedings of the International Congress of Mathematicians, International Congress of Mathematicians, 2014, pp. 214–236.
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Structure of the excitation spectrum for many-body quantum systems
R. Seiringer, in:, Proceeding of the International Congress of Mathematicans, International Congress of Mathematicians, 2014, pp. 1175–1194.
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A PAC-Bayesian bound for Lifelong Learning
A. Pentina, C. Lampert, in:, ML Research Press, 2014, pp. 991–999.
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Forces driving epithelial spreading in zebrafish epiboly
M. Behrndt, Forces Driving Epithelial Spreading in Zebrafish Epiboly, IST Austria, 2014.
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Soziale Immunität: Wie sich der Staat gegen Pathogene wehrt  Bayerische Akademie der Wissenschaften
S. Cremer, in:, Soziale Insekten in Einer Sich Wandelnden Welt, Verlag Dr. Friedrich Pfeil, 2014, pp. 65–72.
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Sphere packing with limited overlap
M. Iglesias Ham, M. Kerber, C. Uhler, ArXiv (n.d.).
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On the mass concentration for Bose-Einstein condensates with attractive interactions
Y. Guo, R. Seiringer, Letters in Mathematical Physics 104 (2014) 141–156.
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Searching for collective behavior in a large network of sensory neurons
G. Tkadik, O. Marre, D. Amodei, E. Schneidman, W. Bialek, M. Berry, PLoS Computational Biology 10 (2014).
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Organisational immunity in social insects
N. Stroeymeyt, B.E. Casillas Perez, S. Cremer, Current Opinion in Insect Science 5 (2014) 1–15.
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Stimfit: A fast visualization and analysis environment for cellular neurophysiology
A. Schlögl, P.M. Jonas, C. Schmidt-Hieber, S.J. Guzman, Biomedical Engineering / Biomedizinische Technik 58 (2013).
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Calcium: The missing link in auxin action
S. Vanneste, J. Friml, Plants 2 (2013) 650–675.
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Distributed queues in shared memory: Multicore performance and scalability through quantitative relaxation
A. Haas, M. Lippautz, T.A. Henzinger, H. Payer, A. Sokolova, C.M. Kirsch, A. Sezgin, in:, Proceedings of the ACM International Conference on Computing Frontiers - CF ’13, ACM Press, 2013.
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Differentiation
N.H. Barton, in:, Encyclopedia of Biodiversity, 2nd ed., Elsevier, 2013, pp. 508–515.
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Infinite-state games with finitary conditions
K. Chatterjee, N. Fijalkow, in:, 22nd EACSL Annual Conference on Computer Science Logic, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2013, pp. 181–196.
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Synthesizing multiple boolean functions using interpolation on a single proof
G. Hofferek, A. Gupta, B. Könighofer, J. Jiang, R. Bloem, in:, 2013 Formal Methods in Computer-Aided Design, IEEE, 2013, pp. 77–84.
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Nondeterminism in the presence of a diverse or unknown future
U. Boker, D. Kuperberg, O. Kupferman, M. Skrzypczak, 7966 (2013) 89–100.
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Geometry of the faithfulness assumption in causal inference
C. Uhler, G. Raskutti, P. Bühlmann, B. Yu, The Annals of Statistics 41 (2013) 436–463.
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Privacy-preserving data sharing for genome-wide association studies
C. Uhler, A. Slavkovic, S. Fienberg, Journal of Privacy and Confidentiality  5 (2013) 137–166.
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Quantitative relaxation of concurrent data structures
T.A. Henzinger, C. Kirsch, H. Payer, A. Sezgin, A. Sokolova, in:, Proceedings of the 40th Annual ACM SIGPLAN-SIGACT Symposium on Principles of Programming Language, ACM, 2013, pp. 317–328.
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Quantitative abstraction refinement
P. Cerny, T.A. Henzinger, A. Radhakrishna, in:, Proceedings of the 40th Annual ACM SIGPLAN-SIGACT Symposium on Principles of Programming Language, ACM, 2013, pp. 115–128.
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Recognizing straight skeletons and Voronoi diagrams and reconstructing their input
T. Biedl, M. Held, S. Huber, in:, IEEE, 2013, pp. 37–46.
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Reconstructing polygons from embedded straight skeletons
T. Biedl, M. Held, S. Huber, in:, 29th European Workshop on Computational Geometry, TU Braunschweig, 2013, pp. 95–98.
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Tree interpolation in Vampire
R. Blanc, A. Gupta, L. Kovács, B. Kragl, 8312 (2013) 173–181.
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Multi-objective discounted reward verification in graphs and MDPs
K. Chatterjee, V. Forejt, D. Wojtczak, 8312 (2013) 228–242.
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Elementary modal logics over transitive structures
J. Michaliszyn, J. Otop, 23 (2013) 563–577.
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Untangling two systems of noncrossing curves
J. Matousek, E. Sedgwick, M. Tancer, U. Wagner, 8242 (2013) 472–483.
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Learning with rounding, revisited: New reduction properties and applications
J.F. Alwen, S. Krenn, K.Z. Pietrzak, D. Wichs, 8042 (2013) 57–74.
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Digital signatures with minimal overhead from indifferentiable random invertible functions
E. Kiltz, K.Z. Pietrzak, M. Szegedy, 8042 (2013) 571–588.
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Linked (Open) Data - Bibliographische Daten im Semantic Web
P. Danowski, D. Goldfarb, V. Schaffner, W. Seidler, VÖB Mitteilungen 66 (2013) 559–587.
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Efficient signatures of knowledge and DAA in the standard model
D. Bernhard, G. Fuchsbauer, E. Ghadafi, 7954 (2013) 518–533.
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Neural development is dependent on the function of specificity protein 2 in cell cycle progression
H. Liang, G. Xiao, H. Yin, S. Hippenmeyer, J. Horowitz, T. Ghashghaei, Development 140 (2013) 552–561.
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Optimal Coalition Structures in Cooperative Graph Games
Y. Bachrach, P. Kohli, V. Kolmogorov, M. Zadimoghaddam, in:, AAAI Press, 2013, pp. 81–87.
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Reweighted message passing revisited
V. Kolmogorov, Reweighted Message Passing Revisited, IST Austria, 2013.
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A serrate-notch-canoe complex mediates essential interactions between glia and neuroepithelial cells during Drosophila optic lobe development
R. Pérez Gómez, J. Slovakova, N. Rives Quinto, A. Krejdí, A. Carmena, Journal of Cell Science 126 (2013) 4873–4884.
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Potts model, parametric maxflow and k-submodular functions
I. Gridchyn, V. Kolmogorov, in:, IEEE, 2013, pp. 2320–2327.
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Packing ellipsoids with overlap
C. Uhler, S. Wright, SIAM Review 55 (2013) 671–706.
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The influence of demography and local mating environment on sex ratios in a wind-pollinated dioecious plant
M. Pickup, S. Barrett, Ecology and Evolution 3 (2013) 629–639.
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Tension-oriented cell divisions limit anisotropic tissue tension in epithelial spreading during zebrafish epiboly
P. Campinho, M. Behrndt, J. Ranft, T. Risler, N. Minc, C.-P.J. Heisenberg, Nature Cell Biology 15 (2013) 1405–1414.
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Tolerating an infection: an indirect benefit of co-founding queen associations in the ant Lasius niger 
C. Pull, W. Hughes, M. Brown, Naturwissenschaften 100 (2013) 1125–1136.
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The force and effect of cell proliferation
P. Campinho, C.-P.J. Heisenberg, EMBO Journal 32 (2013) 2783–2784.
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Quantitative reactive modeling and verification
T.A. Henzinger, Computer Science Research and Development 28 (2013) 331–344.
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ECHIDNA mediated post Golgi trafficking of auxin carriers for differential cell elongation
Y. Boutté, K. Jonsson, H. Mcfarlane, E. Johnson, D. Gendre, R. Swarup, J. Friml, L. Samuels, S. Robert, R. Bhalerao, PNAS 110 (2013) 16259–16264.
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Drosophila Embryo Stage Annotation using Label Propagation
T. Kazmar, E. Kvon, A. Stark, C. Lampert, in:, IEEE, 2013.
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Mathematical Foundations of Computer Science 2013
K. Chatterjee, J. Sgall, eds., Mathematical Foundations of Computer Science 2013, Springer, 2013.
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Learning to rank using privileged information
V. Sharmanska, N. Quadrianto, C. Lampert, in:, IEEE, 2013, pp. 825–832.
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Cryptographically enforced RBAC
A. Ferrara, G. Fuchsbauer, B. Warinschi, in:, IEEE, 2013, pp. 115–129.
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Computational Methods in Systems Biology
A. Gupta, T.A. Henzinger, eds., Computational Methods in Systems Biology, Springer, 2013.
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Local shape analysis for overlaid data structures
C. Dragoi, C. Enea, M. Sighireanu, in:, Springer, 2013, pp. 150–171.
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Synthesis of AMBA AHB from formal specification: A case study
Y. Godhal, K. Chatterjee, T.A. Henzinger, International Journal on Software Tools for Technology Transfer 15 (2013) 585–601.
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Hot topics in cold gases: A mathematical physics perspective
R. Seiringer, Japanese Journal of Mathematics 8 (2013) 185–232.
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(Open) Linked Data in Bibliotheken
P. Danowski, A. Pohl, (Open) Linked Data in Bibliotheken, De Gruyter, 2013.
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P: Safe asynchronous event-driven programming
A. Desai, V. Gupta, E. Jackson, S. Qadeer, S. Rajamani, D. Zufferey, in:, Proceedings of the 34th ACM SIGPLAN Conference on Programming Language Design and Implementation, ACM, 2013, pp. 321–331.
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Realization of stripes and slabs in two and three dimensions
A. Giuliani, É. Lieb, R. Seiringer, Physical Review B 88 (2013).
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Dissection of gene function at clonal level using mosaic analysis with double markers
S. Hippenmeyer, Frontiers in Biology 8 (2013) 557–568.
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Van der Corput sequences and linear permutations
F. Pausinger, Electronic Notes in Discrete Mathematics 43 (2013) 43–50.
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Aspect-oriented linearizability proofs
T.A. Henzinger, A. Sezgin, V. Vafeiadis, 8052 (2013) 242–256.
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Probabilistic models for CRISPR spacer content evolution 
A. Kupczok, J.P. Bollback, BMC Evolutionary Biology 13 (2013) 54–54.
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Neuronal oscillations scale up and scale down the brain dynamics 
M. Valderrama, V. Botella Soler, M. Le Van Quyen, in:, M. Meyer, Z. Pesenson (Eds.), Multiscale Analysis and Nonlinear Dynamics: From Genes to the Brain, Wiley-VCH, 2013.
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Complete genome sequence of the novel phage MG- infecting bacillus weihenstephanensis
R.A. Fernandes Redondo, A. Kupczok, G. Stift, J.P. Bollback, Genome Announcements 1 (2013).
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Automating separation logic using SMT
R. Piskac, T. Wies, D. Zufferey, 8044 (2013) 773–789.
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Defining the selectivity of processes along the auxin response chain: A study using auxin analogues
S. Simon, M. Kubes, P. Baster, S. Robert, P. Dobrev, J. Friml, J. Petrásek, E. Zaeímalová, New Phytologist 200 (2013) 1034–1048.
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Automata with generalized Rabin pairs for probabilistic model checking and LTL synthesis
K. Chatterjee, A. Gaiser, J. Kretinsky, 8044 (2013) 559–575.
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Faster algorithms for Markov decision processes with low treewidth
K. Chatterjee, J. aCki, 8044 (2013) 543–558.
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arXiv: 1304.0084

Retromer subunits VPA and VP mediate prevacuolar compartment (PVC) function in Arabidopsis
T. Nodzyski, M. Feraru, S. Hirsch, R. De Rycke, C. Nicuales, J. Van Leene, G. De Jaeger, S. Vanneste, J. Friml, Molecular Plant 6 (2013) 1849–1862.
LibreCat: https://research-explorer.ista.ac.at/record/2449
DOI: 10.1093/mp/sst044

Mechanism of protein kinetic stabilization by engineered disulfide crosslinks
I. Sanchez-Romero, A. Ariza, K. Wilson, M. Skjøt, J. Vind, L. De Maria, L. Skov, J. Sánchez Ruiz, PLoS One 8 (2013).
LibreCat: https://research-explorer.ista.ac.at/record/2471
DOI: 10.1371/journal.pone.0070013

Role of the Arabidopsis PIN6 auxin transporter in auxin homeostasis and auxin-mediated development
C. Cazzonelli, M. Vanstraelen, S. Simon, K. Yin, A. Carron Arthur, N. Nisar, G. Tarle, A. Cuttriss, I. Searle, E. Benková, U. Mathesius, J. Masle, J. Friml, B. Pogson, PLoS One 8 (2013).
LibreCat: https://research-explorer.ista.ac.at/record/2472
DOI: 10.1371/journal.pone.0070069

Overexpression of the auxin binding PROTEIN1 modulates PIN-dependent auxin transport in tobacco cells
M. covanová, M. Sauer, J. Rychtá, J. Friml, J. Petrásek, E. Zaeímalová, PLoS One 8 (2013).
LibreCat: https://research-explorer.ista.ac.at/record/2470
DOI: 10.1371/journal.pone.0070050

Highly adaptive liquid simulations on tetrahedral meshes
R. Ando, N. Thuerey, C. Wojtan, ACM Transactions on Graphics 32 (2013).
LibreCat: https://research-explorer.ista.ac.at/record/2466
DOI: 10.1145/2461912.2461982

Putting holes in holey geometry: Topology change for arbitrary surfaces
G. Bernstein, C. Wojtan, ACM Transactions on Graphics 32 (2013).
LibreCat: https://research-explorer.ista.ac.at/record/2467
DOI: 10.1145/2461912.2462027

Liquid surface tracking with error compensation
M. Bojsen-Hansen, C. Wojtan, ACM Transactions on Graphics 32 (2013).
LibreCat: https://research-explorer.ista.ac.at/record/2468
DOI: 10.1145/2461912.2461991

Three functions of cadherins in cell adhesion
J.-L. Maître, C.-P.J. Heisenberg, Current Biology 23 (2013) 6–3.
LibreCat: https://research-explorer.ista.ac.at/record/2469
DOI: 10.1016/j.cub.2013.06.019
PMID: 23885883

Genetic hitch-hiking in spatially extended populations
N.H. Barton, A. Etheridge, J. Kelleher, A. Véber, Theoretical Population Biology 87 (2013) 75–89.
LibreCat: https://research-explorer.ista.ac.at/record/2473
DOI: 10.1016/j.tpb.2012.12.001

Formalizing and reasoning about quality
S. Almagor, U. Boker, O. Kupferman, 7966 (2013) 15–27.
LibreCat: https://research-explorer.ista.ac.at/record/2517
DOI: 10.1007/978-3-642-39212-2_3

The power of linear programming for finite-valued CSPs: A constructive characterization
V. Kolmogorov, in:, Springer, 2013, pp. 625–636.
LibreCat: https://research-explorer.ista.ac.at/record/2518
DOI: 10.1007/978-3-642-39206-1_53
arXiv: 1207.7213

Attribute-based classification for zero-shot learning of object categories
C. Lampert, H. Nickisch, S. Harmeling, IEEE Transactions on Pattern Analysis and Machine Intelligence 36 (2013) 453–465.
LibreCat: https://research-explorer.ista.ac.at/record/2516
DOI: 10.1109/TPAMI.2013.140

The supervised IBP: Neighbourhood preserving infinite latent feature models
N. Quadrianto, V. Sharmanska, D. Knowles, Z. Ghahramani, in:, Proceedings of the 29th Conference Uncertainty in Artificial Intelligence, AUAI Press, 2013, pp. 527–536.
LibreCat: https://research-explorer.ista.ac.at/record/2520