Accumulation and maintenance of information in evolution
M. Hledik, N.H. Barton, G. Tkadik, Proceedings of the National Academy of Sciences 119 (2022).
LibreCat: https://research-explorer.ista.ac.at/record/12081
DOI: 10.1073/pnas.2123152119
WoS: 000889278400014
PMID: 36037343

Microscopic origins of the crystallographically preferred growth in evaporation-induced colloidal crystals
L. Li, C.P. Goodrich, H. Yang, K.R. Phillips, Z. Jia, H. Chen, L. Wang, J. Zhong, A. Liu, J. Lu, J. Shuai, M.P. Brenner, F. Spaepen, J. Aizenberg, PNAS 118 (2021).
LibreCat: https://research-explorer.ista.ac.at/record/12667
DOI: 10.1073/pnas.2107588118
PMID: 34341109

Designing self-assembling kinetics with differentiable statistical physics models
C.P. Goodrich, E.M. King, S.S. Schoenholz, E.D. Cubuk, M.P. Brenner, Proceedings of the National Academy of Sciences 118 (2021).
LibreCat: https://research-explorer.ista.ac.at/record/9257
DOI: 10.1073/pnas.2024083118
WoS: 000627429100097
PMID: 33653960

Divergence among rice cultivars reveals roles for transposition and epimutation in ongoing evolution of genomic imprinting
J.A. Rodrigues, P.-H. Hsieh, D. Ruan, T. Nishimura, M.K. Sharma, R. Sharma, X. Ye, N.D. Nguyen, S. Nijjar, P.C. Ronald, R.L. Fischer, D. Zilberman, Proceedings of the National Academy of Sciences 118 (2021).
LibreCat: https://research-explorer.ista.ac.at/record/9877
DOI: 10.1073/pnas.2104445118
WoS: 000685037700012
PMID: 34272287

Experimental observation of the origin and structure of elastoinertial turbulence
G.H. Choueiri, J.M. Lopez Alonso, A. Varshney, S. Sankar, B. Hof, Proceedings of the National Academy of Sciences 118 (2021).
LibreCat: https://research-explorer.ista.ac.at/record/10299
DOI: 10.1073/pnas.2102350118
WoS: 000720926900019
PMID:  34732570
arXiv: 2103.00023

In situ small-angle X-ray scattering reveals solution phase discharge of Li–O2 batteries with weakly solvating electrolytes
C. Prehal, A. Samojlov, M. Nachtnebel, L. Lovicar, M. Kriechbaum, H. Amenitsch, S.A. Freunberger, Proceedings of the National Academy of Sciences 118 (2021).
LibreCat: https://research-explorer.ista.ac.at/record/9301
DOI: 10.1073/pnas.2021893118
WoS: 000637398300050

Physical mechanisms of amyloid nucleation on fluid membranes
J. Krausser, T.P.J. Knowles, A. Sari, Proceedings of the National Academy of Sciences 117 (2020) 33090–33098.
LibreCat: https://research-explorer.ista.ac.at/record/10336
DOI: 10.1073/pnas.2007694117
PMID: 33328273

Thermodynamic and kinetic design principles for amyloid-aggregation inhibitors
T.C.T. Michaels, A. Sari, G. Meisl, G.T. Heller, S. Curk, P. Arosio, S. Linse, C.M. Dobson, M. Vendruscolo, T.P.J. Knowles, Proceedings of the National Academy of Sciences 117 (2020) 24251–24257.
LibreCat: https://research-explorer.ista.ac.at/record/10347
DOI: 10.1073/pnas.2006684117
PMID: 32929030

The  Arabidopsis epigenetic regulator IC as an accessory protein of polycomb repressive complex 2
R.H. Bloomer, C.E. Hutchison, I. Bäurle, J. Walker, X. Fang, P. Perera, C.N. Velanis, S. Gümüs, C. Spanos, J. Rappsilber, X. Feng, J. Goodrich, C. Dean, Proceedings of the National Academy of Sciences 117 (2020) 16660–16666.
LibreCat: https://research-explorer.ista.ac.at/record/12188
DOI: 10.1073/pnas.1920621117
PMID: 32601198

Stochastic activation and bistability in a Rab GTPase regulatory network
U. Bezeljak, H. Loya, B.M. Kaczmarek, T.E. Saunders, M. Loose, Proceedings of the National Academy of Sciences 117 (2020) 6504–6549.
LibreCat: https://research-explorer.ista.ac.at/record/7580
DOI: 10.1073/pnas.1921027117
WoS: 000521821800040

Calcium modulates the domain flexibility and function of an ;1-actinin similar to the ancestral ;1-actinin
N. Pinotsis, K. Zielinska, M. Babuta, J.L. Arolas, J. Kostan, M.B. Khan, C. Schreiner, A.P. Testa Salmazo, L. Ciccarelli, M. Puchinger, E.A. Gkougkoulia, E. de A. Ribeiro, T.C. Marlovits, A. Bhattacharya, K. Djinovic-Carugo, Proceedings of the National Academy of Sciences 117 (2020) 22101–22112.
LibreCat: https://research-explorer.ista.ac.at/record/15061
DOI: 10.1073/pnas.1917269117
PMID: 32848067

Wounding-induced changes in cellular pressure and localized auxin signalling spatially coordinate restorative divisions in roots
L. Hörmayer, J.C. Montesinos López, P. Marhavá, E. Benková, S. Yoshida, J. Friml, Proceedings of the National Academy of Sciences 117 (2020).
LibreCat: https://research-explorer.ista.ac.at/record/8002
DOI: 10.1073/pnas.2003346117
WoS: 000565729700033
PMID: 32541049

DNA demethylation by ROa in rice vegetative cells promotes methylation in sperm
M.Y. Kim, A. Ono, S. Scholten, T. Kinoshita, D. Zilberman, T. Okamoto, R.L. Fischer, Proceedings of the National Academy of Sciences 116 (2019) 9652–9657.
LibreCat: https://research-explorer.ista.ac.at/record/9460
DOI: 10.1073/pnas.1821435116
PMID: 31000601

Ab initio thermodynamics of liquid and solid water
B. Cheng, E.A. Engel, J. Behler, C. Dellago, M. Ceriotti, Proceedings of the National Academy of Sciences 116 (2019) 1110–1115.
LibreCat: https://research-explorer.ista.ac.at/record/9689
DOI: 10.1073/pnas.1815117116
PMID: 30610171
arXiv: 1811.08630

Real-time probing of chirality during a chemical reaction
D.R. Baykusheva, D. Zindel, V. Svoboda, E. Bommeli, M. Ochsner, A. Tehlar, H.J. Wörner, Proceedings of the National Academy of Sciences 116 (2019) 23923–23929.
LibreCat: https://research-explorer.ista.ac.at/record/14001
DOI: 10.1073/pnas.1907189116
PMID: 31723044
arXiv: 1906.10818

Salicylic acid-mediated plasmodesmal closure via Remorin-dependent lipid organization
D. Huang, Y. Sun, Z. Ma, M. Ke, Y. Cui, Z. Chen, C. Chen, C. Ji, T. Tran, L. Yang, S. Lam, Y. Han, G. Shu, J. Friml, Y. Miao, L. Jiang, X. Chen, Proceedings of the National Academy of Sciences of the United States of America 116 (2019) 21274–21284.
LibreCat: https://research-explorer.ista.ac.at/record/6999
DOI: 10.1073/pnas.1911892116
WoS: 000490183000068
PMID: 31575745

Genetic dissection of neuropeptide cell biology at high and low activity in a defined sensory neuron
P. Laurent, Q. Ch’ng, M. Jospin, C. Chen, R. Lorenzo, M. de Bono, Proceedings of the National Academy of Sciences 115 (2018) 90–99.
LibreCat: https://research-explorer.ista.ac.at/record/6109
DOI: 10.1073/pnas.1714610115
PMID: 29959203

Evidence of directional and stabilizing selection in contemporary humans
J.S. Sanjak, J. Sidorenko, M.R. Robinson, K.R. Thornton, P.M. Visscher, Proceedings of the National Academy of Sciences 115 (2018) 151–156.
LibreCat: https://research-explorer.ista.ac.at/record/7724
DOI: 10.1073/pnas.1707227114

Acceleration of tropical cyclogenesis by self-aggregation feedbacks
C.J. Muller, D.M. Romps, Proceedings of the National Academy of Sciences 115 (2018) 2930–2935.
LibreCat: https://research-explorer.ista.ac.at/record/9135
DOI: 10.1073/pnas.1719967115

FACT complex is required for DNA demethylation at heterochromatin during reproduction in Arabidopsis
J.M. Frost, M.Y. Kim, G.T. Park, P.-H. Hsieh, M. Nakamura, S.J.H. Lin, H. Yoo, J. Choi, Y. Ikeda, T. Kinoshita, Y. Choi, D. Zilberman, R.L. Fischer, Proceedings of the National Academy of Sciences 115 (2018) 20–29.
LibreCat: https://research-explorer.ista.ac.at/record/9471
DOI: 10.1073/pnas.1713333115
PMID: 29712855

Aspect controls the survival of ice cliffs on debris-covered glaciers
P. Buri, F. Pellicciotti, PNAS 115 (2018) 4369–4374.
LibreCat: https://research-explorer.ista.ac.at/record/12607
DOI: 10.1073/pnas.1713892115

Reversible photoswitching of encapsulated azobenzenes in water
D. Samanta, J. Gemen, Z. Chu, Y. Diskin-Posner, L.J.W. Shimon, R. Klajn, Proceedings of the National Academy of Sciences 115 (2018) 9379–9384.
LibreCat: https://research-explorer.ista.ac.at/record/13376
DOI: 10.1073/pnas.1712787115
PMID: 29717041

cShephers crookd neurons drive and synchronize the enhancing and suppressive mechanisms of the midbrain stimulus selection network
F. Garrido-Charad, T.A. Vega Zuniga, C. Gutiérrez-Ibáñez, P. Fernandez, L. López-Jury, C. González-Cabrera, H.J. Karten, H. Luksch, G.J. Marín, Proceedings of the National Academy of Sciences 115 (2018) 15–23.
LibreCat: https://research-explorer.ista.ac.at/record/6010
DOI: 10.1073/pnas.1804517115
WoS: 000440982000020
PMID: 30026198

Numerical evidence for thermally induced monopoles
P. Wirnsberger, D. Fijan, R.A. Lightwood, A. Sari, C. Dellago, D. Frenkel, Proceedings of the National Academy of Sciences 114 (2017) 4911–4914.
LibreCat: https://research-explorer.ista.ac.at/record/10373
DOI: 10.1073/pnas.1621494114
PMID: 28439003
arXiv: 1610.06840

Memory of recent oxygen experience switches pheromone valence inCaenorhabditis elegans
L.A. Fenk, M. de Bono, Proceedings of the National Academy of Sciences 114 (2017) 4195–4200.
LibreCat: https://research-explorer.ista.ac.at/record/6115
DOI: 10.1073/pnas.1618934114
PMID: 28373553

Modulation of sensory information processing by a neuroglobin in Caenorhabditis elegans
S. Oda, Y. Toyoshima, M. de Bono, Proceedings of the National Academy of Sciences 114 (2017) 58–65.
LibreCat: https://research-explorer.ista.ac.at/record/6113
DOI: 10.1073/pnas.1614596114
PMID: 28536200

Detection and quantification of inbreeding depression for complex traits from SNP data
L. Yengo, Z. Zhu, N.R. Wray, B.S. Weir, J. Yang, M.R. Robinson, P.M. Visscher, Proceedings of the National Academy of Sciences 114 (2017) 8602–8607.
LibreCat: https://research-explorer.ista.ac.at/record/7729
DOI: 10.1073/pnas.1621096114

Designing allostery-inspired response in mechanical networks
J.W. Rocks, N. Pashine, I. Bischofberger, C.P. Goodrich, A.J. Liu, S.R. Nagel, Proceedings of the National Academy of Sciences 114 (2017) 2520–2525.
LibreCat: https://research-explorer.ista.ac.at/record/7757
DOI: 10.1073/pnas.1612139114

Using active colloids as machines to weave and braid on the micrometer scale
C.P. Goodrich, M.P. Brenner, Proceedings of the National Academy of Sciences 114 (2017) 257–262.
LibreCat: https://research-explorer.ista.ac.at/record/7758
DOI: 10.1073/pnas.1608838114

Inhibitory engrams in perception and memory
H.C. Barron, T.P. Vogels, T.E. Behrens, M. Ramaswami, Proceedings of the National Academy of Sciences 114 (2017) 6666–6674.
LibreCat: https://research-explorer.ista.ac.at/record/8018
DOI: 10.1073/pnas.1701812114
PMID: 28611219

Formation of a repressive complex in the mammalian circadian clock is mediated by the secondary pocket of CR
A.K. Michael, J.L. Fribourgh, Y. Chelliah, C.R. Sandate, G.L. Hura, D. Schneidman-Duhovny, S.M. Tripathi, J.S. Takahashi, C.L. Partch, Proceedings of the National Academy of Sciences 114 (2017) 1560–1565.
LibreCat: https://research-explorer.ista.ac.at/record/15157
DOI: 10.1073/pnas.1615310114
PMID: 28143926

Scaling ansatz for the jamming transition
C.P. Goodrich, A.J. Liu, J.P. Sethna, Proceedings of the National Academy of Sciences 113 (2016) 9745–9750.
LibreCat: https://research-explorer.ista.ac.at/record/7760
DOI: 10.1073/pnas.1601858113

A ring-shaped conduit connects the mother cell and forespore during sporulation in Bacillus subtilis
C.D.A. Rodrigues, X. Henry, E. Neumann, V. Kurauskas, L. Bellard, Y. Fichou, P. Schanda, G. Schoehn, D.Z. Rudner, C. Morlot, Proceedings of the National Academy of Sciences 113 (2016) 11585–11590.
LibreCat: https://research-explorer.ista.ac.at/record/8452
DOI: 10.1073/pnas.1609604113

Contrasting climate change impact on river flows from high-altitude catchments in the Himalayan and Andes Mountains
S. Ragettli, W.W. Immerzeel, F. Pellicciotti, PNAS 113 (2016) 9222–9227.
LibreCat: https://research-explorer.ista.ac.at/record/12618
DOI: 10.1073/pnas.1606526113
PMID: 27482082

DNA demethylation is initiated in the central cells of Arabidopsis and rice
K. Park, M.Y. Kim, M. Vickers, J.-S. Park, Y. Hyun, T. Okamoto, D. Zilberman, R.L. Fischer, X. Feng, Y. Choi, S. Scholten, Proceedings of the National Academy of Sciences 113 (2016) 15138–15143.
LibreCat: https://research-explorer.ista.ac.at/record/9477
DOI: 10.1073/pnas.1619047114
PMID: 27956642

Arabidopsis male sexual lineage exhibits more robust maintenance of CG methylation than somatic tissues
P.-H. Hsieh, S. He, T. Buttress, H. Gao, M. Couchman, R.L. Fischer, D. Zilberman, X. Feng, Proceedings of the National Academy of Sciences 113 (2016) 15132–15137.
LibreCat: https://research-explorer.ista.ac.at/record/9473
DOI: 10.1073/pnas.1619074114
PMID: 27956643

Design of a molecular support for cryo-EM structure determination
T.G. Martin, T.A.M. Bharat, A.C. Joerger, X. Bai, F.M. Praetorius, A.R. Fersht, H. Dietz, S.H.W. Scheres, PNAS 113 (2016) 56–63.
LibreCat: https://research-explorer.ista.ac.at/record/14304
DOI: 10.1073/pnas.1612720113
PMID: 27821763

Environmental CO2 inhibits Caenorhabditis elegans egg-laying by modulating olfactory neurons and evokes widespread changes in neural activity
L.A. Fenk, M. de Bono, Proceedings of the National Academy of Sciences 112 (2015) 25–34.
LibreCat: https://research-explorer.ista.ac.at/record/6118
DOI: 10.1073/pnas.1423808112
PMID: 26100886

Crucial role of nonspecific interactions in amyloid nucleation
A. Sari, Y.C. Chebaro, T.P.J. Knowles, D. Frenkel, Proceedings of the National Academy of Sciences 111 (2014) 17869–17874.
LibreCat: https://research-explorer.ista.ac.at/record/10382
DOI: 10.1073/pnas.1410159111
PMID: 25453085
arXiv: 1412.0897

Activity-dependent dendritic spine neck changes are correlated with synaptic strength
R. Araya, T.P. Vogels, R. Yuste, Proceedings of the National Academy of Sciences 111 (2014) 95–04.
LibreCat: https://research-explorer.ista.ac.at/record/8021
DOI: 10.1073/pnas.1321869111
PMID: 24982196

The AAA-ATPase molecular chaperone Cd/ disassembles sumoylated centromeres, decondenses heterochromatin, and activates ribosomal RNA genes
Z. Mérai, N. Chumak, M. García-Aguilar, T.-F. Hsieh, T. Nishimura, V.K. Schoft, J. Bindics, L. alusarz, S. Arnoux, S. Opravil, K. Mechtler, D. Zilberman, R.L. Fischer, H. Tamaru, Proceedings of the National Academy of Sciences 111 (2014) 16166–16171.
LibreCat: https://research-explorer.ista.ac.at/record/9479
DOI: 10.1073/pnas.1418564111
PMID: 25344531

In vivo genetic dissection of O2-evoked cGMP dynamics in a Caenorhabditis elegans gas sensor
A. Couto, S. Oda, V.O. Nikolaev, Z. Soltesz, M. de Bono, Proceedings of the National Academy of Sciences 110 (2013) 01–10.
LibreCat: https://research-explorer.ista.ac.at/record/6133
DOI: 10.1073/pnas.1217428110
PMID: 23940325

Imprinted expression of genes and small RNA is associated with localized hypomethylation of the maternal genome in rice endosperm
J.A. Rodrigues, R. Ruan, T. Nishimura, M.K. Sharma, R. Sharma, P.C. Ronald, R.L. Fischer, D. Zilberman, Proceedings of the National Academy of Sciences 110 (2013) 7934–7939.
LibreCat: https://research-explorer.ista.ac.at/record/9481
DOI: 10.1073/pnas.1306164110
PMID: 23613580

Neuronal and molecular substrates for optimal foraging in Caenorhabditis elegans
K. Milward, K.E. Busch, R.J. Murphy, M. de Bono, B. Olofsson, Proceedings of the National Academy of Sciences 108 (2011) 20672–20677.
LibreCat: https://research-explorer.ista.ac.at/record/6137
DOI: 10.1073/pnas.1106134109
PMID: 22135454

Regulation of imprinted gene expression in Arabidopsis endosperm
T.-F. Hsieh, J. Shin, R. Uzawa, P. Silva, S. Cohen, M.J. Bauer, M. Hashimoto, R.C. Kirkbride, J.J. Harada, D. Zilberman, R.L. Fischer, Proceedings of the National Academy of Sciences 108 (2011) 1755–1762.
LibreCat: https://research-explorer.ista.ac.at/record/9483
DOI: 10.1073/pnas.1019273108
PMID: 21257907

Mapping backbone and side-chain interactions in the transition state of a coupled protein folding and binding reaction
A. Bachmann, D. Wildemann, F.M. Praetorius, G. Fischer, T. Kiefhaber, PNAS 108 (2011) 3952–3957.
LibreCat: https://research-explorer.ista.ac.at/record/14305
DOI: 10.1073/pnas.1012668108
PMID: 21325613

Local DNA hypomethylation activates genes in rice endosperm
A. Zemach, M.Y. Kim, P. Silva, J.A. Rodrigues, B. Dotson, M.D. Brooks, D. Zilberman, Proceedings of the National Academy of Sciences 107 (2010) 18729–18734.
LibreCat: https://research-explorer.ista.ac.at/record/9485
DOI: 10.1073/pnas.1009695107
PMID: 20937895

A carbon dioxide avoidance behavior is integrated with responses to ambient oxygen and food in Caenorhabditis elegans
A.J. Bretscher, K.E. Busch, M. de Bono, Proceedings of the National Academy of Sciences 105 (2008) 8044–8049.
LibreCat: https://research-explorer.ista.ac.at/record/6146
DOI: 10.1073/pnas.0707607105
PMID: 18524954

Protein folding and unfolding studied at atomic resolution by fast two-dimensional NMR spectroscopy
P. Schanda, V. Forge, B. Brutscher, Proceedings of the National Academy of Sciences 104 (2007) 11257–11262.
LibreCat: https://research-explorer.ista.ac.at/record/8483
DOI: 10.1073/pnas.0702069104

DNA demethylation in the Arabidopsis genome
J. Penterman, D. Zilberman, J.H. Huh, T. Ballinger, S. Henikoff, R.L. Fischer, Proceedings of the National Academy of Sciences 104 (2007) 6752–6757.
LibreCat: https://research-explorer.ista.ac.at/record/9487
DOI: 10.1073/pnas.0701861104
PMID: 17409185

Light-controlled self-assembly of reversible and irreversible nanoparticle suprastructures
R. Klajn, K.J.M. Bishop, B.A. Grzybowski, Proceedings of the National Academy of Sciences 104 (2007) 10305–10309.
LibreCat: https://research-explorer.ista.ac.at/record/13425
DOI: 10.1073/pnas.0611371104
PMID: 17563381

Extracting knowledge from the World Wide Web
M.H. Henzinger, S. Lawrence, Proceedings of the National Academy of Sciences 101 (2004) 5186–5191.
LibreCat: https://research-explorer.ista.ac.at/record/11877
DOI: 10.1073/pnas.0307528100
PMID: 14745041

The weighted-volume derivative of a space-filling diagram
H. Edelsbrunner, P. Koehl, PNAS 100 (2003) 2203–2208.
LibreCat: https://research-explorer.ista.ac.at/record/3992
DOI: 10.1073/pnas.0537830100
PMID: 12601153

Fast synaptic inhibition promotes synchronized gamma oscillations in hippocampal interneuron networks
M. Bartos, I. Vida, M. Frotscher, A. Meyer, H. Monyer, J. Geiger, P.M. Jonas, PNAS 99 (2002) 13222–13227.
LibreCat: https://research-explorer.ista.ac.at/record/3800
DOI: 10.1073/pnas.192233099
PMID: 12235359

Dobzhansky-Muller incompatibilities in protein evolution
A. Kondrashov, S. Sunyaev, F. Kondrashov, PNAS 99 (2002) 14878–14883.
LibreCat: https://research-explorer.ista.ac.at/record/885
DOI: 10.1073/pnas.232565499
PMID: 12403824

Firing rates of hippocampal neurons are preserved during subsequent sleep episodes and modified by novel awake experience
H. Hirase, X. Leinekugel, A. Czurkó, J.L. Csicsvari, G. Buzsáki, PNAS 98 (2001) 9386–9390.
LibreCat: https://research-explorer.ista.ac.at/record/3540
DOI: 10.1073/pnas.161274398
PMID: 11470910

PTP and LTP at a hippocampal mossy fiber-interneuron synapse
H. Alle, P.M. Jonas, J. Geiger, PNAS 98 (2001) 14708–14713.
LibreCat: https://research-explorer.ista.ac.at/record/3496
DOI: 10.1073/pnas.251610898 
PMID: 11734656

Multidimensional epistasis and the disadvantage of sex
F. Kondrashov, A. Kondrashov, PNAS 98 (2001) 12089–12092.
LibreCat: https://research-explorer.ista.ac.at/record/874
DOI: 10.1073/pnas.211214298
PMID: 11593020

The plastid ndh genes code for an NADH-specific dehydrogenase: Isolation of a complex I analogue from pea thylakoid membranes
L.A. Sazanov, P. Burrows, P. Nixon, PNAS 95 (1998) 1319–1324.
LibreCat: https://research-explorer.ista.ac.at/record/1956
DOI: 10.1073/pnas.95.3.1319
PMID: 9448329 

The strength of indirect selection on female mating preferences
M. Kirkpatrick, N.H. Barton, PNAS 94 (1997) 1282–1286.
LibreCat: https://research-explorer.ista.ac.at/record/3632
DOI: 10.1073/pnas.94.4.1282
PMID: 9037044 

Single-channel recording in myelinated nerve fibers reveals one type of Na channel but different K channels
P.M. Jonas, M. Bräu, M. Hermsteiner, W. Vogel, PNAS 86 (1989) 7238–7242.
LibreCat: https://research-explorer.ista.ac.at/record/3466
DOI: 10.1073/pnas.86.18.7238
PMID: 2550937