Balancing complexity, performance and plausibility to meta learn plasticity rules in recurrent spiking networks
B.J. Confavreux, E.J. Agnes, F. Zenke, H. Sprekeler, T.P. Vogels, PLoS Computational Biology 21 (2025).

kCSD-python, reliable current source density estimation with quality control
C. Chintaluri, M. Bejtka, W. Sredniawa, M. Czerwinski, J.M. Dzik, J. Jedrzejewska-Szmek, D.K. Wojciki, PLoS Computational Biology 20 (2024).

Amplifiers of selection for the Moran process with both Birth-death and death-Birth updating
J. Svoboda, S.S. Joshi, J. Tkadlec, K. Chatterjee, PLoS Computational Biology 20 (2024).

Dynamics of morphogen source formation in a growing tissue
R.D.J.G. Ho, K. Kishi, M. Majka, A. Kicheva, M.P. Zagórski, PLoS Computational Biology 20 (2024).

Parameter inference for stochastic biochemical models from perturbation experiments parallelised at the single cell level
A. Davidovi, R.P. Chait, G. Batt, J. Ruess, PLoS Computational Biology 18 (2022).

Dynamic maximum entropy provides accurate approximation of structured population dynamics
K. Bodova, E. Szep, N.H. Barton, PLoS Computational Biology 17 (2021).

Mistakes can stabilise the dynamics of rock-paper-scissors games
M. Kleshnina, S.S. Streipert, J.A. Filar, K. Chatterjee, PLoS Computational Biology 17 (2021).

Ten simple rules to improve academic work- life balance
M.J. Bartlett, F.N. Arslan, A. Bankston, S. Sarabipour, PLoS Computational Biology 17 (2021).

The Moran process on 2-chromatic graphs
K. Kaveh, A. McAvoy, K. Chatterjee, M.A. Nowak, PLOS Computational Biology 16 (2020).

Limits on amplifiers of natural selection under death-Birth updating
J. Tkadlec, A. Pavlogiannis, K. Chatterjee, M.A. Nowak, PLoS Computational Biology 16 (2020).

Estimating information in time-varying signals
S.A. Cepeda Humerez, J. Ruess, G. Tkadik, PLoS Computational Biology 15 (2019) e1007290.

Sensory noise predicts divisive reshaping of receptive fields
M.J. Chalk, P. Masset, B. Gutkin, S. Denève, PLoS Computational Biology 13 (2017).

Probabilistic models for neural populations that naturally capture global coupling and criticality
J. Humplik, G. Tkadik, PLoS Computational Biology 13 (2017).

Stress induced mutagenesis: Stress diversity facilitates the persistence of mutator genes
M. Lukacisinova, S. Novak, T. Paixao, PLoS Computational Biology 13 (2017).

Searching for collective behavior in a large network of sensory neurons
G. Tkadik, O. Marre, D. Amodei, E. Schneidman, W. Bialek, M. Berry, PLoS Computational Biology 10 (2014).