Potts model, parametric maxflow and k-submodular functions
I. Gridchyn, V. Kolmogorov, in:, IEEE, 2013, pp. 2320–2327.
LibreCat: https://research-explorer.ista.ac.at/record/2276
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Packing ellipsoids with overlap
C. Uhler, S. Wright, SIAM Review 55 (2013) 671–706.
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The influence of demography and local mating environment on sex ratios in a wind-pollinated dioecious plant
M. Pickup, S. Barrett, Ecology and Evolution 3 (2013) 629–639.
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Tension-oriented cell divisions limit anisotropic tissue tension in epithelial spreading during zebrafish epiboly
P. Campinho, M. Behrndt, J. Ranft, T. Risler, N. Minc, C.-P.J. Heisenberg, Nature Cell Biology 15 (2013) 1405–1414.
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The force and effect of cell proliferation
P. Campinho, C.-P.J. Heisenberg, EMBO Journal 32 (2013) 2783–2784.
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Quantitative reactive modeling and verification
T.A. Henzinger, Computer Science Research and Development 28 (2013) 331–344.
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ECHIDNA mediated post Golgi trafficking of auxin carriers for differential cell elongation
Y. Boutté, K. Jonsson, H. Mcfarlane, E. Johnson, D. Gendre, R. Swarup, J. Friml, L. Samuels, S. Robert, R. Bhalerao, PNAS 110 (2013) 16259–16264.
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Drosophila Embryo Stage Annotation using Label Propagation
T. Kazmar, E. Kvon, A. Stark, C. Lampert, in:, IEEE, 2013.
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Learning to rank using privileged information
V. Sharmanska, N. Quadrianto, C. Lampert, in:, IEEE, 2013, pp. 825–832.
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Cryptographically enforced RBAC
A. Ferrara, G. Fuchsbauer, B. Warinschi, in:, IEEE, 2013, pp. 115–129.
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Local shape analysis for overlaid data structures
C. Dragoi, C. Enea, M. Sighireanu, in:, Springer, 2013, pp. 150–171.
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Synthesis of AMBA AHB from formal specification: A case study
Y. Godhal, K. Chatterjee, T.A. Henzinger, International Journal on Software Tools for Technology Transfer 15 (2013) 585–601.
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Hot topics in cold gases: A mathematical physics perspective
R. Seiringer, Japanese Journal of Mathematics 8 (2013) 185–232.
LibreCat: https://research-explorer.ista.ac.at/record/2297
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(Open) Linked Data in Bibliotheken
P. Danowski, A. Pohl, (Open) Linked Data in Bibliotheken, De Gruyter, 2013.
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Realization of stripes and slabs in two and three dimensions
A. Giuliani, É. Lieb, R. Seiringer, Physical Review B 88 (2013).
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arXiv: 1305.5323

Disordered Bose-Einstein condensates with interaction
R. Seiringer, J. Yngvason, V. Zagrebnov, in:, World Scientific Publishing, 2013, pp. 610–619.
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 Derivation of Ginzburg-Landau theory for a one-dimensional system with contact interaction
R. Frank, C. Hainzl, R. Seiringer, J. Solovej, in:, Springer, 2013, pp. 57–88.
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Aspect-oriented linearizability proofs
T.A. Henzinger, A. Sezgin, V. Vafeiadis, 8052 (2013) 242–256.
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A positive density analogue of the Lieb-Thirring inequality
R. Frank, M. Lewin, É. Lieb, R. Seiringer, Duke Mathematical Journal 162 (2013) 435–495.
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Symmetry of bipolaron bound states for small Coulomb repulsion
R. Frank, É. Lieb, R. Seiringer, Communications in Mathematical Physics 319 (2013) 557–573.
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The excitation spectrum for weakly interacting Bosons in a trap
P. Grech, R. Seiringer, Communications in Mathematical Physics 322 (2013) 559–591.
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Probabilistic models for CRISPR spacer content evolution 
A. Kupczok, J.P. Bollback, BMC Evolutionary Biology 13 (2013) 54–54.
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Complete genome sequence of the novel phage MG- infecting bacillus weihenstephanensis
R.A. Fernandes Redondo, A. Kupczok, G. Stift, J.P. Bollback, Genome Announcements 1 (2013).
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Automating separation logic using SMT
R. Piskac, T. Wies, D. Zufferey, 8044 (2013) 773–789.
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Defining the selectivity of processes along the auxin response chain: A study using auxin analogues
S. Simon, M. Kubes, P. Baster, S. Robert, P. Dobrev, J. Friml, J. Petrásek, E. Zaeímalová, New Phytologist 200 (2013) 1034–1048.
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Automata with generalized Rabin pairs for probabilistic model checking and LTL synthesis
K. Chatterjee, A. Gaiser, J. Kretinsky, 8044 (2013) 559–575.
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arXiv: 1304.5281

Faster algorithms for Markov decision processes with low treewidth
K. Chatterjee, J. aCki, 8044 (2013) 543–558.
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arXiv: 1304.0084

Inhomogeneous cubic congruences and rational points on del Pezzo surfaces
S. Baier, T.D. Browning, Journal Fur Die Reine Und Angewandte Mathematik (2013) 69–151.
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Mechanism of protein kinetic stabilization by engineered disulfide crosslinks
I. Sanchez-Romero, A. Ariza, K. Wilson, M. Skjøt, J. Vind, L. De Maria, L. Skov, J. Sánchez Ruiz, PLoS One 8 (2013).
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Role of the Arabidopsis PIN6 auxin transporter in auxin homeostasis and auxin-mediated development
C. Cazzonelli, M. Vanstraelen, S. Simon, K. Yin, A. Carron Arthur, N. Nisar, G. Tarle, A. Cuttriss, I. Searle, E. Benková, U. Mathesius, J. Masle, J. Friml, B. Pogson, PLoS One 8 (2013).
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Overexpression of the auxin binding PROTEIN1 modulates PIN-dependent auxin transport in tobacco cells
M. covanová, M. Sauer, J. Rychtá, J. Friml, J. Petrásek, E. Zaeímalová, PLoS One 8 (2013).
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Highly adaptive liquid simulations on tetrahedral meshes
R. Ando, N. Thuerey, C. Wojtan, ACM Transactions on Graphics 32 (2013).
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Putting holes in holey geometry: Topology change for arbitrary surfaces
G. Bernstein, C. Wojtan, ACM Transactions on Graphics 32 (2013).
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Liquid surface tracking with error compensation
M. Bojsen-Hansen, C. Wojtan, ACM Transactions on Graphics 32 (2013).
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Three functions of cadherins in cell adhesion
J.-L. Maître, C.-P.J. Heisenberg, Current Biology 23 (2013) 6–3.
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PMID: 23885883

Genetic hitch-hiking in spatially extended populations
N.H. Barton, A. Etheridge, J. Kelleher, A. Véber, Theoretical Population Biology 87 (2013) 75–89.
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Density of Châtelet surfaces failing the Hasse principle
R. De La Bretèche, T.D. Browning, Proceedings of the London Mathematical Society 108 (2013) 1030–1078.
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Formalizing and reasoning about quality
S. Almagor, U. Boker, O. Kupferman, 7966 (2013) 15–27.
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The power of linear programming for finite-valued CSPs: A constructive characterization
V. Kolmogorov, in:, Springer, 2013, pp. 625–636.
LibreCat: https://research-explorer.ista.ac.at/record/2518
DOI: 10.1007/978-3-642-39206-1_53
arXiv: 1207.7213

The supervised IBP: Neighbourhood preserving infinite latent feature models
N. Quadrianto, V. Sharmanska, D. Knowles, Z. Ghahramani, in:, Proceedings of the 29th Conference Uncertainty in Artificial Intelligence, AUAI Press, 2013, pp. 527–536.
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Stability and semiclassics in self-generated fields
L. Erdös, S. Fournais, J. Solovej, Journal of the European Mathematical Society 15 (2013) 2093–2113.
LibreCat: https://research-explorer.ista.ac.at/record/2698
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arXiv: 1105.0506

Delocalization and diffusion profile for random band matrices
L. Erdös, A. Knowles, H. Yau, J. Yin, Communications in Mathematical Physics 323 (2013) 367–416.
LibreCat: https://research-explorer.ista.ac.at/record/2697
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Can quantitative and population genetics help us understand evolutionary computation?
N.H. Barton, T. Paixao, in:, Proceedings of the 15th Annual Conference on Genetic and Evolutionary Computation, ACM, 2013, pp. 1573–1580.
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Accumulation of spontaneous mutations in the ciliate Tetrahymena thermophila
H. Long, T. Paixao, R. Azevedo, R. Zufall, Genetics 195 (2013) 527–540.
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Local eigenvalue density for general MANOVA matrices
L. Erdös, B. Farrell, Journal of Statistical Physics 152 (2013) 1003–1032.
LibreCat: https://research-explorer.ista.ac.at/record/2782
DOI: 10.1007/s10955-013-0807-8
arXiv: 1207.0031

Spectral statistics of Erds-Rényi graphs I: Local semicircle law
L. Erdös, A. Knowles, H. Yau, J. Yin, Annals of Probability 41 (2013) 2279–2375.
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Averaging fluctuations in resolvents of random band matrices
L. Erdös, A. Knowles, H. Yau, Annales Henri Poincare 14 (2013) 1837–1926.
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Extending continuous maps: Polynomiality and undecidability
M. cadek, M. Krcál, J. Matousek, L. Vokínek, U. Wagner, in:, 45th Annual ACM Symposium on Theory of Computing, ACM, 2013, pp. 595–604.
LibreCat: https://research-explorer.ista.ac.at/record/2807
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The moss physcomitrella patens reproductive organ development is highly organized, affected by the two SHI/STY genes and by the level of active auxin in the SHI/STY expression domain
K. Landberg, E. Pederson, T. Viaene, B. Bozorg, J. Friml, H. Jönsson, M. Thelander, E. Sundberg, Plant Physiology 162 (2013) 1406–1419.
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Environmental dependence of genetic constraint
M. de Vos, F. Poelwijk, N. Battich, J. Ndika, S. Tans, PLoS Genetics 9 (2013).
LibreCat: https://research-explorer.ista.ac.at/record/2810
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The complexity of coverage
K. Chatterjee, L. Alfaro, R. Majumdar, International Journal of Foundations of Computer Science 24 (2013) 165–185.
LibreCat: https://research-explorer.ista.ac.at/record/2814
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arXiv: 0804.4525

Nature of laminar-turbulence intermittency in shear flows
M. Avila, B. Hof, Physical Review E 87 (2013).
LibreCat: https://research-explorer.ista.ac.at/record/2811
DOI: 10.1103/PhysRevE.87.063012
arXiv: 1306.5890

Elasto-inertial turbulence
D. Samanta, Y. Dubief, M. Holzner, C. Schäfer, A. Morozov, C. Wagner, B. Hof, PNAS 110 (2013) 10557–10562.
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Homological reconstruction and simplification in 
D. Attali, U. Bauer, O. Devillers, M. Glisse, A. Lieutier, in:, Proceedings of the 29th Annual Symposium on Computational Geometry, ACM, 2013, pp. 117–125.
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Density games
S. Novak, K. Chatterjee, M. Nowak, Journal of Theoretical Biology 334 (2013) 26–34.
LibreCat: https://research-explorer.ista.ac.at/record/2817
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Quantitative timed simulation functions and refinement metrics for real-time systems
K. Chatterjee, V. Prabhu, in:, Proceedings of the 16th International Conference on Hybrid Systems: Computation and Control, Springer, 2013, pp. 273–282.
LibreCat: https://research-explorer.ista.ac.at/record/2819
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Learning quadratic receptive fields from neural responses to natural stimuli
K. Rajan, O. Marre, G. Tkadik, Neural Computation 25 (2013) 1661–1692.
LibreCat: https://research-explorer.ista.ac.at/record/2818
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arXiv: 1209.0121

Mutations in SCO2 are associated with autosomal-dominant high-grade myopia
K. Tran Viet, C. Powell, V. Barathi, T. Klemm, S. Maurer Stroh, V. Limviphuvadh, V. Soler, C. Ho, T. Yanovitch, G. Schneider, Y. Li, E. Nading, R. Metlapally, S. Saw, L. Goh, S. Rozen, T. Young, American Journal of Human Genetics 92 (2013) 820–826.
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PMID: 23643385

3D phenotyping and quantitative trait locus mapping identify core regions of the rice genome controlling root architecture
C. Topp, A. Iyer Pascuzzi, J. Anderson, C. Lee, P. Zurek, O. Symonova, Y. Zheng, A. Bucksch, Y. Mileyko, T. Galkovskyi, B. Moore, J. Harer, H. Edelsbrunner, T. Mitchell Olds, J. Weitz, P. Benfey, PNAS 110 (2013) 95–04.
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A major facilitator superfamily transporter plays a dual role in polar auxin transport and drought stress tolerance in Arabidopsis
E. Remy, T. Cabrito, P. Baster, R. Batista, M. Teixeira, J. Friml, I. Sá Correia, P. Duque, Plant Cell 25 (2013) 901–926.
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Salicylic acid interferes with clathrin-mediated endocytic protein trafficking
Y. Du, R. Tejos, M. Beck, E. Himschoot, H. Li, S. Robatzek, S. Vanneste, J. Friml, PNAS 110 (2013) 7946–7951.
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Cell polarity and patterning by PIN trafficking through early endosomal compartments in arabidopsis thaliana
H. Tanaka, S. Kitakura, H. Rakusová, T. Uemura, M. Feraru, R. De Rycke, S. Robert, T. Kakimoto, J. Friml, PLoS Genetics 9 (2013).
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The complexity of conservative valued CSPs
V. Kolmogorov, S. divný, Journal of the ACM 60 (2013).
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DOI: 10.1145/2450142.2450146
arXiv: 1110.2809

Scale invariance at the onset of turbulence in couette flow
L. Shi, M. Avila, B. Hof, Physical Review Letters 110 (2013).
LibreCat: https://research-explorer.ista.ac.at/record/2829
DOI: 10.1103/PhysRevLett.110.204502
arXiv: 1304.5446

Streamwise-localized solutions at the onset of turbulence in pipe flow
M. Avila, F. Mellibovsky, N. Roland, B. Hof, Physical Review Letters 110 (2013).
LibreCat: https://research-explorer.ista.ac.at/record/2834
DOI: 10.1103/PhysRevLett.110.224502
arXiv: 1212.0230

Inference in two dimensions: Allele frequencies versus lengths of shared sequence blocks
N.H. Barton, A. Etheridge, J. Kelleher, A. Véber, Theoretical Population Biology 87 (2013) 105–119.
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Dyrk1A is dynamically expressed on subsets of motor neurons and in the neuromuscular junction: Possible role in Down syndrome
G. Arquè Fuste, A. Casanovas, M. Dierssen, PLoS One 8 (2013).
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Interstitial dendritic cell guidance by haptotactic chemokine gradients
M. Weber, R. Hauschild, J. Schwarz, C. Moussion, I. de Vries, D. Legler, S. Luther, M.T. Bollenbach, M.K. Sixt, Science 339 (2013) 328–332.
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The local semicircle law for a general class of random matrices
L. Erdös, A. Knowles, H. Yau, J. Yin, Electronic Journal of Probability 18 (2013) 1–58.
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Root ultraviolet b-sensitive1/weak auxin response3 is essential for polar auxin transport in arabidopsis
H. Yu, M. Karampelias, S. Robert, W. Peer, R. Swarup, S. Ye, L. Ge, J. Cohen, A. Murphy, J. Friml, M. Estelle, Plant Physiology 162 (2013) 965–976.
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PMID: 23580592

Assume-guarantee synthesis for digital contract signing
K. Chatterjee, V. Raman, Formal Aspects of Computing 26 (2013) 825–859.
LibreCat: https://research-explorer.ista.ac.at/record/2836
DOI: 10.1007/s00165-013-0283-6
arXiv: 1004.2697

Sex differences in host defence interfere with parasite-mediated selection for outcrossing during host-parasite coevolution
L. El Masri, R. Schulte, N. Timmermeyer, S. Thanisch, L. Crummenerl, G. Jansen, N. Michiels, H. Schulenburg, Ecology Letters 16 (2013) 461–468.
LibreCat: https://research-explorer.ista.ac.at/record/2846
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Strategy improvement for concurrent reachability and turn based stochastic safety games
K. Chatterjee, L. De Alfaro, T.A. Henzinger, Journal of Computer and System Sciences 79 (2013) 640–657.
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The simplest maximum entropy model for collective behavior in a neural network
G. Tkadik, O. Marre, T. Mora, D. Amodei, M. Berry, W. Bialek, Journal of Statistical Mechanics Theory and Experiment 2013 (2013).
LibreCat: https://research-explorer.ista.ac.at/record/2850
DOI: 10.1088/1742-5468/2013/03/P03011
arXiv: 1207.6319

Optical control of ligand-gated ion channels
S. Szobota, C. Mckenzie, H.L. Janovjak, Methods in Molecular Biology 998 (2013) 417–435.
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Dynamic reconfiguration of hippocampal interneuron circuits during spatial learning
D. Dupret, J. O’Neill, J.L. Csicsvari, Neuron 78 (2013) 166–180.
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Mosaic analysis with double markers reveals cell type specific paternal growth dominance
S. Hippenmeyer, R. Johnson, L. Luo, Cell Reports 3 (2013) 960–967.
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Optical control of metabotropic glutamate receptors
J. Levitz, C. Pantoja, B. Gaub, H.L. Janovjak, A. Reiner, A. Hoagland, D. Schoppik, B. Kane, P. Stawski, A. Schier, D. Trauner, E. Isacoff, Nature Neuroscience 16 (2013) 507–516.
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PMID: 23455609

Homology and robustness of level and interlevel sets
P. Bendich, H. Edelsbrunner, D. Morozov, A. Patel, Homology, Homotopy and Applications 15 (2013) 51–72.
LibreCat: https://research-explorer.ista.ac.at/record/2859
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arXiv: 1102.3389

Stimulus-dependent maximum entropy models of neural population codes
E. Granot Atedgi, G. Tkadik, R. Segev, E. Schneidman, PLoS Computational Biology 9 (2013).
LibreCat: https://research-explorer.ista.ac.at/record/2863
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Lethal giant larvae 2 regulates development of the ciliated organ Kupffer’s vesicle
H. Tay, S. Schulze, J. Compagnon, F. Foley, C.-P.J. Heisenberg, H.J. Yost, S. Abdelilah Seyfried, J. Amack, Development 140 (2013) 1550–1559.
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PMID: 23482490

Arabidopsis TWISTED DWAR functionally interacts with auxin exporter ABC on the root plasma membrane
B. Wang, A. Bailly, M. Zwiewk, S. Henrichs, E. Azzarello, S. Mancuso, M. Maeshima, J. Friml, A. Schulz, M. Geisler, Plant Cell 25 (2013) 202–214.
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Auxin reflux between the endodermis and pericycle promotes lateral root initiation
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Asymmetric gibberellin signaling regulates vacuolar trafficking of PIN auxin transporters during root gravitropism
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Cytokinin signaling regulates pavement cell morphogenesis in Arabidopsis
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Controllable-choice message sequence graphs
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Genotypic recognition and spatial responses by rice roots
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Computing the M most probable modes of a graphical model
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3D kinetic alpha complexes and their implementation
M. Kerber, H. Edelsbrunner, in:, 2013 Proceedings of the 15th Workshop on Algorithm Engineering and Experiments, Society of Industrial and Applied Mathematics, 2013, pp. 70–77.
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Coalescent simulation in continuous space
J. Kelleher, N.H. Barton, A. Etheridge, Bioinformatics 29 (2013) 955–956.
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Modelling evolution in a spatial continuum
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Does hybridisation influence speciation?  
N.H. Barton, Journal of Evolutionary Biology 26 (2013) 267–269.
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Recombination and sex
N.H. Barton, in:, The Princeton Guide to Evolution, Princeton University Press, 2013, pp. 328–333.
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Retinal metric: a stimulus distance measure derived from population neural responses
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SCF^TI AFB-auxin signalling regulates PIN vacuolar trafficking and auxin fluxes during root gravitropism
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Neurulation coordinating cell polarisation and lumen formation
J. Compagnon, C.-P.J. Heisenberg, EMBO Journal 32 (2013) 1–3.
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A counterexample to the chain rule for conditional HILL entropy, and what deniable encryption has to do with it
S. Krenn, K.Z. Pietrzak, A. Wadia, in:, A. Sahai (Ed.), Springer, 2013, pp. 23–39.
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Beyond dataset bias: Multi-task unaligned shared knowledge transfer
T. Tommasi, N. Quadrianto, B. Caputo, C. Lampert, 7724 (2013) 1–15.
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Bringing Zero-Knowledge Proofs of Knowledge to Practice
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Add isotropic Gaussian kernels at own risk: More and more resilient modes in higher dimensions
H. Edelsbrunner, B.T. Fasy, G. Rote, Discrete &; Computational Geometry 49 (2013) 797–822.
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