Deriving a genetic regulatory network from an optimization principle
T.R. Sokolowski, T. Gregor, W. Bialek, G. Tkadik, Proceedings of the National Academy of Sciences of the United States of America 122 (2025).

Linking molecular mechanisms to their evolutionary consequences: a primer
R. Grah, C.C. Guet, G. Tkadik, M. Lagator, Genetics 229 (2025).

Chromatin enables precise and scalable gene regulation with factors of limited specificity
M.L. Perkins, J. Crocker, G. Tkadik, Proceedings of the National Academy of Sciences of the United States of America 122 (2025).

Learning reshapes the hippocampal representation hierarchy
H.S.C. Chiossi, M. Nardin, G. Tkadik, J.L. Csicsvari, Proceedings of the National Academy of Sciences 122 (2025).

Information processing in biochemical networks
G. Tkadik, P.R.T. Wolde, Annual Review of Biophysics 54 (2025) 249–274.

Token-driven totally asymmetric simple exclusion processes
B. Kavcic, G. Tkadik, Physical Review E 111 (2025).

Token-driven totally asymmetric simple exclusion processes
G. Tkadik, (2025).

Pulsatile basal gene expression as a fitness determinant in bacteria
K. Jain, R. Hauschild, O. Bochkareva, R. Römhild, G. Tkadik, C.C. Guet, Proceedings of the National Academy of Sciences 122 (2025).

Data for "Pulsatile basal gene expression as a fitness determinant in bacteria"
K. Jain, R. Hauschild, O. Bochkareva, R. Römhild, G. Tkadik, C.C. Guet, (2025).

Information content and optimization of self-organized developmental systems
D. Brückner, G. Tkadik, Proceedings of the National Academy of Sciences of the United States of America 121 (2024).

Assessing the precision of morphogen gradients in neural tube development
M. Zagorski, N. Brandenberg, M. Lutolf, G. Tkadik, M.T. Bollenbach, J. Briscoe, A. Kicheva, Nature Communications 15 (2024).

Quantitative omnigenic model discovers interpretable genome-wide associations
N. Ruzickova, M. Hledik, G. Tkadik, Proceedings of the National Academy of Sciences of the United States of America 121 (2024).

Dynamic pathogen detection and social feedback shape collective hygiene in ants
B.E. Casillas Perez, K. Bodova, A.V. Grasse, G. Tkadik, S. Cremer, Nature Communications 14 (2023).

Statistical modeling of adaptive neural networks explains co-existence of avalanches and oscillations in resting human brain
F. Lombardi, S. Pepic, O. Shriki, G. Tkadik, D. De Martino, Nature Computational Science 3 (2023) 254–263.

Path weight sampling: Exact Monte Carlo computation of the mutual information between stochastic trajectories
M. Reinhardt, G. Tkadik, P.R. Ten Wolde, Physical Review X 13 (2023).

The structure of hippocampal C interactions optimizes spatial coding across experience
M. Nardin, J.L. Csicsvari, G. Tkadik, C. Savin, The Journal of Neuroscience 43 (2023) 8140–8156.

Predicting bacterial promoter function and evolution from random sequences
M. Lagator, S. Sarikas, M. Steinrück, D. Toledo-Aparicio, J.P. Bollback, C.C. Guet, G. Tkadik, ELife 11 (2022).

Accumulation and maintenance of information in evolution
M. Hledik, N.H. Barton, G. Tkadik, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).

Eukaryotic gene regulation at equilibrium, or non?
B. Zoller, T. Gregor, G. Tkadik, Current Opinion in Systems Biology 31 (2022).

Efficient coding theory of dynamic attentional modulation
W.F. Mlynarski, G. Tkadik, PLoS Biology 20 (2022) e3001889.