Using gridCoal to assess whether standard population genetic theory holds in the presence of spatio-temporal heterogeneity in population size
E. Szep, B. Trubenova, K. Csilléry, Molecular Ecology Resources 22 (2022) 2941–2955.

Green beards in the light of indirect genetic effects
B. Trubenova, R. Hager, Ecology and Evolution 9 (2019) 9597–9608.

Surfing on the seascape: Adaptation in a changing environment
B. Trubenova, M. Krejca, P.K. Lehre, T. Kötzing, Evolution 73 (2019) 1356–1374.

How to escape local optima in black box optimisation when non elitism outperforms elitism
P. Oliveto, T. Paixao, J. Pérez Heredia, D. Sudholt, B. Trubenova, Algorithmica 80 (2018) 1604–1633.

Towards a runtime comparison of natural and artificial evolution
T. Paixao, J. Pérez Heredia, D. Sudholt, B. Trubenova, Algorithmica 78 (2017) 681–713.

Selection limits to adaptive walks on correlated landscapes
J. Heredia, B. Trubenova, D. Sudholt, T. Paixao, Genetics 205 (2017) 803–825.

When non-elitism outperforms elitism for crossing fitness valleys
P. Oliveto, T. Paixao, J. Heredia, D. Sudholt, B. Trubenova, in:, Proceedings of the Genetic and Evolutionary Computation Conference 2016 , ACM, 2016, pp. 1163–1170.

Indirect genetic effects and the dynamics of social interactions
B. Trubenova, S. Novak, R. Hager, PLoS One 10 (2015).

Mathematical inference of the results
B. Trubenova, S. Novak, R. Hager, (2015).

Description of the agent based simulations
B. Trubenova, S. Novak, R. Hager, (2015).

Toward a unifying framework for evolutionary processes
T. Paixao, G. Badkobeh, N.H. Barton, D. Çörüf, D. Dang, T. Friedrich, P. Lehre, D. Sudholt, A. Sutton, B. Trubenova,  Journal of Theoretical Biology 383 (2015) 28–43.

First steps towards a runtime comparison of natural and artificial evolution
T. Paixao, D. Sudholt, J. Heredia, B. Trubenova, in:, Proceedings of the 2015 Annual Conference on Genetic and Evolutionary Computation, ACM, 2015, pp. 1455–1462.