V. K. Bett, A. Macon, B. Vicoso, and M. N. Elkrewi, “Chromosome-level assembly of Artemia franciscana sheds light on sex chromosome differentiation,” Genome Biology and Evolution, vol. 16, no. 1. Oxford University Press, 2024.
LibreCat: https://research-explorer.ista.ac.at/record/15009
DOI: 10.1093/gbe/evae006
PMID: 38245839

A. Mrnjavac, K. Khudiakova, N. H. Barton, and B. Vicoso, “Slower-X: Reduced efficiency of selection in the early stages of X chromosome evolution,” Evolution Letters, vol. 7, no. 1. Oxford University Press, 2023.
LibreCat: https://research-explorer.ista.ac.at/record/12521
DOI: 10.1093/evlett/qrac004
WoS: 001021692200001
PMID: 37065438

M. A. Toups and B. Vicoso, “The X chromosome of insects likely predates the origin of class Insecta,” Evolution, vol. 77, no. 11. Oxford University Press, pp. 2504–2511, 2023.
LibreCat: https://research-explorer.ista.ac.at/record/14604
DOI: 10.1093/evolut/qpad169
PMID: 37738212

M. A. Toups and B. Vicoso, “The X chromosome of insects likely predates the origin of Class Insecta.” Dryad, 2023.
LibreCat: https://research-explorer.ista.ac.at/record/14616
DOI: 10.5061/DRYAD.HX3FFBGKT

M. A. Toups and B. Vicoso, “The X chromosome of insects likely predates the origin of Class Insecta.” Zenodo, 2023.
LibreCat: https://research-explorer.ista.ac.at/record/14617
DOI: 10.5281/ZENODO.8138705

G. Puixeu Sala, A. Macon, and B. Vicoso, “Sex-specific estimation of cis and trans regulation of gene expression in heads and gonads of Drosophila melanogaster,” : Genes, Genomes, Genetics, vol. 13, no. 8. Oxford University Press, 2023.
LibreCat: https://research-explorer.ista.ac.at/record/14077
DOI: 10.1093/g3journal/jkad121
WoS: 001002997200001

C. Lasne, M. N. Elkrewi, M. A. Toups, L. A. Layana Franco, A. Macon, and B. Vicoso, “The scorpionfly (Panorpa cognata) genome highlights conserved and derived features of the peculiar dipteran X chromosome,” Molecular Biology and Evolution, vol. 40, no. 12. Oxford University Press, 2023.
LibreCat: https://research-explorer.ista.ac.at/record/14613
DOI: 10.1093/molbev/msad245
PMID: 37988296

R. K. Kelemen, M. N. Elkrewi, A. K. Lindholm, and B. Vicoso, “Novel patterns of expression and recruitment of new genes on the t-haplotype, a mouse selfish chromosome,” Proceedings of the Royal Society B: Biological Sciences, vol. 289, no. 1968. The Royal Society, p. 20211985, 2022.
LibreCat: https://research-explorer.ista.ac.at/record/10767
DOI: 10.1098/rspb.2021.1985
WoS: 000752812800012
PMID: 35135349

M. A. Toups, B. Vicoso, and J. R. Pannell, “Dioecy and chromosomal sex determination are maintained through allopolyploid speciation in the plant genus Mercurialis,” PLoS Genetics, vol. 18, no. 7. Public Library of Science, 2022.
LibreCat: https://research-explorer.ista.ac.at/record/11703
DOI: 10.1371/journal.pgen.1010226
WoS: 000886643100006
PMID: 35793353

M. N. Elkrewi et al., “ZW sex-chromosome evolution and contagious parthenogenesis in Artemia brine shrimp,” Genetics, vol. 222, no. 2. Oxford University Press, 2022.
LibreCat: https://research-explorer.ista.ac.at/record/12248
DOI: 10.1093/genetics/iyac123
WoS: 000850270300001
PMID: 35977389

M. A. L. Picard, B. Vicoso, S. Bertrand, and H. Escriva, “Diversity of modes of reproduction and sex determination systems in invertebrates, and the putative contribution of genetic conflict,” Genes, vol. 12, no. 8. MDPI, 2021.
LibreCat: https://research-explorer.ista.ac.at/record/9908
DOI: 10.3390/genes12081136
WoS: 000690475900001

M. N. Elkrewi, M. A. Moldovan, M. A. L. Picard, and B. Vicoso, “Schistosome W-Linked genes inform temporal dynamics of sex chromosome evolution and suggest candidate for sex determination,” Molecular Biology and Evolution. Oxford University Press , 2021.
LibreCat: https://research-explorer.ista.ac.at/record/10167
DOI: 10.1093/molbev/msab178
WoS: 000741368600009
PMID: 34146097

A. K. Huylmans, A. Macon, F. Hontoria, and B. Vicoso, “Transitions to asexuality and evolution of gene expression in Artemia brine shrimp,” Proceedings of the Royal Society B: Biological Sciences, vol. 288, no. 1959. The Royal Society, 2021.
LibreCat: https://research-explorer.ista.ac.at/record/10166
DOI: 10.1098/rspb.2021.1720
WoS: 000697643700001
PMID: 34547909

B. Vicoso, “Data from Hyulmans et al 2021, ‘Transitions to asexuality and evolution of gene expression in Artemia brine shrimp.’” Institute of Science and Technology Austria, 2021.
LibreCat: https://research-explorer.ista.ac.at/record/9949
DOI: 10.15479/AT:ISTA:9949

W. J. Gammerdinger, M. A. Toups, and B. Vicoso, “Disagreement in FST estimators: A case study from  sex chromosomes,” Molecular Ecology Resources, vol. 20, no. 6. Wiley, pp. 1517–1525, 2020.
LibreCat: https://research-explorer.ista.ac.at/record/8099
DOI: 10.1111/1755-0998.13210
WoS: 000545451200001
PMID: 32543001

M. A. L. Picard et al., “Dosage compensation throughout the Schistosoma mansoni lifecycle: Specific chromatin landscape of the Z chromosome,” Genome biology and evolution, vol. 11, no. 7. Oxford Academic Press, pp. 1909–1922, 2019.
LibreCat: https://research-explorer.ista.ac.at/record/6755
DOI: 10.1093/gbe/evz133
WoS: 000484039500018
PMID: 31273378

B. Vicoso, “Molecular and evolutionary dynamics of animal sex-chromosome turnover,” Nature Ecology &; Evolution, vol. 3, no. 12. Springer Nature, pp. 1632–1641, 2019.
LibreCat: https://research-explorer.ista.ac.at/record/7146
DOI: 10.1038/s41559-019-1050-8
WoS: 000500728800009

A. E. Wright et al., “On the power to detect rare recombination events,” Proceedings of the National Academy of Sciences of the United States of America, vol. 116, no. 26. Proceedings of the National Academy of Sciences, pp. 12607–12608, 2019.
LibreCat: https://research-explorer.ista.ac.at/record/6621
DOI: 10.1073/pnas.1905555116
WoS: 000472719100010
PMID: 31213531

A. K. Huylmans, M. A. Toups, A. Macon, W. J. Gammerdinger, and B. Vicoso, “Sex-biased gene expression and dosage compensation on the Artemia franciscana Z-chromosome,” Genome biology and evolution, vol. 11, no. 4. Oxford University Press, pp. 1033–1044, 2019.
LibreCat: https://research-explorer.ista.ac.at/record/6418
DOI: 10.1093/gbe/evz053
WoS: 000476569800003

B. Vicoso, “Supplementary data for ‘Sex-biased gene expression and dosage compensation on the Artemia franciscana Z-chromosome’ (Huylman, Toups et al., 2019). .” Institute of Science and Technology Austria, 2019.
LibreCat: https://research-explorer.ista.ac.at/record/6060
DOI: 10.15479/AT:ISTA:6060

C. Fraisse, G. Puixeu Sala, and B. Vicoso, “Pleiotropy modulates the efficacy of selection in drosophila melanogaster,” Molecular biology and evolution, vol. 36, no. 3. Oxford University Press, pp. 500–515, 2019.
LibreCat: https://research-explorer.ista.ac.at/record/6089
DOI: 10.1093/molbev/msy246
WoS: 000462585100006
PMID: 30590559

M. A. L. Picard et al., “Evolution of gene dosage on the Z-chromosome of schistosome parasites,” eLife, vol. 7. eLife Sciences Publications, 2018.
LibreCat: https://research-explorer.ista.ac.at/record/131
DOI: 10.7554/eLife.35684
WoS: 000441388200001

B. Vicoso, “Input files and scripts from ‘Evolution of gene dosage on the Z-chromosome of schistosome parasites’ by Picard M.A.L., et al (2018).” Institute of Science and Technology Austria, 2018.
LibreCat: https://research-explorer.ista.ac.at/record/5586
DOI: 10.15479/AT:ISTA:109

R. K. Kelemen and B. Vicoso, “Complex history and differentiation patterns of the t-haplotype, a mouse meiotic driver,” Genetics, vol. 208, no. 1. Genetics Society of America, pp. 365–375, 2018.
LibreCat: https://research-explorer.ista.ac.at/record/542
DOI: 10.1534/genetics.117.300513
WoS: 000419356300024

A. Wright et al., “Convergent recombination suppression suggests role of sexual selection in guppy sex chromosome formation,” Nature Communications, vol. 8. Nature Publishing Group, 2017.
LibreCat: https://research-explorer.ista.ac.at/record/1085
DOI: 10.1038/ncomms14251
WoS: 000392953700001

A. K. Huylmans, A. Macon, and B. Vicoso, “Global dosage compensation is ubiquitous in Lepidoptera, but counteracted by the masculinization of the Z chromosome,” Molecular Biology and Evolution, vol. 34, no. 10. Oxford University Press, pp. 2637–2649, 2017.
LibreCat: https://research-explorer.ista.ac.at/record/945
DOI: 10.1093/molbev/msx190
WoS: 000411814800016

C. Fraisse, M. A. L. Picard, and B. Vicoso, “The deep conservation of the Lepidoptera Z chromosome suggests a non canonical origin of the W,” Nature Communications, vol. 8, no. 1. Nature Publishing Group, 2017.
LibreCat: https://research-explorer.ista.ac.at/record/614
DOI: 10.1038/s41467-017-01663-5
PMID: 29133797

B. Vicoso, “Data for ‘The genomic characterization of the t-haplotype, a mouse meiotic driver, highlights its complex history and specialized biology.’” Institute of Science and Technology Austria, 2017.
LibreCat: https://research-explorer.ista.ac.at/record/5571
DOI: 10.15479/AT:ISTA:78

B. Vicoso, “Code for ‘The genomic characterization of the t-haplotype, a mouse meiotic driver, highlights its complex history and specialized biology.’” Institute of Science and Technology Austria, 2017.
LibreCat: https://research-explorer.ista.ac.at/record/5572
DOI: 10.15479/AT:ISTA:79 

A. Pal and B. Vicoso, “The X chromosome of hemipteran insects: Conservation, dosage compensation and sex-biased expression,” Genome Biology and Evolution, vol. 7, no. 12. Oxford University Press, pp. 3259–3268, 2015.
LibreCat: https://research-explorer.ista.ac.at/record/1513
DOI: 10.1093/gbe/evv215

A. Carvalho, B. Vicoso, C. Russo, B. Swenor, and A. Clark, “Birth of a new gene on the Y chromosome of Drosophila melanogaster,” PNAS, vol. 112, no. 40. National Academy of Sciences, pp. 12450–12455, 2015.
LibreCat: https://research-explorer.ista.ac.at/record/1577
DOI: 10.1073/pnas.1516543112
PMID: 26385968

B. Vicoso and D. Bachtrog, “Numerous transitions of sex chromosomes in Diptera,” PLoS Biology, vol. 13, no. 4. Public Library of Science, 2015.
LibreCat: https://research-explorer.ista.ac.at/record/1684
DOI: 10.1371/journal.pbio.1002078

B. Vicoso and D. Bachtrog, “Reversal of an ancient sex chromosome to an autosome in Drosophila,” Nature, vol. 499, no. 7458. Nature Publishing Group, pp. 332–335, 2013.
LibreCat: https://research-explorer.ista.ac.at/record/1991
DOI: 10.1038/nature12235

B. Vicoso, V. Kaiser, and D. Bachtrog, “Sex biased gene expression at homomorphic sex chromosomes in emus and its implication for sex chromosome evolution,” PNAS, vol. 110, no. 16. National Academy of Sciences, pp. 6453–6458, 2013.
LibreCat: https://research-explorer.ista.ac.at/record/2074
DOI: 10.1073/pnas.1217027110

B. Vicoso, J. Emerson, Y. Zektser, S. Mahajan, and D. Bachtrog, “Comparative sex chromosome genomics in snakes: Differentiation evolutionary strata and lack of global dosage compensation,” PLoS Biology, vol. 11, no. 8. Public Library of Science, 2013.
LibreCat: https://research-explorer.ista.ac.at/record/2076
DOI: 10.1371/journal.pbio.1001643

Q. Zhou et al., “Deciphering neo-sex and B chromosome evolution by the draft genome of Drosophila albomicans,” BMC Genomics, vol. 13, no. 1. BioMed Central, 2012.
LibreCat: https://research-explorer.ista.ac.at/record/2073
DOI: 10.1186/1471-2164-13-109

B. Vicoso and D. Bachtrog, “Lack of global dosage compensation in Schistosoma mansoni, a female-heterogametic parasite,” Genome Biology and Evolution, vol. 3, no. 1. Oxford University Press, pp. 230–235, 2011.
LibreCat: https://research-explorer.ista.ac.at/record/2072
DOI: 10.1093/gbe/evr010

J. Mank, B. Vicoso, S. Berlin, and B. Charlesworth, “Effective population size and the Faster-X effect: Empirical results and their interpretation,” Evolution, vol. 64, no. 3. Wiley-Blackwell, pp. 663–674, 2010.
LibreCat: https://research-explorer.ista.ac.at/record/2071
DOI: 10.1111/j.1558-5646.2009.00853.x

B. Vicoso and B. Charlesworth, “Recombination rates may affect the ratio of X to autosomal noncoding polymorphism in African populations of Drosophila melanogaster,” Genetics, vol. 181, no. 4. Genetics Society of America, pp. 1699–1701, 2009.
LibreCat: https://research-explorer.ista.ac.at/record/2067
DOI: 10.1534/genetics.108.098004

B. Vicoso and B. Charlesworth, “The deficit of male-biased genes on the D. melanogaster X chromosome is expression-dependent: A consequence of dosage compensation?,” Journal of Molecular Evolution, vol. 68, no. 5. Springer, pp. 576–583, 2009.
LibreCat: https://research-explorer.ista.ac.at/record/2068
DOI: 10.1007/s00239-009-9235-4

B. Vicoso and B. Charlesworth, “Effective population size and the faster-X effect: An extended model,” Evolution, vol. 63, no. 9. Wiley-Blackwell, pp. 2413–2426, 2009.
LibreCat: https://research-explorer.ista.ac.at/record/2069
DOI: 10.1111/j.1558-5646.2009.00719.x

B. Vicoso and D. Bachtrog, “Progress and prospects toward our understanding of the evolution of dosage compensation,” Chromosome Research, vol. 17, no. 5. Springer, pp. 585–602, 2009.
LibreCat: https://research-explorer.ista.ac.at/record/2070
DOI: 10.1007/s10577-009-9053-y

B. Vicoso, P. Haddrill, and B. Charlesworth, “A multispecies approach for comparing sequence evolution of X-linked and autosomal sites in Drosophila,” Genetical Research, vol. 90, no. 5. Cambridge University Press, pp. 421–431, 2008.
LibreCat: https://research-explorer.ista.ac.at/record/2065
DOI: 10.1017/S0016672308009804

B. Vicoso and B. Charlesworth, “Evolution on the X chromosome: Unusual patterns and processes,” Nature Reviews Genetics, vol. 7, no. 8. Nature Publishing Group, pp. 645–653, 2006.
LibreCat: https://research-explorer.ista.ac.at/record/2066
DOI: 10.1038/nrg1914