Huljev K, Shamipour S, Nunes Pinheiro DC, Preusser F, Steccari I, Sommer CM, Naik S, Heisenberg C-PJ. 2023. A hydraulic feedback loop between mesendoderm cell migration and interstitial fluid relocalization promotes embryonic axis formation in zebrafish. Developmental Cell. 58(7), 582–596.e7.
LibreCat: https://research-explorer.ista.ac.at/record/12830
DOI: 10.1016/j.devcel.2023.02.016
WoS: 000982111800001

Velicky P, Miguel Villalba E, Michalska JM, Lyudchik J, Wei D, Lin Z, Watson J, Troidl J, Beyer J, Ben Simon Y, Sommer CM, Jahr W, Cenameri A, Broichhagen J, Grant SGN, Jonas PM, Novarino G, Pfister H, Bickel B, Danzl JG. 2023. Dense 4D nanoscale reconstruction of living brain tissue. Nature Methods. 20, 1256–1265.
LibreCat: https://research-explorer.ista.ac.at/record/13267
DOI: 10.1038/s41592-023-01936-6
WoS: 001025621500001
PMID: 37429995

Michalska JM, Lyudchik J, Velicky P, Korinkova H, Watson J, Cenameri A, Sommer CM, Amberg N, Venturino A, Roessler K, Czech T, Höftberger R, Siegert S, Novarino G, Jonas PM, Danzl JG. 2023. Imaging brain tissue architecture across millimeter to nanometer scales. Nature Biotechnology.
LibreCat: https://research-explorer.ista.ac.at/record/14257
DOI: 10.1038/s41587-023-01911-8
WoS: 001065254200001

Johnson AJ, Kaufmann W, Sommer CM, Costanzo T, Dahhan DA, Bednarek SY, Friml J. 2022. Three-dimensional visualization of planta clathrin-coated vesicles at ultrastructural resolution. Molecular Plant. 15(10), 1533–1542.
LibreCat: https://research-explorer.ista.ac.at/record/12239
DOI: 10.1016/j.molp.2022.09.003
WoS: 000882769800009
PMID: 36081349

Hansen AH, Pauler F, Riedl M, Streicher C, Heger A-M, Laukoter S, Sommer CM, Nicolas A, Hof B, Tsai LH, Rülicke T, Hippenmeyer S. 2022. Tissue-wide effects override cell-intrinsic gene function in radial neuron migration. Oxford Open Neuroscience. 1(1), kv.
LibreCat: https://research-explorer.ista.ac.at/record/10791
DOI: 10.1093/oons/kvac009

Radler P, Baranova NS, Dos Santos Caldas PR, Sommer CM, Lopez Pelegrin MD, Michalik D, Loose M. 2022. In vitro reconstitution of Escherichia coli divisome activation. Nature Communications. 13, 2635.
LibreCat: https://research-explorer.ista.ac.at/record/11373
DOI: 10.1038/s41467-022-30301-y
WoS: 000795171100037

Villa CE, Cheroni C, Dotter C, López-Tóbon A, Oliveira B, Sacco R, Yahya AÇ, Morandell J, Gabriele M, Tavakoli M, Lyudchik J, Sommer CM, Gabitto M, Danzl JG, Testa G, Novarino G. 2022. CH haploinsufficiency links autism to transient alterations in excitatory and inhibitory trajectories. Cell Reports. 39(1), 110615.
LibreCat: https://research-explorer.ista.ac.at/record/11160
DOI: 10.1016/j.celrep.2022.110615
WoS: 000785983900003
PMID: 35385734

Velicky P, Miguel Villalba E, Michalska JM, Wei D, Lin Z, Watson J, Troidl J, Beyer J, Ben Simon Y, Sommer CM, Jahr W, Cenameri A, Broichhagen J, Grant SGN, Jonas PM, Novarino G, Pfister H, Bickel B, Danzl JG. Saturated reconstruction of living brain tissue. bioRxiv,10.1101/2022.03.16.484431 .
LibreCat: https://research-explorer.ista.ac.at/record/11943
DOI: 10.1101/2022.03.16.484431

Michalska JM, Lyudchik J, Velicky P, Korinkova H, Watson J, Cenameri A, Sommer CM, Venturino A, Roessler K, Czech T, Siegert S, Novarino G, Jonas PM, Danzl JG. Uncovering brain tissue architecture across scales with super-resolution light microscopy. bioRxiv,10.1101/2022.08.17.504272 .
LibreCat: https://research-explorer.ista.ac.at/record/11950
DOI: 10.1101/2022.08.17.504272

Bajaj S, Bagley JA, Sommer CM, Vertesy A, Nagumo Wong S, Krenn V, Lévi-Strauss J, Knoblich JA. 2021. Neurotransmitter signaling regulates distinct phases of multimodal human interneuron migration. EMBO Journal. 40(23), e108714.
LibreCat: https://research-explorer.ista.ac.at/record/10179
DOI: 10.15252/embj.2021108714
WoS: 000708012800001
PMID: 34661293

Morandell J, Schwarz LA, Basilico B, Tasciyan S, Dimchev GA, Nicolas A, Sommer CM, Kreuzinger C, Dotter C, Knaus L, Dobler Z, Cacci E, Schur FK, Danzl JG, Novarino G. 2021. Cul3 regulates cytoskeleton protein homeostasis and cell migration during a critical window of brain development. Nature Communications. 12(1), 3058.
LibreCat: https://research-explorer.ista.ac.at/record/9429
DOI: 10.1038/s41467-021-23123-x
WoS: 000658769900010

Dos Santos Caldas PR, Radler P, Sommer CM, Loose M. 2020.Computational analysis of filament polymerization dynamics in cytoskeletal networks. In: Methods in Cell Biology. Methods in Cell Biology, vol. 158, 145–161.
LibreCat: https://research-explorer.ista.ac.at/record/7572
DOI: 10.1016/bs.mcb.2020.01.006
WoS: 000611826500008

Morandell J, Schwarz LA, Basilico B, Tasciyan S, Nicolas A, Sommer CM, Kreuzinger C, Knaus L, Dobler Z, Cacci E, Danzl JG, Novarino G. Cul3 regulates cytoskeleton protein homeostasis and cell migration during a critical window of brain development. bioRxiv,10.1101/2020.01.10.902064  .
LibreCat: https://research-explorer.ista.ac.at/record/7800
DOI: 10.1101/2020.01.10.902064 

Truckenbrodt SM, Sommer CM, Rizzoli SO, Danzl JG. 2019. A practical guide to optimization in  expansion microscopy. Nature Protocols. 14(3), 832–863.
LibreCat: https://research-explorer.ista.ac.at/record/6052
DOI: 10.1038/s41596-018-0117-3
WoS: 000459890700008
PMID: 30778205

Sommer CM, Straehle C, Köthe U, Hamprecht FA. 2011. Ilastik: Interactive learning and segmentation toolkit. 2011 IEEE International Symposium on Biomedical Imaging: from Nano to Micro. ISBI: International Symposium on Biomedical Imaging.
LibreCat: https://research-explorer.ista.ac.at/record/9943
DOI: 10.1109/isbi.2011.5872394