Curk S, Krausser J, Meisl G, et al. Self-replication of A;242 aggregates occurs on small and isolated fibril sites. Proceedings of the National Academy of Sciences of the United States of America. 2024;121(7). doi:10.1073/pnas.2220075121
LibreCat: https://research-explorer.ista.ac.at/record/15001
DOI: 10.1073/pnas.2220075121
PMID: 38335256

Giubertoni G, Feng L, Klein K, et al. Elucidating the role of water in collagen self-assembly by isotopically modulating collagen hydration. Proceedings of the National Academy of Sciences of the United States of America. 2024;121(11). doi:10.1073/pnas.2313162121
LibreCat: https://research-explorer.ista.ac.at/record/15116
DOI: 10.1073/pnas.2313162121
PMID: 38451946

Araújo NAM, Janssen LMC, Barois T, et al. Steering self-organisation through confinement. Soft Matter. 2023;19:1695-1704. doi:10.1039/d2sm01562e
LibreCat: https://research-explorer.ista.ac.at/record/12708
DOI: 10.1039/d2sm01562e
WoS: 000940388100001
arXiv: 2204.10059

Hurtig F, Burgers TCQ, Cezanne A, et al. The patterned assembly and stepwise Vp-mediated disassembly of composite ESCRT-III polymers drives archaeal cell division. Science Advances. 2023;9(11). doi:10.1126/sciadv.ade5224
LibreCat: https://research-explorer.ista.ac.at/record/12756
DOI: 10.1126/sciadv.ade5224
WoS: 000968083500010

Azadbakht A, Meadowcroft B, Varkevisser T, Sari A, Kraft DJ. Wrapping pathways of anisotropic dumbbell particles by Giant Unilamellar Vesicles. Nano Letters. 2023;23(10):4267–4273. doi:10.1021/acs.nanolett.3c00375
LibreCat: https://research-explorer.ista.ac.at/record/13094
DOI: 10.1021/acs.nanolett.3c00375
WoS: 000985481400001
PMID: 37141427

Michaels TCT, Qian D, Sari A, Vendruscolo M, Linse S, Knowles TPJ. Amyloid formation as a protein phase transition. Nature Reviews Physics. 2023;5:379–397. doi:10.1038/s42254-023-00598-9
LibreCat: https://research-explorer.ista.ac.at/record/13237
DOI: 10.1038/s42254-023-00598-9
WoS: 001017539800001

Bussi C, Mangiarotti A, Vanhille-Campos CE, et al. Stress granules plug and stabilize damaged endolysosomal membranes. Nature. 2023. doi:10.1038/s41586-023-06726-w
LibreCat: https://research-explorer.ista.ac.at/record/14610
DOI: 10.1038/s41586-023-06726-w
PMID: 37968398

Vanhille-Campos CE, Sari A. Stress granules plug and stabilize damaged endolysosomal membranes. 2023. doi:10.15479/AT:ISTA:14472
LibreCat: https://research-explorer.ista.ac.at/record/14472
DOI: 10.15479/AT:ISTA:14472

Azadbakht A, Meadowcroft B, Majek J, Sari A, Kraft DJ. Nonadditivity in interactions between three membrane-wrapped colloidal spheres. Biophysical Journal. doi:10.1016/j.bpj.2023.12.020
LibreCat: https://research-explorer.ista.ac.at/record/14844
DOI: 10.1016/j.bpj.2023.12.020

Grober D, Palaia I, Ucar MC, Hannezo EB, Sari A, Palacci JA. Unconventional colloidal aggregation in chiral bacterial baths. Nature Physics. 2023;19:1680-1688. doi:10.1038/s41567-023-02136-x
LibreCat: https://research-explorer.ista.ac.at/record/13971
DOI: 10.1038/s41567-023-02136-x
WoS: 001037346400005

Meadowcroft B, Palaia I, Pfitzner AK, Roux A, Baum B, Sari A. Mechanochemical rules for shape-shifting filaments that remodel membranes. Physical Review Letters. 2022;129(26). doi:10.1103/PhysRevLett.129.268101
LibreCat: https://research-explorer.ista.ac.at/record/12108
DOI: 10.1103/PhysRevLett.129.268101
WoS: 000906721500001
PMID: 36608212

Jiang X, Harker-Kirschneck L, Vanhille-Campos CE, et al. Modelling membrane reshaping by staged polymerization of ESCRT-III filaments. PLOS Computational Biology. 2022;18(10). doi:10.1371/journal.pcbi.1010586
LibreCat: https://research-explorer.ista.ac.at/record/12152
DOI: 10.1371/journal.pcbi.1010586
WoS: 000924885500005

Weiffert T, Meisl G, Curk S, et al. Influence of denaturants on amyloid ;242 aggregation kinetics. Frontiers in Neuroscience. 2022;16. doi:10.3389/fnins.2022.943355
LibreCat: https://research-explorer.ista.ac.at/record/12251
DOI: 10.3389/fnins.2022.943355
WoS: 000866287100001

Palaia I, Sari A. Controlling cluster size in 2D phase-separating binary mixtures with specific interactions. The Journal of Chemical Physics. 2022;156(19). doi:10.1063/5.0087769
LibreCat: https://research-explorer.ista.ac.at/record/11400
DOI: 10.1063/5.0087769
WoS: 000797236000004

Toprakcioglu Z, Kamada A, Michaels TCT, et al. Adsorption free energy predicts amyloid protein nucleation rates. Proceedings of the National Academy of Sciences of the United States of America. 2022;119(31). doi:10.1073/pnas.2109718119
LibreCat: https://research-explorer.ista.ac.at/record/11841
DOI: 10.1073/pnas.2109718119
WoS: 000903753500002

Palaia I, Paraschiv A, Debets V, Storm C, Sari A. Durotaxis of passive nanoparticles on elastic membranes. ACS Nano. 2021. doi:10.1021/acsnano.1c02777 
LibreCat: https://research-explorer.ista.ac.at/record/10124
DOI: 10.1021/acsnano.1c02777 
PMID: 34550677 

Harker-Kirschneck L, Hafner AE, Yao T, et al. Physical mechanisms of ESCRT-III-driven cell division in archaea. bioRxiv. doi:10.1101/2021.03.23.436559
LibreCat: https://research-explorer.ista.ac.at/record/10125
DOI: 10.1101/2021.03.23.436559

Paraschiv A, Lagny TJ, Campos CV, Coudrier E, Bassereau P, Sari A. Influence of membrane-cortex linkers on the extrusion of membrane tubes. Biophysical Journal. 2021;120(4):598-606. doi:10.1016/j.bpj.2020.12.028
LibreCat: https://research-explorer.ista.ac.at/record/10340
DOI: 10.1016/j.bpj.2020.12.028
PMID: 33460596

Davis LK, Sari A, Hoogenboom BW, Zilman A. Physical modeling of multivalent interactions in the nuclear pore complex. Biophysical Journal. 2021;120(9):1565-1577. doi:10.1016/j.bpj.2021.01.039
LibreCat: https://research-explorer.ista.ac.at/record/10338
DOI: 10.1016/j.bpj.2021.01.039
PMID: 33617830

Zeng L, Palaia I, Sari A, Su X. PLC;31 promotes phase separation of T cell signaling components. Journal of Cell Biology. 2021;220(6). doi:10.1083/jcb.202009154
LibreCat: https://research-explorer.ista.ac.at/record/10337
DOI: 10.1083/jcb.202009154
PMID: 33929486

Vanhille-Campos C, Sari A. Modelling the dynamics of vesicle reshaping and scission under osmotic shocks. Soft Matter. 2021;17(14):3798-3806. doi:10.1039/d0sm02012e
LibreCat: https://research-explorer.ista.ac.at/record/10339
DOI: 10.1039/d0sm02012e
PMID: 33629089

Krausser J, Knowles TPJ, Sari A. Physical mechanisms of amyloid nucleation on fluid membranes. Proceedings of the National Academy of Sciences. 2020;117(52):33090-33098. doi:10.1073/pnas.2007694117
LibreCat: https://research-explorer.ista.ac.at/record/10336
DOI: 10.1073/pnas.2007694117
PMID: 33328273

Tian X, Leite DM, Scarpa E, et al. On the shuttling across the blood-brain barrier via tubule formation: Mechanism and cargo avidity bias. Science Advances. 2020;6(48). doi:10.1126/sciadv.abc4397
LibreCat: https://research-explorer.ista.ac.at/record/10342
DOI: 10.1126/sciadv.abc4397
PMID: 33246953

Forster JC, Krausser J, Vuyyuru MR, Baum B, Sari A. Exploring the design rules for efficient membrane-reshaping nanostructures. Physical Review Letters. 2020;125(22). doi:10.1103/physrevlett.125.228101
LibreCat: https://research-explorer.ista.ac.at/record/10344
DOI: 10.1103/physrevlett.125.228101
PMID: 33315453

Debets VE, Janssen LMC, Sari A. Characterising the diffusion of biological nanoparticles on fluid and cross-linked membranes. Soft Matter. 2020;16(47):10628-10639. doi:10.1039/d0sm00712a
LibreCat: https://research-explorer.ista.ac.at/record/10341
DOI: 10.1039/d0sm00712a
PMID: 33084724

Hafner AE, Gyori NG, Bench CA, Davis LK, Sari A. Modeling fibrillogenesis of collagen-mimetic molecules. Biophysical Journal. 2020;119(9):1791-1799. doi:10.1016/j.bpj.2020.09.013
LibreCat: https://research-explorer.ista.ac.at/record/10346
DOI: 10.1016/j.bpj.2020.09.013
PMID: 33049216

Dear AJ, Meisl G, Sari A, et al. Identification of on- and off-pathway oligomers in amyloid fibril formation. Chemical Science. 2020;11(24):6236-6247. doi:10.1039/c9sc06501f
LibreCat: https://research-explorer.ista.ac.at/record/10350
DOI: 10.1039/c9sc06501f
PMID: 32953019

Tarrason Risa G, Hurtig F, Bray S, et al. The proteasome controls ESCRT-III–mediated cell division in an archaeon. Science. 2020;369(6504). doi:10.1126/science.aaz2532
LibreCat: https://research-explorer.ista.ac.at/record/10349
DOI: 10.1126/science.aaz2532
PMID: 32764038

Michaels TCT, Sari A, Meisl G, et al. Thermodynamic and kinetic design principles for amyloid-aggregation inhibitors. Proceedings of the National Academy of Sciences. 2020;117(39):24251-24257. doi:10.1073/pnas.2006684117
LibreCat: https://research-explorer.ista.ac.at/record/10347
DOI: 10.1073/pnas.2006684117
PMID: 32929030

Michaels TCT, Sari A, Curk S, et al. Dynamics of oligomer populations formed during the aggregation of Alzheimer’s A;242 peptide. Nature Chemistry. 2020;12(5):445-451. doi:10.1038/s41557-020-0452-1
LibreCat: https://research-explorer.ista.ac.at/record/10351
DOI: 10.1038/s41557-020-0452-1
PMID: 32303714

Pfitzner A-K, Mercier V, Jiang X, et al. An ESCRT-III polymerization sequence drives membrane deformation and fission. Cell. 2020;182(5):1140-1155.e18. doi:10.1016/j.cell.2020.07.021
LibreCat: https://research-explorer.ista.ac.at/record/10348
DOI: 10.1016/j.cell.2020.07.021
PMID: 32814015

Davis LK, Ford IJ, Sari A, Hoogenboom BW. Intrinsically disordered nuclear pore proteins show ideal-polymer morphologies and dynamics. Physical Review E. 2020;101(2). doi:10.1103/physreve.101.022420
LibreCat: https://research-explorer.ista.ac.at/record/10352
DOI: 10.1103/physreve.101.022420
PMID: 32168597

Paraschiv A, Hegde S, Ganti R, Pilizota T, Sari A. Dynamic clustering regulates activity of mechanosensitive membrane channels. Physical Review Letters. 2020;124(4). doi:10.1103/physrevlett.124.048102
LibreCat: https://research-explorer.ista.ac.at/record/10353
DOI: 10.1103/physrevlett.124.048102
PMID: 32058787

Harker-Kirschneck L, Baum B, Sari A. Changes in ESCRT-III filament geometry drive membrane remodelling and fission in silico. BMC Biology. 2019;17(1). doi:10.1186/s12915-019-0700-2
LibreCat: https://research-explorer.ista.ac.at/record/10354
DOI: 10.1186/s12915-019-0700-2
PMID: 31640700

Hafner AE, Krausser J, Sari A. Minimal coarse-grained models for molecular self-organisation in biology. Current Opinion in Structural Biology. 2019;58:43-52. doi:10.1016/j.sbi.2019.05.018
LibreCat: https://research-explorer.ista.ac.at/record/10355
DOI: 10.1016/j.sbi.2019.05.018
PMID: 31226513

Fisher PDE, Shen Q, Akpinar B, et al. A Programmable DNA origami platform for organizing intrinsically disordered nucleoporins within nanopore confinement. ACS Nano. 2018;12(2):1508-1518. doi:10.1021/acsnano.7b08044
LibreCat: https://research-explorer.ista.ac.at/record/10362
DOI: 10.1021/acsnano.7b08044
PMID: 29350911

Cohen SIA, Cukalevski R, Michaels TCT, et al. Distinct thermodynamic signatures of oligomer generation in the aggregation of the amyloid-;2 peptide. Nature Chemistry. 2018;10(5):523-531. doi:10.1038/s41557-018-0023-x
LibreCat: https://research-explorer.ista.ac.at/record/10360
DOI: 10.1038/s41557-018-0023-x
PMID: 29581486

Dear AJ, Sari A, Michaels TCT, Dobson CM, Knowles TPJ. Statistical mechanics of globular oligomer formation by protein molecules. The Journal of Physical Chemistry B. 2018;122(49):11721-11730. doi:10.1021/acs.jpcb.8b07805
LibreCat: https://research-explorer.ista.ac.at/record/10357
DOI: 10.1021/acs.jpcb.8b07805
PMID: 30336667

Curk T, Wirnsberger P, Dobnikar J, Frenkel D, Sari A. Controlling cargo trafficking in multicomponent membranes. Nano Letters. 2018;18(9):5350-5356. doi:10.1021/acs.nanolett.8b00786
LibreCat: https://research-explorer.ista.ac.at/record/10359
DOI: 10.1021/acs.nanolett.8b00786
PMID: 29667410

Michaels TCT, Liu LX, Curk S, Bolhuis PG, Sari A, Knowles TPJ. Reaction rate theory for supramolecular kinetics: application to protein aggregation. Molecular Physics. 2018;116(21-22):3055-3065. doi:10.1080/00268976.2018.1474280
LibreCat: https://research-explorer.ista.ac.at/record/10358
DOI: 10.1080/00268976.2018.1474280
arXiv: 1803.04851

Michaels TCT, Sari A, Habchi J, et al. Chemical kinetics for bridging molecular mechanisms and macroscopic measurements of amyloid fibril formation. Annual Review of Physical Chemistry. 2018;69(1):273-298. doi:10.1146/annurev-physchem-050317-021322
LibreCat: https://research-explorer.ista.ac.at/record/10361
DOI: 10.1146/annurev-physchem-050317-021322
PMID: 29490200

Vahid Belarghou A, Sari A, Idema T. Curvature mediated interactions in highly curved membranes. Biophysical Journal. 2017;112(3). doi:10.1016/j.bpj.2016.11.2123
LibreCat: https://research-explorer.ista.ac.at/record/10126
DOI: 10.1016/j.bpj.2016.11.2123

Helle SCJ, Feng Q, Aebersold MJ, et al. Mechanical force induces mitochondrial fission. eLife. 2017;6. doi:10.7554/elife.30292
LibreCat: https://research-explorer.ista.ac.at/record/10370
DOI: 10.7554/elife.30292
PMID: 29119945

Simunovic M, Sari A, Henderson JM, Lee KYC, Voth GA. Long-range organization of membrane-curving proteins. ACS Central Science. 2017;3(12):1246-1253. doi:10.1021/acscentsci.7b00392
LibreCat: https://research-explorer.ista.ac.at/record/10369
DOI: 10.1021/acscentsci.7b00392
PMID: 29296664

Wirnsberger P, Fijan D, Lightwood RA, Sari A, Dellago C, Frenkel D. Numerical evidence for thermally induced monopoles. Proceedings of the National Academy of Sciences. 2017;114(19):4911-4914. doi:10.1073/pnas.1621494114
LibreCat: https://research-explorer.ista.ac.at/record/10373
DOI: 10.1073/pnas.1621494114
PMID: 28439003
arXiv: 1610.06840

Meisl G, Rajah L, Cohen SAI, et al. Scaling behaviour and rate-determining steps in filamentous self-assembly. Chemical Science. 2017;8(10):7087-7097. doi:10.1039/c7sc01965c
LibreCat: https://research-explorer.ista.ac.at/record/10374
DOI: 10.1039/c7sc01965c
PMID: 29147538

Vahid A, Sari A, Idema T. Curvature variation controls particle aggregation on fluid vesicles. Soft Matter. 2017;13(28):4924-4930. doi:10.1039/c7sm00433h
LibreCat: https://research-explorer.ista.ac.at/record/10375
DOI: 10.1039/c7sm00433h
PMID: 28677712
arXiv: 1703.00776

van der Wel C, Vahid A, Sari A, Idema T, Heinrich D, Kraft DJ. Lipid membrane-mediated attraction between curvature inducing objects. Scientific Reports. 2016;6(1). doi:10.1038/srep32825
LibreCat: https://research-explorer.ista.ac.at/record/10377
DOI: 10.1038/srep32825
PMID: 27618764
arXiv: 1603.04644

Sari A, Michaels TCT, Zaccone A, Knowles TPJ, Frenkel D. Kinetics of spontaneous filament nucleation via oligomers: Insights from theory and simulation. The Journal of Chemical Physics. 2016;145(21). doi:10.1063/1.4965040
LibreCat: https://research-explorer.ista.ac.at/record/10376
DOI: 10.1063/1.4965040
PMID: 28799382
arXiv: 1610.02320

Wirnsberger P, Fijan D, Sari A, Neumann M, Dellago C, Frenkel D. Non-equilibrium simulations of thermally induced electric fields in water. The Journal of Chemical Physics. 2016;144(22). doi:10.1063/1.4953036
LibreCat: https://research-explorer.ista.ac.at/record/10380
DOI: 10.1063/1.4953036
PMID: 27305991
arXiv: 1602.02734

Bachmann SJ, Kotar J, Parolini L, et al. Melting transition in lipid vesicles functionalised by mobile DNA linkers. Soft Matter. 2016;12(37):7804-7817. doi:10.1039/c6sm01515h
LibreCat: https://research-explorer.ista.ac.at/record/10381
DOI: 10.1039/c6sm01515h
PMID: 27722701
arXiv: 1608.05788

Sari A, Buell AK, Meisl G, et al. Physical determinants of the self-replication of protein fibrils. Nature Physics. 2016;12(9):874-880. doi:10.1038/nphys3828
LibreCat: https://research-explorer.ista.ac.at/record/10378
DOI: 10.1038/nphys3828
PMID: 31031819

Sari A, Chebaro YC, Knowles TPJ, Frenkel D. Crucial role of nonspecific interactions in amyloid nucleation. Proceedings of the National Academy of Sciences. 2014;111(50):17869-17874. doi:10.1073/pnas.1410159111
LibreCat: https://research-explorer.ista.ac.at/record/10382
DOI: 10.1073/pnas.1410159111
PMID: 25453085
arXiv: 1412.0897

Mallory SA, Sari A, Valeriani C, Cacciuto A. Anomalous thermomechanical properties of a self-propelled colloidal fluid. Physical Review E. 2014;89(5). doi:10.1103/physreve.89.052303
LibreCat: https://research-explorer.ista.ac.at/record/10383
DOI: 10.1103/physreve.89.052303
PMID: 25353796
arXiv: 1310.0826

Mognetti BM, Sari A, Angioletti-Uberti S, Cacciuto A, Valeriani C, Frenkel D. Living clusters and crystals from low-density suspensions of active colloids. Physical Review Letters. 2013;111(24). doi:10.1103/physrevlett.111.245702
LibreCat: https://research-explorer.ista.ac.at/record/10384
DOI: 10.1103/physrevlett.111.245702
PMID: 24483677
arXiv: 1311.4681

Sari A, Cacciuto A. Self-assembly of nanoparticles adsorbed on fluid and elastic membranes. Soft Matter. 2013;9(29). doi:10.1039/c3sm50188d
LibreCat: https://research-explorer.ista.ac.at/record/10386
DOI: 10.1039/c3sm50188d

Napoli JA, Sari A, Cacciuto A. Collapsing nanoparticle-laden nanotubes. Soft Matter. 2013;9(37):8881-8886. doi:10.1039/c3sm51495a
LibreCat: https://research-explorer.ista.ac.at/record/10385
DOI: 10.1039/c3sm51495a

Sari A, Cacciuto A. Mechanism of membrane tube formation induced by adhesive nanocomponents. Physical Review Letters. 2012;109(18). doi:10.1103/physrevlett.109.188101
LibreCat: https://research-explorer.ista.ac.at/record/10387
DOI: 10.1103/physrevlett.109.188101
PMID: 23215334
arXiv: 1206.3528

Sari A, Cacciuto A. Fluid membranes can drive linear aggregation of adsorbed spherical nanoparticles. Physical Review Letters. 2012;108(11). doi:10.1103/physrevlett.108.118101
LibreCat: https://research-explorer.ista.ac.at/record/10388
DOI: 10.1103/physrevlett.108.118101
PMID: 22540513
arXiv: 1201.0036

Sari A, Cacciuto A. Soft elastic surfaces as a platform for particle self-assembly. Soft Matter. 2011;7(18). doi:10.1039/c1sm05773a
LibreCat: https://research-explorer.ista.ac.at/record/10389
DOI: 10.1039/c1sm05773a
arXiv: 1106.2995

Sari A, Hrenar T, Malis M, Dosli N. Quantum mechanical study of secondary structure formation in protected dipeptides. Physical Chemistry Chemical Physics. 2010;12(18):4678-4685. doi:10.1039/b923041f
LibreCat: https://research-explorer.ista.ac.at/record/10128
DOI: 10.1039/b923041f
PMID: 20428547

Sari A, Cacciuto A. Particle self-assembly on soft elastic shells. Soft Matter. 2010;7(5):1874-1878. doi:10.1039/c0sm01143f
LibreCat: https://research-explorer.ista.ac.at/record/10127
DOI: 10.1039/c0sm01143f
arXiv: 1010.2453

Sari A, Bozorgui B, Cacciuto A. Packing of soft asymmetric dumbbells. The Journal of Physical Chemistry B. 2010;115(22):7182-7189. doi:10.1021/jp107545w
LibreCat: https://research-explorer.ista.ac.at/record/10390
DOI: 10.1021/jp107545w
PMID: 20949934
arXiv: 1010.2458

Sari A, Pàmies JC, Cacciuto A. Effective elasticity of a flexible filament bound to a deformable cylindrical surface. Physical Review Letters. 2010;104(22). doi:10.1103/physrevlett.104.226101
LibreCat: https://research-explorer.ista.ac.at/record/10391
DOI: 10.1103/physrevlett.104.226101
PMID: 20867183
arXiv: 1005.2429

Sari A, Vrdek V, Bühl M. Density functional study of protonated formylmetallocenes. Organometallics. 2008;27(3):394-401. doi:10.1021/om700916f
LibreCat: https://research-explorer.ista.ac.at/record/10392
DOI: 10.1021/om700916f