Curk, Samo, Johannes Krausser, Georg Meisl, Daan Frenkel, Sara Linse, Thomas C.T. Michaels, Tuomas P.J. Knowles, and Anela Sari. “Self-Replication of A;242 Aggregates Occurs on Small and Isolated Fibril Sites.”https://doi.org/10.1073/pnas.2220075121__Proceedings of the National Academy of Sciences of the United States of America. Proceedings of the National Academy of Sciences, 2024.https://doi.org/10.1073/pnas.2220075121 .

Giubertoni, Giulia, Liru Feng, Kevin Klein, Guido Giannetti, Luco Rutten, Yeji Choi, Anouk Van Der Net, et al. “Elucidating the Role of Water in Collagen Self-Assembly by Isotopically Modulating Collagen Hydration.”https://doi.org/10.1073/pnas.2313162121__Proceedings of the National Academy of Sciences of the United States of America. Proceedings of the National Academy of Sciences, 2024.https://doi.org/10.1073/pnas.2313162121 .

Araújo, Nuno A.M., Liesbeth M.C. Janssen, Thomas Barois, Guido Boffetta, Itai Cohen, Alessandro Corbetta, Olivier Dauchot, et al. “Steering Self-Organisation through Confinement.”https://doi.org/10.1039/d2sm01562e__Soft Matter. Royal Society of Chemistry, 2023.https://doi.org/10.1039/d2sm01562e .

Hurtig, Fredrik, Thomas C.Q. Burgers, Alice Cezanne, Xiuyun Jiang, Frank N. Mol, Jovan Trapari, Andre Arashiro Pulschen, et al. “The Patterned Assembly and Stepwise Vp-Mediated Disassembly of Composite ESCRT-III Polymers Drives Archaeal Cell Division.”https://doi.org/10.1126/sciadv.ade5224__Science Advances. American Association for the Advancement of Science, 2023.https://doi.org/10.1126/sciadv.ade5224 .

Azadbakht, Ali, Billie Meadowcroft, Thijs Varkevisser, Anela Sari, and Daniela J. Kraft. “Wrapping Pathways of Anisotropic Dumbbell Particles by Giant Unilamellar Vesicles.”https://doi.org/10.1021/acs.nanolett.3c00375__Nano Letters. American Chemical Society, 2023.https://doi.org/10.1021/acs.nanolett.3c00375 .

Michaels, Thomas C.T., Daoyuan Qian, Anela Sari, Michele Vendruscolo, Sara Linse, and Tuomas P.J. Knowles. “Amyloid Formation as a Protein Phase Transition.”https://doi.org/10.1038/s42254-023-00598-9__Nature Reviews Physics. Springer Nature, 2023.https://doi.org/10.1038/s42254-023-00598-9 .

Bussi, Claudio, Agustín Mangiarotti, Christian Eduardo Vanhille-Campos, Beren Aylan, Enrica Pellegrino, Natalia Athanasiadi, Antony Fearns, et al. “Stress Granules Plug and Stabilize Damaged Endolysosomal Membranes.”https://doi.org/10.1038/s41586-023-06726-w__Nature. Springer Nature, 2023.https://doi.org/10.1038/s41586-023-06726-w .

Vanhille-Campos, Christian Eduardo, and Anela Sari. “Stress Granules Plug and Stabilize Damaged Endolysosomal Membranes.”https://doi.org/10.15479/AT:ISTA:14472__Institute of Science and Technology Austria, 2023.https://doi.org/10.15479/AT:ISTA:14472 .

Azadbakht, Ali, Billie Meadowcroft, Juraj Majek, Anela Sari, and Daniela J. Kraft. “Nonadditivity in Interactions between Three Membrane-Wrapped Colloidal Spheres.”https://doi.org/10.1016/j.bpj.2023.12.020__Biophysical Journal. Elsevier, n.d.https://doi.org/10.1016/j.bpj.2023.12.020 .

Grober, Daniel, Ivan Palaia, Mehmet C Ucar, Edouard B Hannezo, Anela Sari, and Jérémie A Palacci. “Unconventional Colloidal Aggregation in Chiral Bacterial Baths.”https://doi.org/10.1038/s41567-023-02136-x__Nature Physics. Springer Nature, 2023.https://doi.org/10.1038/s41567-023-02136-x .

Meadowcroft, Billie, Ivan Palaia, Anna Katharina Pfitzner, Aurélien Roux, Buzz Baum, and Anela Sari. “Mechanochemical Rules for Shape-Shifting Filaments That Remodel Membranes.”https://doi.org/10.1103/PhysRevLett.129.268101__Physical Review Letters. American Physical Society, 2022.https://doi.org/10.1103/PhysRevLett.129.268101 .

Jiang, Xiuyun, Lena Harker-Kirschneck, Christian Eduardo Vanhille-Campos, Anna-Katharina Pfitzner, Elene Lominadze, Aurélien Roux, Buzz Baum, and Anela Sari. “Modelling Membrane Reshaping by Staged Polymerization of ESCRT-III Filaments.”https://doi.org/10.1371/journal.pcbi.1010586__PLOS Computational Biology. Public Library of Science, 2022.https://doi.org/10.1371/journal.pcbi.1010586 .

Weiffert, Tanja, Georg Meisl, Samo Curk, Risto Cukalevski, Anela Sari, Tuomas P. J. Knowles, and Sara Linse. “Influence of Denaturants on Amyloid 2 Aggregation Kinetics.”https://doi.org/10.3389/fnins.2022.943355__Frontiers in Neuroscience. Frontiers Media, 2022.https://doi.org/10.3389/fnins.2022.943355 .

Palaia, Ivan, and Anela Sari. “Controlling Cluster Size in 2D Phase-Separating Binary Mixtures with Specific Interactions.”https://doi.org/10.1063/5.0087769__The Journal of Chemical Physics. AIP Publishing, 2022.https://doi.org/10.1063/5.0087769 .

Toprakcioglu, Zenon, Ayaka Kamada, Thomas C.T. Michaels, Mengqi Xie, Johannes Krausser, Jiapeng Wei, Anela Sari, Michele Vendruscolo, and Tuomas P.J. Knowles. “Adsorption Free Energy Predicts Amyloid Protein Nucleation Rates.”https://doi.org/10.1073/pnas.2109718119__Proceedings of the National Academy of Sciences of the United States of America. Proceedings of the National Academy of Sciences, 2022.https://doi.org/10.1073/pnas.2109718119 .

Palaia, Ivan, Alexandru Paraschiv, Vincent Debets, Cornelis Storm, and Anela Sari. “Durotaxis of Passive Nanoparticles on Elastic Membranes.”https://doi.org/10.1021/acsnano.1c02777 __ACS Nano. American Chemical Society, 2021.https://doi.org/10.1021/acsnano.1c02777  .

Harker-Kirschneck, L., A. E. Hafner, T. Yao, A. Pulschen, F. Hurtig, C. Vanhille-Campos, D. Hryniuk, et al. “Physical Mechanisms of ESCRT-III-Driven Cell Division in Archaea.”https://doi.org/10.1101/2021.03.23.436559__BioRxiv. Cold Spring Harbor Laboratory, n.d.https://doi.org/10.1101/2021.03.23.436559 .

Paraschiv, Alexandru, Thibaut J. Lagny, Christian Vanhille Campos, Evelyne Coudrier, Patricia Bassereau, and Anela Sari. “Influence of Membrane-Cortex Linkers on the Extrusion of Membrane Tubes.”https://doi.org/10.1016/j.bpj.2020.12.028__Biophysical Journal. Cell Press, 2021.https://doi.org/10.1016/j.bpj.2020.12.028 .

Davis, Luke K., Anela Sari, Bart W. Hoogenboom, and Anton Zilman. “Physical Modeling of Multivalent Interactions in the Nuclear Pore Complex.”https://doi.org/10.1016/j.bpj.2021.01.039__Biophysical Journal. Elsevier, 2021.https://doi.org/10.1016/j.bpj.2021.01.039 .

Zeng, Longhui, Ivan Palaia, Anela Sari, and Xiaolei Su. “PLC;31 Promotes Phase Separation of T Cell Signaling Components.”https://doi.org/10.1083/jcb.202009154__Journal of Cell Biology. Rockefeller University Press, 2021.https://doi.org/10.1083/jcb.202009154 .

Vanhille-Campos, Christian, and Anela Sari. “Modelling the Dynamics of Vesicle Reshaping and Scission under Osmotic Shocks.”https://doi.org/10.1039/d0sm02012e__Soft Matter. Royal Society of Chemistry, 2021.https://doi.org/10.1039/d0sm02012e .

Krausser, Johannes, Tuomas P. J. Knowles, and Anela Sari. “Physical Mechanisms of Amyloid Nucleation on Fluid Membranes.”https://doi.org/10.1073/pnas.2007694117__Proceedings of the National Academy of Sciences. National Academy of Sciences, 2020.https://doi.org/10.1073/pnas.2007694117 .

Tian, Xiaohe, Diana M. Leite, Edoardo Scarpa, Sophie Nyberg, Gavin Fullstone, Joe Forth, Diana Matias, et al. “On the Shuttling across the Blood-Brain Barrier via Tubule Formation: Mechanism and Cargo Avidity Bias.”https://doi.org/10.1126/sciadv.abc4397__Science Advances. American Association for the Advancement of Science, 2020.https://doi.org/10.1126/sciadv.abc4397 .

Forster, Joel C., Johannes Krausser, Manish R. Vuyyuru, Buzz Baum, and Anela Sari. “Exploring the Design Rules for Efficient Membrane-Reshaping Nanostructures.”https://doi.org/10.1103/physrevlett.125.228101__Physical Review Letters. American Physical Society, 2020.https://doi.org/10.1103/physrevlett.125.228101 .

Debets, V. E., L. M. C. Janssen, and Anela Sari. “Characterising the Diffusion of Biological Nanoparticles on Fluid and Cross-Linked Membranes.”https://doi.org/10.1039/d0sm00712a__Soft Matter. Royal Society of Chemistry, 2020.https://doi.org/10.1039/d0sm00712a .

Hafner, Anne E., Noemi G. Gyori, Ciaran A. Bench, Luke K. Davis, and Anela Sari. “Modeling Fibrillogenesis of Collagen-Mimetic Molecules.”https://doi.org/10.1016/j.bpj.2020.09.013__Biophysical Journal. Cell Press, 2020.https://doi.org/10.1016/j.bpj.2020.09.013 .

Dear, Alexander J., Georg Meisl, Anela Sari, Thomas C. T. Michaels, Magnus Kjaergaard, Sara Linse, and Tuomas P. J. Knowles. “Identification of On- and off-Pathway Oligomers in Amyloid Fibril Formation.”https://doi.org/10.1039/c9sc06501f__Chemical Science. Royal Society of Chemistry, 2020.https://doi.org/10.1039/c9sc06501f .

Tarrason Risa, Gabriel, Fredrik Hurtig, Sian Bray, Anne E. Hafner, Lena Harker-Kirschneck, Peter Faull, Colin Davis, et al. “The Proteasome Controls ESCRT-III–Mediated Cell Division in an Archaeon.”https://doi.org/10.1126/science.aaz2532__Science. American Association for the Advancement of Science, 2020.https://doi.org/10.1126/science.aaz2532 .

Michaels, Thomas C. T., Anela Sari, Georg Meisl, Gabriella T. Heller, Samo Curk, Paolo Arosio, Sara Linse, Christopher M. Dobson, Michele Vendruscolo, and Tuomas P. J. Knowles. “Thermodynamic and Kinetic Design Principles for Amyloid-Aggregation Inhibitors.”https://doi.org/10.1073/pnas.2006684117__Proceedings of the National Academy of Sciences. National Academy of Sciences, 2020.https://doi.org/10.1073/pnas.2006684117 .

Michaels, Thomas C. T., Anela Sari, Samo Curk, Katja Bernfur, Paolo Arosio, Georg Meisl, Alexander J. Dear, et al. “Dynamics of Oligomer Populations Formed during the Aggregation of Alzheimer’s A;242 Peptide.”https://doi.org/10.1038/s41557-020-0452-1__Nature Chemistry. Springer Nature, 2020.https://doi.org/10.1038/s41557-020-0452-1 .

Pfitzner, Anna-Katharina, Vincent Mercier, Xiuyun Jiang, Joachim Moser von Filseck, Buzz Baum, Anela Sari, and Aurélien Roux. “An ESCRT-III Polymerization Sequence Drives Membrane Deformation and Fission.”https://doi.org/10.1016/j.cell.2020.07.021__Cell. Elsevier, 2020.https://doi.org/10.1016/j.cell.2020.07.021 .

Davis, Luke K., Ian J. Ford, Anela Sari, and Bart W. Hoogenboom. “Intrinsically Disordered Nuclear Pore Proteins Show Ideal-Polymer Morphologies and Dynamics.”https://doi.org/10.1103/physreve.101.022420__Physical Review E. American Physical Society, 2020.https://doi.org/10.1103/physreve.101.022420 .

Paraschiv, Alexandru, Smitha Hegde, Raman Ganti, Teuta Pilizota, and Anela Sari. “Dynamic Clustering Regulates Activity of Mechanosensitive Membrane Channels.”https://doi.org/10.1103/physrevlett.124.048102__Physical Review Letters. American Physical Society, 2020.https://doi.org/10.1103/physrevlett.124.048102 .

Harker-Kirschneck, Lena, Buzz Baum, and Anela Sari. “Changes in ESCRT-III Filament Geometry Drive Membrane Remodelling and Fission in Silico.”https://doi.org/10.1186/s12915-019-0700-2__BMC Biology. Springer Nature, 2019.https://doi.org/10.1186/s12915-019-0700-2 .

Hafner, Anne E, Johannes Krausser, and Anela Sari. “Minimal Coarse-Grained Models for Molecular Self-Organisation in Biology.”https://doi.org/10.1016/j.sbi.2019.05.018__Current Opinion in Structural Biology. Elsevier, 2019.https://doi.org/10.1016/j.sbi.2019.05.018 .

Fisher, Patrick D. Ellis, Qi Shen, Bernice Akpinar, Luke K. Davis, Kenny Kwok Hin Chung, David Baddeley, Anela Sari, et al. “A Programmable DNA Origami Platform for Organizing Intrinsically Disordered Nucleoporins within Nanopore Confinement.”https://doi.org/10.1021/acsnano.7b08044__ACS Nano. American Chemical Society, 2018.https://doi.org/10.1021/acsnano.7b08044 .

Cohen, Samuel I. A., Risto Cukalevski, Thomas C. T. Michaels, Anela Sari, Mattias Törnquist, Michele Vendruscolo, Christopher M. Dobson, Alexander K. Buell, Tuomas P. J. Knowles, and Sara Linse. “Distinct Thermodynamic Signatures of Oligomer Generation in the Aggregation of the Amyloid-;2 Peptide.”https://doi.org/10.1038/s41557-018-0023-x__Nature Chemistry. Springer Nature, 2018.https://doi.org/10.1038/s41557-018-0023-x .

Dear, Alexander J., Anela Sari, Thomas C. T. Michaels, Christopher M. Dobson, and Tuomas P. J. Knowles. “Statistical Mechanics of Globular Oligomer Formation by Protein Molecules.”https://doi.org/10.1021/acs.jpcb.8b07805__The Journal of Physical Chemistry B. American Chemical Society, 2018.https://doi.org/10.1021/acs.jpcb.8b07805 .

Curk, Tine, Peter Wirnsberger, Jure Dobnikar, Daan Frenkel, and Anela Sari. “Controlling Cargo Trafficking in Multicomponent Membranes.”https://doi.org/10.1021/acs.nanolett.8b00786__Nano Letters. American Chemical Society, 2018.https://doi.org/10.1021/acs.nanolett.8b00786 .

Michaels, Thomas C. T., Lucie X. Liu, Samo Curk, Peter G. Bolhuis, Anela Sari, and Tuomas P. J. Knowles. “Reaction Rate Theory for Supramolecular Kinetics: Application to Protein Aggregation.”https://doi.org/10.1080/00268976.2018.1474280__Molecular Physics. Taylor &; Francis, 2018.https://doi.org/10.1080/00268976.2018.1474280 .

Michaels, Thomas C.T., Anela Sari, Johnny Habchi, Sean Chia, Georg Meisl, Michele Vendruscolo, Christopher M. Dobson, and Tuomas P.J. Knowles. “Chemical Kinetics for Bridging Molecular Mechanisms and Macroscopic Measurements of Amyloid Fibril Formation.”https://doi.org/10.1146/annurev-physchem-050317-021322__Annual Review of Physical Chemistry. Annual Reviews, 2018.https://doi.org/10.1146/annurev-physchem-050317-021322 .

Vahid Belarghou, Afshin, Anela Sari, and Timon Idema. “Curvature Mediated Interactions in Highly Curved Membranes.”https://doi.org/10.1016/j.bpj.2016.11.2123__Biophysical Journal. Elsevier , 2017.https://doi.org/10.1016/j.bpj.2016.11.2123 .

Helle, Sebastian Carsten Johannes, Qian Feng, Mathias J Aebersold, Luca Hirt, Raphael R Grüter, Afshin Vahid, Andrea Sirianni, et al. “Mechanical Force Induces Mitochondrial Fission.”https://doi.org/10.7554/elife.30292__ELife. eLife Sciences Publications, 2017.https://doi.org/10.7554/elife.30292 .

Simunovic, Mijo, Anela Sari, J. Michael Henderson, Ka Yee C. Lee, and Gregory A. Voth. “Long-Range Organization of Membrane-Curving Proteins.”https://doi.org/10.1021/acscentsci.7b00392__ACS Central Science. American Chemical Society, 2017.https://doi.org/10.1021/acscentsci.7b00392 .

Wirnsberger, Peter, Domagoj Fijan, Roger A. Lightwood, Anela Sari, Christoph Dellago, and Daan Frenkel. “Numerical Evidence for Thermally Induced Monopoles.”https://doi.org/10.1073/pnas.1621494114__Proceedings of the National Academy of Sciences. National Academy of Sciences, 2017.https://doi.org/10.1073/pnas.1621494114 .

Meisl, Georg, Luke Rajah, Samuel A. I. Cohen, Manuela Pfammatter, Anela Sari, Erik Hellstrand, Alexander K. Buell, et al. “Scaling Behaviour and Rate-Determining Steps in Filamentous Self-Assembly.”https://doi.org/10.1039/c7sc01965c__Chemical Science. Royal Society of Chemistry, 2017.https://doi.org/10.1039/c7sc01965c .

Vahid, Afshin, Anela Sari, and Timon Idema. “Curvature Variation Controls Particle Aggregation on Fluid Vesicles.”https://doi.org/10.1039/c7sm00433h__Soft Matter. Royal Society of Chemistry, 2017.https://doi.org/10.1039/c7sm00433h .

Wel, Casper van der, Afshin Vahid, Anela Sari, Timon Idema, Doris Heinrich, and Daniela J. Kraft. “Lipid Membrane-Mediated Attraction between Curvature Inducing Objects.”https://doi.org/10.1038/srep32825__Scientific Reports. Springer Nature, 2016.https://doi.org/10.1038/srep32825 .

Sari, Anela, Thomas C. T. Michaels, Alessio Zaccone, Tuomas P. J. Knowles, and Daan Frenkel. “Kinetics of Spontaneous Filament Nucleation via Oligomers: Insights from Theory and Simulation.”https://doi.org/10.1063/1.4965040__The Journal of Chemical Physics. American Institute of Physics, 2016.https://doi.org/10.1063/1.4965040 .

Wirnsberger, P., D. Fijan, Anela Sari, M. Neumann, C. Dellago, and D. Frenkel. “Non-Equilibrium Simulations of Thermally Induced Electric Fields in Water.”https://doi.org/10.1063/1.4953036__The Journal of Chemical Physics. American Institute of Physics, 2016.https://doi.org/10.1063/1.4953036 .

Bachmann, Stephan Jan, Jurij Kotar, Lucia Parolini, Anela Sari, Pietro Cicuta, Lorenzo Di Michele, and Bortolo Matteo Mognetti. “Melting Transition in Lipid Vesicles Functionalised by Mobile DNA Linkers.”https://doi.org/10.1039/c6sm01515h__Soft Matter. Royal Society of Chemistry, 2016.https://doi.org/10.1039/c6sm01515h .

Sari, Anela, Alexander K. Buell, Georg Meisl, Thomas C. T. Michaels, Christopher M. Dobson, Sara Linse, Tuomas P. J. Knowles, and Daan Frenkel. “Physical Determinants of the Self-Replication of Protein Fibrils.”https://doi.org/10.1038/nphys3828__Nature Physics. Springer Nature, 2016.https://doi.org/10.1038/nphys3828 .

Sari, Anela, Yassmine C. Chebaro, Tuomas P. J. Knowles, and Daan Frenkel. “Crucial Role of Nonspecific Interactions in Amyloid Nucleation.”https://doi.org/10.1073/pnas.1410159111__Proceedings of the National Academy of Sciences. National Academy of Sciences, 2014.https://doi.org/10.1073/pnas.1410159111 .

Mallory, S. A., Anela Sari, C. Valeriani, and A. Cacciuto. “Anomalous Thermomechanical Properties of a Self-Propelled Colloidal Fluid.”https://doi.org/10.1103/physreve.89.052303__Physical Review E. American Physical Society, 2014.https://doi.org/10.1103/physreve.89.052303 .

Mognetti, B. M., Anela Sari, S. Angioletti-Uberti, A. Cacciuto, C. Valeriani, and D. Frenkel. “Living Clusters and Crystals from Low-Density Suspensions of Active Colloids.”https://doi.org/10.1103/physrevlett.111.245702__Physical Review Letters. American Physical Society, 2013.https://doi.org/10.1103/physrevlett.111.245702 .

Sari, Anela, and Angelo Cacciuto. “Self-Assembly of Nanoparticles Adsorbed on Fluid and Elastic Membranes.”https://doi.org/10.1039/c3sm50188d__Soft Matter. Royal Society of Chemistry, 2013.https://doi.org/10.1039/c3sm50188d .

Napoli, Joseph A., Anela Sari, and Angelo Cacciuto. “Collapsing Nanoparticle-Laden Nanotubes.”https://doi.org/10.1039/c3sm51495a__Soft Matter. Royal Society of Chemistry, 2013.https://doi.org/10.1039/c3sm51495a .

Sari, Anela, and Angelo Cacciuto. “Mechanism of Membrane Tube Formation Induced by Adhesive Nanocomponents.”https://doi.org/10.1103/physrevlett.109.188101__Physical Review Letters. American Physical Society, 2012.https://doi.org/10.1103/physrevlett.109.188101 .

Sari, Anela, and Angelo Cacciuto. “Fluid Membranes Can Drive Linear Aggregation of Adsorbed Spherical Nanoparticles.”https://doi.org/10.1103/physrevlett.108.118101__Physical Review Letters. American Physical Society, 2012.https://doi.org/10.1103/physrevlett.108.118101 .

Sari, Anela, and Angelo Cacciuto. “Soft Elastic Surfaces as a Platform for Particle Self-Assembly.”https://doi.org/10.1039/c1sm05773a__Soft Matter. Royal Society of Chemistry, 2011.https://doi.org/10.1039/c1sm05773a .

Sari, Anela, T. Hrenar, M. Malis, and N. Dosli. “Quantum Mechanical Study of Secondary Structure Formation in Protected Dipeptides.”https://doi.org/10.1039/b923041f__Physical Chemistry Chemical Physics. Royal Society of Chemistry , 2010.https://doi.org/10.1039/b923041f .

Sari, Anela, and Angelo Cacciuto. “Particle Self-Assembly on Soft Elastic Shells.”https://doi.org/10.1039/c0sm01143f__Soft Matter. Royal Society of Chemistry (RSC), 2010.https://doi.org/10.1039/c0sm01143f .

Sari, Anela, Behnaz Bozorgui, and Angelo Cacciuto. “Packing of Soft Asymmetric Dumbbells.”https://doi.org/10.1021/jp107545w__The Journal of Physical Chemistry B. American Chemical Society, 2010.https://doi.org/10.1021/jp107545w .

Sari, Anela, Josep C. Pàmies, and Angelo Cacciuto. “Effective Elasticity of a Flexible Filament Bound to a Deformable Cylindrical Surface.”https://doi.org/10.1103/physrevlett.104.226101__Physical Review Letters. American Physical Society, 2010.https://doi.org/10.1103/physrevlett.104.226101 .

Sari, Anela, Valerije Vrdek, and Michael Bühl. “Density Functional Study of Protonated Formylmetallocenes.”https://doi.org/10.1021/om700916f__Organometallics. American Chemical Society, 2008.https://doi.org/10.1021/om700916f .