Data Check RSC Scopus vs. FWF
M. Villányi, (2018).

Nonlinear decoding of a complex movie from the mammalian retina
S. Deny, O. Marre, V. Botella-Soler, G.S. Martius, G. Tkadik, (2018).

Input files and scripts from "Evolution of gene dosage on the Z-chromosome of schistosome parasites" by Picard M.A.L., et al (2018)
B. Vicoso, (2018).

Data and Python scripts supporting Python package FAPS
T. Ellis, (2018).

Time-lapse microscopy data
T. Bergmiller, N. Nikolic, (2018).

Supporting materials "STATISTICAL MECHANICS FOR METABOLIC NETWORKS IN STEADY-STATE GROWTH"
D. De Martino, G. Tkadik, (2018).

Supplementary Files for "Pleiotropy modulates the efficacy of selection in Drosophila melanogaster"
C. Fraisse, (2018).

Data for the paper Evolutionary potential of transcription factors for gene regulatory rewiring
C. Igler, M. Lagator, G. Tkadik, J.P. Bollback, C.C. Guet, (2018).

Data from: Error-robust modes of the retinal population code
J. Prentice, O. Marre, M. Ioffe, A. Loback, G. Tkadik, M. Berry, (2017).

Supplementary materials and methods; Full data set from effects of mutations in phage restriction sites during escape from restriction–modification
M. Pleska, C.C. Guet, (2017).

Mathematical model
N. Nikolic, F. Schreiber, A. Dal Co, D. Kiviet, T. Bergmiller, S. Littmann, M. Kuypers, M. Ackermann, (2017).

Modelling and simulation details
M. Lukacisinova, S. Novak, T. Paixao, (2017).

Extensions of the model
M. Lukacisinova, S. Novak, T. Paixao, (2017).

Supplementary methods
N. Nikolic, F. Schreiber, A. Dal Co, D. Kiviet, T. Bergmiller, S. Littmann, M. Kuypers, M. Ackermann, (2017).

Heuristic prediction for multiple stresses
M. Lukacisinova, S. Novak, T. Paixao, (2017).

Resistance frequencies for different combination strategies
M. Lukacisinova, S. Novak, T. Paixao, (2017).

Supplementary appendix
M.J. Chalk, P. Masset, B. Gutkin, S. Denève, (2017).

Data from: Ret and Et promote directed movements of progenitor cells during renal branching morphogenesis
P. Riccio, C. Cebrián, H. Zong, S. Hippenmeyer, F. Costantini, (2017).

Source data for figures and tables
N. Nikolic, F. Schreiber, A. Dal Co, D. Kiviet, T. Bergmiller, S. Littmann, M. Kuypers, M. Ackermann, (2017).

Data for: Establishment in a new habitat by polygenic adaptation
A. Etheridge, N.H. Barton, (2017).

Data from: X-linkage is not a general inhibitor of tissue-specific gene expression in Drosophila melanogaster
E. Argyridou, A.K. Huylmans, A. Königer, J. Parsch, (2017).

Additional file 1: Table . of Oral immune priming with Bacillus thuringiensis induces a shift in the gene expression of Tribolium castaneum larvae
J. Greenwood, B. Milutinovic, R. Peuß, S. Behrens, D. Essar, P. Rosenstiel, H. Schulenburg, J. Kurtz, (2017).

Additional file 5: Table . of Oral immune priming with Bacillus thuringiensis induces a shift in the gene expression of Tribolium castaneum larvae
J. Greenwood, B. Milutinovic, R. Peuß, S. Behrens, D. Essar, P. Rosenstiel, H. Schulenburg, J. Kurtz, (2017).

Excel file with data on mosquito densities, Wolbachia infection status and housing characteristics
T. Schmidt, N.H. Barton, G. Rasic, A. Turley, B. Montgomery, I. Iturbe Ormaetxe, P. Cook, P. Ryan, S. Ritchie, A. Hoffmann, S. O’Neill, M. Turelli, (2017).

Supporting information concerning observed wMel frequencies and analyses of habitat variables
T. Schmidt, N.H. Barton, G. Rasic, A. Turley, B. Montgomery, I. Iturbe Ormaetxe, P. Cook, P. Ryan, S. Ritchie, A. Hoffmann, S. O’Neill, M. Turelli, (2017).

Supporting Information concerning additional likelihood analyses and results
T. Schmidt, N.H. Barton, G. Rasic, A. Turley, B. Montgomery, I. Iturbe Ormaetxe, P. Cook, P. Ryan, S. Ritchie, A. Hoffmann, S. O’Neill, M. Turelli, (2017).

Raw data from ant queens increase their reproductive efforts after pathogen infection
J. Giehr, A.V. Grasse, S. Cremer, J. Heinze, A. Schrempf, (2017).

Multi-electrode array recording from salamander retinal ganglion cells
O. Marre, G. Tkadik, D. Amodei, E. Schneidman, W. Bialek, M. Berry, (2017).

Graph matching problems for annotating C. Elegans
D. Kainmueller, F. Jug, C. Rother, G. Meyers, (2017).

MATLAB analysis code for 'Sequence-Specific Thermodynamic Properties of Nucleic Acids Influence Both Transcriptional Pausing and Backtracking in Yeast'
M. Lukacisin, (2017).

Fastq files for "Complex chromosomal neighborhood effects determine the adaptive potential of a gene under selection"
M. Steinrück, C.C. Guet, (2017).

Source codes: Brittle fracture simulation with boundary elements for computer graphics
D. Hahn, (2017).

Supplementary Files for "The deep conservation of the Lepidoptera Z chromosome suggests a non canonical origin of the W"
C. Fraisse, (2017).

Forward migration indexes
R. Hauschild, (2017).

Immunological synapse DC-Tcells
A.F. Leithner, (2017).

Biased partitioning of the multi-drug efflux pump AcrAB-TolC underlies long-lived phenotypic heterogeneity
T. Bergmiller, A.M. Andersson, K. Tomasek, E. Balleza, D. Kiviet, R. Hauschild, G. Tkadik, C.C. Guet, (2017).

Data for "The genomic characterization of the t-haplotype, a mouse meiotic driver, highlights its complex history and specialized biology"
B. Vicoso, (2017).

Strong amplifiers of natural selection
A. Pavlogiannis, J. Tkadlec, K. Chatterjee, M. Nowak , (2017).

Code for "The genomic characterization of the t-haplotype, a mouse meiotic driver, highlights its complex history and specialized biology"
B. Vicoso, (2017).

Light Sheet Fluorescence microscopy of plant roots growing on the surface of a gel
D. von Wangenheim, R. Hauschild, J. Friml, (2017).

Live tracking of moving samples in confocal microscopy for vertically grown roots
R. Hauschild, (2017).

Data from: A sting in the spit: widespread cross-infection of multiple RNA viruses across wild and managed bees
D. Mcmahon, M. Fürst, J. Caspar, P. Theodorou, M. Brown, R. Paxton, (2016).

Experimental game instructions
C. Hilbe, K. Hagel, M. Milinski, (2016).

Simulation study to test the robustness of ABC in face of recent times of divergence
C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, N. Bierne, (2016).

Accessions of surveyed individuals, geographic locations and summary statistics
C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, N. Bierne, (2016).

ZIP-archived directory containing all data and computer programs
M.P. Zagórski, Z. Burda, B. Wacaw, (2016).

Data from: Elevated virulence of an emerging viral genotype as a driver of honeybee loss
D. Mcmahon, M. Natsopoulou, V. Doublet, M. Fürst, S. Weging, M. Brown, A. Gogol Döring, R. Paxton, (2016).

Computation of positional information in an Ising model
P. Hillenbrand, U. Gerland, G. Tkadik, (2016).

Quantification of the growth rate reduction as a consequence of age-specific mortality
A. Boehm, M. Arnoldini, T. Bergmiller, T. Röösli, C. Bigosch, M. Ackermann, (2016).

Error bound on an estimator of position
P. Hillenbrand, U. Gerland, G. Tkadik, (2016).

Computation of positional information in a discrete morphogen field
P. Hillenbrand, U. Gerland, G. Tkadik, (2016).

Experimental data
C. Hilbe, K. Hagel, M. Milinski, (2016).

Data from: How does epistasis influence the response to selection?
N.H. Barton, (2016).

Data from evolutionary interplay between structure, energy and epistasis in the coat protein of the =54 phage family
R.A. Fernandes Redondo, H. de Vladar, T. Wodarski, J.P. Bollback, (2016).

Flower colour data and phylogeny (NEXUS) files
T. Ellis, D. Field, (2016).

Fiji script to determine average speed and direction of migration of cells
R. Hauschild, (2016).

Synthetic discrete tomography problems
P. Swoboda, (2016).

Inference of mating patterns among wild snapdragons in a natural hybrid zone in 2012
D. Field, T. Ellis, (2016).

Data on pollinator observations and offpsring phenotypes
T. Ellis, (2016).

Pollinator visitation data for wild Antirrhinum majus plants, with phenotypic and frequency data.
T. Ellis, (2016).

Experimental Data for Binding Site Evolution of Bacterial RNA Polymerase
M. Tugrul, (2016).

Tracking, Correcting and Absorbing Water Surface Waves
M. Bojsen-Hansen, (2016).

MATLAB analysis code for 'Sequence-Specific Thermodynamic Properties of Nucleic Acids Influence Both Transcriptional Pausing and Backtracking in Yeast'
M. Lukacisin, M. Landon, R. Jajoo, (2016).

Excel file containing the raw data for all figures
G. Chevereau, M. Lukacisinova, T. Batur, A. Guvenek, D.H. Ayhan, E. Toprak, M.T. Bollenbach, (2015).

Data from: Opposing effects of allogrooming on disease transmission in ant societies
F. Theis, L.V. Ugelvig, C. Marr, S. Cremer, (2015).

Supporting information text
T. Friedlander, A.E. Mayo, T. Tlusty, U. Alon, (2015).

Root traits computed by DynamicRoots for the maize root shown in fig 2
O. Symonova, C. Topp, H. Edelsbrunner, (2015).

Description of the agent based simulations
B. Trubenova, S. Novak, R. Hager, (2015).

Evolutionary simulation code
T. Friedlander, A.E. Mayo, T. Tlusty, U. Alon, (2015).

Other fitness models for comparison & for interacting TFBSs
M. Tugrul, T. Paixao, N.H. Barton, G. Tkadik, (2015).

An exploration of the universe of polyglutamine structures - submission to PLOS journals
À. Gómez Sicilia, M.K. Sikora, M. Cieplak, M. Carrión Vázquez, (2015).

Mathematical inference of the results
B. Trubenova, S. Novak, R. Hager, (2015).

Data from: Increased grooming after repeated brood care provides sanitary benefits in a clonal ant
C. Westhus, L.V. Ugelvig, E. Tourdot, J. Heinze, C. Doums, S. Cremer, (2015).

Gene ontology enrichment analysis for the most sensitive gene deletion strains for all drugs
G. Chevereau, M. Lukacisinova, T. Batur, A. Guvenek, D.H. Ayhan, E. Toprak, M.T. Bollenbach, (2015).

Data from: Adaptation to parasites and costs of parasite resistance in mutator and non-mutator bacteria
S. Wielgoss, T. Bergmiller, A.M. Bischofberger, A.R. Hall, (2015).

Experimental part of CAV 2015 publication: Counterexample Explanation by Learning Small Strategies in Markov Decision Processes
A. Fellner, (2015).

gIPFrm: Generalized iterative proportional fitting for relational models
A. Klimova, T. Rudas, (2014).

Data from: Role of sex and migration in adaptation to sink environments
M. Lagator, A. Morgan, P. Neve, N. Colegrave, (2014).

Supporting information
S. Wolf, D. Mcmahon, K. Lim, C. Pull, S. Clark, R. Paxton, J. Osborne, (2014).

Transition probability between TF expression states when Db inhibits Nk.2
A. Lovrics, Y. Gao, B. Juhász, I. Bock, H.M. Byrne, A. Dinnyés, K. Kovács, (2014).

Data from: Anti-pathogen protection versus survival costs mediated by an ectosymbiont in an ant host
M. Konrad, A.V. Grasse, S. Tragust, S. Cremer, (2014).

Data from: Selection history and epistatic interactions impact dynamics of adaptation to novel environmental stresses
M. Lagator, N. Colegrave, P. Neve, (2014).

Detailed proofs for cThe time scale of evolutionary innovationd
K. Chatterjee, A. Pavlogiannis, B. Adlam, M. Novak, (2014).

Data from: Pupal cocoons affect sanitary brood care and limit fungal infections in ant colonies
S. Tragust, L.V. Ugelvig, M. Chapuisat, J. Heinze, S. Cremer, (2014).

Data from: Transformation of stimulus correlations by the retina
K. Simmons, J. Prentice, G. Tkadik, J. Homann, H. Yee, S. Palmer, P. Nelson, V. Balasubramanian, (2014).

Data from: Increased gene dosage plays a predominant role in the initial stages of evolution of duplicate TEM-1 beta lactamase genes
R. Dhar, T. Bergmiller, A. Wagner, (2014).

Forgiver triumphs in alternating prisoner's dilemma 
B. Zagorsky, J. Reiter, K. Chatterjee, M. Nowak, (2013).

Data from: Likelihood-based inference of population history from low coverage de novo genome assemblies
J. Hearn, G. Stone, N.H. Barton, K. Lohse, L. Bunnefeld, (2013).

Data from: Altruism can evolve when relatedness is low: evidence from bacteria committing suicide upon phage infection
D. Refardt, T. Bergmiller, R. Kümmerli, (2013).

Data from: Social transfer of pathogenic fungus promotes active immunisation in ant colonies
M. Konrad, M. Vyleta, F. Theis, M. Stock, M. Klatt, V. Drescher, C. Marr, L.V. Ugelvig, S. Cremer, (2012).

Data from: Approximate Bayesian computation for modular inference problems with many parameters: the example of migration rates
S. Aeschbacher, A. Futschik, M. Beaumont, (2012).

Data from: Ants disinfect fungus-exposed brood by oral uptake and spread of their poison
S. Tragust, B. Mitteregger, V. Barone, M. Konrad, L.V. Ugelvig, S. Cremer, (2012).

Data from: A likelihood-based comparison of population histories in a parasitoid guild
K. Lohse, N.H. Barton, G. Stone, G. Melika, (2012).

Data from: Effect of oceanographic barriers and overfishing on the population genetic structure of the European spiny lobster (Palinurus elephas)
F. Palero, P. Abello, E. Macpherson, M. Beaumont, M. Pascual, (2011).

Heterosis and the drift load
U. Rosas, N.H. Barton, L. Copsey, P. Barbier De Reuille, E. Coen, (2010).