Transforming spanning trees: A lower bound
K. Buchin, A. Razen, T. Uno, U. Wagner, Computational Geometry: Theory and Applications 42 (2009) 724–730.

Hardness of embedding simplicial complexes in dd
J. Matousek, M. Tancer, U. Wagner, in:, SIAM, 2009, pp. 855–864.

 Subcellular compartment-specific molecular diversity of pre- and post-synaptic GABAB-activated GIRK channels in Purkinje cells
L. Fernández Alacid, C. Aguado, F. Ciruela, R. Martín, J. Colón, M. Cabañero, M. Gassmann, M. Watanabe, R. Shigemoto, K. Wickman, B. Bettler, J. Sánchez Prieto, R. Luján, Journal of Neurochemistry 110 (2009) 1363–1376.

Input-specific intrasynaptic arrangements of ionotropic glutamate receptors and their impact on postsynaptic responses
E. Tarusawa, K. Matsui, T. Budisantoso, E. Molnár, M. Watanabe, M. Matsui, Y. Fukazawa, R. Shigemoto, Journal of Neuroscience 29 (2009) 12896–12908.

Crosstalk between GABAB and mGlu1a receptors reveals new insight into GPCR signal integration
M. Rives, C. Vol, Y. Fukazawa, N. Tinel, E. Trinquet, M. Ayoub, R. Shigemoto, J. Pin, L. Prezèau, EMBO Journal 28 (2009) 2195–2208.

Tuning of the Zernike phase-plate for visualization of detailed ultrastructure in complex biological specimens
Y. Fukuda, Y. Fukazawa, R. Danev, R. Shigemoto, K. Nagayama, Journal of Structural Biology 168 (2009) 476–484.

Fluorescent Arc/Ar.1 indicator mice: A versatile tool to study brain activity changes in vitro and in vivo
V. Grinevich, A. Kolleker, M. Eliava, N. Takada, H. Takuma, Y. Fukazawa, R. Shigemoto, D. Kuhl, J. Waters, P. Seeburg, P. Osten, Journal of Neuroscience Methods 184 (2009) 25–36.

Large-conductance calcium-activated potassium channels in Purkinje cell plasma membranes are clustered at sites of hypolemmal microdomains
W. Kaufmann, F. Ferraguti, Y. Fukazawa, Y. Kasugai, R. Shigemoto, P. Laake, J. Sexton, P. Ruth, G. Wietzorrek, H. Knaus, J. Storm, O. Ottersen, Journal of Comparative Neurology 515 (2009) 215–230.

The GABA a isoform mediates heterosynaptic depression at hippocampal mossy fiber synapses
N. Guetg, R. Seddik, R. Vigot, R. Turedek, M. Gassmann, K. Vogt, H. Bräuner Osborne, R. Shigemoto, O. Kretz, M. Frotscher, Á. Kulik, B. Bettler, Journal of Neuroscience 29 (2009) 1414–1423.

Selective gating of glutamatergic inputs to excitatory neurons of amygdala by presynaptic GABAb receptor
B. Pan, Y. Dong, W. Ito, Y. Yanagawa, R. Shigemoto, A. Morozov, Neuron 61 (2009) 917–929.

Bioimaging with two-photon-induced luminescence from triangular nanoplates and nanoparticle aggregates of gold
Y. Jiang, N. Horimoto, K. Imura, K. Matsui, R. Shigemoto, Advanced Materials 21 (2009) 2309–2313.

Mice with altered myelin proteolipid protein gene expression display cognitive deficits accompanied by abnormal neuron-glia interactions and decreased conduction velocities
H. Tanaka, J. Ma, K. Tanaka, K. Takao, M. Komada, K. Tanda, A. Suzuki, T. Ishibashi, H. Baba, T. Isa, R. Shigemoto, K. Ono, T. Miyakawa, K. Ikenaka, Journal of Neuroscience 29 (2009) 8363–8371.

Visual properties of transgenic rats harboring the channelrhodopsin-2 gene regulated by the thy-1.2 promoter
H. Tomita, E. Sugano, Y. Fukazawa, H. Isago, Y. Sugiyama, T. Hiroi, T. Ishizuka, H. Mushiake, M. Kato, M. Hirabayashi, R. Shigemoto, H. Yawo, M. Tamai, PLoS One 4 (2009).

Semicircle law on short scales and delocalization of eigenvectors for Wigner random matrices
L. Erdös, B. Schlein, H. Yau, Annals of Probability 37 (2009) 815–852.

Dynamical formation of correlations in a Bose-Einstein condensate
L. Erdös, A. Michelangeli, B. Schlein, Communications in Mathematical Physics 289 (2009) 1171–1210.

Local semicircle law and complete delocalization for Wigner random matrices
L. Erdös, B. Schlein, H. Yau, Communications in Mathematical Physics 287 (2009) 641–655.

Quantum dynamics with mean field interactions: A new approach
L. Erdös, B. Schlein, Journal of Statistical Physics 134 (2009) 859–870.

Rigorous derivation of the gross-pitaevskii equation with a large interaction potential
L. Erdös, B. Schlein, H. Yau, Journal of the American Mathematical Society 22 (2009) 1099–1156.

Quantitative measurement of the life time of turbulence in pipe flow
D. Kuik, C. Poelma, B. Hof, J. Westerweel, in:, Springer, 2009, pp. 145–148.

An experimental study of the decay of turbulent puffs in pipe flow
A. De Lózar, B. Hof, Philosophical Transactions of the Royal Society A Mathematical Physical and Engineering Sciences 367 (2009) 589–599.

Hormone interactions at the root apical meristem
E. Benková, J. Hejátko, Plant Molecular Biology 69 (2009) 383–396.

Arabidopsis lateral root development: an emerging story
B. Péret, B. De Rybel, I. Casimiro, E. Benková, R. Swarup, L. Laplaze, T. Beeckman, M. Bennett, Trends in Plant Science 14 (2009) 399–408.

Blossom V: A new implementation of a minimum cost perfect matching algorithm
V. Kolmogorov, Mathematical Programming Computation 1 (2009) 43–67.

Parasitic nematodes modulate PIN mediated auxin transport to facilitate infection
W. Grunewald, B. Cannoot, J. Friml, G. Gheysen, PLoS Pathogens 5 (2009).

The PIN-FORMED (PIN) protein family of auxin transporters
P. Kedek, P. Skfpa, J. Libus, S. Naramoto, R. Tejos, J. Friml, E. Zaeímalová, Genome Biology 10 (2009).

Subcellular homeostasis of phytohormone auxin is mediated by the ER localized PIN5 transporter
J. Mravec, P. Skfpa, A. Bailly, K. Hoyerová, P. Kedek, A. Bielach, J. Petrásek, J. Zhang, V. Gaykova, Y. Stierhof, P. Dobrev, K. Schwarzerová, J. Roldík, D. Seifertová, C. Luschnig, E. Benková, E. Zaeímalová, M. Geisler, J. Friml, Nature 459 (2009) 1136–1140.

Phosphoinositide-dependent regulation of VAN3 ARF-GAP localization and activity essential for vascular tissue continuity in plants
S. Naramoto, S. Sawa, K. Koizumi, T. Uemura, T. Ueda, J. Friml, A. Nakano, H. Fukuda, Development 136 (2009) 1529–1538.

PIN auxin efflux carrier polarity is regulated by PINOID kinase mediated recruitment into GNOM independent trafficking in arabidopsis
J. Kleine Vehn, F. Huang, S. Naramoto, J. Zhang, M. Michniewicz, R. Offringa, J. Friml, Plant Cell 21 (2009) 3839–3849.

A regulated auxin minimum is required for seed dispersal in Arabidopsis
K. Sorefan, T. Girin, S. Liljegren, K. Ljung, P. Robles, C. Galván Ampudia, R. Offringa, J. Friml, M. Yanofsky, L. Østergaard, Nature 459 (2009) 583–586.

Auxin transport routes in plant development
J. Petrásek, J. Friml, Development 136 (2009) 2675–2688.

Cell biology
K. Schumacher, J. Friml, Current Opinion in Plant Biology 12 (2009) 651–652.

A global perspective on MAP inference for low level vision
O. Woodford, C. Rother, V. Kolmogorov, in:, IEEE, 2009, pp. 2319–2326.

A new randomness extraction paradigm for hybrid encryption
E. Kiltz, K.Z. Pietrzak, M. Stam, M. Yung, in:, Springer, 2009, pp. 590–609.

On the security of padding based encryption schemes Why We cannot prove OAEP secure in the standard model
E. Kiltz, K.Z. Pietrzak, in:, Springer, 2009, pp. 389–406.

A leakage resilient mode of operation
K.Z. Pietrzak, in:, Springer, 2009, pp. 462–482.

The rate at which asexual populations cross fitness valleys
D. Weissman, M. Desai, D. Fisher, M. Feldman, Theoretical Population Biology 75 (2009) 286–300.

Reaction regimes on the synthesis of hollow particles by the Kirkendall effect
A. Cabot, M. Ibáñez, P. Guardia, P. Alivisatos, Journal of the American Chemical Society 131 (2009) 11326–11328.

Periodic forces trigger a complex mechanical response in ubiquitin
P. Szymczak, H.L. Janovjak, Journal of Molecular Biology 390 (2009) 443–456.

Hydroxyurea triggers cellular responses that actively cause bacterial cell death
M.T. Bollenbach, R. Kishony, Molecular Cell 36 (2009) 728–729.

Probabilistic systems with limsup and liminf objectives
K. Chatterjee, T.A. Henzinger, in:, Springer, 2009, pp. 32–45.

Semi-supervised analysis of human fMRI data
M. Blaschko, C. Lampert, A. Bartels, Semi-Supervised Analysis of Human FMRI Data, Berlin Institute of Technology, 2009.

Object localization with global and local context kernels
M. Blaschko, C. Lampert, in:, BMVA Press, 2009, pp. 1–11.

Learning to detect unseen object classes by between-class attribute transfer
C. Lampert, H. Nickisch, S. Harmeling, in:, IEEE, 2009, pp. 951–958.

Active structured learning for high-speed object detection
C. Lampert, J. Peters, in:, Springer, 2009, pp. 221–231.

A high-speed object tracker from off-the-shelf components
C. Lampert, J. Peters, A High-Speed Object Tracker from off-the-Shelf Components, IEEE, 2009.

Optimizing information flow in small genetic networks
G. Tkadik, A. Walczak, W. Bialek, Physical Review E Statistical Nonlinear and Soft Matter Physics 80 (2009).

The dynamics of adaptation on correlated fitness landscapes
S. Kryazhimskiy, G. Tkadik, J. Plotkin, PNAS 106 (2009) 18638–18643.

Spin glass models for a network of real neurons
G. Tkadik, E. Schneidman, M. Berry, W. Bialek, ArXiv q-NC (2009).

Cell Biology: Networks, regulation, pathways
G. Tkadik, W. Bialek, in:, R. Meyers (Ed.), Encyclopedia of Complexity and Systems Science, Springer, 2009, pp. 719–741.

Deforming meshes that split and merge
C. Wojtan, N. Thürey, M. Gross, G. Turk, ACM Transactions on Graphics 28 (2009).

Comment on 'A congruence index for testing topological similarity between trees'.
A. Kupczok, A. Von Haeseler, Bioinformatics 25 (2009) 147–149.

The effect of chirality phenotype and genotype on the fecundity and viability of Partula suturalis and Lymnaea stagnalis: Implications for the evolution of sinistral snails
A. Davison, N.H. Barton, B. Clarke, Journal of Evolutionary Biology 22 (2009) 1624–1635.

Functional proteomics identify cornichon proteins as auxiliary subunits of AMPA receptors
J. Schwenk, N. Harmel, G. Zolles, W. Bildl, Á. Kulik, B. Heimrich, O. Chisaka, P.M. Jonas, U. Schulte, B. Fakler, N. Klocker, Science 323 (2009) 1313–9.

Fast adaptive uniformization of the chemical master equation
F. Didier, T.A. Henzinger, M. Mateescu, V. Wolf, in:, IEEE, 2009, pp. 118–127.

Formalisms for specifying Markovian population models
T.A. Henzinger, B. Jobstmann, V. Wolf, in:, Springer, 2009, pp. 3–23.

Distributed, modular HTL
T.A. Henzinger, C. Kirsch, E. Marques, A. Sokolova, in:, IEEE, 2009, pp. 171–180.

Probabilistic weighted automata
K. Chatterjee, L. Doyen, T.A. Henzinger, in:, Springer, 2009, pp. 244–258.

Finitary winning in omega-regular games
K. Chatterjee, T.A. Henzinger, F. Horn, ACM Transactions on Computational Logic (TOCL) 11 (2009).

Qualitative logics and equivalences for probabilistic systems
K. Chatterjee, L. De Alfaro, M. Faella, A. Legay, Logical Methods in Computer Science 5 (2009).

Analogies in the evolution of individual and social immunity
S. Cremer, M.K. Sixt, Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences 364 (2009) 129–142.

Cd-dependent leading edge coordination is essential for interstitial dendritic cell migration (Plenary Paper)
T. Lämmermann, J. Renkawitz, X. Wu, K. Hirsch, C. Brakebusch, M.K. Sixt, Blood 113 (2009) 5703–5710.

;21 integrins differentially control extravasation of inflammatory cell subsets into the CNS during autoimmunity
M. Bauer, C. Brakebusch, C. Coisne, M.K. Sixt, H. Wekerle, B. Engelhardt, R. Fässler, PNAS 106 (2009) 1920–1925.

Cytohesin-1 controls the activation of RhoA and modulates integrin-dependent adhesion and migration of dendritic cells
T. Quast, B. Tappertzhofen, C. Schild, J. Grell, N. Czeloth, R. Förster, R. Alon, L. Fraemohs, K. Dreck, C. Weber, T. Lämmermann, M.K. Sixt, W. Kolanus, Blood 113 (2009) 5801–5810.

Species' range: Adaptation in space and time
J. Polechova, N.H. Barton, G. Marion, American Naturalist 174 (2009) 6–4.

The role of the extracellular matrix in Kupffer's vesicle formation in zebrafish
G. Soete, C.-P.J. Heisenberg, Mechanisms of Development 126 (2009) 8–8.

Quantitative approaches in developmental biology
A. Oates, N. Gorfinkiel, M. Gonzalez Gaitan, C.-P.J. Heisenberg, Nature Reviews Genetics 10 (2009) 517–530.

Regulation of planar cell polarity signalling by the prenylation pathway
M. Kai, N. Buchan, C.-P.J. Heisenberg, M. Tada, Mechanisms of Development 126 (2009) 2–2.

Discovery of a Small Molecule that Blocks Wall Teichoic Acid Biosynthesis in Staphylococcus aureus
J. Swoboda, T. Meredith, J. Campbell, S. Brown, T. Suzuki, M.T. Bollenbach, A. Malhowski, R. Kishony, M. Gilmore, S. Walker, ACS Chemical Biology 4 (2009) 875–883.

Nonoptimal Microbial Response to Antibiotics Underlies Suppressive Drug Interactions
T. Bollenbach, S. Quan, R.P. Chait, R. Kishony, Cell 139 (2009) 707–718.

The evolution of strong reproductive isolation
N.H. Barton, M. De Cara, Evolution; International Journal of Organic Evolution 63 (2009) 1171–1190.

Abstraction Refinement for Quantified Array Assertions
M. Seghir, A. Podelski, T. Wies, in:, Springer, 2009, pp. 3–18.

ABC PG stabilises PIN1 in membrane microdomains in Arabidopsis
B. Titapiwatanakun, J. Blakeslee, A. Bandyopadhyay, H. Yang, J. Mravec, M. Sauer, Y. Cheng, J. Adamec, A. Nagashima, M. Geisler, T. Sakai, J. Friml, W. Peer, A. Murphy, Plant Journal 57 (2009) 27–44.

Cytokinins modulate auxin induced organogenesis in plants via regulation of the auxin efflux
M. Pernisová, P. Klíma, J. Horák, M. Válková, J. Malbeck, P. Soudek, P. Reichman, K. Hoyerová, J. Dubová, J. Friml, E. Zaeímalová, J. Hejátko, PNAS 106 (2009) 3609–3614.

Cytokinin regulates root meristem activity via modulation of the polar auxin transport
K. Rfeidka, M. Simásková, J. Duclercq, J. Petrásek, E. Zaeímalová, S. Simon, J. Friml, M. Van Montagu, E. Benková, PNAS 106 (2009) 4284–4289.

Fluorescence imaging based screen identifies ARF GEF component of early endosomal trafficking
H. Tanaka, S. Kitakura, R. De Rycke, R. De Groodt, J. Friml, Current Biology 19 (2009) 391–397.

Auxin and other signals on the move in plants
H. Robert, J. Friml, Nature Chemical Biology 5 (2009) 325–332.

Auxin: A trigger for change in plant development
S. Vanneste, J. Friml, Cell 136 (2009) 1005–1016.

SnapShot: Auxin signaling and transport
D. Weijers, J. Friml, Cell 136 (2009) 1172–1172.

A morphogenetic trigger: Is there an emerging concept in plant developmental biology?
E. Benková, M. Ivanchenko, J. Friml, S. Shishkova, J. Dubrovsky, Trends in Plant Science 14 (2009) 189–193.

An analysis of convex relaxations for MAP estimation of discrete MRFs
M.P. Kumar, V. Kolmogorov, P. Torr, Journal of Machine Learning Research 10 (2009) 71–106.

Joint optimization of segmentation and appearance models
S. Vicente, V. Kolmogorov, C. Rother, in:, IEEE, 2009, pp. 755–762.

New algorithms for convex cost tension problem with application to computer vision
V. Kolmogorov, A. Shioura, Discrete Optimization 6 (2009) 378–393.

A single UDP galactofuranose transporter is required for galactofuranosylation in Aspergillus fumigatus
J. Engel, P.S. Schmalhorst, T. Dörk Bousset, V. Ferrières, F. Routier, Journal of Biological Chemistry 284 (2009) 33859–33868.

Sensory correlates of imaginal conditioning in Drosophila melanogaster
S. Chakraborty Tuhin, S. Goswami, O. Siddiqi, Journal of Neurogenetics 23 (2009) 210–9.

Mastitis in dairy production: Estimation of sensitivity, specificity and disease prevalence in the absence of a gold standard
C. Uhler, Journal of Agricultural Biological and Environmental Statistics 14 (2009) 79–98.

Biosynthesis of Galactofuranose Containing Glycans and Their Relevance for the Pathogenic Fungus Aspergillus fumigatus
P.S. Schmalhorst, Biosynthesis of Galactofuranose Containing Glycans and Their Relevance for the Pathogenic Fungus Aspergillus Fumigatus, Gottfried Wilhelm Leibniz Universität Hannover, 2009.

Quiet gene circuit more fragile than its noisy peer
M.T. Bollenbach, R. Kishony, Cell 139 (2009) 460–461.

Activity-dependent control of neuronal output by local and global dendritic spike attenuation
S. Remy, J.L. Csicsvari, H. Beck, Neuron 61 (2009) 906–916.

Stability and computation of medial axes: a state-of-the-art report
D. Attali, J. Boissonnat, H. Edelsbrunner, in:, Mathematical Foundations of Scientific Visualization, Computer Graphics, and Massive Data Exploration, Springer, 2009, pp. 109–125.

Why sex and recombination? 
N.H. Barton, in:, Cold Spring Harbor Symposia on Quantitative Biology, Cold Spring Harbor Laboratory Press, 2009, pp. 187–195.

Structured prediction by joint kernel support estimation
C. Lampert, M. Blaschko, Machine Learning 77 (2009) 249–269.

Combining appearance and motion for human action classification in videos
P. Dhillon, S. Nowozin, C. Lampert, in:, IEEE, 2009, pp. 22–29.

Efficient subwindow search: A branch and bound framework for object localization
C. Lampert, M. Blaschko, T. Hofmann, IEEE Transactions on Pattern Analysis and Machine Intelligence 31 (2009) 2129–2142.

Combining appearance and motion for human action classification in videos
P. Dhillon, S. Nowozin, C. Lampert, in:, IEEE, 2009, pp. 22–29.

Kernel Methods in Computer Vision
C. Lampert, Kernel Methods in Computer Vision, now publishers, 2009.

Global connectivity potentials for random field models
S. Nowozin, C. Lampert, in:, IEEE, 2009, pp. 818–825.

Detecting objects in large image collections and videos by efficient subimage retrieval
C. Lampert, in:, IEEE, 2009, pp. 987–994.

Diffusion, dimensionality, and noise in transcriptional regulation
G. Tkadik, W. Bialek, Physical Review E Statistical Nonlinear and Soft Matter Physics 79 (2009).

On the application of statistical physics to evolutionary biology
N.H. Barton, J. Coe, Journal of Theoretical Biology 259 (2009) 317–324.

On relational interfaces
S. Tripakis, B. Lickly, T.A. Henzinger, E. Lee, in:, EMSOFT ’09 Proceedings of the Seventh ACM International Conference on Embedded Software, ACM, 2009, pp. 67–76.