Modeling the counts of faint radioloud quasars: Constraints on the supermassive black hole population and predictions for high redshift
Z. Haiman, E. Quataert, G.C. Bower, The Astrophysical Journal 612 (2004) 698–705.

Probing the reionization history using the spectra of highredshift sources
A. Mesinger, Z. Haiman, R. Cen, The Astrophysical Journal 613 (2004) 23–35.

DUO: The dark universe observatory
R. Griffiths, R. Petre, G. Hasinger, P. Predehl, N.E. White, B. Aschenbach, X. Barcons, H. Bohringer, U.G. Briel, L. Cominsky, M.F. Corcoran, U. Dinger, W.J. Egle, P. Friedrich, Z. Haiman, R. Hartmann, J.P. Henry, H. Hippmann, J. Ingersoll, K. Jahoda, D.T. Jenstrom, S. Jordan, E. Kendziorra, G. Kettenring, W. Kink, N. Meidinger, T. Miyaji, J. Mohr, S. Mueller, R.F. Mushotzky, E. Pfeffermann, P. Schuecker, A. Schwope, M. Shannon, L. Strueder, S.J. Varlese, in:, G. Hasinger, M.J.L. Turner (Eds.), SPIE Astronomical Telescopes + Instrumentation, SPIE, 2004.

Rate Coefficient for H+ + (:3g+, ;d = 0, J = 0)  H(1s) + + Charge Transfer and Some Cosmological Implications
D.W. Savin, P.S. Krsti, Z. Haiman, P.C. Stancil, The Astrophysical Journal 606 (2004) L167–L170.

Constraints from gravitational recoil on the growth of supermassive black holes at high redshift
Z. Haiman, The Astrophysical Journal 613 (2004) 36–40.

Constraining the evolution of dark energy with a combination of galaxy cluster observables
S. Wang, J. Khoury, Z. Haiman, M. May, Physical Review D 70 (2004).

Reasoning from fossils: Learning from the local black hole population about the evolution of quasars
Z. Haiman, L. Ciotti, J.P. Ostriker, The Astrophysical Journal 606 (2004) 763–773.

A snapshot survey for gravitational lenses among z  4.0 quasars. I. The z >5.7 sample
G.T. Richards, M.A. Strauss, B. Pindor, Z. Haiman, X. Fan, D. Eisenstein, D.P. Schneider, N.A. Bahcall, J. Brinkmann, R. Brunner, The Astronomical Journal 127 (2004) 1305–1312.

Caught in the act?
Z. Haiman, Nature 430 (2004) 979–980.

A limit from the Xray background on the contribution of quasars to reionization
M. Dijkstra, Z. Haiman, A. Loeb, The Astrophysical Journal 613 (2004) 646–654.

Stress-dependent regulation of FOXO transcription factors by the SIR deacetylase
A. Brunet, L.B. Sweeney, J.F. Sturgill, K. Chua, P. Greer, Y. Lin, H. Tran, S. Ross, R. Mostoslavsky, H. Cohen, L. Hu, H.-L. Chen, M. Jedrychowski, S. Gygi, D. Sinclair, F. Alt, M. Greenberg, Science 303 (2004) 2011–2015.

A limit shape theorem for periodic stochastic dispersion
D. Dolgopyat, V. Kaloshin, L. Koralov, Communications on Pure and Applied Mathematics 57 (2004) 1127–1158.

Sample path properties of the stochastic flows
L. Koralov, V. Kaloshin, D. Dolgopyat, The Annals of Probability 32 (2004) 1–27.

Prediction of functional sites by analysis of sequence and structure conservation
A. Panchenko, F. Kondrashov, S. Bryant, Protein Science 13 (2004) 884–892.

Bioinformatical assay of human gene morbidity
F. Kondrashov, A. Ogurtsov, A. Kondrashov, Nucleic Acids Research 32 (2004) 1731–1737.

A common framework for understanding the origin of genetic dominance and evolutionary fates of gene duplications
F. Kondrashov, E. Koonin, Trends in Genetics 20 (2004) 287–291.

Mechanisms and convergence of compensatory evolution in mammalian mitochondrial tRNAs
A. Kern, F. Kondrashov, Nature Genetics 36 (2004) 1207–1212.

Positive selection at sites of multiple amino acid replacements since rat-mouse divergence
G. Bazykin, F. Kondrashov, A. Ogurtsov, S. Sunyaev, A. Kondrashov, Nature 429 (2004) 558–562.

The functional genomic distribution of protein divergence in two animal phyla: Coevolution, genomic conflict, and constraint
C. Castillo Davis, F. Kondrashov, D. Hartl, R. Kulathinal, Genome Research 14 (2004) 802–811.

RNA silencing genes control de novo DNA methylation
S.W.-L. Chan, D. Zilberman,  Zhixin Xie,  Lisa K. Johansen, J.C. Carrington, S.E. Jacobsen, Science 303 (2004) 1336.