Selection in favor of nucleotides G and C diversifies evolution rates and levels of polymorphism at mammalian synonymous sites
F. Kondrashov, A. Ogurtsov, A. Kondrashov, Journal of Theoretical Biology 240 (2006) 616–626.

Signs of positive selection of somatic mutations in human cancers detected by EST sequence analysis
V. Babenko, M. Basu, F. Kondrashov, I. Rogozin, E. Koonin, BMC Cancer 6 (2006).

Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription
D. Zilberman, M. Gehring, R.K. Tran, T. Ballinger, S. Henikoff, Nature Genetics 39 (2006) 61–69.

Principles and implementations of dissipative (dynamic) self-assembly
M. Fialkowski, K.J.M. Bishop, R. Klajn, S.K. Smoukov, C.J. Campbell, B.A. Grzybowski, The Journal of Physical Chemistry B 110 (2006) 2482–2496.

Ionic-like behavior of oppositely charged nanoparticles
A.M. Kalsin, B. Kowalczyk, S.K. Smoukov, R. Klajn, B.A. Grzybowski, Journal of the American Chemical Society 128 (2006) 15046–15047.

The core and most useful molecules in organic chemistry
K.J.M. Bishop, R. Klajn, B.A. Grzybowski, Angewandte Chemie International Edition 45 (2006) 5348–5354.

Pushing the envelope: Structure, function, and dynamics of the nuclear periphery
M. Hetzer, T.C. Walther, I.W. Mattaj, Annual Review of Cell and Developmental Biology 21 (2005) 347–380.

Hyperlink analysis on the world wide web
M.H. Henzinger, in:, Proceedings of the 16th ACM Conference on Hypertext and Hypermedia, Association for Computing Machinery, 2005, pp. 1–3.

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M.H. Henzinger, B.-W. Chang, B. Milch, S. Brin, World Wide Web 8 (2005) 101–126.

An online throughput-competitive algorithm for multicast routing and admission control
A. Goel, M.H. Henzinger, S. Plotkin, Journal of Algorithms 55 (2005) 1–20.

An enhanced temperature-index glacier melt model including the shortwave radiation balance: Development and testing for Haut Glacier d’Arolla, Switzerland
F. Pellicciotti, B. Brock, U. Strasser, P. Burlando, M. Funk, J. Corripio, Journal of Glaciology 51 (2005) 573–587.

In vivo performance of genetically encoded indicators of neural activity in flies
D. Reiff, A. Ihring, G. Guerrero, E. Isacoff, M.A. Jösch, J. Nakai, A. Borst, Journal of Neuroscience 25 (2005) 4766–4778.

Quaternionic geometry of matroids
T. Hausel, Open Mathematics 3 (2005) 26–38.

Mirror symmetry and Langlands duality in the non-Abelian Hodge theory of a curve
T. Hausel, in:, Geometric Methods in Algebra and Number Theory, Springer, 2005, pp. 193–217.

Abelianization for hyperkähler quotients
T. Hausel, N. Proudfoot, Topology 44 (2005) 231–248.

Kinetic origin of island intermixing during the growth of Ge on Si (001)
G. Katsaros, G. Costantini, M. Stoffel, R. Esteban, A. Bittner, A. Rastelli, U. Denker, O. Schmidt, K. Kern, Physical Review B - Condensed Matter and Materials Physics 72 (2005).

Pyramids and domes in the InAs/GaAs (0 0 1) and Ge/Si (0 0 1) systems
G. Costantini, A. Rastelli, C. Manzano, P. Acosta Diaz, G. Katsaros, R. Songmuang, O. Schmidt, H. Von Känel, K. Kern, Journal of Crystal Growth 278 (2005) 38–45.

Periodic pillar structures by Si etching of multilayer GeSi/Si islands
Z. Zhong, G. Katsaros, M. Stoffel, G. Costantini, K. Kern, O. Schmidt, N. Jin Phillipp, G. Bauer, Applied Physics Letters 87 (2005) 1–3.

Non linear transmission effects in duobinary and dicode optical systems
G. Katsaros, I. Darwazeh, P. Lane, IEE Proceedings - Optoelectronics 152 (2005) 344–352.

Lateral motion of SiGe islands driven by surface-mediated alloying
U. Denker, A. Rastelli, M. Stoffel, J. Tersoff, G. Katsaros, G. Costantini, K. Kern, N. Jin Phillipp, D. Jesson, O. Schmidt, Physical Review Letters 94 (2005).