[{"file":[{"creator":"lbecker","file_size":4263,"content_type":"text/plain","file_id":"21146","relation":"table_of_contents","date_updated":"2026-02-05T13:52:37Z","checksum":"02a419cce8cea450bc952f35488d2df5","file_name":"README.txt","date_created":"2026-02-05T13:52:37Z","access_level":"open_access"},{"relation":"main_file","date_updated":"2026-02-05T13:52:41Z","checksum":"b0b82b1aa73985b0b308a3fa52d21aea","date_created":"2026-02-05T13:52:41Z","access_level":"open_access","file_name":"Research_Data.zip","file_size":50647107,"creator":"lbecker","file_id":"21147","content_type":"application/zip","success":1}],"acknowledged_ssus":[{"_id":"NMR"},{"_id":"LifeSc"}],"day":"09","author":[{"first_name":"Lea Marie","full_name":"Becker, Lea Marie","orcid":"0000-0002-6401-5151","last_name":"Becker","id":"36336939-eb97-11eb-a6c2-c83f1214ca79"},{"first_name":"Paul","full_name":"Schanda, Paul","last_name":"Schanda","orcid":"0000-0002-9350-7606","id":"7B541462-FAF6-11E9-A490-E8DFE5697425"},{"full_name":"Chipot, Christophe","first_name":"Christophe","last_name":"Chipot"}],"license":"https://creativecommons.org/licenses/by-nc/4.0/","contributor":[{"last_name":"Fu","first_name":"Haohao","contributor_type":"researcher"},{"contributor_type":"researcher","first_name":"Benjamin","last_name":"Tatman","id":"71cda2f3-e604-11ee-a1df-da10587eda3f"},{"last_name":"Dreydoppel","first_name":"Matthias","contributor_type":"researcher"},{"first_name":"Anna","contributor_type":"researcher","last_name":"Kapitonova","id":"9fb2a840-89e1-11ee-a8b7-cc5c7ba62471"},{"contributor_type":"researcher","first_name":"Daniel","last_name":"Balazs","id":"302BADF6-85FC-11EA-9E3B-B9493DDC885E","orcid":"0000-0001-7597-043X"},{"last_name":"Weininger","contributor_type":"researcher","first_name":"Ulrich"},{"first_name":"Sylvain","contributor_type":"researcher","last_name":"Engilberge"}],"oa":1,"date_published":"2026-02-09T00:00:00Z","date_created":"2026-02-05T13:54:39Z","type":"research_data","related_material":{"record":[{"status":"public","relation":"earlier_version","id":"20641"},{"relation":"used_in_publication","status":"public","id":"22105"}]},"status":"public","year":"2026","tmp":{"image":"/images/cc_by_nc.png","short":"CC BY-NC (4.0)","name":"Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc/4.0/legalcode"},"fulldoi":"https://doi.org/10.15479/AT-ISTA-21145","project":[{"name":"Exploring protein dynamics by solid-state MAS NMR through specific labeling approaches","_id":"7be609c4-9f16-11ee-852c-85015ce2b9b0","grant_number":"26777"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","month":"02","oa_version":"Published Version","title":"Additional Data for \"Aromatic Ring Flips Reveal Reshaping of Protein Dynamics in Crystals and Complexes\"","acknowledgement":"We thank Nikolai R. Skrynnikov and Olga O. Lebedenko (St. Petersburg) for insightful discussions and for performing exploratory MD simulations. We are grateful to Tobias Schubeis (Lyon) for advice with GB1 crystallization, and Rebecca Schmid for initial crystallization trials.\r\nWe thank Sebastian Falkner for assistance with constructing the structural model of the IgG:GB1 complex.\r\nThis research was supported by the Scientific Service Units (SSU) of Institute of Science and Technology Austria (ISTA) through resources provided by the Nuclear Magnetic Resonance and the Lab Support Facilities. We thank Petra Rovó and Margarita Valhondo Falcón for excellent support of the NMR facility.\r\nLea M. Becker is recipient of a DOC fellowship of the Austrian Academy of Sciences at the Institute of Science and Technology Austria (grant no. PR10660EAW01). Christophe Chipot acknowledges the European Research Council (grant project 101097272 ``MilliInMicro'') and the Métropole du Grand Nancy (grant project ``ARC''). BM07-FIP2 is supported by the French ANR PIA3 (France 2030) EquipEx+ project MAGNIFIX under grant agreement ANR-21-ESRE-0011.","_id":"21145","publisher":"Institute of Science and Technology Austria","date_updated":"2026-08-04T09:32:45Z","ddc":["572"],"has_accepted_license":"1","department":[{"_id":"GradSch"},{"_id":"PaSc"}],"corr_author":"1","file_date_updated":"2026-02-05T13:52:41Z","citation":{"mla":"Becker, Lea Marie, et al. <i>Additional Data for “Aromatic Ring Flips Reveal Reshaping of Protein Dynamics in Crystals and Complexes.”</i> Institute of Science and Technology Austria, 2026, doi:<a href=\"https://doi.org/10.15479/AT-ISTA-21145\">10.15479/AT-ISTA-21145</a>.","apa":"Becker, L. M., Schanda, P., &#38; Chipot, C. (2026). Additional Data for “Aromatic Ring Flips Reveal Reshaping of Protein Dynamics in Crystals and Complexes.” Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT-ISTA-21145\">https://doi.org/10.15479/AT-ISTA-21145</a>","short":"L.M. Becker, P. Schanda, C. Chipot, (2026).","chicago":"Becker, Lea Marie, Paul Schanda, and Christophe Chipot. “Additional Data for ‘Aromatic Ring Flips Reveal Reshaping of Protein Dynamics in Crystals and Complexes.’” Institute of Science and Technology Austria, 2026. <a href=\"https://doi.org/10.15479/AT-ISTA-21145\">https://doi.org/10.15479/AT-ISTA-21145</a>.","ama":"Becker LM, Schanda P, Chipot C. Additional Data for “Aromatic Ring Flips Reveal Reshaping of Protein Dynamics in Crystals and Complexes.” 2026. doi:<a href=\"https://doi.org/10.15479/AT-ISTA-21145\">10.15479/AT-ISTA-21145</a>","ieee":"L. M. Becker, P. Schanda, and C. Chipot, “Additional Data for ‘Aromatic Ring Flips Reveal Reshaping of Protein Dynamics in Crystals and Complexes.’” Institute of Science and Technology Austria, 2026.","ista":"Becker LM, Schanda P, Chipot C. 2026. Additional Data for ‘Aromatic Ring Flips Reveal Reshaping of Protein Dynamics in Crystals and Complexes’, Institute of Science and Technology Austria, <a href=\"https://doi.org/10.15479/AT-ISTA-21145\">10.15479/AT-ISTA-21145</a>."},"doi":"10.15479/AT-ISTA-21145","abstract":[{"lang":"eng","text":"Protein conformational energy landscapes are shaped not only by intramolecular interactions but also by their environment. In protein crystals and protein-protein complexes, intermolecular contacts alter this energy landscape, but the exact nature of this alteration is difficult to decipher. Understanding how the crystal lattice affects protein dynamics is crucial for crystallography-based studies of motion, yet its influence on collective motions remains unclear. Aromatic ring flips in the hydrophobic core represent sensitive probes of such dynamics. Here, we compare the kinetics of aromatic ring flips in the protein GB1 in crystals, in complex with its binding partner IgG, and in solution, combining advanced isotope labeling with quantitative NMR methods. We show that rings in the core flip nearly a thousand times less frequently in crystals than in solution. Enhanced-sampling molecular dynamics simulations, based on a new crystal structure, reproduce these elevated barriers and reveal how the crystal restrains motions. "}],"article_processing_charge":"No"},{"project":[{"grant_number":"101165631","_id":"914d8549-16d5-11f0-9cad-bbe6324c93a9","name":"Unveiling the mysteries of stellar dynamics: a pioneering journey in magnetoasteroseismology"},{"grant_number":"27648","name":"Unveiling the structure and dynamics of the deep convective core - radiative zone boundary throughout stellar evolution","_id":"5b62812b-ab3d-11f0-914f-8f3a9cdb4af7"}],"article_number":"L14","dataavailabilitystatement":"We used MESA version 24.08.1. All inlists and relevant files are available on Zenodo at https://doi.org/10.5281/zenodo.19232789","oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","language":[{"iso":"eng"}],"month":"04","scopus_import":"1","publisher":"EDP Sciences","_id":"22663","ddc":["520"],"date_updated":"2026-08-11T05:49:20Z","acknowledgement":"The authors thank the referee for their helpful and constructive report, which has significantly enhanced the quality of the manuscript.\r\nThe authors thank I. Caiazzo, L. Ferrario, and L. Buchele for very useful discussions. L. Barrault, L. Bugnet, and L. Einramhof gratefully acknowledge support from the European Research Council (ERC) under the Horizon Europe\r\nprogramme (Calcifer; Starting Grant agreement N◦101165631). L. Barrault\r\nacknowledges the support of the Austrian Academy of Sciences through the Doctoral Fellowship Programme (DOC) of the Austrian Academy of Sciences 27648.\r\nWhile partially funded by the European Union, views and opinions expressed\r\nare, however, those of the authors only and do not necessarily reflect those of the European Union or the European Research Council. Neither the European Union\r\nnor the granting authority can be held responsible for them.","external_id":{"arxiv":["2601.15203"]},"title":"Magneto-archeology of white dwarfs","article_processing_charge":"No","DOAJ_listed":"1","citation":{"ama":"Einramhof L, Bugnet LA, Calcaferro LM, Barrault L, Das SB. Magneto-archeology of white dwarfs. <i>Astronomy &#38; Astrophysics</i>. 2026;708. doi:<a href=\"https://doi.org/10.1051/0004-6361/202659069\">10.1051/0004-6361/202659069</a>","short":"L. Einramhof, L.A. Bugnet, L.M. Calcaferro, L. Barrault, S.B. Das, Astronomy &#38; Astrophysics 708 (2026).","chicago":"Einramhof, Lukas, Lisa Annabelle Bugnet, L. M. Calcaferro, Lucas Barrault, and S. B. Das. “Magneto-Archeology of White Dwarfs.” <i>Astronomy &#38; Astrophysics</i>. EDP Sciences, 2026. <a href=\"https://doi.org/10.1051/0004-6361/202659069\">https://doi.org/10.1051/0004-6361/202659069</a>.","ista":"Einramhof L, Bugnet LA, Calcaferro LM, Barrault L, Das SB. 2026. Magneto-archeology of white dwarfs. Astronomy &#38; Astrophysics. 708, L14.","ieee":"L. Einramhof, L. A. Bugnet, L. M. Calcaferro, L. Barrault, and S. B. Das, “Magneto-archeology of white dwarfs,” <i>Astronomy &#38; Astrophysics</i>, vol. 708. EDP Sciences, 2026.","apa":"Einramhof, L., Bugnet, L. A., Calcaferro, L. M., Barrault, L., &#38; Das, S. B. (2026). Magneto-archeology of white dwarfs. <i>Astronomy &#38; Astrophysics</i>. EDP Sciences. <a href=\"https://doi.org/10.1051/0004-6361/202659069\">https://doi.org/10.1051/0004-6361/202659069</a>","mla":"Einramhof, Lukas, et al. “Magneto-Archeology of White Dwarfs.” <i>Astronomy &#38; Astrophysics</i>, vol. 708, L14, EDP Sciences, 2026, doi:<a href=\"https://doi.org/10.1051/0004-6361/202659069\">10.1051/0004-6361/202659069</a>."},"file_date_updated":"2026-08-11T05:46:02Z","doi":"10.1051/0004-6361/202659069","publication_identifier":{"issn":["0004-6361"],"eissn":["1432-0746"]},"abstract":[{"text":"The detection of strong, large-scale magnetic fields at the surfaces of the oldest white dwarfs might point toward a hidden internal magnetic field slowly rising to the surface. In addition, strong magnetic fields have recently been measured through asteroseismology in the radiative interiors of red giant stars, the progenitors of white dwarfs. To investigate the potential connection between these observations, we revisited the fossil field framework using asteroseismic detections to constrain the strength of such magnetic fields as red giants evolve into the white dwarf stage. We assumed that the magnetic field was either created during the core convection on the main sequence or that it fills the radiative interior as the star evolves on the red giant branch. From these initial conditions, we evolved the magnetic flux, allowing for magnetic diffusion along the evolution of a modeled 1.5 M⊙ star. We find that measured field strengths in red giants attributed to the hydrogen-burning shell are compatible with the field amplitudes and emergence timescales of magnetized white dwarfs. On the contrary, magnetic fields generated solely from a convective-core dynamo on the main sequence and detectable on the red giant branch would be buried too deep in the star and would not match the breakout timescales or the field strengths of magnetic white dwarfs. Therefore, for us to connect magnetic fields observed along the late evolution of stars via a fossil field we would need to find a broadly magnetized internal radiative zone on the red giant branch.","lang":"eng"}],"corr_author":"1","has_accepted_license":"1","department":[{"_id":"LiBu"},{"_id":"GradSch"}],"article_type":"original","OA_type":"diamond","quality_controlled":"1","file":[{"file_id":"22671","content_type":"application/pdf","success":1,"file_size":3739424,"creator":"dernst","access_level":"open_access","date_created":"2026-08-11T05:46:02Z","file_name":"2026_AstronomyAstrophysics_Einramhof.pdf","checksum":"61edee776603d7b879b06b3ea8d2bc89","date_updated":"2026-08-11T05:46:02Z","relation":"main_file"}],"volume":708,"supplementarymaterial":"yes","OA_place":"publisher","das_tickbox":"1","author":[{"last_name":"Einramhof","id":"f1497a1a-72ef-11ef-b75a-fd877bbf6e8c","first_name":"Lukas","full_name":"Einramhof, Lukas"},{"orcid":"0000-0003-0142-4000","last_name":"Bugnet","id":"d9edb345-f866-11ec-9b37-d119b5234501","first_name":"Lisa Annabelle","full_name":"Bugnet, Lisa Annabelle"},{"last_name":"Calcaferro","first_name":"L. M.","full_name":"Calcaferro, L. M."},{"id":"4471a8fd-32c1-11ee-a9a4-fb670d398f64","last_name":"Barrault","first_name":"Lucas","full_name":"Barrault, Lucas"},{"first_name":"S. B.","full_name":"Das, S. B.","last_name":"Das"}],"day":"01","intvolume":"       708","researchdata_availability":"yes","PlanS_conform":"1","status":"public","year":"2026","type":"journal_article","date_created":"2026-08-10T07:53:32Z","oa":1,"date_published":"2026-04-01T00:00:00Z","publication_status":"published","arxiv":1,"fulldoi":"https://doi.org/10.1051/0004-6361/202659069","publication":"Astronomy & Astrophysics","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"}},{"OA_type":"gold","file":[{"creator":"dernst","file_size":2902144,"success":1,"file_id":"22329","content_type":"application/pdf","relation":"main_file","date_updated":"2026-07-14T06:08:05Z","checksum":"9dfb96ee66985c724b499b0e5888dc8e","file_name":"2026_LIPIcSSoCG_Edelsbrunner.pdf","date_created":"2026-07-14T06:08:05Z","access_level":"open_access"}],"quality_controlled":"1","supplementarymaterial":"no","volume":367,"OA_place":"publisher","ec_funded":1,"das_tickbox":"0","author":[{"full_name":"Edelsbrunner, Herbert","first_name":"Herbert","orcid":"0000-0002-9823-6833","id":"3FB178DA-F248-11E8-B48F-1D18A9856A87","last_name":"Edelsbrunner"},{"id":"dfffb474-4317-11ee-8f5c-fe3fc95a425e","last_name":"Lipiński","orcid":"0000-0001-9789-9750","first_name":"Michał","full_name":"Lipiński, Michał"},{"full_name":"Mrozek, Marian","first_name":"Marian","orcid":"0000-0002-0619-6417","last_name":"Mrozek"},{"first_name":"Manuel","full_name":"Soriano Trigueros, Manuel","orcid":"0000-0003-2449-1433","last_name":"Soriano Trigueros","id":"15ebd7cf-15bf-11ee-aebd-bb4bb5121ea8"},{"last_name":"Zimin","id":"afd27eda-91c1-11f0-aad8-c6edbec24c04","first_name":"Fedor","full_name":"Zimin, Fedor"}],"day":"27","year":"2026","status":"public","researchdata_availability":"no","intvolume":"       367","type":"conference","date_created":"2026-07-13T09:56:38Z","date_published":"2026-05-27T00:00:00Z","oa":1,"fulldoi":"https://doi.org/10.4230/LIPICS.SOCG.2026.41","publication_status":"published","arxiv":1,"tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"publication":"42nd International Symposium on Computational Geometry","conference":{"location":"New Brunswick, NJ, United States","start_date":"2026-06-02","name":"SoCG: Symposium on Computational Geometry","end_date":"2026-06-05"},"project":[{"call_identifier":"FWF","_id":"2561EBF4-B435-11E9-9278-68D0E5697425","name":"Persistence and stability of geometric complexes","grant_number":"I02979-N35"},{"grant_number":"101034413","_id":"fc2ed2f7-9c52-11eb-aca3-c01059dda49c","name":"IST-BRIDGE: International postdoctoral program","call_identifier":"H2020"}],"article_number":"41:1-41:18","oa_version":"Published Version","month":"05","language":[{"iso":"eng"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","scopus_import":"1","ddc":["500"],"date_updated":"2026-08-12T09:02:56Z","publisher":"Schloss Dagstuhl - Leibniz-Zentrum für Informatik","_id":"22299","external_id":{"arxiv":["2511.21961"]},"acknowledgement":"The authors thank Jakub Leśkiewicz and Bartosz Furmanek for discussions\r\nthat helped improve the paper. Herbert Edelsbrunner: DFG Collaborative Research Center TRR 109, Austrian Science\r\nFund (FWF), grant no. I 02979-N35\r\nMichał Lipiński: European Union’s Horizon 2020 research and innovation programme under the\r\nMarie Skłodowska-Curie Grant Agreement No. 101034413\r\nMarian Mrozek: Polish National Science Center under Opus Grant 2019/35/B/ST1/00874 and Opus\r\nGrant 2025/57/B/ST1/00550","title":"The depth poset under transpositions in the filter","article_processing_charge":"Yes","abstract":[{"text":"The depth poset of a filtered Lefschetz complex reflects the dependencies between the cancellations of different shallow birth-death pairs. Using the fast algorithms for computing the depth poset in [Edelsbrunner et al., 2026] and for updating the persistence diagram under transpositions in [Cohen-Steiner et al., 2006], we give a complete case analysis of how transpositions of cells in the filter affect the depth poset. In addition, we present statistics on the depth poset for random point data and its sensitivity to the transpositions that occur in random straight-line homotopies.","lang":"eng"}],"publication_identifier":{"isbn":["9783959774185"],"eissn":["1868-8969"]},"citation":{"ieee":"H. Edelsbrunner, M. Lipiński, M. Mrozek, M. Soriano Trigueros, and F. Zimin, “The depth poset under transpositions in the filter,” in <i>42nd International Symposium on Computational Geometry</i>, New Brunswick, NJ, United States, 2026, vol. 367.","ista":"Edelsbrunner H, Lipiński M, Mrozek M, Soriano Trigueros M, Zimin F. 2026. The depth poset under transpositions in the filter. 42nd International Symposium on Computational Geometry. SoCG: Symposium on Computational Geometry, LIPIcs, vol. 367, 41:1-41:18.","chicago":"Edelsbrunner, Herbert, Michał Lipiński, Marian Mrozek, Manuel Soriano Trigueros, and Fedor Zimin. “The Depth Poset under Transpositions in the Filter.” In <i>42nd International Symposium on Computational Geometry</i>, Vol. 367. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2026. <a href=\"https://doi.org/10.4230/LIPICS.SOCG.2026.41\">https://doi.org/10.4230/LIPICS.SOCG.2026.41</a>.","short":"H. Edelsbrunner, M. Lipiński, M. Mrozek, M. Soriano Trigueros, F. Zimin, in:, 42nd International Symposium on Computational Geometry, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2026.","ama":"Edelsbrunner H, Lipiński M, Mrozek M, Soriano Trigueros M, Zimin F. The depth poset under transpositions in the filter. In: <i>42nd International Symposium on Computational Geometry</i>. Vol 367. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2026. doi:<a href=\"https://doi.org/10.4230/LIPICS.SOCG.2026.41\">10.4230/LIPICS.SOCG.2026.41</a>","mla":"Edelsbrunner, Herbert, et al. “The Depth Poset under Transpositions in the Filter.” <i>42nd International Symposium on Computational Geometry</i>, vol. 367, 41:1-41:18, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2026, doi:<a href=\"https://doi.org/10.4230/LIPICS.SOCG.2026.41\">10.4230/LIPICS.SOCG.2026.41</a>.","apa":"Edelsbrunner, H., Lipiński, M., Mrozek, M., Soriano Trigueros, M., &#38; Zimin, F. (2026). The depth poset under transpositions in the filter. In <i>42nd International Symposium on Computational Geometry</i> (Vol. 367). New Brunswick, NJ, United States: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href=\"https://doi.org/10.4230/LIPICS.SOCG.2026.41\">https://doi.org/10.4230/LIPICS.SOCG.2026.41</a>"},"doi":"10.4230/LIPICS.SOCG.2026.41","file_date_updated":"2026-07-14T06:08:05Z","keyword":["Algebraic topology","Lefschetz complexes","persistent homology","vines and vineyards","birth-death pairs","shallow pairs","relations","partial orders","transpositions","Theory of computation → Computational geometry"],"alternative_title":["LIPIcs"],"corr_author":"1","department":[{"_id":"HeEd"},{"_id":"GradSch"}],"has_accepted_license":"1"},{"oa":1,"date_published":"2026-07-24T00:00:00Z","date_created":"2026-08-16T22:01:44Z","type":"conference","intvolume":"     16682","researchdata_availability":"yes","year":"2026","status":"public","conference":{"location":"Lisbon, Portugal","start_date":"2026-07-26","end_date":"2026-07-29","name":"CAV: Computer Aided Verification"},"publication":"38th International Conference on Computer Aided Verification","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"publication_status":"published","arxiv":1,"fulldoi":"https://doi.org/10.1007/978-3-032-32519-8_12","volume":16682,"supplementarymaterial":"no","quality_controlled":"1","file":[{"relation":"main_file","date_updated":"2026-08-18T06:53:22Z","checksum":"10ded8a3ab9ed34c9e4794c0b277622c","date_created":"2026-08-18T06:53:22Z","access_level":"open_access","file_name":"2026_LNCS_Brice.pdf","file_size":1902192,"creator":"dernst","content_type":"application/pdf","file_id":"22724","success":1}],"OA_type":"hybrid","day":"24","author":[{"id":"ce3b3409-db6c-11f0-aa64-ad678f7fd937","last_name":"Brice","first_name":"Leonard J","full_name":"Brice, Leonard J"},{"orcid":"0000-0002-2985-7724","last_name":"Henzinger","id":"40876CD8-F248-11E8-B48F-1D18A9856A87","full_name":"Henzinger, Thomas A","first_name":"Thomas A"},{"id":"709a7f96-8896-11f0-9809-d75612fc0f2e","last_name":"Montaseri","full_name":"Montaseri, Alipasha","first_name":"Alipasha"},{"last_name":"Shafiee","id":"2783031a-7378-11f0-b2d0-f17f1db2ebad","full_name":"Shafiee, Ali","first_name":"Ali"},{"full_name":"Thejaswini, K. S.","first_name":"K. S.","last_name":"Thejaswini"}],"das_tickbox":"1","page":"215-236","ec_funded":1,"OA_place":"publisher","title":"Randomise alone, reach as a team","acknowledgement":"This work is a part of project VAMOS that has received funding from the European Research Council (ERC), grant agreement No 101020093. Part of this work was realised when the first author was an FNRS aspirant at Université libre de Bruxelles.","external_id":{"arxiv":["2603.07094"]},"_id":"22717","publisher":"Springer Nature","date_updated":"2026-08-18T06:55:38Z","ddc":["000"],"has_accepted_license":"1","department":[{"_id":"ToHe"},{"_id":"GradSch"}],"citation":{"ista":"Brice LJ, Henzinger TA, Montaseri A, Shafiee A, Thejaswini KS. 2026. Randomise alone, reach as a team. 38th International Conference on Computer Aided Verification. CAV: Computer Aided Verification vol. 16682, 215–236.","ieee":"L. J. Brice, T. A. Henzinger, A. Montaseri, A. Shafiee, and K. S. Thejaswini, “Randomise alone, reach as a team,” in <i>38th International Conference on Computer Aided Verification</i>, Lisbon, Portugal, 2026, vol. 16682, pp. 215–236.","ama":"Brice LJ, Henzinger TA, Montaseri A, Shafiee A, Thejaswini KS. Randomise alone, reach as a team. In: <i>38th International Conference on Computer Aided Verification</i>. Vol 16682. Springer Nature; 2026:215-236. doi:<a href=\"https://doi.org/10.1007/978-3-032-32519-8_12\">10.1007/978-3-032-32519-8_12</a>","chicago":"Brice, Leonard J, Thomas A Henzinger, Alipasha Montaseri, Ali Shafiee, and K. S. Thejaswini. “Randomise Alone, Reach as a Team.” In <i>38th International Conference on Computer Aided Verification</i>, 16682:215–36. Springer Nature, 2026. <a href=\"https://doi.org/10.1007/978-3-032-32519-8_12\">https://doi.org/10.1007/978-3-032-32519-8_12</a>.","short":"L.J. Brice, T.A. Henzinger, A. Montaseri, A. Shafiee, K.S. Thejaswini, in:, 38th International Conference on Computer Aided Verification, Springer Nature, 2026, pp. 215–236.","apa":"Brice, L. J., Henzinger, T. A., Montaseri, A., Shafiee, A., &#38; Thejaswini, K. S. (2026). Randomise alone, reach as a team. In <i>38th International Conference on Computer Aided Verification</i> (Vol. 16682, pp. 215–236). Lisbon, Portugal: Springer Nature. <a href=\"https://doi.org/10.1007/978-3-032-32519-8_12\">https://doi.org/10.1007/978-3-032-32519-8_12</a>","mla":"Brice, Leonard J., et al. “Randomise Alone, Reach as a Team.” <i>38th International Conference on Computer Aided Verification</i>, vol. 16682, Springer Nature, 2026, pp. 215–36, doi:<a href=\"https://doi.org/10.1007/978-3-032-32519-8_12\">10.1007/978-3-032-32519-8_12</a>."},"file_date_updated":"2026-08-18T06:53:22Z","doi":"10.1007/978-3-032-32519-8_12","publication_identifier":{"isbn":["9783032325181"],"eissn":["1611-3349"],"issn":["0302-9743"]},"abstract":[{"text":"We study concurrent graph games where n players cooperate against an opponent to reach a set of target states. Unlike traditional settings, we study distributed randomisation: team players do not share a source of randomness, and their private random sources are hidden from the opponent and from each other.\r\n\r\nWe show that memoryless strategies are sufficient for the threshold problem (deciding whether there is a strategy for the team that ensures winning with probability that exceeds a threshold), a result that not only places the problem in the Existential Theory of the Reals (ER) but also enables the construction of value iteration algorithms. We additionally show that the threshold problem is NP-hard. For the almost-sure reachability problem, we prove NP-completeness.\r\n\r\nWe introduce Individually Randomised Alternating-time Temporal Logic (IRATL). This logic extends the standard ATL framework to reason about probability thresholds, with semantics explicitly designed for coalitions that lack a shared source of randomness. On the practical side, we implement and evaluate a solver for the threshold and almost-sure problem based on the algorithms that we develop.","lang":"eng"}],"article_processing_charge":"Yes (in subscription journal)","dataavailabilitystatement":"The artifact can be accessed at the link: https://doi. org/10.5281/zenodo.19680359.\r\nThe source code is available at:https://github.com/alipashamontaseri/Team-Concurrent-Game.","project":[{"name":"Vigilant Algorithmic Monitoring of Software","_id":"62781420-2b32-11ec-9570-8d9b63373d4d","call_identifier":"H2020","grant_number":"101020093"}],"scopus_import":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","month":"07","language":[{"iso":"eng"}],"oa_version":"Published Version"},{"dataavailabilitystatement":"The code, trained models, and data-processing scripts are publicly available at https://github.\r\ncom/mb012/MLFF_representation. In addition, complete details of the models and optimization parameters are provided in Appendix G.3. The hardware resources used to produce the\r\nresults are specified in Appendix I.4. The loss functions, evaluation metrics, and details regarding\r\nablation studies are specified in Appendix G. These details ensure that all results reported in the paper\r\ncan be independently verified.","oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","month":"05","language":[{"iso":"eng"}],"ddc":["000","570"],"date_updated":"2026-08-18T06:36:55Z","_id":"22722","external_id":{"arxiv":["2505.23354"]},"acknowledgement":"This work was supported by the Institute of Science and Technology Austria (ISTA) through the IPC\r\ngrant “Generative Protein NMR” and by the Israeli Science Foundation (ISF) under grant number\r\n1834/24. This research used resources of the Institute of Science and Technology Austria’s scientific\r\ncomputing cluster. S.V. was supported in part by funding from the Eric and Wendy Schmidt Center at\r\nthe Broad Institute of MIT and Harvard.","title":"Representing local protein environments with machine learning force fields","article_processing_charge":"No","abstract":[{"lang":"eng","text":"The local structure of a protein strongly impacts its function and interactions\r\nwith other molecules. Representing local biomolecular environments remains a\r\nkey challenge while applying machine learning approaches over protein structures. The structural and chemical variability of these environments makes them\r\nchallenging to model, and performing representation learning on these objects\r\nremains largely under-explored. In this work, we propose representations for\r\nlocal protein environments that leverage intermediate features from machine learning force fields (MLFFs). We extensively benchmark state-of-the-art MLFFs,\r\ncomparing their performance across latent spaces and downstream tasks, and\r\nshow that their embeddings capture local structural (e.g., secondary motifs) and\r\nchemical features (e.g., amino acid identity and protonation state), organizing\r\nprotein environments into a structured manifold. We show that these representations enable zero-shot generalization and transfer across diverse downstream\r\ntasks. As a case study, we build a physics-informed, uncertainty-aware chemical shift predictor that achieves state-of-the-art accuracy in biomolecular NMR\r\nspectroscopy. Our results establish MLFFs as general-purpose, reusable representation learners for protein modeling, opening new directions in representation learning for structured physical systems. Code and data are available at\r\nhttps://github.com/mb012/MLFF_representation.\r\n"}],"citation":{"short":"M.I. Bojan, S. Vedula, S.A. Maddipatla, N.E. Sellam, A. Rzayev, F. Napoli, P. Schanda, A.M. Bronstein, in:, 14th International Conference on Learning Representations, 2026, pp. 100760–100799.","chicago":"Bojan, Meital I, Sanketh Vedula, Sai A Maddipatla, Nadav E Sellam, Anar Rzayev, Federico Napoli, Paul Schanda, and Alex M. Bronstein. “Representing Local Protein Environments with Machine Learning Force Fields.” In <i>14th International Conference on Learning Representations</i>, 2026:100760–99, 2026.","ama":"Bojan MI, Vedula S, Maddipatla SA, et al. Representing local protein environments with machine learning force fields. In: <i>14th International Conference on Learning Representations</i>. Vol 2026. ; 2026:100760-100799.","ieee":"M. I. Bojan <i>et al.</i>, “Representing local protein environments with machine learning force fields,” in <i>14th International Conference on Learning Representations</i>, Rio de Janeiro, Brazil, 2026, vol. 2026, pp. 100760–100799.","ista":"Bojan MI, Vedula S, Maddipatla SA, Sellam NE, Rzayev A, Napoli F, Schanda P, Bronstein AM. 2026. Representing local protein environments with machine learning force fields. 14th International Conference on Learning Representations. ICLR: International Conference on Learning Representations vol. 2026, 100760–100799.","mla":"Bojan, Meital I., et al. “Representing Local Protein Environments with Machine Learning Force Fields.” <i>14th International Conference on Learning Representations</i>, vol. 2026, 2026, pp. 100760–99.","apa":"Bojan, M. I., Vedula, S., Maddipatla, S. A., Sellam, N. E., Rzayev, A., Napoli, F., … Bronstein, A. M. (2026). Representing local protein environments with machine learning force fields. In <i>14th International Conference on Learning Representations</i> (Vol. 2026, pp. 100760–100799). Rio de Janeiro, Brazil."},"file_date_updated":"2026-08-18T06:33:14Z","corr_author":"1","department":[{"_id":"GradSch"},{"_id":"PaSc"},{"_id":"AlBr"}],"has_accepted_license":"1","OA_type":"gold","file":[{"success":1,"file_id":"22723","content_type":"application/pdf","creator":"dernst","file_size":8534339,"file_name":"2026_ICLR_Bojan.pdf","date_created":"2026-08-18T06:33:14Z","access_level":"open_access","relation":"main_file","date_updated":"2026-08-18T06:33:14Z","checksum":"9f43f5469443388ec55388d95c4cf243"}],"quality_controlled":"1","supplementarymaterial":"yes","volume":2026,"OA_place":"publisher","page":"100760-100799","das_tickbox":"1","author":[{"id":"11d88cf5-91ca-11f0-a95f-edf9f08f47b7","last_name":"Bojan","full_name":"Bojan, Meital I","first_name":"Meital I"},{"last_name":"Vedula","first_name":"Sanketh","full_name":"Vedula, Sanketh"},{"full_name":"Maddipatla, Sai A","first_name":"Sai A","id":"e957f5e5-91c9-11f0-a95f-e090f66ecb4d","last_name":"Maddipatla"},{"full_name":"Sellam, Nadav E","first_name":"Nadav E","last_name":"Sellam","id":"ef280fe0-91c9-11f0-a95f-8dea3f5bc513"},{"first_name":"Anar","full_name":"Rzayev, Anar","last_name":"Rzayev","id":"2cd60677-9acd-11f1-ae1a-a85ae1c4dd35"},{"id":"d42e08e7-f4fc-11eb-af0a-d71e26138f1b","orcid":"0000-0002-9043-136X","last_name":"Napoli","first_name":"Federico","full_name":"Napoli, Federico"},{"last_name":"Schanda","id":"7B541462-FAF6-11E9-A490-E8DFE5697425","orcid":"0000-0002-9350-7606","full_name":"Schanda, Paul","first_name":"Paul"},{"orcid":"0000-0001-9699-8730","id":"58f3726e-7cba-11ef-ad8b-e6e8cb3904e6","last_name":"Bronstein","full_name":"Bronstein, Alexander","first_name":"Alexander"}],"day":"01","acknowledged_ssus":[{"_id":"ScienComp"}],"year":"2026","status":"public","researchdata_availability":"yes","intvolume":"      2026","related_material":{"link":[{"url":"https://github.com/mb012/MLFF_representation","relation":"software"}]},"type":"conference","date_created":"2026-08-17T12:03:24Z","date_published":"2026-05-01T00:00:00Z","oa":1,"publication_status":"published","arxiv":1,"tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"publication":"14th International Conference on Learning Representations","conference":{"start_date":"2026-04-23","name":"ICLR: International Conference on Learning Representations","end_date":"2026-04-27","location":"Rio de Janeiro, Brazil"}},{"oa_version":"Published Version","main_file_link":[{"url":"https://doi.org/10.1038/s41556-026-02041-4","open_access":"1"}],"scopus_import":"1","month":"08","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","language":[{"iso":"eng"}],"project":[{"_id":"9136c684-16d5-11f0-9cad-91c0177b365f","name":"Circadian structural transitions of chromatin","grant_number":"101162145"}],"dataavailabilitystatement":"Proteomics data have been deposited to the ProteomeXchange Consortium via the PRIDE64 partner repository with the dataset identifiers PXD062751 and PXD077567. RNA-seq data are available in the European Nucleotide Archive (ENA) under accession no. PRJEB93884, and ChIP–seq data at the Gene Expression Omnibus (GEO) under accession no. GSE302237. AlphaFold 3 interaction prediction parameters can be provided during the revision process on editorial and/or review request. Source data are provided with this paper.","citation":{"short":"F. Aygenli, L.A. Huschet, T. Popp, A. Ribeiro, D. Barkhatova, C. Jouffe, R. Trozzo, J.S. Menet, R. Rad, K.A. Dyar, M. Lech, T. Straub, A.K. Michael, M.S. Robles, Nature Cell Biology (2026).","chicago":"Aygenli, Fatih, Lukas A. Huschet, Tanja Popp, Andrea Ribeiro, Darina Barkhatova, Céline Jouffe, Ricardo Trozzo, et al. “CLOCK/BMAL1 Interactome Uncovers Homeodomain Factors as Tissue Regulators.” <i>Nature Cell Biology</i>. Springer Nature, 2026. <a href=\"https://doi.org/10.1038/s41556-026-02041-4\">https://doi.org/10.1038/s41556-026-02041-4</a>.","ama":"Aygenli F, Huschet LA, Popp T, et al. CLOCK/BMAL1 interactome uncovers homeodomain factors as tissue regulators. <i>Nature Cell Biology</i>. 2026. doi:<a href=\"https://doi.org/10.1038/s41556-026-02041-4\">10.1038/s41556-026-02041-4</a>","ieee":"F. Aygenli <i>et al.</i>, “CLOCK/BMAL1 interactome uncovers homeodomain factors as tissue regulators,” <i>Nature Cell Biology</i>. Springer Nature, 2026.","ista":"Aygenli F, Huschet LA, Popp T, Ribeiro A, Barkhatova D, Jouffe C, Trozzo R, Menet JS, Rad R, Dyar KA, Lech M, Straub T, Michael AK, Robles MS. 2026. CLOCK/BMAL1 interactome uncovers homeodomain factors as tissue regulators. Nature Cell Biology.","mla":"Aygenli, Fatih, et al. “CLOCK/BMAL1 Interactome Uncovers Homeodomain Factors as Tissue Regulators.” <i>Nature Cell Biology</i>, Springer Nature, 2026, doi:<a href=\"https://doi.org/10.1038/s41556-026-02041-4\">10.1038/s41556-026-02041-4</a>.","apa":"Aygenli, F., Huschet, L. A., Popp, T., Ribeiro, A., Barkhatova, D., Jouffe, C., … Robles, M. S. (2026). CLOCK/BMAL1 interactome uncovers homeodomain factors as tissue regulators. <i>Nature Cell Biology</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41556-026-02041-4\">https://doi.org/10.1038/s41556-026-02041-4</a>"},"doi":"10.1038/s41556-026-02041-4","abstract":[{"text":"Circadian clocks underlie daily rhythms in physiology by coordinating temporal patterns of gene expression and protein function throughout the body. At the core of this system in mammals is CLOCK/BMAL1, a ubiquitously expressed heterodimeric transcription factor complex that orchestrates tissue-specific circadian gene expression. The basis for this specificity remains unclear, but tissue-specific interactions at chromatin could provide one. Here we used chromatin immunoprecipitation coupled to mass spectrometry to map CLOCK/BMAL1-associated protein complexes on chromatin in mouse liver, kidney and lung. We detected 1,510 associated proteins, most of which were tissue-specific and not explained by protein abundance. Among these, we identified the homeodomain transcription factors PROX1, HNF1B and HOXA5 as tissue-enriched interactors that bind BMAL1, co-occupy most BMAL1 genomic sites and establish organ-restricted circadian transcription. Our findings demonstrate that tissue-specific transcription factors confer cellular identity on the core clock, thereby contributing to organ-specific patterns of rhythmic gene expression.","lang":"eng"}],"publication_identifier":{"issn":["1465-7392"],"eissn":["1476-4679"]},"article_processing_charge":"Yes (via OA deal)","has_accepted_license":"1","department":[{"_id":"GradSch"},{"_id":"AlMi"}],"acknowledgement":"We thank all members of the Robles’ group for critical comments on and edits to this paper. We thank S. Kay for providing dihXY HCC cell lines and D. Firsov and Y. Bignon for mouse BMAL1-knockout (KO) kidney tissues. This work was supported by the German Research Foundation (DFG) project no. 213249687—SFB 1064 and RO 5675/1-1 to M.S.R., F.A. and L.A.H. M.S.R was also supported by DFG INST 86/1800-1 FUGG and LMU Munich’s Institutional Strategy LMU excellent within the framework of the German Excellence Initiative. J.S.M. was supported by US National Institutes of Health grant nos. R01GM145737 and R01DK128133. A.K.M. was supported by an ERC grant ‘ChromaChrono’ 101162145. Open access funding provided by Ludwig-Maximilians-Universität München.","external_id":{"pmid":["42562924"]},"publisher":"Springer Nature","_id":"22720","date_updated":"2026-08-18T08:03:22Z","ddc":["570"],"title":"CLOCK/BMAL1 interactome uncovers homeodomain factors as tissue regulators","das_tickbox":"1","OA_place":"publisher","day":"06","author":[{"first_name":"Fatih","full_name":"Aygenli, Fatih","last_name":"Aygenli"},{"last_name":"Huschet","full_name":"Huschet, Lukas A.","first_name":"Lukas A."},{"last_name":"Popp","full_name":"Popp, Tanja","first_name":"Tanja"},{"full_name":"Ribeiro, Andrea","first_name":"Andrea","last_name":"Ribeiro"},{"first_name":"Darina","full_name":"Barkhatova, Darina","id":"db547c8c-329f-11ee-a353-cde802618f9e","last_name":"Barkhatova","orcid":"0000-0002-0062-2817"},{"last_name":"Jouffe","full_name":"Jouffe, Céline","first_name":"Céline"},{"first_name":"Ricardo","full_name":"Trozzo, Ricardo","last_name":"Trozzo"},{"first_name":"Jerome S.","full_name":"Menet, Jerome S.","last_name":"Menet"},{"first_name":"Roland","full_name":"Rad, Roland","last_name":"Rad"},{"last_name":"Dyar","full_name":"Dyar, Kenneth A.","first_name":"Kenneth A."},{"last_name":"Lech","first_name":"Maciej","full_name":"Lech, Maciej"},{"last_name":"Straub","full_name":"Straub, Tobias","first_name":"Tobias"},{"full_name":"Michael, Alicia","first_name":"Alicia","id":"6437c950-2a03-11ee-914d-d6476dd7b75c","orcid":"0000-0002-6080-839X","last_name":"Michael"},{"last_name":"Robles","full_name":"Robles, Maria S.","first_name":"Maria S."}],"quality_controlled":"1","article_type":"original","OA_type":"hybrid","pmid":1,"supplementarymaterial":"yes","publication":"Nature Cell Biology","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"publication_status":"epub_ahead","fulldoi":"https://doi.org/10.1038/s41556-026-02041-4","type":"journal_article","PlanS_conform":"1","status":"public","year":"2026","researchdata_availability":"yes","oa":1,"date_published":"2026-08-06T00:00:00Z","date_created":"2026-08-16T22:01:44Z"},{"issue":"8","type":"journal_article","intvolume":"        11","PlanS_conform":"1","year":"2026","researchdata_availability":"no","status":"public","oa":1,"date_published":"2026-08-14T00:00:00Z","date_created":"2026-08-18T11:34:03Z","publication":"ACS Energy Letters","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"publication_status":"published","fulldoi":"https://doi.org/10.1021/acsenergylett.6c01499","quality_controlled":"1","file":[{"file_name":"2026_ACSEnergyLetters_Liu.pdf","date_created":"2026-08-19T05:52:41Z","access_level":"open_access","relation":"main_file","date_updated":"2026-08-19T05:52:41Z","checksum":"4d75c5a79d112c845c9eecba8838db38","success":1,"file_id":"22736","content_type":"application/pdf","creator":"dernst","file_size":6806815}],"OA_type":"hybrid","article_type":"letter_note","volume":11,"supplementarymaterial":"yes","das_tickbox":"0","page":"5752-5762","OA_place":"publisher","acknowledged_ssus":[{"_id":"EM-Fac"},{"_id":"LifeSc"},{"_id":"NanoFab"},{"_id":"MassSpec"}],"day":"14","author":[{"id":"2A70014E-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-7313-6740","last_name":"Liu","first_name":"Yu","full_name":"Liu, Yu"},{"full_name":"Kleinhanns, Tobias","first_name":"Tobias","orcid":"0000-0003-1537-7436","last_name":"Kleinhanns","id":"8BD9DE16-AB3C-11E9-9C8C-2A03E6697425"},{"full_name":"Spadaro, Maria Chiara","first_name":"Maria Chiara","last_name":"Spadaro"},{"first_name":"Aziz","full_name":"Genç, Aziz","last_name":"Genç"},{"first_name":"Sharona","full_name":"Horta, Sharona","id":"03a7e858-01b1-11ec-8b71-99ae6c4a05bc","last_name":"Horta"},{"id":"6ebe278d-ba0b-11ee-8184-f34cdc671de4","last_name":"Navita","orcid":"0000-0001-7408-8197","full_name":"Navita, Navita","first_name":"Navita"},{"last_name":"Costanzo","id":"D93824F4-D9BA-11E9-BB12-F207E6697425","orcid":"0000-0001-9732-3815","full_name":"Costanzo, Tommaso","first_name":"Tommaso"},{"last_name":"Dutkiewicz","id":"0601cc46-c082-11ec-9b07-bb29641d1de9","full_name":"Dutkiewicz, Ewelina","first_name":"Ewelina"},{"last_name":"Arbiol","full_name":"Arbiol, Jordi","first_name":"Jordi"},{"full_name":"Hong, Min","first_name":"Min","last_name":"Hong"},{"full_name":"Ibáñez, Maria","first_name":"Maria","last_name":"Ibáñez","orcid":"0000-0001-5013-2843","id":"43C61214-F248-11E8-B48F-1D18A9856A87"}],"acknowledgement":"Open access funding provided by Institute of Science and Technology Austria. M.I. acknowledges financial support from ISTA and the Werner Siemens Foundation. The Scientific Service Units (SSU) of ISTA supported this work through resources provided by the Electron Microscopy Facility (EMF), the Lab Support Facility (LSF), the Nanofabrication Facility (NNF), and the Mass Spectrometry Facility. Y.L. acknowledges funding from the National Natural Science Foundation of China (NSFC) (grant no. 22209034) and the Fundamental Research Funds for the Central Universities (JZ2024HGTB0239). M.H. acknowledges funding from Australian Research Council (FT230100316), and the high-performance computing resources provided by National Computational Infrastructure (it39) and Pawsey Supercomputing Centre (pawsey1075). ICN2 acknowledges funding from Generalitat de Catalunya 2021SGR00457. The authors thank support from the project AMaDE (PID2023-149158OB-C43), funded by MCIN/AEI/10.13039/501100011033/ and by the “ERDF Away of making Europe”, by the “European Union”. ICN2 is supported by the Severo Ochoa program from Spanish MCIN/AEI (grant no.: CEX2021-001214-S) and is funded by the CERCA Programme/Generalitat de Catalunya. Authors acknowledge the use of instrumentation as well as the technical advice provided by the Joint Electron Microscopy Center at ALBA (JEMCA). ICN2 acknowledges funding from Grant IU16-014206 (METCAM-FIB) funded by the European Union through the European Regional Development Fund (ERDF), with the support of the Ministry of Research and Universities, Generalitat de Catalunya. ICN2 is founding member of e-DREAM. (91)","publisher":"American Chemical Society","_id":"22734","ddc":["540"],"date_updated":"2026-08-19T05:53:33Z","title":"Exploiting mismatch strain and the β–α phase transition for microstructural engineering in thermoelectric Ag2Se","citation":{"short":"Y. Liu, T. Kleinhanns, M.C. Spadaro, A. Genç, S. Horta, N. Jakhar, T. Costanzo, E. Dutkiewicz, J. Arbiol, M. Hong, M. Ibáñez, ACS Energy Letters 11 (2026) 5752–5762.","chicago":"Liu, Yu, Tobias Kleinhanns, Maria Chiara Spadaro, Aziz Genç, Sharona Horta, Navita Jakhar, Tommaso Costanzo, et al. “Exploiting Mismatch Strain and the β–α Phase Transition for Microstructural Engineering in Thermoelectric Ag2Se.” <i>ACS Energy Letters</i>. American Chemical Society, 2026. <a href=\"https://doi.org/10.1021/acsenergylett.6c01499\">https://doi.org/10.1021/acsenergylett.6c01499</a>.","ama":"Liu Y, Kleinhanns T, Spadaro MC, et al. Exploiting mismatch strain and the β–α phase transition for microstructural engineering in thermoelectric Ag2Se. <i>ACS Energy Letters</i>. 2026;11(8):5752-5762. doi:<a href=\"https://doi.org/10.1021/acsenergylett.6c01499\">10.1021/acsenergylett.6c01499</a>","ieee":"Y. Liu <i>et al.</i>, “Exploiting mismatch strain and the β–α phase transition for microstructural engineering in thermoelectric Ag2Se,” <i>ACS Energy Letters</i>, vol. 11, no. 8. American Chemical Society, pp. 5752–5762, 2026.","ista":"Liu Y, Kleinhanns T, Spadaro MC, Genç A, Horta S, Jakhar N, Costanzo T, Dutkiewicz E, Arbiol J, Hong M, Ibáñez M. 2026. Exploiting mismatch strain and the β–α phase transition for microstructural engineering in thermoelectric Ag2Se. ACS Energy Letters. 11(8), 5752–5762.","mla":"Liu, Yu, et al. “Exploiting Mismatch Strain and the β–α Phase Transition for Microstructural Engineering in Thermoelectric Ag2Se.” <i>ACS Energy Letters</i>, vol. 11, no. 8, American Chemical Society, 2026, pp. 5752–62, doi:<a href=\"https://doi.org/10.1021/acsenergylett.6c01499\">10.1021/acsenergylett.6c01499</a>.","apa":"Liu, Y., Kleinhanns, T., Spadaro, M. C., Genç, A., Horta, S., Jakhar, N., … Ibáñez, M. (2026). Exploiting mismatch strain and the β–α phase transition for microstructural engineering in thermoelectric Ag2Se. <i>ACS Energy Letters</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acsenergylett.6c01499\">https://doi.org/10.1021/acsenergylett.6c01499</a>"},"file_date_updated":"2026-08-19T05:52:41Z","doi":"10.1021/acsenergylett.6c01499","publication_identifier":{"eissn":["2380-8195"]},"abstract":[{"text":"Silver selenide (Ag2Se) is a promising near-room-temperature thermoelectric material, but its narrow stoichiometric window and β–α phase transition complicate reproducible microstructure control. Here, we present a mismatch-assisted microstructure engineering strategy in which Ag2Se particles are treated with polyanionic ZnSe complexes and consolidated through the β–α transition to introduce ZnSe nanoprecipitates, Ag2Se/ZnSe interfaces, and local strain fields. The crystallographic mismatch between ZnSe and Ag2Se, together with the Zn2+/Ag+ size difference, amplifies phase-transition-induced deformation and promotes high-density dislocations with periodic strain modulations. This defect architecture suppresses grain coarsening, removes excess Ag, limits Ag-interstitial formation, and reduces lattice thermal conductivity through lattice softening and multiscale phonon scattering. Ag2Se–4%ZnSe nanocomposites achieve a peak zTmax of 1.13 at 369 K and a zTavg of 1.08 from 300 to 380 K, demonstrating mismatch-driven defect engineering through the β–α phase transition as a route for optimizing Ag2Se-based thermoelectrics.","lang":"eng"}],"article_processing_charge":"Yes (via OA deal)","has_accepted_license":"1","department":[{"_id":"MassSpec"},{"_id":"MaIb"},{"_id":"GradSch"},{"_id":"EM-Fac"}],"corr_author":"1","project":[{"_id":"9B8F7476-BA93-11EA-9121-9846C619BF3A","name":"HighTE: The Werner Siemens Laboratory for the High Throughput Discovery of Semiconductors for Waste Heat Recovery"}],"oa_version":"Published Version","scopus_import":"1","language":[{"iso":"eng"}],"month":"08","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87"},{"supervisor":[{"last_name":"Hausel","id":"4A0666D8-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-9582-2634","full_name":"Hausel, Tamás","first_name":"Tamás"}],"file":[{"date_updated":"2026-08-14T11:42:31Z","relation":"main_file","checksum":"2d0be77791dc296621c6c0f76be9d0d7","date_created":"2026-08-14T11:42:31Z","access_level":"open_access","file_name":"2026_Löwit_Jakub_Thesis.pdf","file_size":1574709,"creator":"jloewit","file_id":"22709","content_type":"application/pdf"},{"access_level":"closed","date_created":"2026-08-14T11:42:42Z","file_name":"2026_Löwit_Jakub_Source_files.zip","checksum":"61bde4b58c1e6c7baeb561e41f82659b","date_updated":"2026-08-14T11:42:42Z","relation":"source_file","content_type":"application/zip","file_id":"22710","file_size":1085118,"creator":"jloewit"}],"day":"05","author":[{"first_name":"Jakub","full_name":"Löwit, Jakub","id":"e3b80ae2-eb8e-11eb-b029-9aef4a9108a0","last_name":"Löwit"}],"doi_confirm":"1","page":"185","OA_place":"publisher","oa":1,"date_published":"2026-08-05T00:00:00Z","date_created":"2026-08-12T14:05:36Z","type":"dissertation","related_material":{"record":[{"id":"21751","relation":"part_of_dissertation","status":"public"},{"status":"public","id":"22693","relation":"part_of_dissertation"}]},"status":"public","year":"2026","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"publication_status":"published","fulldoi":"https://doi.org/10.15479/AT-ISTA-22694","project":[{"grant_number":"27004","name":"Arithmetic, geometry, topology and representation theory arising from the affine Grassmannian","_id":"901e2a43-16d5-11f0-9cad-9cead34748d6"},{"_id":"34b2c9cb-11ca-11ed-8bc3-a50ba74ca4a3","name":"Geometry of the tip of the global nilpotent cone","grant_number":"P35847"}],"language":[{"iso":"eng"}],"user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","month":"08","oa_version":"Published Version","title":"Equivariant K-theory of affine Grassmannians in representation theory and arithmetic","acknowledgement":"It was funded by a DOC Fellowship of the Austrian Academy of Sciences entitled Arithmetic,\r\ngeometry, topology and representation theory arising from the affine Grassmannian. It was\r\nfurther funded by the Austrian Science Fund FWF 10.55776/P35847, and an Erasmus+ staff\r\nmobility training. \r\n","degree_awarded":"PhD","publisher":"Institute of Science and Technology Austria","_id":"22694","date_updated":"2026-08-26T06:53:55Z","ddc":["510","516","512","514","513"],"has_accepted_license":"1","department":[{"_id":"GradSch"},{"_id":"TaHa"}],"corr_author":"1","alternative_title":["ISTA Thesis"],"file_date_updated":"2026-08-14T11:42:42Z","doi":"10.15479/AT-ISTA-22694","publisher_comment":"For open access purposes, the author has applied a CC BY public copyright\r\nlicense to any author-accepted manuscript version arising from this submission.","citation":{"apa":"Löwit, J. (2026). <i>Equivariant K-theory of affine Grassmannians in representation theory and arithmetic</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT-ISTA-22694\">https://doi.org/10.15479/AT-ISTA-22694</a>","mla":"Löwit, Jakub. <i>Equivariant K-Theory of Affine Grassmannians in Representation Theory and Arithmetic</i>. Institute of Science and Technology Austria, 2026, doi:<a href=\"https://doi.org/10.15479/AT-ISTA-22694\">10.15479/AT-ISTA-22694</a>.","ista":"Löwit J. 2026. Equivariant K-theory of affine Grassmannians in representation theory and arithmetic. Institute of Science and Technology Austria.","ieee":"J. Löwit, “Equivariant K-theory of affine Grassmannians in representation theory and arithmetic,” Institute of Science and Technology Austria, 2026.","ama":"Löwit J. Equivariant K-theory of affine Grassmannians in representation theory and arithmetic. 2026. doi:<a href=\"https://doi.org/10.15479/AT-ISTA-22694\">10.15479/AT-ISTA-22694</a>","chicago":"Löwit, Jakub. “Equivariant K-Theory of Affine Grassmannians in Representation Theory and Arithmetic.” Institute of Science and Technology Austria, 2026. <a href=\"https://doi.org/10.15479/AT-ISTA-22694\">https://doi.org/10.15479/AT-ISTA-22694</a>.","short":"J. Löwit, Equivariant K-Theory of Affine Grassmannians in Representation Theory and Arithmetic, Institute of Science and Technology Austria, 2026."},"publication_identifier":{"issn":["2663-337X"]},"abstract":[{"text":"We develop and employ techniques from equivariant algebraic K-theory and related invariants\r\nin the context of geometric representation theory, in both arithmetic and topological situations.\r\nWe showcase the use of such techniques on the affine Grassmannian Gr, a space of fundamental\r\ninterest in the geometric Langlands program.\r\n\r\nIt is a deep development of mathematics of the last century that many concrete, yet combina-\r\ntorially complex algebraic problems may be effectively studied through the lens of algebraic\r\ngeometry. The objects of interest can be often realized as cohomological invariants of algebraic\r\nvarieties, and good understanding of their geometry sheds light into the original questions.\r\nSuch techniques have seen immense applications in the Langlands program, where they go\r\nunder the label of geometric representation theory.\r\n\r\nOne source of powerful invariants in algebraic geometry comes from algebraic K-theory,\r\nHochschild homology, and their relatives. These localizing invariants contain large amount\r\nof information, but are quite hard to compute. For this reason, their usage in geometric\r\nrepresentation theory has been limited.\r\n\r\nThe aim of this thesis is to showcase how to control such invariants in the situations of\r\ninterest and use them to obtain new insights. We start by reinterpreting equivariant Hochschild\r\nhomology in terms of functions on certain fixed-point schemes, which are of independent\r\ninterest. We compare it to equivariant K-theory via the trace map. We give new computations\r\nand comparisons of such invariants of affine Schubert varieties in Gr, including arithmetic\r\nsituations. We show that they behave much better than expected.\r\n\r\nWe finally utilize this circle of ideas in a purely topological setting. We describe the varying\r\nfixed points of the extended torus action on the affine Grassmannian, and use it to compute\r\nits equivariant topological K-theory ring. The answer is nontrivial and verifies an outstanding\r\nconjecture in the subject.\r\n\r\nWe compare, partly conjecturally, the resulting K-theory ring to the completed center of an\r\nintegral even hybrid quantum group and its deformed quantum category O. This gives a\r\ngenuine application of our computations in pure representation theory.","lang":"eng"}],"article_processing_charge":"No"},{"acknowledgement":"I would like to thank the following people for fruitful discussions,\r\nhelpful sanity checks or comments on previous drafts: Roman Bezrukavnikov, Jens Niklas Eberhardt, Mischa Elkner, Tamás Hausel, Andres Fernandez Herrero, Adeel Khan,\r\nBernhard Köck, Andrei Konovalov, Quoc Ho, Mirko Mauri, Matthew Morrow, Charanya\r\nRavi, Kamil Rychlewicz, Shyiu Shen, Vladimir Sosnilo, Georg Tamme, Xinwen Zhu. I\r\nwould further like to thank Marc Hoyois and the anonymous referee for spotting an error\r\nin a previous version.\r\nThis work was done during author’s PhD at the Institute of Science and Technology Austria (ISTA). It was funded by a DOC Fellowship of the Austrian Academy\r\nof Sciences and by the Austrian Science Fund (FWF) 10.55776/P35847. For open access\r\npurposes, the author has applied a CC BY public copyright license to any author-accepted\r\nmanuscript version arising from this submission.","external_id":{"arxiv":["2409.18925"]},"publisher":"EMS Press","_id":"22693","date_updated":"2026-08-26T06:53:54Z","ddc":["500"],"title":"Equivariant K-theory, affine Grassmannian and perfection","citation":{"short":"J. Löwit, Documenta Mathematica (2026).","chicago":"Löwit, Jakub. “Equivariant K-Theory, Affine Grassmannian and Perfection.” <i>Documenta Mathematica</i>. EMS Press, 2026. <a href=\"https://doi.org/10.4171/dm/1064\">https://doi.org/10.4171/dm/1064</a>.","ama":"Löwit J. Equivariant K-theory, affine Grassmannian and perfection. <i>Documenta Mathematica</i>. 2026. doi:<a href=\"https://doi.org/10.4171/dm/1064\">10.4171/dm/1064</a>","ieee":"J. Löwit, “Equivariant K-theory, affine Grassmannian and perfection,” <i>Documenta Mathematica</i>. EMS Press, 2026.","ista":"Löwit J. 2026. Equivariant K-theory, affine Grassmannian and perfection. Documenta Mathematica.","mla":"Löwit, Jakub. “Equivariant K-Theory, Affine Grassmannian and Perfection.” <i>Documenta Mathematica</i>, EMS Press, 2026, doi:<a href=\"https://doi.org/10.4171/dm/1064\">10.4171/dm/1064</a>.","apa":"Löwit, J. (2026). Equivariant K-theory, affine Grassmannian and perfection. <i>Documenta Mathematica</i>. EMS Press. <a href=\"https://doi.org/10.4171/dm/1064\">https://doi.org/10.4171/dm/1064</a>"},"doi":"10.4171/dm/1064","abstract":[{"text":"We study torus-equivariant algebraic K-theory of affine Schubert varieties in the perfect affine Grassmannians over Fp. We further compare it to the torus-equivariant Hochschild homology of perfect complexes, which has a geometric description in terms of global functions on certain fixed-point schemes. We prove that Fp-linearly, this comparison is an isomorphism. Our approach is quite constructive, resulting in new computations of these K-theory rings. We establish various structural results for equivariant perfect algebraic K-theory on the way; we believe these are of independent interest.","lang":"eng"}],"publication_identifier":{"eissn":["1431-0643"],"issn":["1431-0635"]},"article_processing_charge":"Yes (in subscription journal)","has_accepted_license":"1","department":[{"_id":"GradSch"},{"_id":"TaHa"}],"corr_author":"1","keyword":["equivariant algebraic K-theory","perfection in positive characteristic","affine Grassmannian","affine Schubert varieties","Dennis trace map","equivariant Hochschild homology","fixed-point schemes","toric varieties"],"project":[{"grant_number":"P35847","_id":"34b2c9cb-11ca-11ed-8bc3-a50ba74ca4a3","name":"Geometry of the tip of the global nilpotent cone"}],"oa_version":"Published Version","main_file_link":[{"open_access":"1","url":"https://doi.org/10.4171/DM/1064"}],"scopus_import":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","language":[{"iso":"eng"}],"month":"03","type":"journal_article","related_material":{"record":[{"relation":"dissertation_contains","id":"22694","status":"public"}]},"mathsc":["19E08","19L47","20G44","14G17","19D55","14F43","14L30","14D24","14M25"],"status":"public","year":"2026","researchdata_availability":"no","PlanS_conform":"1","oa":1,"date_published":"2026-03-26T00:00:00Z","date_created":"2026-08-12T13:29:17Z","publication":"Documenta Mathematica","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"arxiv":1,"publication_status":"epub_ahead","fulldoi":"https://doi.org/10.4171/dm/1064","quality_controlled":"1","article_type":"original","OA_type":"hybrid","supplementarymaterial":"no","das_tickbox":"0","OA_place":"publisher","day":"26","author":[{"id":"e3b80ae2-eb8e-11eb-b029-9aef4a9108a0","last_name":"Löwit","first_name":"Jakub","full_name":"Löwit, Jakub"}]},{"type":"journal_article","issue":"6795","status":"public","year":"2026","intvolume":"       392","related_material":{"record":[{"status":"public","relation":"dissertation_contains","id":"22744"}]},"date_published":"2026-04-16T00:00:00Z","date_created":"2026-04-26T22:01:46Z","publication":"Science","fulldoi":"https://doi.org/10.1126/science.aea6343","publication_status":"published","quality_controlled":"1","pmid":1,"article_type":"original","OA_type":"closed access","volume":392,"ec_funded":1,"day":"16","acknowledged_ssus":[{"_id":"Bio"},{"_id":"ScienComp"},{"_id":"EM-Fac"},{"_id":"LifeSc"}],"author":[{"first_name":"Benjamin L","full_name":"Springstein, Benjamin L","last_name":"Springstein","id":"b4eb62ef-ac72-11ed-9503-ed3b4d66c083","orcid":"0000-0002-3461-5391"},{"first_name":"Manjunath","full_name":"Javoor, Manjunath","id":"305ab18b-dc7d-11ea-9b2f-b58195228ea2","orcid":"0000-0003-2311-2112","last_name":"Javoor"},{"last_name":"Megrian","full_name":"Megrian, Daniela","first_name":"Daniela"},{"first_name":"Roman","full_name":"Hajdu, Roman","id":"ffab949d-133f-11ed-8f02-94de21ace503","last_name":"Hajdu"},{"first_name":"Dustin M.","full_name":"Hanke, Dustin M.","last_name":"Hanke"},{"full_name":"Zens, Bettina","first_name":"Bettina","last_name":"Zens","orcid":"0000-0002-9561-1239","id":"45FD126C-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Gregor L.","full_name":"Weiss, Gregor L.","last_name":"Weiss"},{"full_name":"Schur, Florian Km","first_name":"Florian Km","orcid":"0000-0003-4790-8078","last_name":"Schur","id":"48AD8942-F248-11E8-B48F-1D18A9856A87"},{"orcid":"0000-0001-7309-9724","id":"462D4284-F248-11E8-B48F-1D18A9856A87","last_name":"Loose","full_name":"Loose, Martin","first_name":"Martin"}],"external_id":{"pmid":["41990175"]},"acknowledgement":"We thank all members of the Loose lab at ISTA for helpful discussions; M. Kojic for critical reading of the manuscript; A. Herrero (Sevilla University) for sharing her extensive BACTH plasmid library and other plasmids, as well as cyanobacterial strains; T. Dagan and F. Nies (both Kiel University) for sharing cyanobacterial strains and plasmids and for valuable discussions; N. Sapay and A. Michon for providing the Amphipaseek code, which enabled us to perform our large-scale amphipathic helix screen of cyanobacterial CorR proteins; V.-V. Hodirnau for support in cryo-ET data collection; and J. Hansen for advice about cryo-EM data processing.\r\nThis work was supported by the Scientific Service Units (SSU) of ISTA through resources provided by the Imaging & Optics Facility (IOF), the Scientific Computing (SciComp), the Electron Microscopy Facility (EMF), and the Lab Support Facility (LSF). This work was funded by the European Union’s Horizon 2020 research and innovation program (Marie Skłodowska-Curie grant 101034413 to B.L.S.); the European Research Council (ERC) of the European Union (grant ActinID 101076260 to F.K.M.S.); the Swiss National Science Foundation (starting grant TMSGI3_226208 to G.L.W.); and the Jean-Jacques et Letitia Lopez-Loreta Foundation (G.L.W.).","date_updated":"2026-09-03T09:36:24Z","publisher":"AAAS","_id":"21762","title":"Repurposing of a DNA segregation machinery into a cytoskeletal system controlling cell shape","publication_identifier":{"issn":["0036-8075"],"eissn":["1095-9203"]},"abstract":[{"lang":"eng","text":"Bacteria, like eukaryotes, use conserved cytoskeletal systems for intracellular organization. The plasmid-encoded ParMRC system forms actin-like filaments that segregate low–copy number plasmids. In multicellular cyanobacteria such as Anabaena sp., we found that a chromosomally encoded ParMR system has evolved into a cytoskeletal system named CorMR with a function in cell shape control rather than DNA segregation. Live-cell imaging, in vitro reconstitution, and cryo–electron microscopy revealed that CorM formed dynamically unstable, antiparallel double-stranded filaments that were recruited to the membrane by CorR through an amphipathic helix conserved in multicellular cyanobacteria. CorMR filaments were regulated by MinC, which excluded them from the poles and division plane. Comparative genomics indicated that the repurposing of ParMR and Min systems coevolved with cyanobacterial multicellularity, highlighting the evolutionary plasticity of cytoskeletal systems in bacteria."}],"citation":{"mla":"Springstein, Benjamin L., et al. “Repurposing of a DNA Segregation Machinery into a Cytoskeletal System Controlling Cell Shape.” <i>Science</i>, vol. 392, no. 6795, eaea6343, AAAS, 2026, doi:<a href=\"https://doi.org/10.1126/science.aea6343\">10.1126/science.aea6343</a>.","apa":"Springstein, B. L., Javoor, M., Megrian, D., Hajdu, R., Hanke, D. M., Zens, B., … Loose, M. (2026). Repurposing of a DNA segregation machinery into a cytoskeletal system controlling cell shape. <i>Science</i>. AAAS. <a href=\"https://doi.org/10.1126/science.aea6343\">https://doi.org/10.1126/science.aea6343</a>","ieee":"B. L. Springstein <i>et al.</i>, “Repurposing of a DNA segregation machinery into a cytoskeletal system controlling cell shape,” <i>Science</i>, vol. 392, no. 6795. AAAS, 2026.","ista":"Springstein BL, Javoor M, Megrian D, Hajdu R, Hanke DM, Zens B, Weiss GL, Schur FK, Loose M. 2026. Repurposing of a DNA segregation machinery into a cytoskeletal system controlling cell shape. Science. 392(6795), eaea6343.","short":"B.L. Springstein, M. Javoor, D. Megrian, R. Hajdu, D.M. Hanke, B. Zens, G.L. Weiss, F.K. Schur, M. Loose, Science 392 (2026).","chicago":"Springstein, Benjamin L, Manjunath Javoor, Daniela Megrian, Roman Hajdu, Dustin M. Hanke, Bettina Zens, Gregor L. Weiss, Florian KM Schur, and Martin Loose. “Repurposing of a DNA Segregation Machinery into a Cytoskeletal System Controlling Cell Shape.” <i>Science</i>. AAAS, 2026. <a href=\"https://doi.org/10.1126/science.aea6343\">https://doi.org/10.1126/science.aea6343</a>.","ama":"Springstein BL, Javoor M, Megrian D, et al. Repurposing of a DNA segregation machinery into a cytoskeletal system controlling cell shape. <i>Science</i>. 2026;392(6795). doi:<a href=\"https://doi.org/10.1126/science.aea6343\">10.1126/science.aea6343</a>"},"doi":"10.1126/science.aea6343","article_processing_charge":"No","department":[{"_id":"MaLo"},{"_id":"FlSc"},{"_id":"GradSch"},{"_id":"EM-Fac"}],"corr_author":"1","project":[{"name":"IST-BRIDGE: International postdoctoral program","_id":"fc2ed2f7-9c52-11eb-aca3-c01059dda49c","call_identifier":"H2020","grant_number":"101034413"},{"name":"A molecular atlas of Actin filament IDentities in the cell motility machinery","_id":"bd980d18-d553-11ed-ba76-ceaa645c97eb","grant_number":"101076260"}],"article_number":"eaea6343","oa_version":"None","scopus_import":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","month":"04","language":[{"iso":"eng"}]},{"oa":1,"date_published":"2026-08-21T00:00:00Z","date_created":"2026-08-30T22:01:43Z","type":"journal_article","intvolume":"        17","PlanS_conform":"1","status":"public","researchdata_availability":"yes","year":"2026","publication":"Nature Communications","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"arxiv":1,"publication_status":"published","fulldoi":"https://doi.org/10.1038/s41467-026-75654-w","volume":17,"supplementarymaterial":"yes","quality_controlled":"1","file":[{"access_level":"open_access","date_created":"2026-09-09T07:25:19Z","file_name":"2026_NatureComm_Tuo.pdf","checksum":"3cfb714304eec29b97dcaf7fb86dd6e3","relation":"main_file","date_updated":"2026-09-09T07:25:19Z","file_id":"22864","content_type":"application/pdf","success":1,"file_size":1526298,"creator":"dernst"}],"OA_type":"gold","article_type":"original","pmid":1,"day":"21","author":[{"first_name":"Ping","full_name":"Tuo, Ping","id":"6e5644c0-c180-11ed-a2da-facc4c9f4f09","last_name":"Tuo"},{"last_name":"Chen","id":"4d0a9064-1ff6-11ee-9fa6-ec046c604785","orcid":"0000-0001-5337-5875","full_name":"Chen, Jiale","first_name":"Jiale"},{"first_name":"Ju","full_name":"Li, Ju","last_name":"Li"}],"das_tickbox":"1","OA_place":"publisher","title":"Flow matching for reaction pathway generation","acknowledgement":"P.T. thanks valued discussions with Dr. Peichen Zhong, Dr. Hao Tang, and Dr. Chengbin Zhao. P.T. thanks Dr. Dingshun Lv, Dr. Zechang Sun, and Dr. Chenxi Hu for identifying an important bug in an early version of the code package. The authors acknowledge the resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy Office of Science User Facility using NERSC award DOEERCAP0031751 ‘GenAI@NERSC’. P.T. acknowledges funding from the BIDMaP Postdoctoral Fellowship.","external_id":{"arxiv":["2507.10530"],"pmid":["42469237"]},"_id":"22771","publisher":"Springer Nature","ddc":["000"],"date_updated":"2026-09-09T07:28:15Z","has_accepted_license":"1","department":[{"_id":"DaAl"},{"_id":"GradSch"}],"citation":{"mla":"Tuo, Ping, et al. “Flow Matching for Reaction Pathway Generation.” <i>Nature Communications</i>, vol. 17, 8769, Springer Nature, 2026, doi:<a href=\"https://doi.org/10.1038/s41467-026-75654-w\">10.1038/s41467-026-75654-w</a>.","apa":"Tuo, P., Chen, J., &#38; Li, J. (2026). Flow matching for reaction pathway generation. <i>Nature Communications</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41467-026-75654-w\">https://doi.org/10.1038/s41467-026-75654-w</a>","short":"P. Tuo, J. Chen, J. Li, Nature Communications 17 (2026).","chicago":"Tuo, Ping, Jiale Chen, and Ju Li. “Flow Matching for Reaction Pathway Generation.” <i>Nature Communications</i>. Springer Nature, 2026. <a href=\"https://doi.org/10.1038/s41467-026-75654-w\">https://doi.org/10.1038/s41467-026-75654-w</a>.","ama":"Tuo P, Chen J, Li J. Flow matching for reaction pathway generation. <i>Nature Communications</i>. 2026;17. doi:<a href=\"https://doi.org/10.1038/s41467-026-75654-w\">10.1038/s41467-026-75654-w</a>","ieee":"P. Tuo, J. Chen, and J. Li, “Flow matching for reaction pathway generation,” <i>Nature Communications</i>, vol. 17. Springer Nature, 2026.","ista":"Tuo P, Chen J, Li J. 2026. Flow matching for reaction pathway generation. Nature Communications. 17, 8769."},"file_date_updated":"2026-09-09T07:25:19Z","doi":"10.1038/s41467-026-75654-w","abstract":[{"lang":"eng","text":"Elucidating reaction mechanisms requires efficient generation of transition states (TSs) and products. Existing diffusion and sequence-based models accelerate parts of this process over traditional string-based methods, but typically still require manual enumeration of either TSs or products, and stochastic diffusion dynamics can be inefficient and hard to control. We introduce MolGEN, a conditional flow-matching framework that uses deterministic optimal transport to map Gaussian priors to chemical distributions. For TS generation, MolGEN improves TS geometry and barrier-height prediction over diffusion models while enabling sub-second sampling. For reaction product generation, it achieves competitive top-k accuracy while preserving mass and electron balance. Using the same backbone for TS and product sampling, MolGEN enables template-free generative exploration of reaction networks without the repeated quantum-chemistry searches required by prior methods. For the γ-ketohydroperoxide decomposition network, it produces more valid TSs than string-based methods using only 12 quantum-chemistry evaluations instead of 1156, and identifies a lower-barrier pathway."}],"publication_identifier":{"eissn":["2041-1723"]},"DOAJ_listed":"1","article_processing_charge":"Yes","article_number":"8769","dataavailabilitystatement":"Structures generated in this study are provided in the Source Data file, and deposited in the GitHub repository https://github.com/tuoping/MolGEN and the figshare database under accession code https://doi.org/10.6084/m9.figshare.30576365. Source data are provided in this paper. The MolGEN codebase is available as an open-source repository for continuous development at https://github.com/tuoping/MolGEN. A release of the code used in this work has been archived on Zenodo47.","scopus_import":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","language":[{"iso":"eng"}],"month":"08","oa_version":"Published Version"},{"author":[{"full_name":"Ehrmann, Andreas","first_name":"Andreas","orcid":"0000-0002-0997-5678","last_name":"Ehrmann","id":"eaa689ed-f6e0-11ea-865d-bd98cbcf83c2"}],"doi_confirm":"1","day":"09","acknowledged_ssus":[{"_id":"ScienComp"}],"contributor":[{"id":"eaa689ed-f6e0-11ea-865d-bd98cbcf83c2","orcid":"0000-0002-0997-5678","last_name":"Ehrmann","contributor_type":"data_collector","first_name":"Andreas"}],"OA_place":"repository","license":"https://creativecommons.org/licenses/by-nc-sa/4.0/","file":[{"success":1,"content_type":"video/mp4","file_id":"22853","creator":"aehrmann","file_size":1513964,"file_name":"Supplemental video 1.mp4","access_level":"open_access","date_created":"2026-09-08T11:31:32Z","checksum":"966417b3eab49523068bb0dfba4ecc07","relation":"main_file","date_updated":"2026-09-08T11:31:32Z"},{"file_name":"Supplemental video 2.mp4","date_created":"2026-09-08T11:31:37Z","access_level":"open_access","date_updated":"2026-09-08T11:31:37Z","relation":"main_file","checksum":"deddcae30875bff8e59d5dc9ee3c196f","success":1,"content_type":"video/mp4","file_id":"22854","creator":"aehrmann","file_size":2634179},{"creator":"aehrmann","file_size":2080684,"success":1,"content_type":"video/mp4","file_id":"22855","checksum":"721446b7595edc670d877185637cf15c","relation":"main_file","date_updated":"2026-09-08T11:31:42Z","file_name":"Supplemental video 3.mp4","access_level":"open_access","date_created":"2026-09-08T11:31:42Z"},{"relation":"main_file","date_updated":"2026-09-08T11:31:48Z","checksum":"da44153821aa4f8f3cbc2860ef6d1bad","date_created":"2026-09-08T11:31:48Z","access_level":"open_access","file_name":"Supplemental video 4.mp4","file_size":4047831,"creator":"aehrmann","content_type":"video/mp4","file_id":"22856","success":1},{"content_type":"text/plain","file_id":"22860","success":1,"file_size":1122,"creator":"aehrmann","access_level":"open_access","date_created":"2026-09-08T18:36:14Z","file_name":"README.txt","checksum":"1e94cd067809e1a93e21676181b4c102","relation":"main_file","date_updated":"2026-09-08T18:36:14Z"}],"fulldoi":"https://doi.org/10.15479/AT-ISTA-22852","tmp":{"short":"CC BY-NC-SA (4.0)","image":"/images/cc_by_nc_sa.png","legal_code_url":"https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode","name":"Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)"},"date_created":"2026-09-08T11:32:53Z","date_published":"2026-09-09T00:00:00Z","oa":1,"year":"2026","status":"public","type":"research_data","user_id":"68b8ca59-c5b3-11ee-8790-cd641c68093d","month":"09","oa_version":"None","project":[{"grant_number":"PAT 8537123","name":"Functional bio-inspired nanomachines from sticky colloids","_id":"90a98bb5-16d5-11f0-9cad-9675f3f8015d"}],"keyword":["functional nanostructures","bistability","target behavior","transition pathway"],"corr_author":"1","department":[{"_id":"GradSch"},{"_id":"CaGo"},{"_id":"EdHa"}],"has_accepted_license":"1","article_processing_charge":"No","abstract":[{"lang":"eng","text":"This Research Data contains supplemental videos for Chapter 4 \"Designing bistable nanostructures for target behavior\" of my PhD Thesis \"Biological functionality without biochemistry: designing nanomachines for target behavior\".\r\nSupplemental video 1: Video showing the transition pathway of a bistable nanostructure with sphere-based arms, corresponding to the Machine in Scenario 4.\r\nSupplemental video 2: Video showing the transition pathway of the Source in Scenario 1. The arm tips change sides during the transition, demonstrating that the arms pass through each other.\r\nSupplemental video 3: Video showing the transition pathway of a fully polyhedral hinge structure with unconstrained arms. Note that we only show the ends of the arms.\r\nSupplemental video 4: Video showing the transition pathway of the coupled energy-delivery reaction of a Machine (gray) and a Source (blue) nanostructure for the optimized parameters in Scenario 3. Note that we only show the ends of the arms."}],"file_date_updated":"2026-09-08T18:36:14Z","doi":"10.15479/AT-ISTA-22852","citation":{"ama":"Ehrmann A. Supplemental videos for Designing bistable nanostructures for target behavior. 2026. doi:<a href=\"https://doi.org/10.15479/AT-ISTA-22852\">10.15479/AT-ISTA-22852</a>","chicago":"Ehrmann, Andreas. “Supplemental Videos for Designing Bistable Nanostructures for Target Behavior.” Institute of Science and Technology Austria, 2026. <a href=\"https://doi.org/10.15479/AT-ISTA-22852\">https://doi.org/10.15479/AT-ISTA-22852</a>.","short":"A. Ehrmann, (2026).","ista":"Ehrmann A. 2026. Supplemental videos for Designing bistable nanostructures for target behavior, Institute of Science and Technology Austria, <a href=\"https://doi.org/10.15479/AT-ISTA-22852\">10.15479/AT-ISTA-22852</a>.","ieee":"A. Ehrmann, “Supplemental videos for Designing bistable nanostructures for target behavior.” Institute of Science and Technology Austria, 2026.","apa":"Ehrmann, A. (2026). Supplemental videos for Designing bistable nanostructures for target behavior. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT-ISTA-22852\">https://doi.org/10.15479/AT-ISTA-22852</a>","mla":"Ehrmann, Andreas. <i>Supplemental Videos for Designing Bistable Nanostructures for Target Behavior</i>. Institute of Science and Technology Austria, 2026, doi:<a href=\"https://doi.org/10.15479/AT-ISTA-22852\">10.15479/AT-ISTA-22852</a>."},"title":"Supplemental videos for Designing bistable nanostructures for target behavior","date_updated":"2026-09-09T07:24:10Z","publisher":"Institute of Science and Technology Austria","_id":"22852"},{"date_created":"2026-08-30T22:01:44Z","date_published":"2026-09-09T00:00:00Z","oa":1,"researchdata_availability":"yes","year":"2026","status":"public","PlanS_conform":"1","intvolume":"        54","type":"journal_article","issue":"16","fulldoi":"https://doi.org/10.1093/nar/gkag845","publication_status":"published","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"publication":"Nucleic Acids Research","supplementarymaterial":"yes","volume":54,"pmid":1,"article_type":"original","OA_type":"gold","file":[{"date_updated":"2026-09-09T11:29:49Z","relation":"main_file","checksum":"319904a237f73dcc55daa4a56baa98fa","file_name":"2026_NucleicAcidsResearch_Varada.pdf","date_created":"2026-09-09T11:29:49Z","access_level":"open_access","creator":"dernst","file_size":6016116,"success":1,"content_type":"application/pdf","file_id":"22872"}],"quality_controlled":"1","author":[{"full_name":"Varada, Rajagopal","first_name":"Rajagopal","last_name":"Varada"},{"first_name":"Alina F.","full_name":"Leuchtenberger, Alina F.","last_name":"Leuchtenberger"},{"last_name":"Vesely","full_name":"Vesely, Cornelia","first_name":"Cornelia"},{"first_name":"Beata M","full_name":"Kaczmarek, Beata M","id":"36FA4AFA-F248-11E8-B48F-1D18A9856A87","last_name":"Kaczmarek"},{"first_name":"Hamid","full_name":"Mansouri Khosravi, Hamid","last_name":"Mansouri Khosravi"},{"full_name":"Mandl, Therese C.","first_name":"Therese C.","last_name":"Mandl"},{"first_name":"Katarina","full_name":"Milanovic, Katarina","last_name":"Milanovic"},{"full_name":"Honarmand Tamizkar, Kasra","first_name":"Kasra","last_name":"Honarmand Tamizkar"},{"last_name":"Rajendra","first_name":"Vinod","full_name":"Rajendra, Vinod"},{"last_name":"Senoner","first_name":"Hannes","full_name":"Senoner, Hannes"},{"last_name":"Steinbichl","full_name":"Steinbichl, Linda","first_name":"Linda"},{"last_name":"Borojevic","full_name":"Borojevic, Marija","first_name":"Marija"},{"last_name":"Sombke","full_name":"Sombke, Andy","first_name":"Andy"},{"first_name":"Katy","full_name":"Schmidt, Katy","last_name":"Schmidt"},{"last_name":"Eckhard","first_name":"Margret","full_name":"Eckhard, Margret"},{"full_name":"Hofacker, Ivo L.","first_name":"Ivo L.","last_name":"Hofacker"},{"first_name":"Carl","full_name":"Walkley, Carl","last_name":"Walkley"},{"last_name":"Heraud-Farlow","full_name":"Heraud-Farlow, Jacki E.","first_name":"Jacki E."},{"full_name":"Picardi, Ernesto","first_name":"Ernesto","last_name":"Picardi"},{"first_name":"Carrie A","full_name":"Bernecky, Carrie A","orcid":"0000-0003-0893-7036","last_name":"Bernecky","id":"2CB9DFE2-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Jantsch","full_name":"Jantsch, Michael F.","first_name":"Michael F."}],"day":"09","OA_place":"publisher","das_tickbox":"1","title":"Distinguishing self from non-self RNA by editing-specific inosine patterns","ddc":["570"],"date_updated":"2026-09-09T11:31:04Z","publisher":"Oxford University Press","_id":"22772","external_id":{"pmid":["42635125"]},"acknowledgement":"This work was supported by Austrian Science Fund project F80-07 to M.F.J., F80-03 to C.B., and ZK57-B28 to C.V.; National Health and Medical Research Council Australia (NHMRC; GNT2018098 to C.R.W.). The work was supported in part by the Victorian State Government Operational Infrastructure Support Scheme to St Vincent’s Institute and Hudson Institute of Medical Research. R.V. and A.L. were supported by Doc Fund/DOC32 of the Austrian Science Fund. Funding to pay the Open Access publication charges for this article was provided by Austrian Science Fund. For open access purposes, the author has applied a CC BY public copyright license to any author accepted manuscript version arising from this submission.","department":[{"_id":"CaBe"},{"_id":"GradSch"}],"has_accepted_license":"1","article_processing_charge":"Yes","DOAJ_listed":"1","publication_identifier":{"eissn":["1362-4962"]},"abstract":[{"text":"The cytoplasmic antiviral sensor MDA5 is activated by double-stranded RNAs. Endogenous double-stranded RNAs are modified by the A-to-I RNA-editing ADAR family to prevent activation of MDA5. In vivo, cytoplasmic ADAR1p150 is critically required to suppress MDA5 activation, yet the editing signature of all ADAR isoforms is strongly overlapping in mice. Further, it is not clear how A-to-I modifications in dsRNA prevent MDA5 activation. Here we show that 3′ UTRs harboring inverted repeats activate MDA5 in vitro and in cells. In vitro editing by either ADAR isoform leads to editing at overlapping hotspot regions and prevents MDA5 activation in vitro and in cells. Remarkably, only inosines introduced by RNA editing are capable of suppressing MDA5 activation, while replacing guanosines with inosines during in vitro transcription has no impact on MDA5 activation. A comparison of inosines introduced by ADAR1p150 in vitro, in cells, and in vivo suggests that a small number of A-to-I conversions may be critically required to suppress MDA5 activation. As those critical editing events are predominantly altering A:U basepairs into I:U wobble basepairs, we suggest that the helical distortion introduced by those wobble pairs may prevent MDA5 polymerization and thus downstream activation of the type I interferon response.","lang":"eng"}],"citation":{"ieee":"R. Varada <i>et al.</i>, “Distinguishing self from non-self RNA by editing-specific inosine patterns,” <i>Nucleic Acids Research</i>, vol. 54, no. 16. Oxford University Press, 2026.","ista":"Varada R, Leuchtenberger AF, Vesely C, Kaczmarek BM, Mansouri Khosravi H, Mandl TC, Milanovic K, Honarmand Tamizkar K, Rajendra V, Senoner H, Steinbichl L, Borojevic M, Sombke A, Schmidt K, Eckhard M, Hofacker IL, Walkley C, Heraud-Farlow JE, Picardi E, Bernecky C, Jantsch MF. 2026. Distinguishing self from non-self RNA by editing-specific inosine patterns. Nucleic Acids Research. 54(16), gkag845.","chicago":"Varada, Rajagopal, Alina F. Leuchtenberger, Cornelia Vesely, Beata M Kaczmarek, Hamid Mansouri Khosravi, Therese C. Mandl, Katarina Milanovic, et al. “Distinguishing Self from Non-Self RNA by Editing-Specific Inosine Patterns.” <i>Nucleic Acids Research</i>. Oxford University Press, 2026. <a href=\"https://doi.org/10.1093/nar/gkag845\">https://doi.org/10.1093/nar/gkag845</a>.","short":"R. Varada, A.F. Leuchtenberger, C. Vesely, B.M. Kaczmarek, H. Mansouri Khosravi, T.C. Mandl, K. Milanovic, K. Honarmand Tamizkar, V. Rajendra, H. Senoner, L. Steinbichl, M. Borojevic, A. Sombke, K. Schmidt, M. Eckhard, I.L. Hofacker, C. Walkley, J.E. Heraud-Farlow, E. Picardi, C. Bernecky, M.F. Jantsch, Nucleic Acids Research 54 (2026).","ama":"Varada R, Leuchtenberger AF, Vesely C, et al. Distinguishing self from non-self RNA by editing-specific inosine patterns. <i>Nucleic Acids Research</i>. 2026;54(16). doi:<a href=\"https://doi.org/10.1093/nar/gkag845\">10.1093/nar/gkag845</a>","mla":"Varada, Rajagopal, et al. “Distinguishing Self from Non-Self RNA by Editing-Specific Inosine Patterns.” <i>Nucleic Acids Research</i>, vol. 54, no. 16, gkag845, Oxford University Press, 2026, doi:<a href=\"https://doi.org/10.1093/nar/gkag845\">10.1093/nar/gkag845</a>.","apa":"Varada, R., Leuchtenberger, A. F., Vesely, C., Kaczmarek, B. M., Mansouri Khosravi, H., Mandl, T. C., … Jantsch, M. F. (2026). Distinguishing self from non-self RNA by editing-specific inosine patterns. <i>Nucleic Acids Research</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/nar/gkag845\">https://doi.org/10.1093/nar/gkag845</a>"},"doi":"10.1093/nar/gkag845","file_date_updated":"2026-09-09T11:29:49Z","dataavailabilitystatement":"Sequencing data has been deposited at GEO and is available under accession number GSE293616.\r\nEditing analysis of protected dsRNA is available in GitHub, https://github.com/BioinfoUNIBA/Mouse-dsRNA-mda5, and Zenodo, https://doi.org/10.5281/zenodo.17876716.","article_number":"gkag845","project":[{"grant_number":"F8003","name":"RNAdeco: decorating RNA for a purpose/ P03- Roles of A-to-I editing in dsRNA recognition","_id":"8dc144d4-16d5-11f0-9cad-9d9e86aea1f7"}],"month":"09","language":[{"iso":"eng"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","scopus_import":"1","oa_version":"Published Version"},{"supplementarymaterial":"yes","OA_type":"hybrid","article_type":"original","quality_controlled":"1","author":[{"full_name":"Davin, Andrea","first_name":"Andrea","last_name":"Davin"},{"full_name":"Charinti, Giousef Alexandros","first_name":"Giousef Alexandros","id":"7f7cc04c-074c-11ed-af92-eb16afd85c75","last_name":"Charinti"},{"first_name":"Caroline J","full_name":"Muller, Caroline J","last_name":"Muller","id":"f978ccb0-3f7f-11eb-b193-b0e2bd13182b","orcid":"0000-0001-5836-5350"},{"last_name":"Polesello","id":"74c777f4-32da-11ee-b498-874db0835561","first_name":"Andrea","full_name":"Polesello, Andrea"},{"first_name":"Claudia","full_name":"Pasquero, Claudia","last_name":"Pasquero"}],"day":"26","ec_funded":1,"OA_place":"publisher","das_tickbox":"1","date_created":"2026-09-06T22:01:57Z","oa":1,"date_published":"2026-08-26T00:00:00Z","status":"public","researchdata_availability":"upon request","year":"2026","type":"journal_article","publication_status":"epub_ahead","fulldoi":"https://doi.org/10.1002/qj.70280","publication":"Quarterly Journal of the Royal Meteorological Society","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"article_number":"e70280","dataavailabilitystatement":"The data that support the findings of this study are available from the corresponding author upon reasonable request.","project":[{"name":"Organization of CLoUdS, and implications of Tropical  cyclones and for the Energetics of the tropics, in current and waRming climate","_id":"629205d8-2b32-11ec-9570-e1356ff73576","call_identifier":"H2020","grant_number":"805041"}],"month":"08","language":[{"iso":"eng"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","scopus_import":"1","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1002/qj.70280"}],"oa_version":"Published Version","title":"Stratospheric influence on tropical cyclone evolution","publisher":"Wiley","_id":"22818","date_updated":"2026-09-09T12:43:30Z","ddc":["550"],"acknowledgement":"The authors thank Tom Beucler, Hamish Ramsay, and two anonymous reviewers for insightful comments and constructive feedback on earlier versions of this work.\r\n\r\nThis work is partially funded by the National Recovery and Resilience Plan project TeRABIT (Terabit network for Research and Academic Big data in Italy—IR0000022—PNRRMissione4—Componente2—Investim ento3.1—CUPI53C21000370006) in the frame of the European Union—NextGenerationEU funding. C. Muller gratefully acknowledges funding from the European Research Council (ERC) under the European Union's Horizon 2020 research and innovation program (Project CLUSTER, Grant 805041). This work is an outcome of the project MIUR—Dipartimenti di Eccellenza 2023–2027.\r\n\r\nThis work used resources of the Deutsches Klimarechenzentrum (DKRZ) granted by its Scientific Steering Committee (WLA) under project bb1153. Open access publishing facilitated by Universita degli Studi di Milano-Bicocca, as part of the Wiley - CRUI-CARE agreement.","has_accepted_license":"1","department":[{"_id":"CaMu"},{"_id":"GradSch"}],"article_processing_charge":"Yes (via OA deal)","doi":"10.1002/qj.70280","citation":{"apa":"Davin, A., Charinti, G. A., Muller, C. J., Polesello, A., &#38; Pasquero, C. (2026). Stratospheric influence on tropical cyclone evolution. <i>Quarterly Journal of the Royal Meteorological Society</i>. Wiley. <a href=\"https://doi.org/10.1002/qj.70280\">https://doi.org/10.1002/qj.70280</a>","mla":"Davin, Andrea, et al. “Stratospheric Influence on Tropical Cyclone Evolution.” <i>Quarterly Journal of the Royal Meteorological Society</i>, e70280, Wiley, 2026, doi:<a href=\"https://doi.org/10.1002/qj.70280\">10.1002/qj.70280</a>.","ista":"Davin A, Charinti GA, Muller CJ, Polesello A, Pasquero C. 2026. Stratospheric influence on tropical cyclone evolution. Quarterly Journal of the Royal Meteorological Society., e70280.","ieee":"A. Davin, G. A. Charinti, C. J. Muller, A. Polesello, and C. Pasquero, “Stratospheric influence on tropical cyclone evolution,” <i>Quarterly Journal of the Royal Meteorological Society</i>. Wiley, 2026.","ama":"Davin A, Charinti GA, Muller CJ, Polesello A, Pasquero C. Stratospheric influence on tropical cyclone evolution. <i>Quarterly Journal of the Royal Meteorological Society</i>. 2026. doi:<a href=\"https://doi.org/10.1002/qj.70280\">10.1002/qj.70280</a>","chicago":"Davin, Andrea, Giousef Alexandros Charinti, Caroline J Muller, Andrea Polesello, and Claudia Pasquero. “Stratospheric Influence on Tropical Cyclone Evolution.” <i>Quarterly Journal of the Royal Meteorological Society</i>. Wiley, 2026. <a href=\"https://doi.org/10.1002/qj.70280\">https://doi.org/10.1002/qj.70280</a>.","short":"A. Davin, G.A. Charinti, C.J. Muller, A. Polesello, C. Pasquero, Quarterly Journal of the Royal Meteorological Society (2026)."},"publication_identifier":{"eissn":["1477-870X"],"issn":["0035-9009"]},"abstract":[{"lang":"eng","text":"Physical processes at play in the genesis and evolution of tropical cyclones are conducive to the formation of warm cores at their centres. When the warm anomaly is particularly large in the upper troposphere, it is referred to as a high-level warm core. Previous works documented the generation of high-level warm cores as a consequence of stratospheric air intrusion into the troposphere induced by the upper-level dynamics of a tropical cyclone. However, little attention has been given to their effects on the storm's subsequent evolution. It has been suggested that the presence of a high-level warm core can have opposite effects on tropical cyclone intensity: both strengthening and weakening have been described as possible consequences of its formation. In this study, we examine the role of high-level warm cores in the intensification and dissipation processes of tropical cyclones, as reproduced in numerical models of different complexities, namely the model “System for Atmospheric Modeling” (SAM) run under idealized conditions and the model Nonhydrostatic ICosahedral Atmospheric Model run under realistic conditions following the DYnamics of the Atmospheric general circulation Modeled On Non-hydrostatic Domains summer protocol. Our results confirm the hypothesis of a stratospheric origin behind the formation of high-level warm cores. Their initial role is shown to be an enhancement of storm intensity, by a lowering of the hydrostatic sea-level pressure (HSLP) associated with the presence of warm air aloft. However, as the warm anomaly intensifies and extends to lower levels, it also increases static stability in the air column, with the consequence of inhibiting convection and ultimately contributing to cyclone dissipation. These findings suggest that high-level warm cores play a dual role in the tropical cyclone life cycle, providing a stabilizing mechanism that can limit cyclone strength and longevity."}]},{"oa_version":"Published Version","month":"05","language":[{"iso":"eng"}],"user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","project":[{"_id":"bdadfa0d-d553-11ed-ba76-fb85edbd456a","name":"Cavity Quantum Electro Optics: Microwave photonics with nonclassical states","grant_number":"101089099"},{"grant_number":"899354","call_identifier":"H2020","name":"Quantum Local Area Networks with Superconducting Qubits","_id":"9B868D20-BA93-11EA-9121-9846C619BF3A"},{"grant_number":"758053","call_identifier":"H2020","_id":"26336814-B435-11E9-9278-68D0E5697425","name":"A Fiber Optic Transceiver for Superconducting Qubits"},{"_id":"5b807754-ab3d-11f0-914f-ff8c34502cc9","name":"Integrated optical coupling for low loss electro-optic interconnects","grant_number":"101248662"},{"grant_number":"101187231","name":"Cavity-Integrated Electro-Optics: Measuring, Converting and Manipulating Microwaves with Light","_id":"91aaf765-16d5-11f0-9cad-a8e7e44cccb7"},{"grant_number":"F07105","_id":"bdb108fd-d553-11ed-ba76-83dc74a9864f","name":"QUANTUM INFORMATION SYSTEMS BEYOND CLASSICAL CAPABILITIES / P5- Integration of Superconducting Quantum Circuits"},{"_id":"bdb7cfc1-d553-11ed-ba76-d2eaab167738","name":"Open Superconducting Quantum Computers (OpenSuperQPlus)","grant_number":"101080139"},{"name":"NOMIS Fellowship Program","_id":"9B861AAC-BA93-11EA-9121-9846C619BF3A"}],"publication_identifier":{"issn":["2663-337X"]},"abstract":[{"text":"Atoms and photons, two things so different but yet so alike. The former, the building block of matter, something we learn about in school and imagine it as some tiny marbles encircled by other tinier marbles. The latter, an electromagnetic wave, a light particle or an excitation of the electromagnetic field. Quantum mechanics tells us about the properties of these two entities. And even if it sounds, looks and writes counter-intuitive, it has proven right for over a century now.\r\n\r\nIn this work, I elaborate on how we tested the laws of quantum mechanics and how we used them learn more about the tiny building blocks of nature and the fields they use to talk to each other. The atoms we use, are artificial. Superconducting qubits, small electrical circuits with quantized energy levels behave like electrons that transition between different orbitals in an atom. One of the qubits' advantages, is also a big disadvantage. We design the circuits' energy levels and fabricate them in a cleanroom. This allows for arbitrary spaced energy levels but in contrast to real atoms, prevents two superconducting qubits from being alike. Still, this qubit platform is one of the frontrunners for future quantum computing technology and testing fundamental physics due to their scalability.\r\n\r\nWe interface superconducting qubits, which operate in the GHz regime, with microwave photons. We use 3D aluminum cavities as mediators between qubits and photons. The cavities allow for non-destructive readout of the qubit state, they shield the qubits from noise at the qubit frequency and they give us an easy way to frequency-tune these joint systems.\r\n\r\nWe need to operate superconducting qubits and their cavities at millikelvin temperatures in dilution refrigerators. At higher temperatures, superconductivity suffers and even worse, the environment is filled with thermal noise photons. This poses a fundamental limitation on the scalability of superconducting qubit devices. Also connecting multiple devices in different fridges does not work over room temperature links because the microwave photons used for this purpose will be covered in noise and the quantum information they carry, will be unusable.\r\n\r\nInfrared photons do not suffer from this noise problem since there are close to zero thermal noise photons at their frequencies at room temperature. We cannot simply interface superconducting devices with optical photons due their frequency mismatch and the destructive effect of optical photons on superconductors. Therefore, we use microwave-to-optics transducers that allow to convert microwave photons into optical ones and vice-versa. The transducers that we use are macroscopic electro-optic transducers using the Pockels effect in a disk-shaped Lithium Niobate whispering gallery mode resonator. By using a strong optical pump, photons from the two frequency domains experience a beam-splitter interaction and get converted from one to the other.\r\n\r\nWe measure the generated optical photons using elaborate optical setups, optical heterodyning and single photon detectors to gain knowledge about the qubit state or the converted microwave photons. Bridging the microwave and the optical world allows us to take advantage of both of their strengths but it also requires deep knowledge about both of their working principles.\r\n\r\nIn this work, we describe two experiments that our group conducted to showcase the opportunities that arise from interfacing superconducting qubits with optical photons but also the pitfalls, one may encounter on the way.\r\n\r\nIn the first experiment, we managed to all-optically read out a superconducting qubit. We show that the assignment fidelity, the probability that a measurement of the qubit state matches the prepared state, is close to equal for all-optical, microwave-to-optics and conventional microwave readout. We show T1 and T2 measurements for all three readout types and give an analysis of the noise caused by the optics. Finally, we show that the infrared light does not affect the qubit performance in a negative way but that the heating it causes does. This is an important insight that we used in the next experiment.\r\n\r\nThe second experiment is the upconversion of itinerant single microwave photons to the optical domain. We show that we can generate single microwave photons from a qubit-cavity system. We upconvert these single photons, measure them with a single photon detector and reconstruct their shape. By conducting a single photon Rabi measurement, we show correlations between the microwave and the optical domain. And by thorough signal-to-noise measurements and noise analysis, we find that we can generate single infrared photons with high signal-to-noise ratio 5.1 and low transducer added noise (<0.012 quanta). We show that this measurement creates a path towards entanglement of a superconducting qubit and an optical photon and what parameters need to be improved to achieve it. Additionally, this experiment is a proof of principle for an on-demand infrared single photon source. More generally, it allows to link microwave quantum technology in general to the optical domain.","lang":"eng"}],"doi":"10.15479/AT-ISTA-21863","citation":{"short":"T. Werner, Interfacing Superconducting Qubits with Optical Photons, Institute of Science and Technology Austria, 2026.","chicago":"Werner, Thomas. “Interfacing Superconducting Qubits with Optical Photons.” Institute of Science and Technology Austria, 2026. <a href=\"https://doi.org/10.15479/AT-ISTA-21863\">https://doi.org/10.15479/AT-ISTA-21863</a>.","ama":"Werner T. Interfacing superconducting qubits with optical photons. 2026. doi:<a href=\"https://doi.org/10.15479/AT-ISTA-21863\">10.15479/AT-ISTA-21863</a>","ieee":"T. Werner, “Interfacing superconducting qubits with optical photons,” Institute of Science and Technology Austria, 2026.","ista":"Werner T. 2026. Interfacing superconducting qubits with optical photons. Institute of Science and Technology Austria.","mla":"Werner, Thomas. <i>Interfacing Superconducting Qubits with Optical Photons</i>. Institute of Science and Technology Austria, 2026, doi:<a href=\"https://doi.org/10.15479/AT-ISTA-21863\">10.15479/AT-ISTA-21863</a>.","apa":"Werner, T. (2026). <i>Interfacing superconducting qubits with optical photons</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT-ISTA-21863\">https://doi.org/10.15479/AT-ISTA-21863</a>"},"file_date_updated":"2026-05-15T15:54:06Z","article_processing_charge":"No","department":[{"_id":"GradSch"},{"_id":"JoFi"}],"has_accepted_license":"1","keyword":["Superconducting qubits","Quantum optics","Single photons and quantum effects","Nonlinear optics"],"alternative_title":["ISTA Thesis"],"corr_author":"1","acknowledgement":"The author of this work was supported by the European Research Council under grant no.\r\n101089099 (ERC CoG cQEO) and the European Union’s Horizon 2020 research and innovation\r\nprogram under grant no. 899354 (FETopen SuperQuLAN).\r\nThis work was also supported by the European Research Council under grant nos. 758053\r\n(ERC StG QUNNECT), 101248662 (ERC POC CoupledEOT), and the European Innovation\r\nCouncil no. 101187231 (PathfinderOpen CIELO). This research was funded in whole or in part\r\nby the Austrian Science Fund (FWF) [10.55776/F71]. For open access purposes, the author\r\nhas applied a CC BY public copyright license to any author accepted manuscript version arising\r\nfrom this submission.\r\niii\r\nMy co-authors in the works mentioned later acknowledge generous support from the ISTFELLOW program, the NOMIS-ISTA fellowship, the Horizon Europe Program HORIZONCL4-2022-QUANTUM-01-SGA via Project No. 101113946 OpenSuperQPlus100 and a DOC fellowship of the Austrian Academy of Sciences at IST Austria.\r\n","degree_awarded":"PhD","date_updated":"2026-09-14T07:08:54Z","ddc":["530","537","539"],"publisher":"Institute of Science and Technology Austria","_id":"21863","title":"Interfacing superconducting qubits with optical photons","page":"97","OA_place":"publisher","ec_funded":1,"day":"12","acknowledged_ssus":[{"_id":"M-Shop"},{"_id":"NanoFab"},{"_id":"LifeSc"},{"_id":"SSU"}],"author":[{"id":"1fcd8497-dba3-11ea-a45e-c6fbd715f7c7","orcid":"0009-0001-2346-5236","last_name":"Werner","first_name":"Thomas","full_name":"Werner, Thomas"}],"file":[{"content_type":"application/pdf","file_id":"21879","file_size":9330516,"creator":"twerner","date_created":"2026-05-15T15:53:57Z","access_level":"open_access","file_name":"2026_Werner_Thomas_Thesis.pdf","relation":"main_file","date_updated":"2026-05-15T15:53:57Z","checksum":"a5b4d8dba83f96e955a3625c0eebee98"},{"content_type":"application/x-zip-compressed","file_id":"21880","file_size":9370704,"creator":"twerner","access_level":"closed","date_created":"2026-05-15T15:54:06Z","file_name":"2026_Werner_Thomas_Thesis.zip","checksum":"b41282beaacfb32472769b9e3b1758d8","relation":"source_file","date_updated":"2026-05-15T15:54:06Z"}],"supervisor":[{"orcid":"0000-0001-8112-028X","id":"4B591CBA-F248-11E8-B48F-1D18A9856A87","last_name":"Fink","first_name":"Johannes M","full_name":"Fink, Johannes M"}],"tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"fulldoi":"https://doi.org/10.15479/AT-ISTA-21863","publication_status":"published","type":"dissertation","year":"2026","status":"public","related_material":{"record":[{"relation":"part_of_dissertation","status":"public","id":"19073"},{"status":"public","relation":"part_of_dissertation","id":"21870"}]},"date_published":"2026-05-12T00:00:00Z","oa":1,"date_created":"2026-05-12T09:04:02Z"},{"date_published":"2026-01-31T00:00:00Z","oa":1,"date_created":"2026-05-12T13:58:18Z","type":"preprint","year":"2026","status":"public","related_material":{"record":[{"status":"public","id":"21863","relation":"dissertation_contains"}]},"tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"publication":"arXiv","fulldoi":"https://doi.org/10.48550/arXiv.2602.00928","arxiv":1,"publication_status":"draft","OA_type":"green","day":"31","author":[{"orcid":"0009-0001-2346-5236","last_name":"Werner","id":"1fcd8497-dba3-11ea-a45e-c6fbd715f7c7","first_name":"Thomas","full_name":"Werner, Thomas"},{"last_name":"Riyazi","id":"53322f94-5355-11ee-ae5a-ff6f81c87d51","full_name":"Riyazi, Erfan","first_name":"Erfan"},{"orcid":"0000-0002-1965-4309","id":"221708e1-1ff6-11ee-9fa6-85146607433e","last_name":"Hawaldar","first_name":"Samarth","full_name":"Hawaldar, Samarth"},{"first_name":"Rishabh","full_name":"Sahu, Rishabh","orcid":"0000-0001-6264-2162","id":"47D26E34-F248-11E8-B48F-1D18A9856A87","last_name":"Sahu"},{"full_name":"Arnold, Georg M","first_name":"Georg M","last_name":"Arnold","id":"3770C838-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-1397-7876"},{"last_name":"Paul Falthansl-Scheinecker","full_name":"Paul Falthansl-Scheinecker, Paul Falthansl-Scheinecker","first_name":"Paul Falthansl-Scheinecker"},{"last_name":"Naranjo","first_name":"Jennifer A. Sánchez","full_name":"Naranjo, Jennifer A. Sánchez"},{"full_name":"Loi, Dante","first_name":"Dante","last_name":"Loi"},{"last_name":"Kapoor","first_name":"Lucky N.","full_name":"Kapoor, Lucky N."},{"full_name":"Zemlicka, Martin","first_name":"Martin","orcid":"0009-0005-0878-3032","last_name":"Zemlicka","id":"2DCF8DE6-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Qiu, Liu","first_name":"Liu","id":"45e99c0d-1eb1-11eb-9b96-ed8ab2983cac","last_name":"Qiu","orcid":"0000-0003-4345-4267"},{"first_name":"Andrei","full_name":"Militaru, Andrei","last_name":"Militaru","id":"d67706f8-8eb1-11ee-ad1b-9c30dfa19e0b"},{"orcid":"0000-0001-8112-028X","last_name":"Fink","id":"4B591CBA-F248-11E8-B48F-1D18A9856A87","full_name":"Fink, Johannes M","first_name":"Johannes M"}],"OA_place":"repository","ec_funded":1,"title":"Electro-optic conversion of itinerant Fock states","external_id":{"arxiv":["2602.00928"]},"acknowledgement":"We thank Fritz Diorico and Onur Hosten who suggested the filter cavity design, and gave important insights about the assembly and the testing of the FabryPerot filter cavities. Ekatrina Fedotova and Diego A.\r\nLancheros Naranjo worked on the filter cavity setup in\r\nthe early stages of this work. Gustavo Wiederhecker and\r\nYiewen Chu provided insights as to the origins of the\r\nobserved optical noise and Nicola Carlon Zambon suggested using telecom filters to mitigate it further. This\r\nwork was supported by the European Research Council under grant agreement no. 101089099 (ERC CoG\r\ncQEO), and 101248662 (ERC POC CoupledEOT), the\r\nEuropean Unions Horizon 2020 research and innovation\r\nprogram under grant agreement no. 899354 (FETopen\r\nSuperQuLAN), the European Innovation Council no.\r\n101187231 (PathfinderOpen CIELO), and the Austrian\r\nScience Fund (FWF) no. F7105 (SFB BeyondC). J.F.\r\nand L.K. acknowledge support from the Horizon Europe\r\nProgram HORIZON-CL4-2022-QUANTUM-01-SGA via\r\nProject No. 101113946 OpenSuperQPlus100. A.M. acknowledges support from the NOMIS-ISTA fellowship.","date_updated":"2026-09-14T07:08:55Z","_id":"21870","department":[{"_id":"JoFi"},{"_id":"GradSch"}],"corr_author":"1","abstract":[{"lang":"eng","text":"Superconducting qubits are a leading candidate for utility-scale quantum computing due to their fast gate speeds and steadily decreasing error rates. The requirement for millikelvin operating temperatures, however, creates a significant scaling bottleneck. Modular architectures using optical fiber links could bridge separate cryogenic nodes, but superconducting circuits do not have coherent optical transitions and microwave-to-optical conversion has not been shown for any non-classical photon state. In this work, we demonstrate the on-demand generation and tomographic reconstruction of itinerant single microwave photons at 8.9 GHz from a superconducting qubit. We upconvert this non-Gaussian state with a transducer added noise below 0.012 quanta and count the converted telecom photons at 193.4 THz with a signal-to-noise ratio of up to 5.1$\\pm$1.1. We characterize the trade-offs between throughput and noise, and establish a viable path toward heralded entanglement distribution and gate teleportation. Looking ahead, these results empower existing superconducting devices to take a key role in distributed quantum technologies and heterogeneous quantum systems."}],"doi":"10.48550/arXiv.2602.00928","citation":{"short":"T. Werner, E. Riyazi, S. Hawaldar, R. Sahu, G.M. Arnold, P.F.-S. Paul Falthansl-Scheinecker, J.A.S. Naranjo, D. Loi, L.N. Kapoor, M. Zemlicka, L. Qiu, A. Militaru, J.M. Fink, ArXiv (n.d.).","chicago":"Werner, Thomas, Erfan Riyazi, Samarth Hawaldar, Rishabh Sahu, Georg M Arnold, Paul Falthansl-Scheinecker Paul Falthansl-Scheinecker, Jennifer A. Sánchez Naranjo, et al. “Electro-Optic Conversion of Itinerant Fock States.” <i>ArXiv</i>, n.d. <a href=\"https://doi.org/10.48550/arXiv.2602.00928\">https://doi.org/10.48550/arXiv.2602.00928</a>.","ama":"Werner T, Riyazi E, Hawaldar S, et al. Electro-optic conversion of itinerant Fock states. <i>arXiv</i>. doi:<a href=\"https://doi.org/10.48550/arXiv.2602.00928\">10.48550/arXiv.2602.00928</a>","ieee":"T. Werner <i>et al.</i>, “Electro-optic conversion of itinerant Fock states,” <i>arXiv</i>. .","ista":"Werner T, Riyazi E, Hawaldar S, Sahu R, Arnold GM, Paul Falthansl-Scheinecker PF-S, Naranjo JAS, Loi D, Kapoor LN, Zemlicka M, Qiu L, Militaru A, Fink JM. Electro-optic conversion of itinerant Fock states. arXiv, <a href=\"https://doi.org/10.48550/arXiv.2602.00928\">10.48550/arXiv.2602.00928</a>.","mla":"Werner, Thomas, et al. “Electro-Optic Conversion of Itinerant Fock States.” <i>ArXiv</i>, doi:<a href=\"https://doi.org/10.48550/arXiv.2602.00928\">10.48550/arXiv.2602.00928</a>.","apa":"Werner, T., Riyazi, E., Hawaldar, S., Sahu, R., Arnold, G. M., Paul Falthansl-Scheinecker, P. F.-S., … Fink, J. M. (n.d.). Electro-optic conversion of itinerant Fock states. <i>arXiv</i>. <a href=\"https://doi.org/10.48550/arXiv.2602.00928\">https://doi.org/10.48550/arXiv.2602.00928</a>"},"article_processing_charge":"No","project":[{"name":"Cavity Quantum Electro Optics: Microwave photonics with nonclassical states","_id":"bdadfa0d-d553-11ed-ba76-fb85edbd456a","grant_number":"101089099"},{"_id":"5b807754-ab3d-11f0-914f-ff8c34502cc9","name":"Integrated optical coupling for low loss electro-optic interconnects","grant_number":"101248662"},{"grant_number":"899354","call_identifier":"H2020","name":"Quantum Local Area Networks with Superconducting Qubits","_id":"9B868D20-BA93-11EA-9121-9846C619BF3A"},{"grant_number":"101187231","_id":"91aaf765-16d5-11f0-9cad-a8e7e44cccb7","name":"Cavity-Integrated Electro-Optics: Measuring, Converting and Manipulating Microwaves with Light"},{"_id":"9B861AAC-BA93-11EA-9121-9846C619BF3A","name":"NOMIS Fellowship Program"},{"_id":"bdb108fd-d553-11ed-ba76-83dc74a9864f","name":"QUANTUM INFORMATION SYSTEMS BEYOND CLASSICAL CAPABILITIES / P5- Integration of Superconducting Quantum Circuits","grant_number":"F07105"}],"scopus_import":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","month":"01","language":[{"iso":"eng"}],"oa_version":"Preprint","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2602.00928"}]},{"corr_author":"1","alternative_title":["ISTA Thesis"],"has_accepted_license":"1","department":[{"_id":"CaBe"},{"_id":"GradSch"}],"article_processing_charge":"No","doi":"10.15479/AT-ISTA-22745","file_date_updated":"2026-08-26T08:46:35Z","citation":{"ieee":"D. Michalik, “Mechanistic insights into MDA5 selectivity and regulation,” Institute of Science and Technology Austria, 2026.","ista":"Michalik D. 2026. Mechanistic insights into MDA5 selectivity and regulation. Institute of Science and Technology Austria.","chicago":"Michalik, David. “Mechanistic Insights into MDA5 Selectivity and Regulation.” Institute of Science and Technology Austria, 2026. <a href=\"https://doi.org/10.15479/AT-ISTA-22745\">https://doi.org/10.15479/AT-ISTA-22745</a>.","short":"D. Michalik, Mechanistic Insights into MDA5 Selectivity and Regulation, Institute of Science and Technology Austria, 2026.","ama":"Michalik D. Mechanistic insights into MDA5 selectivity and regulation. 2026. doi:<a href=\"https://doi.org/10.15479/AT-ISTA-22745\">10.15479/AT-ISTA-22745</a>","mla":"Michalik, David. <i>Mechanistic Insights into MDA5 Selectivity and Regulation</i>. Institute of Science and Technology Austria, 2026, doi:<a href=\"https://doi.org/10.15479/AT-ISTA-22745\">10.15479/AT-ISTA-22745</a>.","apa":"Michalik, D. (2026). <i>Mechanistic insights into MDA5 selectivity and regulation</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT-ISTA-22745\">https://doi.org/10.15479/AT-ISTA-22745</a>"},"publication_identifier":{"issn":["2663-337X"]},"title":"Mechanistic insights into MDA5 selectivity and regulation","_id":"22745","publisher":"Institute of Science and Technology Austria","ddc":["572"],"date_updated":"2026-09-14T06:54:50Z","acknowledgement":"This research was supported by the Scientific Service Units of Institute of Science and\r\nTechnology Austria through resources provided by the Lab Support Facility and Electron\r\nMicroscopy Facility at ISTA. Monoclonal Antibody Facility at Max Perutz laboratories are\r\nacknowledged for raising anti-pSer1022 MDA5 antibody. Proteomics core facility CEITEC MUNI\r\nBrno, namely David Pospíšil, are acknowledged for their help with measuring MS data as well\r\nas help with interpreting them and the introduction into MS data analysis. CIISB, Instruct-CZ\r\nCentre of Instruct-ERIC EU consortium, funded by MEYS CR infrastructure project LM2023042,\r\nis gratefully acknowledged for the financial support of the measurements at the CEITEC\r\nProteomics Core Facility. Computational resources were provided by the e-INFRA CZ project\r\n(ID:90254), supported by MEYS CR.\r\nThis work was supported by the Austrian Science Fund (FWF) grant F8003-B RNA-DECO:\r\nDecorating RNA for a purpose (10.55776/F80).","degree_awarded":"PhD","language":[{"iso":"eng"}],"month":"08","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Published Version","project":[{"name":"RNAdeco: decorating RNA for a purpose/ P03- Roles of A-to-I editing in dsRNA recognition","_id":"8dc144d4-16d5-11f0-9cad-9d9e86aea1f7","grant_number":"F8003"}],"publication_status":"published","fulldoi":"https://doi.org/10.15479/AT-ISTA-22745","tmp":{"image":"/images/cc_by_sa.png","short":"CC BY-SA (4.0)","legal_code_url":"https://creativecommons.org/licenses/by-sa/4.0/legalcode","name":"Creative Commons Attribution-ShareAlike 4.0 International Public License (CC BY-SA 4.0)"},"date_created":"2026-08-21T09:29:34Z","date_published":"2026-08-21T00:00:00Z","year":"2026","status":"public","type":"dissertation","author":[{"full_name":"Michalik, David","first_name":"David","id":"B9577E20-AA38-11E9-AC9A-0930E6697425","last_name":"Michalik"}],"doi_confirm":"1","day":"21","OA_place":"publisher","license":"https://creativecommons.org/licenses/by-sa/4.0/","page":"182","supervisor":[{"full_name":"Bernecky, Carrie A","first_name":"Carrie A","last_name":"Bernecky","orcid":"0000-0003-0893-7036","id":"2CB9DFE2-F248-11E8-B48F-1D18A9856A87"}],"file":[{"file_size":13624837,"creator":"cchlebak","file_id":"22763","content_type":"application/pdf","date_updated":"2026-08-26T08:46:02Z","relation":"main_file","checksum":"cd80d2076a5155ab6a12ec0b05adbee5","embargo":"2027-08-26","date_created":"2026-08-26T08:46:02Z","access_level":"closed","embargo_to":"open_access","file_name":"2026_Michalik_David_Thesis.pdf"},{"file_id":"22764","content_type":"application/vnd.openxmlformats-officedocument.wordprocessingml.document","creator":"cchlebak","file_size":20499216,"file_name":"2026_Michalik_David_Thesis.docx","date_created":"2026-08-26T08:46:35Z","access_level":"closed","relation":"source_file","date_updated":"2026-08-26T08:46:35Z","checksum":"16ae6cd206ba0eb04ce8a7198042f24f"}]},{"volume":53,"supplementarymaterial":"yes","article_type":"original","OA_type":"gold","quality_controlled":"1","file":[{"success":1,"content_type":"application/pdf","file_id":"22931","creator":"dernst","file_size":1277378,"file_name":"2026_GeophysicalResearchLetters_Charinti.pdf","date_created":"2026-09-15T12:34:00Z","access_level":"open_access","relation":"main_file","date_updated":"2026-09-15T12:34:00Z","checksum":"8d1c470e4c2cb43bf3220f34a0d3e10c"}],"author":[{"first_name":"Giousef Alexandros","full_name":"Charinti, Giousef Alexandros","last_name":"Charinti","id":"7f7cc04c-074c-11ed-af92-eb16afd85c75"},{"last_name":"Davin","first_name":"Andrea","full_name":"Davin, Andrea"},{"first_name":"Andrea","full_name":"Polesello, Andrea","last_name":"Polesello","id":"74c777f4-32da-11ee-b498-874db0835561"},{"orcid":"0000-0001-5836-5350","last_name":"Muller","id":"f978ccb0-3f7f-11eb-b193-b0e2bd13182b","full_name":"Muller, Caroline J","first_name":"Caroline J"},{"full_name":"Pasquero, Claudia","first_name":"Claudia","last_name":"Pasquero"}],"day":"16","ec_funded":1,"OA_place":"publisher","das_tickbox":"1","date_created":"2026-09-13T22:01:51Z","oa":1,"date_published":"2026-09-16T00:00:00Z","intvolume":"        53","year":"2026","PlanS_conform":"1","researchdata_availability":"yes","status":"public","issue":"17","type":"journal_article","publication_status":"published","fulldoi":"https://doi.org/10.1029/2025GL121307","publication":"Geophysical Research Letters","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"article_number":"e2025GL121307","dataavailabilitystatement":"The post‐processed simulation data and the analysis scripts are available on Figshare https://doi.org/10.6084/m9.figshare.30933764 (Charinti et al., 2025).","project":[{"grant_number":"805041","name":"Organization of CLoUdS, and implications of Tropical  cyclones and for the Energetics of the tropics, in current and waRming climate","_id":"629205d8-2b32-11ec-9570-e1356ff73576","call_identifier":"H2020"}],"month":"09","language":[{"iso":"eng"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","scopus_import":"1","oa_version":"Published Version","title":"Impact of upper-level warming on tropical cyclone intensity","_id":"22912","publisher":"Wiley","date_updated":"2026-09-15T12:38:32Z","ddc":["550"],"acknowledgement":"GAC and CM acknowledge funding from the European Research Council (ERC)under the European Union's Horizon 2020 research and innovation program (Project CLUSTER, Grant Agreement No.805041). AD and CP acknowledge support by the National Recovery and Resilience Plan project TeRABIT (Terabit network for Research and Academic Big data in Italy—IR0000022—PNRR Missione 4,Componente 2, Investimento 3.1 CUPI53C21000370006) in the frame of the European Union ‐ NextGenerationEUfunding. Open Access funding provided by Institute of Science and TechnologyAustria/KEMÖ","corr_author":"1","has_accepted_license":"1","department":[{"_id":"CaMu"},{"_id":"GradSch"}],"article_processing_charge":"Yes","DOAJ_listed":"1","citation":{"ista":"Charinti GA, Davin A, Polesello A, Muller CJ, Pasquero C. 2026. Impact of upper-level warming on tropical cyclone intensity. Geophysical Research Letters. 53(17), e2025GL121307.","ieee":"G. A. Charinti, A. Davin, A. Polesello, C. J. Muller, and C. Pasquero, “Impact of upper-level warming on tropical cyclone intensity,” <i>Geophysical Research Letters</i>, vol. 53, no. 17. Wiley, 2026.","ama":"Charinti GA, Davin A, Polesello A, Muller CJ, Pasquero C. Impact of upper-level warming on tropical cyclone intensity. <i>Geophysical Research Letters</i>. 2026;53(17). doi:<a href=\"https://doi.org/10.1029/2025GL121307\">10.1029/2025GL121307</a>","chicago":"Charinti, Giousef Alexandros, Andrea Davin, Andrea Polesello, Caroline J Muller, and Claudia Pasquero. “Impact of Upper-Level Warming on Tropical Cyclone Intensity.” <i>Geophysical Research Letters</i>. Wiley, 2026. <a href=\"https://doi.org/10.1029/2025GL121307\">https://doi.org/10.1029/2025GL121307</a>.","short":"G.A. Charinti, A. Davin, A. Polesello, C.J. Muller, C. Pasquero, Geophysical Research Letters 53 (2026).","apa":"Charinti, G. A., Davin, A., Polesello, A., Muller, C. J., &#38; Pasquero, C. (2026). Impact of upper-level warming on tropical cyclone intensity. <i>Geophysical Research Letters</i>. Wiley. <a href=\"https://doi.org/10.1029/2025GL121307\">https://doi.org/10.1029/2025GL121307</a>","mla":"Charinti, Giousef Alexandros, et al. “Impact of Upper-Level Warming on Tropical Cyclone Intensity.” <i>Geophysical Research Letters</i>, vol. 53, no. 17, e2025GL121307, Wiley, 2026, doi:<a href=\"https://doi.org/10.1029/2025GL121307\">10.1029/2025GL121307</a>."},"file_date_updated":"2026-09-15T12:34:00Z","doi":"10.1029/2025GL121307","abstract":[{"text":"Deep convection from tropical cyclones (TCs) can reach the height of the tropopause and as such an interaction between the upper troposphere and lower stratosphere is likely to occur. Such interactions have been reported in both numerical and observational studies, mainly showing that subsidence from the stratosphere into the eye of an intensifying storm leads to a high-level warm core. However, the effect of this upper-level warming on the intensity of the TCs is not yet well understood. In this study, we show that subsiding air from the stratosphere beyond subsidence in the eye is the reason for the upper-level warming in idealized simulations. We further show that it is possible to quantify the effects of the upper-level warming on the potential intensity of the TC. Finally, we conclude that overshooting convection into the stratosphere causes the observed subsidence, as both become more pronounced with increasing sea-surface temperatures (SST).","lang":"eng"}],"publication_identifier":{"issn":["0094-8276"],"eissn":["1944-8007"]}},{"oa_version":"Preprint","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2505.04539","open_access":"1"}],"scopus_import":"1","month":"03","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","language":[{"iso":"eng"}],"project":[{"grant_number":"863818","_id":"0599E47C-7A3F-11EA-A408-12923DDC885E","name":"Formal Methods for Stochastic Models: Algorithms and Applications","call_identifier":"H2020"},{"name":"Bilateral Artificial Intelligence (Chatterjee)","_id":"4029cfc7-b034-11f1-9e55-88ab2ff3b6ee","grant_number":"COE12"}],"publication_identifier":{"eissn":["2374-3468"],"issn":["2159-5399"]},"abstract":[{"lang":"eng","text":"Robust Markov Decision Processes (RMDPs) generalize classical MDPs that consider uncertainties in transition probabilities by defining a set of possible transition functions. An objective is a set of runs (or infinite trajectories) of the RMDP, and the value for an objective is the maximal probability that the agent can guarantee against the adversarial environment. We consider (a) reachability objectives, where given a target set of states, the goal is to eventually arrive at one of them; and (b) parity objectives, which are a canonical representation for ω-regular objectives. The qualitative analysis problem asks whether the objective can be ensured with probability 1. In this work, we study the qualitative problem for reachability and parity objectives on RMDPs without making any assumption over the structures of the RMDPs, e.g., unichain or aperiodic. Our contributions are twofold. We first present efficient algorithms with oracle access to uncertainty sets that solve qualitative problems of reachability and parity objectives. We then report experimental results demonstrating the effectiveness of our oracle-based approach on classical RMDP examples from the literature scaling up to thousands of states."}],"citation":{"apa":"Asadi, A., Chatterjee, K., Goharshady, E., Karrabi, M., &#38; Shafiee, A. (2026). Qualitative analysis of ω-regular objectives on robust MDPs. In <i>Proceedings of the 40th AAAI Conference on Artificial Intelligence</i> (Vol. 40, pp. 36137–36145). Singapore, Singapore: Association for the Advancement of Artificial Intelligence. <a href=\"https://doi.org/10.1609/aaai.v40i43.40931\">https://doi.org/10.1609/aaai.v40i43.40931</a>","mla":"Asadi, Ali, et al. “Qualitative Analysis of ω-Regular Objectives on Robust MDPs.” <i>Proceedings of the 40th AAAI Conference on Artificial Intelligence</i>, vol. 40, no. 43, Association for the Advancement of Artificial Intelligence, 2026, pp. 36137–45, doi:<a href=\"https://doi.org/10.1609/aaai.v40i43.40931\">10.1609/aaai.v40i43.40931</a>.","ista":"Asadi A, Chatterjee K, Goharshady E, Karrabi M, Shafiee A. 2026. Qualitative analysis of ω-regular objectives on robust MDPs. Proceedings of the 40th AAAI Conference on Artificial Intelligence. AAAI: Conference on Artificial Intelligence vol. 40, 36137–36145.","ieee":"A. Asadi, K. Chatterjee, E. Goharshady, M. Karrabi, and A. Shafiee, “Qualitative analysis of ω-regular objectives on robust MDPs,” in <i>Proceedings of the 40th AAAI Conference on Artificial Intelligence</i>, Singapore, Singapore, 2026, vol. 40, no. 43, pp. 36137–36145.","ama":"Asadi A, Chatterjee K, Goharshady E, Karrabi M, Shafiee A. Qualitative analysis of ω-regular objectives on robust MDPs. In: <i>Proceedings of the 40th AAAI Conference on Artificial Intelligence</i>. Vol 40. Association for the Advancement of Artificial Intelligence; 2026:36137-36145. doi:<a href=\"https://doi.org/10.1609/aaai.v40i43.40931\">10.1609/aaai.v40i43.40931</a>","chicago":"Asadi, Ali, Krishnendu Chatterjee, Ehsan Goharshady, Mehrdad Karrabi, and Ali Shafiee. “Qualitative Analysis of ω-Regular Objectives on Robust MDPs.” In <i>Proceedings of the 40th AAAI Conference on Artificial Intelligence</i>, 40:36137–45. Association for the Advancement of Artificial Intelligence, 2026. <a href=\"https://doi.org/10.1609/aaai.v40i43.40931\">https://doi.org/10.1609/aaai.v40i43.40931</a>.","short":"A. Asadi, K. Chatterjee, E. Goharshady, M. Karrabi, A. Shafiee, in:, Proceedings of the 40th AAAI Conference on Artificial Intelligence, Association for the Advancement of Artificial Intelligence, 2026, pp. 36137–36145."},"doi":"10.1609/aaai.v40i43.40931","article_processing_charge":"No","department":[{"_id":"KrCh"},{"_id":"GradSch"}],"external_id":{"arxiv":["2505.04539"]},"acknowledgement":"This work was supported by ERC CoG 863818 (ForMSMArt) and Austrian Science Fund (FWF) 10.55776/COE12. We also thank Hossein Zakerinia for his helpful feedback.","date_updated":"2026-09-16T07:27:43Z","publisher":"Association for the Advancement of Artificial Intelligence","_id":"21717","title":"Qualitative analysis of ω-regular objectives on robust MDPs","page":"36137-36145","OA_place":"repository","ec_funded":1,"day":"14","author":[{"first_name":"Ali","full_name":"Asadi, Ali","last_name":"Asadi","id":"02d96aae-000e-11ec-b801-cadd0a5eefbb"},{"id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-4561-241X","last_name":"Chatterjee","first_name":"Krishnendu","full_name":"Chatterjee, Krishnendu"},{"orcid":"0000-0002-8595-0587","id":"103b4fa0-896a-11ed-bdf8-87b697bef40d","last_name":"Kafshdar Goharshadi","full_name":"Kafshdar Goharshadi, Ehsan","first_name":"Ehsan"},{"full_name":"Karrabi, Mehrdad","first_name":"Mehrdad","orcid":"0009-0007-5253-9170","id":"67638922-f394-11eb-9cf6-f20423e08757","last_name":"Karrabi"},{"id":"2783031a-7378-11f0-b2d0-f17f1db2ebad","last_name":"Shafiee","first_name":"Ali","full_name":"Shafiee, Ali"}],"quality_controlled":"1","OA_type":"green","volume":40,"publication":"Proceedings of the 40th AAAI Conference on Artificial Intelligence","fulldoi":"https://doi.org/10.1609/aaai.v40i43.40931","publication_status":"published","arxiv":1,"conference":{"start_date":"2026-01-20","name":"AAAI: Conference on Artificial Intelligence","end_date":"2026-01-27","location":"Singapore, Singapore"},"type":"conference","issue":"43","status":"public","year":"2026","intvolume":"        40","date_published":"2026-03-14T00:00:00Z","oa":1,"date_created":"2026-04-12T22:01:50Z"},{"project":[{"grant_number":"101019564","name":"The design and evaluation of modern fully dynamic data structures","_id":"bd9ca328-d553-11ed-ba76-dc4f890cfe62","call_identifier":"H2020"},{"_id":"d8f03aaa-b035-11f1-8588-d5147fa879e0","name":"Bilateral Artificial Intelligence (Lampert)","grant_number":"COE12"}],"article_number":"2:1-2:21","oa_version":"Published Version","scopus_import":"1","month":"06","language":[{"iso":"eng"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","external_id":{"arxiv":["2511.17994"]},"acknowledgement":"We thank Rasmus Pagh, Christoph Lampert and Jalaj Upadhyay for valuable\r\ncomments on an early draft. We thank Ryan Mckenna for a fruitful discussion on the experiment\r\ndesign. We thank Antti Honkela for sharing insights on learning rate scheduling and DP.\r\nNikita P. Kalinin: Funded in part by the Austrian Science Fund (FWF) [10.55776/COE12].\r\nJoel Daniel Andersson: Funded by the European Union. Views and opinions expressed are however\r\nthose of the author(s) only and do not necessarily reflect those of the European Union or the European\r\nResearch Council Executive Agency. Neither the European Union nor the granting authority can be\r\nheld responsible for them. This project has received funding from the European Research Council\r\n(ERC) under the European Union’s Horizon 2020 research and innovation programme (MoDynStruct,\r\nNo. 101019564). Additional funding by Providentia, a Data Science Distinguished Investigator grant\r\nfrom Novo Nordisk Fonden, with additional support from VILLUM Investigator grant 54451.\r\n","ddc":["000"],"date_updated":"2026-09-16T07:37:21Z","_id":"22146","publisher":"Schloss Dagstuhl - Leibniz-Zentrum für Informatik","title":"Learning rate scheduling with matrix factorization for private training","abstract":[{"text":"We study differentially private model training with stochastic gradient descent under learning rate scheduling and correlated noise. Although correlated noise, in particular via matrix factorizations, has been shown to improve accuracy, prior theoretical work focused primarily on the prefix-sum workload. That workload assumes a constant learning rate, whereas in practice learning rate schedules are widely used to accelerate training and improve convergence. We close this gap by deriving general upper and lower bounds for a broad class of learning rate schedules in both single- and multi-epoch settings. Building on these results, we propose a learning-rate-aware factorization that achieves improvements over prefix-sum factorizations under both MaxSE and MeanSE error metrics. Our theoretical analysis yields memory-efficient constructions suitable for practical deployment, and experiments on CIFAR-10 and IMDB datasets confirm that schedule-aware factorizations improve accuracy in private training.","lang":"eng"}],"publication_identifier":{"eissn":["1868-8969"],"isbn":["9783959774192"]},"file_date_updated":"2026-06-29T06:55:23Z","doi":"10.4230/LIPIcs.FORC.2026.2","citation":{"apa":"Kalinin, N., &#38; Andersson, J. D. (2026). Learning rate scheduling with matrix factorization for private training. In <i>7th Symposium on Foundations of Responsible Computing</i> (Vol. 368). Cambridge, MA; United States: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href=\"https://doi.org/10.4230/LIPIcs.FORC.2026.2\">https://doi.org/10.4230/LIPIcs.FORC.2026.2</a>","mla":"Kalinin, Nikita, and Joel D. Andersson. “Learning Rate Scheduling with Matrix Factorization for Private Training.” <i>7th Symposium on Foundations of Responsible Computing</i>, vol. 368, 2:1-2:21, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2026, doi:<a href=\"https://doi.org/10.4230/LIPIcs.FORC.2026.2\">10.4230/LIPIcs.FORC.2026.2</a>.","ista":"Kalinin N, Andersson JD. 2026. Learning rate scheduling with matrix factorization for private training. 7th Symposium on Foundations of Responsible Computing. FORC: Symposium on Foundations of Responsible Computing, LIPIcs, vol. 368, 2:1-2:21.","ieee":"N. Kalinin and J. D. Andersson, “Learning rate scheduling with matrix factorization for private training,” in <i>7th Symposium on Foundations of Responsible Computing</i>, Cambridge, MA; United States, 2026, vol. 368.","ama":"Kalinin N, Andersson JD. Learning rate scheduling with matrix factorization for private training. In: <i>7th Symposium on Foundations of Responsible Computing</i>. Vol 368. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2026. doi:<a href=\"https://doi.org/10.4230/LIPIcs.FORC.2026.2\">10.4230/LIPIcs.FORC.2026.2</a>","chicago":"Kalinin, Nikita, and Joel D Andersson. “Learning Rate Scheduling with Matrix Factorization for Private Training.” In <i>7th Symposium on Foundations of Responsible Computing</i>, Vol. 368. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2026. <a href=\"https://doi.org/10.4230/LIPIcs.FORC.2026.2\">https://doi.org/10.4230/LIPIcs.FORC.2026.2</a>.","short":"N. Kalinin, J.D. Andersson, in:, 7th Symposium on Foundations of Responsible Computing, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2026."},"article_processing_charge":"No","department":[{"_id":"ChLa"},{"_id":"GradSch"},{"_id":"MoHe"}],"has_accepted_license":"1","keyword":["differential privacy","machine learning","matrix factorization"],"corr_author":"1","alternative_title":["LIPIcs"],"file":[{"date_created":"2026-06-29T06:55:23Z","access_level":"open_access","file_name":"2026_LIPIcsFORC_Kalinin.pdf","date_updated":"2026-06-29T06:55:23Z","relation":"main_file","checksum":"c661f016d3861a1c1b590b87a744d087","content_type":"application/pdf","file_id":"22149","success":1,"file_size":1231914,"creator":"dernst"}],"quality_controlled":"1","OA_type":"gold","supplementarymaterial":"no","volume":368,"das_tickbox":"0","OA_place":"publisher","ec_funded":1,"day":"01","author":[{"full_name":"Kalinin, Nikita","first_name":"Nikita","last_name":"Kalinin","id":"4b14526e-14d2-11ed-ba64-c14c9553d137"},{"first_name":"Joel D","full_name":"Andersson, Joel D","last_name":"Andersson","id":"4a893819-d954-11f0-89b1-e360bad9ccc5"}],"type":"conference","year":"2026","status":"public","researchdata_availability":"no","intvolume":"       368","date_published":"2026-06-01T00:00:00Z","oa":1,"date_created":"2026-06-28T22:01:34Z","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"publication":"7th Symposium on Foundations of Responsible Computing","fulldoi":"https://doi.org/10.4230/LIPIcs.FORC.2026.2","arxiv":1,"publication_status":"published","conference":{"location":"Cambridge, MA; United States","start_date":"2026-06-03","name":"FORC: Symposium on Foundations of Responsible Computing","end_date":"2026-06-05"}}]