[{"date_created":"2024-05-12T22:01:01Z","year":"2024","article_number":"114195","doi":"10.1016/j.celrep.2024.114195","publication_identifier":{"eissn":["2211-1247"]},"issue":"5","publication":"Cell Reports","corr_author":"1","file":[{"checksum":"a06bb85be4fc765c51554d27ee2da802","relation":"main_file","access_level":"open_access","date_updated":"2024-05-13T12:11:22Z","file_size":5698598,"file_id":"15387","creator":"dernst","success":1,"date_created":"2024-05-13T12:11:22Z","file_name":"2024_CellReports_Adamowski.pdf","content_type":"application/pdf"}],"quality_controlled":"1","has_accepted_license":"1","ddc":["580"],"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","author":[{"id":"45F536D2-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-6463-5257","full_name":"Adamowski, Maciek","last_name":"Adamowski","first_name":"Maciek"},{"id":"6ac4636d-15b2-11ec-abd3-fb8df79972ae","full_name":"Randuch, Marek","first_name":"Marek","last_name":"Randuch"},{"last_name":"Matijevic","first_name":"Ivana","full_name":"Matijevic, Ivana","id":"83c17ce3-15b2-11ec-abd3-f486545870bd"},{"full_name":"Narasimhan, Madhumitha","orcid":"0000-0002-8600-0671","id":"44BF24D0-F248-11E8-B48F-1D18A9856A87","first_name":"Madhumitha","last_name":"Narasimhan"},{"orcid":"0000-0002-8302-7596","id":"4159519E-F248-11E8-B48F-1D18A9856A87","full_name":"Friml, Jiří","last_name":"Friml","first_name":"Jiří"}],"volume":43,"pmid":1,"license":"https://creativecommons.org/licenses/by/4.0/","article_processing_charge":"Yes","external_id":{"pmid":["38717900"],"isi":["001240362800001"]},"publication_status":"published","abstract":[{"lang":"eng","text":"Clathrin-mediated endocytosis (CME) is an essential process of cargo uptake operating in all eukaryotes. In animals and yeast, BAR-SH3 domain proteins, endophilins and amphiphysins, function at the conclusion of CME to recruit factors for vesicle scission and uncoating. Arabidopsis thaliana contains the BAR-SH3 domain proteins SH3P1–SH3P3, but their role is poorly understood. Here, we identify SH3Ps as functional homologs of endophilin/amphiphysin. SH3P1–SH3P3 bind to discrete foci at the plasma membrane (PM), and SH3P2 recruits late to a subset of clathrin-coated pits. The SH3P2 PM recruitment pattern is nearly identical to its interactor, a putative uncoating factor, AUXILIN-LIKE1. Notably, SH3P1–SH3P3 are required for most of AUXILIN-LIKE1 recruitment to the PM. This indicates a plant-specific modification of CME, where BAR-SH3 proteins recruit auxilin-like uncoating factors rather than the uncoating phosphatases, synaptojanins. SH3P1–SH3P3 act redundantly in overall CME with the plant-specific endocytic adaptor TPLATE complex but not due to an SH3 domain in its TASH3 subunit."}],"title":"SH3Ps recruit auxilin-like vesicle uncoating factors for clathrin-mediated endocytosis","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"day":"28","status":"public","citation":{"mla":"Adamowski, Maciek, et al. “SH3Ps Recruit Auxilin-like Vesicle Uncoating Factors for Clathrin-Mediated Endocytosis.” <i>Cell Reports</i>, vol. 43, no. 5, 114195, Cell Press, 2024, doi:<a href=\"https://doi.org/10.1016/j.celrep.2024.114195\">10.1016/j.celrep.2024.114195</a>.","chicago":"Adamowski, Maciek, Marek Randuch, Ivana Matijevic, Madhumitha Narasimhan, and Jiří Friml. “SH3Ps Recruit Auxilin-like Vesicle Uncoating Factors for Clathrin-Mediated Endocytosis.” <i>Cell Reports</i>. Cell Press, 2024. <a href=\"https://doi.org/10.1016/j.celrep.2024.114195\">https://doi.org/10.1016/j.celrep.2024.114195</a>.","apa":"Adamowski, M., Randuch, M., Matijevic, I., Narasimhan, M., &#38; Friml, J. (2024). SH3Ps recruit auxilin-like vesicle uncoating factors for clathrin-mediated endocytosis. <i>Cell Reports</i>. Cell Press. <a href=\"https://doi.org/10.1016/j.celrep.2024.114195\">https://doi.org/10.1016/j.celrep.2024.114195</a>","ama":"Adamowski M, Randuch M, Matijevic I, Narasimhan M, Friml J. SH3Ps recruit auxilin-like vesicle uncoating factors for clathrin-mediated endocytosis. <i>Cell Reports</i>. 2024;43(5). doi:<a href=\"https://doi.org/10.1016/j.celrep.2024.114195\">10.1016/j.celrep.2024.114195</a>","ista":"Adamowski M, Randuch M, Matijevic I, Narasimhan M, Friml J. 2024. SH3Ps recruit auxilin-like vesicle uncoating factors for clathrin-mediated endocytosis. Cell Reports. 43(5), 114195.","ieee":"M. Adamowski, M. Randuch, I. Matijevic, M. Narasimhan, and J. Friml, “SH3Ps recruit auxilin-like vesicle uncoating factors for clathrin-mediated endocytosis,” <i>Cell Reports</i>, vol. 43, no. 5. Cell Press, 2024.","short":"M. Adamowski, M. Randuch, I. Matijevic, M. Narasimhan, J. Friml, Cell Reports 43 (2024)."},"project":[{"_id":"26538374-B435-11E9-9278-68D0E5697425","grant_number":"I03630","call_identifier":"FWF","name":"Molecular mechanisms of endocytic cargo recognition in plants"}],"oa_version":"Published Version","intvolume":"        43","article_type":"original","type":"journal_article","acknowledgement":"The authors wish to acknowledge Dr. Daniel van Damme for mRuby3/pDONRP2rP3 and Prof. Qi-Jun Chen for sharing plasmids used for CRISPR-Cas9 mutagenesis. This work was supported by the Austrian Science Fund (FWF): I 3630-B25.","scopus_import":"1","_id":"15374","isi":1,"file_date_updated":"2024-05-13T12:11:22Z","oa":1,"date_published":"2024-05-28T00:00:00Z","month":"05","language":[{"iso":"eng"}],"date_updated":"2025-09-08T07:23:07Z","department":[{"_id":"JiFr"},{"_id":"MaLo"}],"publisher":"Cell Press"},{"citation":{"ama":"He S, Yu Y, Wang L, et al. Linker histone H1 drives heterochromatin condensation via phase separation in Arabidopsis. <i>The Plant Cell</i>. 2024;36(5):1829-1843. doi:<a href=\"https://doi.org/10.1093/plcell/koae034\">10.1093/plcell/koae034</a>","ista":"He S, Yu Y, Wang L, Zhang J, Bai Z, Li G, Li P, Feng X. 2024. Linker histone H1 drives heterochromatin condensation via phase separation in Arabidopsis. The Plant Cell. 36(5), 1829–1843.","ieee":"S. He <i>et al.</i>, “Linker histone H1 drives heterochromatin condensation via phase separation in Arabidopsis,” <i>The Plant Cell</i>, vol. 36, no. 5. Oxford University Press, pp. 1829–1843, 2024.","short":"S. He, Y. Yu, L. Wang, J. Zhang, Z. Bai, G. Li, P. Li, X. Feng, The Plant Cell 36 (2024) 1829–1843.","mla":"He, Shengbo, et al. “Linker Histone H1 Drives Heterochromatin Condensation via Phase Separation in Arabidopsis.” <i>The Plant Cell</i>, vol. 36, no. 5, Oxford University Press, 2024, pp. 1829–43, doi:<a href=\"https://doi.org/10.1093/plcell/koae034\">10.1093/plcell/koae034</a>.","chicago":"He, Shengbo, Yiming Yu, Liang Wang, Jingyi Zhang, Zhengyong Bai, Guohong Li, Pilong Li, and Xiaoqi Feng. “Linker Histone H1 Drives Heterochromatin Condensation via Phase Separation in Arabidopsis.” <i>The Plant Cell</i>. Oxford University Press, 2024. <a href=\"https://doi.org/10.1093/plcell/koae034\">https://doi.org/10.1093/plcell/koae034</a>.","apa":"He, S., Yu, Y., Wang, L., Zhang, J., Bai, Z., Li, G., … Feng, X. (2024). Linker histone H1 drives heterochromatin condensation via phase separation in Arabidopsis. <i>The Plant Cell</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/plcell/koae034\">https://doi.org/10.1093/plcell/koae034</a>"},"day":"01","status":"public","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"OA_type":"hybrid","date_updated":"2025-09-08T07:21:17Z","publisher":"Oxford University Press","department":[{"_id":"XiFe"}],"date_published":"2024-05-01T00:00:00Z","language":[{"iso":"eng"}],"month":"05","file_date_updated":"2025-04-23T07:43:12Z","oa":1,"isi":1,"scopus_import":"1","_id":"15375","type":"journal_article","acknowledgement":"This work was funded by ISTA core support (Y.Y. and X.F.) and grants from the National Natural Science Foundation of China (31871443 to L.W. and P.L.; 32100417 to L.W.).\r\nWe thank the ISTA Imaging and Optics Facility for assistance with microscopy and the ISTA Scientific Computing Facility for high-performance computing resources.","oa_version":"Published Version","intvolume":"        36","article_type":"original","ddc":["580"],"has_accepted_license":"1","file":[{"date_created":"2025-04-23T07:43:12Z","content_type":"application/pdf","file_name":"2024_PlantCell_He.pdf","creator":"dernst","success":1,"file_id":"19611","relation":"main_file","checksum":"eed76c848fe3d8fe9a53943181aaa53c","access_level":"open_access","file_size":50791962,"date_updated":"2025-04-23T07:43:12Z"}],"quality_controlled":"1","corr_author":"1","publication":"The Plant Cell","publication_identifier":{"eissn":["1532-298X"]},"doi":"10.1093/plcell/koae034","issue":"5","date_created":"2024-05-12T22:01:01Z","year":"2024","title":"Linker histone H1 drives heterochromatin condensation via phase separation in Arabidopsis","external_id":{"isi":["001180817000001"],"pmid":["38309957"]},"publication_status":"published","abstract":[{"text":"In the eukaryotic nucleus, heterochromatin forms highly condensed, visible foci known as heterochromatin foci (HF). These HF are enriched with linker histone H1, a key player in heterochromatin condensation and silencing. However, it is unknown how H1 aggregates HF and condenses heterochromatin. In this study, we established that H1 facilitates heterochromatin condensation by enhancing inter- and intrachromosomal interactions between and within heterochromatic regions of the Arabidopsis (Arabidopsis thaliana) genome. We demonstrated that H1 drives HF formation via phase separation, which requires its C-terminal intrinsically disordered region (C-IDR). A truncated H1 lacking the C-IDR fails to form foci or recover HF in the h1 mutant background, whereas C-IDR with a short stretch of the globular domain (18 out of 71 amino acids) is sufficient to rescue both defects. In addition, C-IDR is essential for H1's roles in regulating nucleosome repeat length and DNA methylation in Arabidopsis, indicating that phase separation capability is required for chromatin functions of H1. Our data suggest that bacterial H1-like proteins, which have been shown to condense DNA, are intrinsically disordered and capable of mediating phase separation. Therefore, we propose that phase separation mediated by H1 or H1-like proteins may represent an ancient mechanism for condensing chromatin and DNA.","lang":"eng"}],"article_processing_charge":"Yes (via OA deal)","page":"1829-1843","pmid":1,"acknowledged_ssus":[{"_id":"Bio"},{"_id":"ScienComp"}],"volume":36,"OA_place":"publisher","author":[{"full_name":"He, Shengbo","first_name":"Shengbo","last_name":"He"},{"first_name":"Yiming","last_name":"Yu","id":"318e643b-8b61-11ed-b69e-aafa103ec8dd","full_name":"Yu, Yiming"},{"first_name":"Liang","last_name":"Wang","full_name":"Wang, Liang"},{"last_name":"Zhang","first_name":"Jingyi","full_name":"Zhang, Jingyi"},{"full_name":"Bai, Zhengyong","last_name":"Bai","first_name":"Zhengyong"},{"last_name":"Li","first_name":"Guohong","full_name":"Li, Guohong"},{"last_name":"Li","first_name":"Pilong","full_name":"Li, Pilong"},{"last_name":"Feng","first_name":"Xiaoqi","full_name":"Feng, Xiaoqi","orcid":"0000-0002-4008-1234","id":"e0164712-22ee-11ed-b12a-d80fcdf35958"}],"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345"},{"oa_version":"Published Version","intvolume":"     14572","type":"conference","acknowledgement":"This work was supported in part by the ERC project ERC-2020-AdG 101020093 and by ISF grant no. 1679/21.","scopus_import":"1","_id":"15376","isi":1,"file_date_updated":"2024-05-22T07:09:24Z","oa":1,"date_published":"2024-04-05T00:00:00Z","language":[{"iso":"eng"}],"month":"04","date_updated":"2025-09-08T07:33:43Z","department":[{"_id":"ToHe"}],"arxiv":1,"publisher":"Springer Nature","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"ec_funded":1,"alternative_title":["LNCS"],"day":"05","status":"public","citation":{"short":"G. Avni, K. Mallik, S. Sadhukhan, in:, 30th International Conference on Tools and Algorithms for the Construction and Analysis of Systems, Springer Nature, 2024, pp. 153–172.","ieee":"G. Avni, K. Mallik, and S. Sadhukhan, “Auction-based scheduling,” in <i>30th International Conference on Tools and Algorithms for the Construction and Analysis of Systems</i>, Luxembourg City, Luxembourg, 2024, vol. 14572, pp. 153–172.","ista":"Avni G, Mallik K, Sadhukhan S. 2024. Auction-based scheduling. 30th International Conference on Tools and Algorithms for the Construction and Analysis of Systems. TACAS: Tools and Algorithms for the Construction and Analysis of Systems, LNCS, vol. 14572, 153–172.","ama":"Avni G, Mallik K, Sadhukhan S. Auction-based scheduling. In: <i>30th International Conference on Tools and Algorithms for the Construction and Analysis of Systems</i>. Vol 14572. Springer Nature; 2024:153-172. doi:<a href=\"https://doi.org/10.1007/978-3-031-57256-2_8\">10.1007/978-3-031-57256-2_8</a>","chicago":"Avni, Guy, Kaushik Mallik, and Suman Sadhukhan. “Auction-Based Scheduling.” In <i>30th International Conference on Tools and Algorithms for the Construction and Analysis of Systems</i>, 14572:153–72. Springer Nature, 2024. <a href=\"https://doi.org/10.1007/978-3-031-57256-2_8\">https://doi.org/10.1007/978-3-031-57256-2_8</a>.","apa":"Avni, G., Mallik, K., &#38; Sadhukhan, S. (2024). Auction-based scheduling. In <i>30th International Conference on Tools and Algorithms for the Construction and Analysis of Systems</i> (Vol. 14572, pp. 153–172). Luxembourg City, Luxembourg: Springer Nature. <a href=\"https://doi.org/10.1007/978-3-031-57256-2_8\">https://doi.org/10.1007/978-3-031-57256-2_8</a>","mla":"Avni, Guy, et al. “Auction-Based Scheduling.” <i>30th International Conference on Tools and Algorithms for the Construction and Analysis of Systems</i>, vol. 14572, Springer Nature, 2024, pp. 153–72, doi:<a href=\"https://doi.org/10.1007/978-3-031-57256-2_8\">10.1007/978-3-031-57256-2_8</a>."},"project":[{"grant_number":"101020093","_id":"62781420-2b32-11ec-9570-8d9b63373d4d","name":"Vigilant Algorithmic Monitoring of Software","call_identifier":"H2020"}],"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","author":[{"id":"463C8BC2-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-5588-8287","full_name":"Avni, Guy","last_name":"Avni","first_name":"Guy"},{"id":"0834ff3c-6d72-11ec-94e0-b5b0a4fb8598","orcid":"0000-0001-9864-7475","full_name":"Mallik, Kaushik","first_name":"Kaushik","last_name":"Mallik"},{"full_name":"Sadhukhan, Suman","last_name":"Sadhukhan","first_name":"Suman"}],"volume":14572,"article_processing_charge":"Yes (in subscription journal)","page":"153-172","publication_status":"published","external_id":{"isi":["001284187100008"],"arxiv":["2310.11798"]},"abstract":[{"lang":"eng","text":"Sequential decision-making tasks often require satisfaction of multiple, partially-contradictory objectives. Existing approaches are monolithic, where a single policy fulfills all objectives. We present auction-based scheduling, a decentralized framework for multi-objective sequential decision making. Each objective is fulfilled using a separate and independent policy. Composition of policies is performed at runtime, where at each step, the policies simultaneously bid from pre-allocated budgets for the privilege of choosing the next action. The framework allows policies to be independently created, modified, and replaced. We study path planning problems on finite graphs with two temporal objectives and present algorithms to synthesize policies together with bidding policies in a decentralized manner. We consider three categories of decentralized synthesis problems, parameterized by the assumptions that the policies make on each other. We identify a class of assumptions called assume-admissible for which synthesis is always possible for graphs whose every vertex has at most two outgoing edges."}],"title":"Auction-based scheduling","date_created":"2024-05-12T22:01:02Z","year":"2024","doi":"10.1007/978-3-031-57256-2_8","publication_identifier":{"eissn":["1611-3349"],"issn":["0302-9743"],"isbn":["9783031572555"]},"publication":"30th International Conference on Tools and Algorithms for the Construction and Analysis of Systems","corr_author":"1","file":[{"success":1,"creator":"dernst","date_created":"2024-05-22T07:09:24Z","content_type":"application/pdf","file_name":"2024_LNCS_Avni.pdf","access_level":"open_access","relation":"main_file","checksum":"dbeb123510997886d11925aedbf9c400","date_updated":"2024-05-22T07:09:24Z","file_size":508191,"file_id":"15414"}],"quality_controlled":"1","has_accepted_license":"1","ddc":["000"],"conference":{"start_date":"2024-04-06","name":"TACAS: Tools and Algorithms for the Construction and Analysis of Systems","end_date":"2024-04-11","location":"Luxembourg City, Luxembourg"}},{"ddc":["000"],"has_accepted_license":"1","file":[{"date_created":"2024-05-22T07:24:45Z","content_type":"application/pdf","file_name":"2024_LNCS_Majumdar.pdf","success":1,"creator":"dernst","file_id":"15415","access_level":"open_access","relation":"main_file","checksum":"492be74f69cd6ea42d38681082d0b521","date_updated":"2024-05-22T07:24:45Z","file_size":462173}],"quality_controlled":"1","corr_author":"1","publication":"30th International Conference on Tools and Algorithms for the Construction and Analysis of Systems","publication_identifier":{"eissn":["1611-3349"],"issn":["0302-9743"],"isbn":["9783031572555"]},"doi":"10.1007/978-3-031-57256-2_11","year":"2024","date_created":"2024-05-12T22:01:02Z","title":"Rabin games and colourful universal trees","abstract":[{"text":"We provide an algorithmto solve Rabin and Streett games over graphs\r\nwith n vertices,m edges, and k colours that runs in ˜O³mn(k!)1+o(1)´time and\r\nO(nk logk logn) space, where ˜O hides poly-logarithmic factors. Our algorithm\r\nis an improvement by a super quadratic dependence on k! from the currently\r\nbest known run time of O³mn2(k!)2+o(1)´, obtained by converting a Rabin\r\ngameinto a parity game,while simultaneously improving its exponential space\r\nrequirement.\r\nOur main technical ingredient is a characterisation of progress measures for\r\nRabin games using colourful trees and a combinatorial construction of succinctlyrepresented,\r\nuniversal colourful trees. Colourful universal trees are generalisations\r\nof universal trees used by Jurdzi´nski and Lazi´c (2017) to solve parity\r\ngames, as well as of Rabin progress measures of Klarlund and Kozen (1991).\r\nOur algorithm for Rabin games is a progress measure lifting algorithm where\r\nthe lifting is performed on succinct, colourful, universal trees.","lang":"eng"}],"external_id":{"isi":["001284187100011"],"arxiv":["2401.07548"]},"publication_status":"published","page":"213-231","article_processing_charge":"Yes (in subscription journal)","volume":14572,"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","author":[{"full_name":"Majumdar, Rupak","first_name":"Rupak","last_name":"Majumdar"},{"full_name":"Sağlam, Irmak","last_name":"Sağlam","first_name":"Irmak"},{"last_name":"Thejaswini","first_name":"K. S.","full_name":"Thejaswini, K. S.","id":"3807fb92-fdc1-11ee-bb4a-b4d8a431c753"}],"project":[{"name":"Vigilant Algorithmic Monitoring of Software","call_identifier":"H2020","grant_number":"101020093","_id":"62781420-2b32-11ec-9570-8d9b63373d4d"}],"citation":{"mla":"Majumdar, Rupak, et al. “Rabin Games and Colourful Universal Trees.” <i>30th International Conference on Tools and Algorithms for the Construction and Analysis of Systems</i>, vol. 14572, Springer Nature, 2024, pp. 213–31, doi:<a href=\"https://doi.org/10.1007/978-3-031-57256-2_11\">10.1007/978-3-031-57256-2_11</a>.","chicago":"Majumdar, Rupak, Irmak Sağlam, and K. S. Thejaswini. “Rabin Games and Colourful Universal Trees.” In <i>30th International Conference on Tools and Algorithms for the Construction and Analysis of Systems</i>, 14572:213–31. Springer Nature, 2024. <a href=\"https://doi.org/10.1007/978-3-031-57256-2_11\">https://doi.org/10.1007/978-3-031-57256-2_11</a>.","apa":"Majumdar, R., Sağlam, I., &#38; Thejaswini, K. S. (2024). Rabin games and colourful universal trees. In <i>30th International Conference on Tools and Algorithms for the Construction and Analysis of Systems</i> (Vol. 14572, pp. 213–231). Springer Nature. <a href=\"https://doi.org/10.1007/978-3-031-57256-2_11\">https://doi.org/10.1007/978-3-031-57256-2_11</a>","ista":"Majumdar R, Sağlam I, Thejaswini KS. 2024. Rabin games and colourful universal trees. 30th International Conference on Tools and Algorithms for the Construction and Analysis of Systems. , LNCS, vol. 14572, 213–231.","ama":"Majumdar R, Sağlam I, Thejaswini KS. Rabin games and colourful universal trees. In: <i>30th International Conference on Tools and Algorithms for the Construction and Analysis of Systems</i>. Vol 14572. Springer Nature; 2024:213-231. doi:<a href=\"https://doi.org/10.1007/978-3-031-57256-2_11\">10.1007/978-3-031-57256-2_11</a>","short":"R. Majumdar, I. Sağlam, K.S. Thejaswini, in:, 30th International Conference on Tools and Algorithms for the Construction and Analysis of Systems, Springer Nature, 2024, pp. 213–231.","ieee":"R. Majumdar, I. Sağlam, and K. S. Thejaswini, “Rabin games and colourful universal trees,” in <i>30th International Conference on Tools and Algorithms for the Construction and Analysis of Systems</i>, 2024, vol. 14572, pp. 213–231."},"day":"06","status":"public","alternative_title":["LNCS"],"ec_funded":1,"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"arxiv":1,"department":[{"_id":"ToHe"}],"publisher":"Springer Nature","date_updated":"2025-09-08T07:34:49Z","language":[{"iso":"eng"}],"month":"04","date_published":"2024-04-06T00:00:00Z","oa":1,"file_date_updated":"2024-05-22T07:24:45Z","isi":1,"_id":"15377","scopus_import":"1","type":"conference","acknowledgement":"This work is a part of the project VAMOS that has received funding from the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme, grant agreements No 101020093. Rupak Majumdar was partially supported by the DFG project 389792660 TRR 248-CPEC.","oa_version":"Published Version","intvolume":"     14572"},{"corr_author":"1","quality_controlled":"1","file":[{"file_id":"18803","access_level":"open_access","checksum":"fbcc9cc7bf274f024e4f4afc9c208f96","relation":"main_file","date_updated":"2025-01-09T09:36:41Z","file_size":566963,"date_created":"2025-01-09T09:36:41Z","file_name":"2024_CommPureApplMath_Erdoes.pdf","content_type":"application/pdf","success":1,"creator":"dernst"}],"has_accepted_license":"1","ddc":["510"],"year":"2024","date_created":"2024-05-12T22:01:02Z","issue":"9","publication_identifier":{"issn":["0010-3640"],"eissn":["1097-0312"]},"doi":"10.1002/cpa.22201","publication":"Communications on Pure and Applied Mathematics","page":"3785-3840","article_processing_charge":"Yes (via OA deal)","license":"https://creativecommons.org/licenses/by-nc-nd/4.0/","abstract":[{"text":"We consider N×N non-Hermitian random matrices of the form X+A, where A is a general deterministic matrix and N−−√X consists of independent entries with zero mean, unit variance, and bounded densities. For this ensemble, we prove (i) a Wegner estimate, i.e. that the local density of eigenvalues is bounded by N1+o(1) and (ii) that the expected condition number of any bulk eigenvalue is bounded by N1+o(1); both results are optimal up to the factor No(1). The latter result complements the very recent matching lower bound obtained in [15] (arXiv:2301.03549) and improves the N-dependence of the upper bounds in [5,6,32] (arXiv:1906.11819, arXiv:2005.08930, arXiv:2005.08908). Our main ingredient, a near-optimal lower tail estimate for the small singular values of X+A−z, is of independent interest.","lang":"eng"}],"publication_status":"published","external_id":{"arxiv":["2301.04981"],"isi":["001217139900001"]},"title":"Wegner estimate and upper bound on the eigenvalue condition number of non-Hermitian random matrices","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","author":[{"orcid":"0000-0001-5366-9603","id":"4DBD5372-F248-11E8-B48F-1D18A9856A87","full_name":"Erdös, László","last_name":"Erdös","first_name":"László"},{"last_name":"Ji","first_name":"Hong Chang","id":"dd216c0a-c1f9-11eb-beaf-e9ea9d2de76d","full_name":"Ji, Hong Chang"}],"OA_place":"publisher","volume":77,"citation":{"short":"L. Erdös, H.C. Ji, Communications on Pure and Applied Mathematics 77 (2024) 3785–3840.","ieee":"L. Erdös and H. C. Ji, “Wegner estimate and upper bound on the eigenvalue condition number of non-Hermitian random matrices,” <i>Communications on Pure and Applied Mathematics</i>, vol. 77, no. 9. Wiley, pp. 3785–3840, 2024.","ista":"Erdös L, Ji HC. 2024. Wegner estimate and upper bound on the eigenvalue condition number of non-Hermitian random matrices. Communications on Pure and Applied Mathematics. 77(9), 3785–3840.","ama":"Erdös L, Ji HC. Wegner estimate and upper bound on the eigenvalue condition number of non-Hermitian random matrices. <i>Communications on Pure and Applied Mathematics</i>. 2024;77(9):3785-3840. doi:<a href=\"https://doi.org/10.1002/cpa.22201\">10.1002/cpa.22201</a>","apa":"Erdös, L., &#38; Ji, H. C. (2024). Wegner estimate and upper bound on the eigenvalue condition number of non-Hermitian random matrices. <i>Communications on Pure and Applied Mathematics</i>. Wiley. <a href=\"https://doi.org/10.1002/cpa.22201\">https://doi.org/10.1002/cpa.22201</a>","chicago":"Erdös, László, and Hong Chang Ji. “Wegner Estimate and Upper Bound on the Eigenvalue Condition Number of Non-Hermitian Random Matrices.” <i>Communications on Pure and Applied Mathematics</i>. Wiley, 2024. <a href=\"https://doi.org/10.1002/cpa.22201\">https://doi.org/10.1002/cpa.22201</a>.","mla":"Erdös, László, and Hong Chang Ji. “Wegner Estimate and Upper Bound on the Eigenvalue Condition Number of Non-Hermitian Random Matrices.” <i>Communications on Pure and Applied Mathematics</i>, vol. 77, no. 9, Wiley, 2024, pp. 3785–840, doi:<a href=\"https://doi.org/10.1002/cpa.22201\">10.1002/cpa.22201</a>."},"project":[{"grant_number":"101020331","_id":"62796744-2b32-11ec-9570-940b20777f1d","name":"Random matrices beyond Wigner-Dyson-Mehta","call_identifier":"H2020"}],"OA_type":"hybrid","ec_funded":1,"tmp":{"short":"CC BY-NC-ND (4.0)","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","image":"/images/cc_by_nc_nd.png"},"day":"01","status":"public","isi":1,"oa":1,"file_date_updated":"2025-01-09T09:36:41Z","month":"09","language":[{"iso":"eng"}],"date_published":"2024-09-01T00:00:00Z","department":[{"_id":"LaEr"}],"arxiv":1,"publisher":"Wiley","date_updated":"2025-09-08T07:25:47Z","article_type":"original","oa_version":"Published Version","intvolume":"        77","type":"journal_article","acknowledgement":"László Erdős is partially supported by ERC Advanced Grant “RMTBeyond” No. 101020331. Hong Chang Ji is supported by ERC Advanced Grant “RMTBeyond” No. 101020331.","_id":"15378","scopus_import":"1"},{"quality_controlled":"1","file":[{"file_id":"18801","checksum":"dc8be74156657e8aab12a9d613233ee3","relation":"main_file","access_level":"open_access","date_updated":"2025-01-09T09:31:05Z","file_size":775825,"date_created":"2025-01-09T09:31:05Z","content_type":"application/pdf","file_name":"2024_BioEssays_Stockwell.pdf","creator":"dernst","success":1}],"has_accepted_license":"1","ddc":["570"],"year":"2024","date_created":"2024-05-12T22:01:02Z","article_number":" 2400006","issue":"7","publication_identifier":{"eissn":["1521-1878"],"issn":["0265-9247"]},"doi":"10.1002/bies.202400006","publication":"BioEssays","article_processing_charge":"Yes (in subscription journal)","abstract":[{"text":"Long-term potentiation (LTP) of excitatory synapses is a leading model to explain the concept of information storage in the brain. Multiple mechanisms contribute to LTP, but central amongst them is an increased sensitivity of the postsynaptic membrane to neurotransmitter release. This sensitivity is predominantly determined by the abundance and localization of AMPA-type glutamate receptors (AMPARs). A combination of AMPAR structural data, super-resolution imaging of excitatory synapses, and an abundance of electrophysiological studies are providing an ever-clearer picture of how AMPARs are recruited and organized at synaptic junctions. Here, we review the latest insights into this process, and discuss how both cytoplasmic and extracellular receptor elements cooperate to tune the AMPAR response at the hippocampal CA1 synapse.","lang":"eng"}],"publication_status":"published","external_id":{"isi":["001214545700001"],"pmid":["38693811"]},"title":"Tuning synaptic strength by regulation of AMPA glutamate receptor localization","author":[{"last_name":"Stockwell","first_name":"Imogen","full_name":"Stockwell, Imogen"},{"full_name":"Watson, Jake","id":"63836096-4690-11EA-BD4E-32803DDC885E","orcid":"0000-0002-8698-3823","last_name":"Watson","first_name":"Jake"},{"first_name":"Ingo H.","last_name":"Greger","full_name":"Greger, Ingo H."}],"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","volume":46,"OA_place":"publisher","pmid":1,"citation":{"mla":"Stockwell, Imogen, et al. “Tuning Synaptic Strength by Regulation of AMPA Glutamate Receptor Localization.” <i>BioEssays</i>, vol. 46, no. 7, 2400006, Wiley, 2024, doi:<a href=\"https://doi.org/10.1002/bies.202400006\">10.1002/bies.202400006</a>.","chicago":"Stockwell, Imogen, Jake Watson, and Ingo H. Greger. “Tuning Synaptic Strength by Regulation of AMPA Glutamate Receptor Localization.” <i>BioEssays</i>. Wiley, 2024. <a href=\"https://doi.org/10.1002/bies.202400006\">https://doi.org/10.1002/bies.202400006</a>.","apa":"Stockwell, I., Watson, J., &#38; Greger, I. H. (2024). Tuning synaptic strength by regulation of AMPA glutamate receptor localization. <i>BioEssays</i>. Wiley. <a href=\"https://doi.org/10.1002/bies.202400006\">https://doi.org/10.1002/bies.202400006</a>","ista":"Stockwell I, Watson J, Greger IH. 2024. Tuning synaptic strength by regulation of AMPA glutamate receptor localization. BioEssays. 46(7), 2400006.","ama":"Stockwell I, Watson J, Greger IH. Tuning synaptic strength by regulation of AMPA glutamate receptor localization. <i>BioEssays</i>. 2024;46(7). doi:<a href=\"https://doi.org/10.1002/bies.202400006\">10.1002/bies.202400006</a>","ieee":"I. Stockwell, J. Watson, and I. H. Greger, “Tuning synaptic strength by regulation of AMPA glutamate receptor localization,” <i>BioEssays</i>, vol. 46, no. 7. Wiley, 2024.","short":"I. Stockwell, J. Watson, I.H. Greger, BioEssays 46 (2024)."},"OA_type":"hybrid","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"day":"01","status":"public","isi":1,"oa":1,"file_date_updated":"2025-01-09T09:31:05Z","language":[{"iso":"eng"}],"month":"07","date_published":"2024-07-01T00:00:00Z","department":[{"_id":"PeJo"}],"publisher":"Wiley","date_updated":"2025-09-08T07:25:02Z","article_type":"review","intvolume":"        46","oa_version":"Published Version","acknowledgement":"The authors thank Alexander Scrutton and James M. Krieger for comments on the manuscript. The authors also acknowledge Shraddha Nayak for help with Figure 1B design. This work was supported by grants from the Medical Research Council (MC_U105174197), the BBSRC (BB/N002113/1), and the Wellcome Trust (223194/Z/21/Z) to IHG.","type":"journal_article","_id":"15379","scopus_import":"1"},{"ddc":["510"],"has_accepted_license":"1","quality_controlled":"1","file":[{"file_id":"19612","relation":"main_file","checksum":"0ee15c1493a6413cf356ab2f32c81a9e","access_level":"open_access","date_updated":"2025-04-23T08:01:36Z","file_size":522831,"date_created":"2025-04-23T08:01:36Z","file_name":"2024_JourApplCompTopo_BiswasRa.pdf","content_type":"application/pdf","creator":"dernst","success":1}],"corr_author":"1","publication":"Journal of Applied and Computational Topology","doi":"10.1007/s41468-024-00173-w","publication_identifier":{"issn":["2367-1726"],"eissn":["2367-1734"]},"date_created":"2024-05-12T22:01:03Z","year":"2024","title":"Depth in arrangements: Dehn–Sommerville–Euler relations with applications","external_id":{"pmid":["39308789"]},"publication_status":"published","abstract":[{"text":"The depth of a cell in an arrangement of n (non-vertical) great-spheres in Sd is the number of great-spheres that pass above the cell. We prove Euler-type relations, which imply extensions of the classic Dehn–Sommerville relations for convex polytopes to sublevel sets of the depth function, and we use the relations to extend the expressions for the number of faces of neighborly polytopes to the number of cells of levels in neighborly arrangements.","lang":"eng"}],"article_processing_charge":"Yes (via OA deal)","page":"557-578","pmid":1,"related_material":{"record":[{"id":"11658","relation":"earlier_version","status":"public"}]},"volume":8,"OA_place":"publisher","author":[{"last_name":"Biswas","first_name":"Ranita","full_name":"Biswas, Ranita","id":"3C2B033E-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-5372-7890"},{"last_name":"Cultrera Di Montesano","first_name":"Sebastiano","orcid":"0000-0001-6249-0832","id":"34D2A09C-F248-11E8-B48F-1D18A9856A87","full_name":"Cultrera Di Montesano, Sebastiano"},{"full_name":"Edelsbrunner, Herbert","id":"3FB178DA-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-9823-6833","first_name":"Herbert","last_name":"Edelsbrunner"},{"first_name":"Morteza","last_name":"Saghafian","id":"f86f7148-b140-11ec-9577-95435b8df824","full_name":"Saghafian, Morteza"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","project":[{"grant_number":"788183","_id":"266A2E9E-B435-11E9-9278-68D0E5697425","name":"Alpha Shape Theory Extended","call_identifier":"H2020"},{"_id":"268116B8-B435-11E9-9278-68D0E5697425","grant_number":"Z00342","call_identifier":"FWF","name":"Mathematics, Computer Science"},{"call_identifier":"FWF","name":"Persistence and stability of geometric complexes","_id":"2561EBF4-B435-11E9-9278-68D0E5697425","grant_number":"I02979-N35"}],"citation":{"ama":"Biswas R, Cultrera di Montesano S, Edelsbrunner H, Saghafian M. Depth in arrangements: Dehn–Sommerville–Euler relations with applications. <i>Journal of Applied and Computational Topology</i>. 2024;8:557-578. doi:<a href=\"https://doi.org/10.1007/s41468-024-00173-w\">10.1007/s41468-024-00173-w</a>","ista":"Biswas R, Cultrera di Montesano S, Edelsbrunner H, Saghafian M. 2024. Depth in arrangements: Dehn–Sommerville–Euler relations with applications. Journal of Applied and Computational Topology. 8, 557–578.","ieee":"R. Biswas, S. Cultrera di Montesano, H. Edelsbrunner, and M. Saghafian, “Depth in arrangements: Dehn–Sommerville–Euler relations with applications,” <i>Journal of Applied and Computational Topology</i>, vol. 8. Springer Nature, pp. 557–578, 2024.","short":"R. Biswas, S. Cultrera di Montesano, H. Edelsbrunner, M. Saghafian, Journal of Applied and Computational Topology 8 (2024) 557–578.","mla":"Biswas, Ranita, et al. “Depth in Arrangements: Dehn–Sommerville–Euler Relations with Applications.” <i>Journal of Applied and Computational Topology</i>, vol. 8, Springer Nature, 2024, pp. 557–78, doi:<a href=\"https://doi.org/10.1007/s41468-024-00173-w\">10.1007/s41468-024-00173-w</a>.","chicago":"Biswas, Ranita, Sebastiano Cultrera di Montesano, Herbert Edelsbrunner, and Morteza Saghafian. “Depth in Arrangements: Dehn–Sommerville–Euler Relations with Applications.” <i>Journal of Applied and Computational Topology</i>. Springer Nature, 2024. <a href=\"https://doi.org/10.1007/s41468-024-00173-w\">https://doi.org/10.1007/s41468-024-00173-w</a>.","apa":"Biswas, R., Cultrera di Montesano, S., Edelsbrunner, H., &#38; Saghafian, M. (2024). Depth in arrangements: Dehn–Sommerville–Euler relations with applications. <i>Journal of Applied and Computational Topology</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s41468-024-00173-w\">https://doi.org/10.1007/s41468-024-00173-w</a>"},"day":"01","status":"public","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"ec_funded":1,"OA_type":"hybrid","date_updated":"2025-05-14T09:27:57Z","publisher":"Springer Nature","department":[{"_id":"HeEd"}],"date_published":"2024-09-01T00:00:00Z","language":[{"iso":"eng"}],"month":"09","file_date_updated":"2025-04-23T08:01:36Z","oa":1,"scopus_import":"1","_id":"15380","acknowledgement":"The authors thank Uli Wagner and Emo Welzl for comments on an earlier version of this paper, and for pointing out related work in the prior literature.\r\nOpen access funding provided by Institute of Science and Technology (IST Austria). This project has received funding from the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme, Grant No. 788183, from the Wittgenstein Prize, Austrian Science Fund (FWF), Grant No. Z 342-N31, and from the DFG Collaborative Research Center TRR 109, ‘Discretization in Geometry and Dynamics’, Austrian Science Fund (FWF), Grant No. I 02979-N35.","type":"journal_article","oa_version":"Published Version","intvolume":"         8","article_type":"original"},{"_id":"15381","scopus_import":"1","article_type":"original","intvolume":"       112","oa_version":"Published Version","type":"journal_article","acknowledgement":"We thank the kind donations from Andrea Varro, Brian Sauer, Edward Boyden, and Peter Jonas. We thank Jago Wallenschus, Kerstin Kronenbitter, and Didier Gremelle for outstanding technical support; Laura Bollepalli for initial viral targeting experiments; Cihan Önal for initial electrophysiology experiments; Yoav Ben-Simon for histological advice; and Anton Nikitenko for contributing to the analysis. We acknowledge support from the Miba Machine Shop, Bioimaging-, Life Science- and Pre-Clinical Facilities at ISTA. This work was supported by the Austrian Science Fund (FWF I3713 to J.C. as part of the FOR 2143 research consortium), the Deutsche Forschungsgemeinschaft (DFG) (WU 503/2-2 to P.W.), and the Medical Research Council, United Kingdom (grant G1100546/2 to P.W.).","month":"06","language":[{"iso":"eng"}],"date_published":"2024-06-19T00:00:00Z","publisher":"Cell Press","department":[{"_id":"JoCs"}],"date_updated":"2025-09-08T07:26:42Z","isi":1,"oa":1,"file_date_updated":"2025-01-09T09:15:31Z","status":"public","day":"19","OA_type":"hybrid","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"citation":{"ieee":"D. K. Rangel Guerrero <i>et al.</i>, “Hippocampal cholecystokinin-expressing interneurons regulate temporal coding and contextual learning,” <i>Neuron</i>, vol. 112, no. 12. Cell Press, p. 2045–2061.e10, 2024.","short":"D.K. Rangel Guerrero, K. Balueva, U. Barayeu, P. Baracskay, I. Gridchyn, M. Nardin, C.N. Roth, P. Wulff, J.L. Csicsvari, Neuron 112 (2024) 2045–2061.e10.","ama":"Rangel Guerrero DK, Balueva K, Barayeu U, et al. Hippocampal cholecystokinin-expressing interneurons regulate temporal coding and contextual learning. <i>Neuron</i>. 2024;112(12):2045-2061.e10. doi:<a href=\"https://doi.org/10.1016/j.neuron.2024.03.019\">10.1016/j.neuron.2024.03.019</a>","ista":"Rangel Guerrero DK, Balueva K, Barayeu U, Baracskay P, Gridchyn I, Nardin M, Roth CN, Wulff P, Csicsvari JL. 2024. Hippocampal cholecystokinin-expressing interneurons regulate temporal coding and contextual learning. Neuron. 112(12), 2045–2061.e10.","chicago":"Rangel Guerrero, Dámaris K, Kira Balueva, Uladzislau Barayeu, Peter Baracskay, Igor Gridchyn, Michele Nardin, Chiara N Roth, Peer Wulff, and Jozsef L Csicsvari. “Hippocampal Cholecystokinin-Expressing Interneurons Regulate Temporal Coding and Contextual Learning.” <i>Neuron</i>. Cell Press, 2024. <a href=\"https://doi.org/10.1016/j.neuron.2024.03.019\">https://doi.org/10.1016/j.neuron.2024.03.019</a>.","apa":"Rangel Guerrero, D. K., Balueva, K., Barayeu, U., Baracskay, P., Gridchyn, I., Nardin, M., … Csicsvari, J. L. (2024). Hippocampal cholecystokinin-expressing interneurons regulate temporal coding and contextual learning. <i>Neuron</i>. Cell Press. <a href=\"https://doi.org/10.1016/j.neuron.2024.03.019\">https://doi.org/10.1016/j.neuron.2024.03.019</a>","mla":"Rangel Guerrero, Dámaris K., et al. “Hippocampal Cholecystokinin-Expressing Interneurons Regulate Temporal Coding and Contextual Learning.” <i>Neuron</i>, vol. 112, no. 12, Cell Press, 2024, p. 2045–2061.e10, doi:<a href=\"https://doi.org/10.1016/j.neuron.2024.03.019\">10.1016/j.neuron.2024.03.019</a>."},"project":[{"grant_number":"I 3713-B27","_id":"2654F984-B435-11E9-9278-68D0E5697425","name":"Interneuro plasticity during spatial learning","call_identifier":"FWF"}],"acknowledged_ssus":[{"_id":"M-Shop"},{"_id":"Bio"},{"_id":"LifeSc"},{"_id":"PreCl"}],"pmid":1,"author":[{"first_name":"Dámaris K","last_name":"Rangel Guerrero","full_name":"Rangel Guerrero, Dámaris K","id":"4871BCE6-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-8602-4374"},{"full_name":"Balueva, Kira","first_name":"Kira","last_name":"Balueva"},{"last_name":"Barayeu","first_name":"Uladzislau","id":"b515be12-ec90-11ea-b966-d0b5e15613d2","full_name":"Barayeu, Uladzislau"},{"first_name":"Peter","last_name":"Baracskay","full_name":"Baracskay, Peter","id":"361CC00E-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Gridchyn, Igor","orcid":"0000-0002-1807-1929","id":"4B60654C-F248-11E8-B48F-1D18A9856A87","first_name":"Igor","last_name":"Gridchyn"},{"orcid":"0000-0001-8849-6570","id":"30BD0376-F248-11E8-B48F-1D18A9856A87","full_name":"Nardin, Michele","last_name":"Nardin","first_name":"Michele"},{"first_name":"Chiara N","last_name":"Roth","id":"37BB4FB6-F248-11E8-B48F-1D18A9856A87","full_name":"Roth, Chiara N"},{"full_name":"Wulff, Peer","last_name":"Wulff","first_name":"Peer"},{"id":"3FA14672-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-5193-4036","full_name":"Csicsvari, Jozsef L","last_name":"Csicsvari","first_name":"Jozsef L"}],"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","OA_place":"publisher","volume":112,"title":"Hippocampal cholecystokinin-expressing interneurons regulate temporal coding and contextual learning","page":"2045-2061.e10","article_processing_charge":"Yes (via OA deal)","abstract":[{"lang":"eng","text":"Cholecystokinin-expressing interneurons (CCKIs) are hypothesized to shape pyramidal cell-firing patterns and regulate network oscillations and related network state transitions. To directly probe their role in the CA1 region, we silenced their activity using optogenetic and chemogenetic tools in mice. Opto-tagged CCKIs revealed a heterogeneous population, and their optogenetic silencing triggered wide disinhibitory network changes affecting both pyramidal cells and other interneurons. CCKI silencing enhanced pyramidal cell burst firing and altered the temporal coding of place cells: theta phase precession was disrupted, whereas sequence reactivation was enhanced. Chemogenetic CCKI silencing did not alter the acquisition of spatial reference memories on the Morris water maze but enhanced the recall of contextual fear memories and enabled selective recall when similar environments were tested. This work suggests the key involvement of CCKIs in the control of place-cell temporal coding and the formation of contextual memories."}],"external_id":{"pmid":["38636524"],"isi":["001300571400001"]},"publication_status":"published","issue":"12","doi":"10.1016/j.neuron.2024.03.019","publication_identifier":{"issn":["0896-6273"],"eissn":["1097-4199"]},"publication":"Neuron","year":"2024","date_created":"2024-05-12T22:01:03Z","has_accepted_license":"1","ddc":["570"],"corr_author":"1","quality_controlled":"1","file":[{"access_level":"open_access","checksum":"de5b18ff293d42bd90e83a193e889844","relation":"main_file","date_updated":"2025-01-09T09:15:31Z","file_size":9149079,"file_id":"18798","success":1,"creator":"dernst","date_created":"2025-01-09T09:15:31Z","content_type":"application/pdf","file_name":"2024_Neuron_RangelGuerrero.pdf"}]},{"file":[{"file_id":"15396","file_size":"1149617663","date_updated":"2024-05-15T06:09:17Z","relation":"main_file","checksum":"9205eb0876f0f08552dbad80d6884b4b","access_level":"open_access","file_name":"PatchClamp.zip","content_type":"application/zip","date_created":"2024-05-15T06:09:17Z","creator":"mjoesch","success":1},{"file_name":"SiliconProbe.zip","content_type":"application/zip","date_created":"2024-05-15T06:09:12Z","success":1,"creator":"mjoesch","file_id":"15397","file_size":"564903112","date_updated":"2024-05-15T06:09:12Z","access_level":"open_access","relation":"main_file"},{"file_id":"15398","access_level":"open_access","relation":"main_file","checksum":"49a807bbab06b5fada38f532e2176e2e","file_size":"11685703","date_updated":"2024-05-15T06:09:14Z","date_created":"2024-05-15T06:09:14Z","file_name":"WesternBlot.zip","content_type":"application/zip","success":1,"creator":"mjoesch"},{"date_updated":"2024-05-15T06:09:38Z","file_size":"1335626779","access_level":"open_access","relation":"main_file","checksum":"beeeeaa43770090f3b291209ed6b0623","file_id":"15399","success":1,"creator":"mjoesch","content_type":"application/zip","file_name":"Behaviour.zip","date_created":"2024-05-15T06:09:38Z"},{"creator":"mjoesch","success":1,"file_name":"Readme_Data.txt","content_type":"text/plain","date_created":"2024-05-16T09:08:20Z","date_updated":"2024-05-16T09:08:20Z","file_size":18841,"relation":"main_file","checksum":"8862ad7719388304d1d19f8e7db8bb00","access_level":"open_access","file_id":"15400"}],"corr_author":"1","ddc":["570"],"has_accepted_license":"1","year":"2024","date_created":"2024-05-13T15:04:04Z","doi":"10.15479/AT:ISTA:15385","abstract":[{"text":"Relevant information about the data can be found in the 'Readme_Data.txt' file. \r\nA previous version of the publication can be found on BioRxiv: https://www.biorxiv.org/content/10.1101/2022.10.11.511691v4\r\nand published in Plos Biology (2024)","lang":"eng"}],"license":"https://creativecommons.org/licenses/by-nc/4.0/","article_processing_charge":"No","title":"Shared behavioural impairments in visual perception and place avoidance across different autism models are driven by periaqueductal grey hypoexcitability in Setd5 haploinsufficient mice","keyword":["ASD","periaqueductal gray","perception","behavior","potassium channels"],"user_id":"68b8ca59-c5b3-11ee-8790-cd641c68093d","author":[{"last_name":"Burnett","first_name":"Laura","orcid":"0000-0002-8937-410X","id":"3B717F68-F248-11E8-B48F-1D18A9856A87","full_name":"Burnett, Laura"},{"last_name":"Koppensteiner","first_name":"Peter","id":"3B8B25A8-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-3509-1948","full_name":"Koppensteiner, Peter"},{"full_name":"Symonova, Olga","orcid":"0000-0003-2012-9947","id":"3C0C7BC6-F248-11E8-B48F-1D18A9856A87","first_name":"Olga","last_name":"Symonova"},{"last_name":"Masson","first_name":"Tomas","full_name":"Masson, Tomas","id":"93ac43e8-8599-11eb-9b86-f6efb0a4c207","orcid":"0000-0002-2634-6283"},{"first_name":"Tomas A","last_name":"Vega Zuniga","id":"2E7C4E78-F248-11E8-B48F-1D18A9856A87","full_name":"Vega Zuniga, Tomas A"},{"last_name":"Contreras","first_name":"Ximena","full_name":"Contreras, Ximena","id":"475990FE-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Rülicke","first_name":"Thomas","full_name":"Rülicke, Thomas"},{"first_name":"Ryuichi","last_name":"Shigemoto","orcid":"0000-0001-8761-9444","id":"499F3ABC-F248-11E8-B48F-1D18A9856A87","full_name":"Shigemoto, Ryuichi"},{"full_name":"Novarino, Gaia","id":"3E57A680-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-7673-7178","last_name":"Novarino","first_name":"Gaia"},{"full_name":"Jösch, Maximilian A","id":"2BD278E6-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-3937-1330","first_name":"Maximilian A","last_name":"Jösch"}],"related_material":{"record":[{"relation":"used_in_publication","id":"17142","status":"public"}]},"acknowledged_ssus":[{"_id":"PreCl"},{"_id":"M-Shop"},{"_id":"LifeSc"},{"_id":"Bio"}],"citation":{"ista":"Burnett L, Koppensteiner P, Symonova O, Masson T, Vega Zuniga TA, Contreras X, Rülicke T, Shigemoto R, Novarino G, Jösch MA. 2024. Shared behavioural impairments in visual perception and place avoidance across different autism models are driven by periaqueductal grey hypoexcitability in Setd5 haploinsufficient mice, Institute of Science and Technology Austria, <a href=\"https://doi.org/10.15479/AT:ISTA:15385\">10.15479/AT:ISTA:15385</a>.","ama":"Burnett L, Koppensteiner P, Symonova O, et al. Shared behavioural impairments in visual perception and place avoidance across different autism models are driven by periaqueductal grey hypoexcitability in Setd5 haploinsufficient mice. 2024. doi:<a href=\"https://doi.org/10.15479/AT:ISTA:15385\">10.15479/AT:ISTA:15385</a>","short":"L. Burnett, P. Koppensteiner, O. Symonova, T. Masson, T.A. Vega Zuniga, X. Contreras, T. Rülicke, R. Shigemoto, G. Novarino, M.A. Jösch, (2024).","ieee":"L. Burnett <i>et al.</i>, “Shared behavioural impairments in visual perception and place avoidance across different autism models are driven by periaqueductal grey hypoexcitability in Setd5 haploinsufficient mice.” Institute of Science and Technology Austria, 2024.","mla":"Burnett, Laura, et al. <i>Shared Behavioural Impairments in Visual Perception and Place Avoidance across Different Autism Models Are Driven by Periaqueductal Grey Hypoexcitability in Setd5 Haploinsufficient Mice</i>. Institute of Science and Technology Austria, 2024, doi:<a href=\"https://doi.org/10.15479/AT:ISTA:15385\">10.15479/AT:ISTA:15385</a>.","apa":"Burnett, L., Koppensteiner, P., Symonova, O., Masson, T., Vega Zuniga, T. A., Contreras, X., … Jösch, M. A. (2024). Shared behavioural impairments in visual perception and place avoidance across different autism models are driven by periaqueductal grey hypoexcitability in Setd5 haploinsufficient mice. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT:ISTA:15385\">https://doi.org/10.15479/AT:ISTA:15385</a>","chicago":"Burnett, Laura, Peter Koppensteiner, Olga Symonova, Tomas Masson, Tomas A Vega Zuniga, Ximena Contreras, Thomas Rülicke, Ryuichi Shigemoto, Gaia Novarino, and Maximilian A Jösch. “Shared Behavioural Impairments in Visual Perception and Place Avoidance across Different Autism Models Are Driven by Periaqueductal Grey Hypoexcitability in Setd5 Haploinsufficient Mice.” Institute of Science and Technology Austria, 2024. <a href=\"https://doi.org/10.15479/AT:ISTA:15385\">https://doi.org/10.15479/AT:ISTA:15385</a>."},"tmp":{"short":"CC BY-NC (4.0)","name":"Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)","image":"/images/cc_by_nc.png","legal_code_url":"https://creativecommons.org/licenses/by-nc/4.0/legalcode"},"status":"public","day":"15","oa":1,"file_date_updated":"2024-05-16T09:08:20Z","department":[{"_id":"MaJö"},{"_id":"PreCl"},{"_id":"SiHi"},{"_id":"RySh"},{"_id":"GaNo"}],"publisher":"Institute of Science and Technology Austria","date_updated":"2025-09-08T07:57:11Z","month":"05","date_published":"2024-05-15T00:00:00Z","acknowledgement":"We thank Armel Nicolas, Bella Bruszel and Ewelina Dutkiewicz from the ISTA Mass Spectrometry Service (Lab Services Facilities) for all Proteomics work, including samples preparation, LC/MS data acquisition, searches and data evaluation. We thank Prof. Peter Jonas for his suggestion on the involvement of potassium channels and members of the Neuroethology group for their comments on the manuscript. Katalin Szigeti and Julie Murmann for experimental help. This research was supported by the Scientific Service Units of ISTA through resources provided by the Lab Support Facility, the Imaging and Optics Facility, the Machine Shop Unit and the Preclinical Facility, especially Freyja Langer and Michael Schunn. ","type":"research_data","oa_version":"Published Version","_id":"15385"},{"publication":"Journal of Comparative Neurology","doi":"10.1002/cne.25620","publication_identifier":{"eissn":["1096-9861"],"issn":["0021-9967"]},"issue":"5","article_number":"e25620","date_created":"2024-05-19T22:01:12Z","year":"2024","main_file_link":[{"open_access":"1","url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11090467"}],"quality_controlled":"1","pmid":1,"OA_place":"repository","volume":532,"author":[{"full_name":"Reiner, Anton","last_name":"Reiner","first_name":"Anton"},{"last_name":"Medina","first_name":"Loreta","full_name":"Medina, Loreta"},{"full_name":"Abellan, Antonio","last_name":"Abellan","first_name":"Antonio"},{"full_name":"Deng, Yunping","first_name":"Yunping","last_name":"Deng"},{"full_name":"Toledo, Claudio A.B.","last_name":"Toledo","first_name":"Claudio A.B."},{"full_name":"Luksch, Harald","last_name":"Luksch","first_name":"Harald"},{"id":"2E7C4E78-F248-11E8-B48F-1D18A9856A87","full_name":"Vega Zuniga, Tomas A","first_name":"Tomas A","last_name":"Vega Zuniga"},{"full_name":"Riley, Nell B.","last_name":"Riley","first_name":"Nell B."},{"first_name":"William","last_name":"Hodos","full_name":"Hodos, William"},{"full_name":"Karten, Harvey J.","last_name":"Karten","first_name":"Harvey J."}],"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","title":"Neurochemistry and circuit organization of the lateral spiriform nucleus of birds: A uniquely nonmammalian direct pathway component of the basal ganglia","external_id":{"pmid":["38733146"],"isi":["001217825300001"]},"publication_status":"published","abstract":[{"text":"We used diverse methods to characterize the role of avian lateral spiriform nucleus (SpL) in basal ganglia motor function. Connectivity analysis showed that SpL receives input from globus pallidus (GP), and the intrapeduncular nucleus (INP) located ventromedial to GP, whose neurons express numerous striatal markers. SpL-projecting GP neurons were large and aspiny, while SpL-projecting INP neurons were medium sized and spiny. Connectivity analysis further showed that SpL receives inputs from subthalamic nucleus (STN) and substantia nigra pars reticulata (SNr), and that the SNr also receives inputs from GP, INP, and STN. Neurochemical analysis showed that SpL neurons express ENK, GAD, and a variety of pallidal neuron markers, and receive GABAergic terminals, some of which also contain DARPP32, consistent with GP pallidal and INP striatal inputs. Connectivity and neurochemical analysis showed that the SpL input to tectum prominently ends on GABAA receptor-enriched tectobulbar neurons. Behavioral studies showed that lesions of SpL impair visuomotor behaviors involving tracking and pecking moving targets. Our results suggest that SpL modulates brainstem-projecting tectobulbar neurons in a manner comparable to the demonstrated influence of GP internus on motor thalamus and of SNr on tectobulbar neurons in mammals. Given published data in amphibians and reptiles, it seems likely the SpL circuit represents a major direct pathway-type circuit by which the basal ganglia exerts its motor influence in nonmammalian tetrapods. The present studies also show that avian striatum is divided into three spatially segregated territories with differing connectivity, a medial striato-nigral territory, a dorsolateral striato-GP territory, and the ventrolateral INP motor territory.","lang":"eng"}],"article_processing_charge":"No","status":"public","day":"01","OA_type":"green","citation":{"mla":"Reiner, Anton, et al. “Neurochemistry and Circuit Organization of the Lateral Spiriform Nucleus of Birds: A Uniquely Nonmammalian Direct Pathway Component of the Basal Ganglia.” <i>Journal of Comparative Neurology</i>, vol. 532, no. 5, e25620, Wiley, 2024, doi:<a href=\"https://doi.org/10.1002/cne.25620\">10.1002/cne.25620</a>.","chicago":"Reiner, Anton, Loreta Medina, Antonio Abellan, Yunping Deng, Claudio A.B. Toledo, Harald Luksch, Tomas A Vega Zuniga, Nell B. Riley, William Hodos, and Harvey J. Karten. “Neurochemistry and Circuit Organization of the Lateral Spiriform Nucleus of Birds: A Uniquely Nonmammalian Direct Pathway Component of the Basal Ganglia.” <i>Journal of Comparative Neurology</i>. Wiley, 2024. <a href=\"https://doi.org/10.1002/cne.25620\">https://doi.org/10.1002/cne.25620</a>.","apa":"Reiner, A., Medina, L., Abellan, A., Deng, Y., Toledo, C. A. B., Luksch, H., … Karten, H. J. (2024). Neurochemistry and circuit organization of the lateral spiriform nucleus of birds: A uniquely nonmammalian direct pathway component of the basal ganglia. <i>Journal of Comparative Neurology</i>. Wiley. <a href=\"https://doi.org/10.1002/cne.25620\">https://doi.org/10.1002/cne.25620</a>","ista":"Reiner A, Medina L, Abellan A, Deng Y, Toledo CAB, Luksch H, Vega Zuniga TA, Riley NB, Hodos W, Karten HJ. 2024. Neurochemistry and circuit organization of the lateral spiriform nucleus of birds: A uniquely nonmammalian direct pathway component of the basal ganglia. Journal of Comparative Neurology. 532(5), e25620.","ama":"Reiner A, Medina L, Abellan A, et al. Neurochemistry and circuit organization of the lateral spiriform nucleus of birds: A uniquely nonmammalian direct pathway component of the basal ganglia. <i>Journal of Comparative Neurology</i>. 2024;532(5). doi:<a href=\"https://doi.org/10.1002/cne.25620\">10.1002/cne.25620</a>","ieee":"A. Reiner <i>et al.</i>, “Neurochemistry and circuit organization of the lateral spiriform nucleus of birds: A uniquely nonmammalian direct pathway component of the basal ganglia,” <i>Journal of Comparative Neurology</i>, vol. 532, no. 5. Wiley, 2024.","short":"A. Reiner, L. Medina, A. Abellan, Y. Deng, C.A.B. Toledo, H. Luksch, T.A. Vega Zuniga, N.B. Riley, W. Hodos, H.J. Karten, Journal of Comparative Neurology 532 (2024)."},"scopus_import":"1","_id":"15404","type":"journal_article","acknowledgement":"We gratefully thank Marion Joni, Tony Laverghetta, Sherry Cuthbertson, Gary Henderson, and Patricia Lindaman for technical assistance. The research presented here has been supported by NIH grants NS-16857, NS-19620, NS-28721, and EY-05298, and The Methodist Hospitals Endowed Professorship in Neuroscience (A. R.), by grant number 09/50623-9 from the Fundacao de Amparo a Pesquisa do Estado de Sao Paulo (C. A. B. T.), by NIH grant EY-00735 (W. H.), and by NIH grants NS-12078 and EY-02145 (H. J. K.).","oa_version":"Submitted Version","intvolume":"       532","article_type":"original","date_updated":"2025-09-08T07:29:27Z","department":[{"_id":"MaJö"}],"publisher":"Wiley","date_published":"2024-05-01T00:00:00Z","month":"05","language":[{"iso":"eng"}],"oa":1,"isi":1},{"volume":966,"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","author":[{"full_name":"Yue, Minghao","first_name":"Minghao","last_name":"Yue"},{"full_name":"Eilers, Anna Christina","first_name":"Anna Christina","last_name":"Eilers"},{"full_name":"Simcoe, Robert A.","first_name":"Robert A.","last_name":"Simcoe"},{"last_name":"Mackenzie","first_name":"Ruari","full_name":"Mackenzie, Ruari"},{"last_name":"Matthee","first_name":"Jorryt J","full_name":"Matthee, Jorryt J","orcid":"0000-0003-2871-127X","id":"7439a258-f3c0-11ec-9501-9df22fe06720"},{"last_name":"Kashino","first_name":"Daichi","full_name":"Kashino, Daichi"},{"last_name":"Bordoloi","first_name":"Rongmon","full_name":"Bordoloi, Rongmon"},{"first_name":"Simon J.","last_name":"Lilly","full_name":"Lilly, Simon J."},{"full_name":"Naidu, Rohan P.","first_name":"Rohan P.","last_name":"Naidu"}],"title":"EIGER. V. Characterizing the host galaxies of luminous quasars at z ≳ 6","abstract":[{"lang":"eng","text":"We report JWST/NIRCam measurements of quasar host galaxy emissions and supermassive black hole (SMBH) masses for six quasars at 5.9 < z < 7.1 in the Emission-line galaxies and Intergalactic Gas in the Epoch of Reionization (EIGER) project. We obtain deep NIRCam imaging in the F115W, F200W, and F356W bands, as well as F356W grism spectroscopy of the quasars. We use bright unsaturated stars to construct models of the point-spread functions (PSFs) and estimate the errors of these PSFs. We then measure or constrain the fluxes and morphology of the quasar host galaxies by fitting the quasar images as a point source plus an exponential disk. We successfully detect the host galaxies of three quasars, which have host-to-quasar-flux ratios of ∼1%–5%. Spectral energy distribution fitting suggests that these quasar host galaxies have stellar masses of M* ≳ 1010M⊙. For quasars with host galaxy nondetections, we estimate the upper limits of their stellar masses. We use the grism spectra to measure the Hβ line profile and the continuum luminosity, then estimate the SMBH masses for the quasars. Our results indicate that the positive relation between SMBH masses and host galaxy stellar masses already exists at redshift z ≳ 6. The quasars in our sample show a high BH-to-stellar-mass ratio of MBH/M* ∼ 0.15, which is about ∼2 dex higher than local relations. We find that selection effects only contribute partially to the high MBH/M* ratios of high-redshift quasars. This result hints at a possible redshift evolution of the MBH–M* relation."}],"external_id":{"isi":["001214916200001"]},"publication_status":"published","article_processing_charge":"Yes","publication":"Astrophysical Journal","issue":"2","publication_identifier":{"issn":["0004-637X"],"eissn":["1538-4357"]},"doi":"10.3847/1538-4357/ad3914","article_number":"176","year":"2024","date_created":"2024-05-19T22:01:12Z","ddc":["520"],"has_accepted_license":"1","file":[{"content_type":"application/pdf","file_name":"2024_AstrophysicalJourn_Yue.pdf","date_created":"2024-05-21T11:13:25Z","success":1,"creator":"dernst","file_id":"15410","date_updated":"2024-05-21T11:13:25Z","file_size":4472346,"access_level":"open_access","relation":"main_file","checksum":"47b428f6209d8a6f9869031d9cb8dae6"}],"quality_controlled":"1","_id":"15405","scopus_import":"1","acknowledgement":"We thank the referee for the valuable comments on this paper. We thank John Silverman, Madeline Marshall, MingYang Zhuang, Weizhe Liu, and Jinyi Yang for inspiring discussions and suggestions. D.K. is grateful for the support from JSPS KAKENHI grant No. JP21K13956. This work is based on observations made with the NASA/ESA/CSA James Webb Space Telescope. The data were obtained from the Mikulski Archive for Space Telescopes at the Space Telescope\r\nScience Institute, which is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS 5-03127 for JWST. These observations are\r\nassociated with program ID #1243. Facility: JWST (NIRCam) Software: astropy (Astropy Collaboration et al. 2013, 2018), psfMC (Mechtley 2014), webbpsf (Perrin et al. 2014), jwst.","type":"journal_article","article_type":"original","intvolume":"       966","oa_version":"Published Version","department":[{"_id":"JoMa"}],"publisher":"IOP Publishing","date_updated":"2025-09-08T07:30:17Z","month":"05","language":[{"iso":"eng"}],"date_published":"2024-05-01T00:00:00Z","oa":1,"file_date_updated":"2024-05-21T11:13:25Z","DOAJ_listed":"1","isi":1,"status":"public","day":"01","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"citation":{"mla":"Yue, Minghao, et al. “EIGER. V. Characterizing the Host Galaxies of Luminous Quasars at z ≳ 6.” <i>Astrophysical Journal</i>, vol. 966, no. 2, 176, IOP Publishing, 2024, doi:<a href=\"https://doi.org/10.3847/1538-4357/ad3914\">10.3847/1538-4357/ad3914</a>.","apa":"Yue, M., Eilers, A. C., Simcoe, R. A., Mackenzie, R., Matthee, J. J., Kashino, D., … Naidu, R. P. (2024). EIGER. V. Characterizing the host galaxies of luminous quasars at z ≳ 6. <i>Astrophysical Journal</i>. IOP Publishing. <a href=\"https://doi.org/10.3847/1538-4357/ad3914\">https://doi.org/10.3847/1538-4357/ad3914</a>","chicago":"Yue, Minghao, Anna Christina Eilers, Robert A. Simcoe, Ruari Mackenzie, Jorryt J Matthee, Daichi Kashino, Rongmon Bordoloi, Simon J. Lilly, and Rohan P. Naidu. “EIGER. V. Characterizing the Host Galaxies of Luminous Quasars at z ≳ 6.” <i>Astrophysical Journal</i>. IOP Publishing, 2024. <a href=\"https://doi.org/10.3847/1538-4357/ad3914\">https://doi.org/10.3847/1538-4357/ad3914</a>.","ama":"Yue M, Eilers AC, Simcoe RA, et al. EIGER. V. Characterizing the host galaxies of luminous quasars at z ≳ 6. <i>Astrophysical Journal</i>. 2024;966(2). doi:<a href=\"https://doi.org/10.3847/1538-4357/ad3914\">10.3847/1538-4357/ad3914</a>","ista":"Yue M, Eilers AC, Simcoe RA, Mackenzie R, Matthee JJ, Kashino D, Bordoloi R, Lilly SJ, Naidu RP. 2024. EIGER. V. Characterizing the host galaxies of luminous quasars at z ≳ 6. Astrophysical Journal. 966(2), 176.","short":"M. Yue, A.C. Eilers, R.A. Simcoe, R. Mackenzie, J.J. Matthee, D. Kashino, R. Bordoloi, S.J. Lilly, R.P. Naidu, Astrophysical Journal 966 (2024).","ieee":"M. Yue <i>et al.</i>, “EIGER. V. Characterizing the host galaxies of luminous quasars at z ≳ 6,” <i>Astrophysical Journal</i>, vol. 966, no. 2. IOP Publishing, 2024."}},{"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"status":"public","day":"01","citation":{"short":"M.L. Savchenko, J. Gospodarič, A. Shuvaev, I.A. Dmitriev, V. Dziom, A.A. Dobretsova, N.N. Mikhailov, Z.D. Kvon, A. Pimenov, Physical Review Research 6 (2024).","ieee":"M. L. Savchenko <i>et al.</i>, “Optical Shubnikov-de Haas oscillations in two-dimensional electron systems,” <i>Physical Review Research</i>, vol. 6, no. 2. American Physical Society, 2024.","ama":"Savchenko ML, Gospodarič J, Shuvaev A, et al. Optical Shubnikov-de Haas oscillations in two-dimensional electron systems. <i>Physical Review Research</i>. 2024;6(2). doi:<a href=\"https://doi.org/10.1103/PhysRevResearch.6.L022027\">10.1103/PhysRevResearch.6.L022027</a>","ista":"Savchenko ML, Gospodarič J, Shuvaev A, Dmitriev IA, Dziom V, Dobretsova AA, Mikhailov NN, Kvon ZD, Pimenov A. 2024. Optical Shubnikov-de Haas oscillations in two-dimensional electron systems. Physical Review Research. 6(2), L022027.","apa":"Savchenko, M. L., Gospodarič, J., Shuvaev, A., Dmitriev, I. A., Dziom, V., Dobretsova, A. A., … Pimenov, A. (2024). Optical Shubnikov-de Haas oscillations in two-dimensional electron systems. <i>Physical Review Research</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevResearch.6.L022027\">https://doi.org/10.1103/PhysRevResearch.6.L022027</a>","chicago":"Savchenko, M. L., J. Gospodarič, A. Shuvaev, I. A. Dmitriev, Vlad Dziom, A. A. Dobretsova, N. N. Mikhailov, Z. D. Kvon, and A. Pimenov. “Optical Shubnikov-de Haas Oscillations in Two-Dimensional Electron Systems.” <i>Physical Review Research</i>. American Physical Society, 2024. <a href=\"https://doi.org/10.1103/PhysRevResearch.6.L022027\">https://doi.org/10.1103/PhysRevResearch.6.L022027</a>.","mla":"Savchenko, M. L., et al. “Optical Shubnikov-de Haas Oscillations in Two-Dimensional Electron Systems.” <i>Physical Review Research</i>, vol. 6, no. 2, L022027, American Physical Society, 2024, doi:<a href=\"https://doi.org/10.1103/PhysRevResearch.6.L022027\">10.1103/PhysRevResearch.6.L022027</a>."},"article_type":"letter_note","intvolume":"         6","oa_version":"Published Version","acknowledgement":"This research was funded in whole or in part by the Austrian Science Fund (FWF) [10.55776/I3456,10.55776/I5539]. I.A.D. acknowledges the financial support of the German Research Foundation (DM 1/6-1). The quantum well growth and transport measurements were supported by RSF 23-72-30003. For open access purposes, the authors have applied a CC BY public copyright license to any authoraccepted manuscript version arising from this submission.","type":"journal_article","_id":"15406","scopus_import":"1","oa":1,"file_date_updated":"2024-05-22T06:39:35Z","DOAJ_listed":"1","month":"04","language":[{"iso":"eng"}],"date_published":"2024-04-01T00:00:00Z","publisher":"American Physical Society","department":[{"_id":"ZhAl"}],"arxiv":1,"date_updated":"2025-05-14T09:31:15Z","year":"2024","date_created":"2024-05-19T22:01:12Z","article_number":"L022027","issue":"2","publication_identifier":{"eissn":["2643-1564"]},"doi":"10.1103/PhysRevResearch.6.L022027","publication":"Physical Review Research","file":[{"file_id":"15412","access_level":"open_access","relation":"main_file","checksum":"78c8c3cf1bda766e3de0db45f143a367","file_size":1697856,"date_updated":"2024-05-22T06:39:35Z","date_created":"2024-05-22T06:39:35Z","content_type":"application/pdf","file_name":"2024_PhysicalReviewResearch_Savchenko.pdf","success":1,"creator":"dernst"}],"quality_controlled":"1","has_accepted_license":"1","ddc":["530"],"author":[{"first_name":"M. L.","last_name":"Savchenko","full_name":"Savchenko, M. L."},{"first_name":"J.","last_name":"Gospodarič","full_name":"Gospodarič, J."},{"full_name":"Shuvaev, A.","first_name":"A.","last_name":"Shuvaev"},{"full_name":"Dmitriev, I. A.","first_name":"I. A.","last_name":"Dmitriev"},{"full_name":"Dziom, Vlad","id":"6A9A37C2-8C5C-11E9-AE53-F2FDE5697425","orcid":"0000-0002-1648-0999","first_name":"Vlad","last_name":"Dziom"},{"last_name":"Dobretsova","first_name":"A. A.","full_name":"Dobretsova, A. A."},{"first_name":"N. N.","last_name":"Mikhailov","full_name":"Mikhailov, N. N."},{"last_name":"Kvon","first_name":"Z. D.","full_name":"Kvon, Z. D."},{"last_name":"Pimenov","first_name":"A.","full_name":"Pimenov, A."}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","volume":6,"article_processing_charge":"Yes","abstract":[{"text":"We report on dynamic Shubnikov–de Haas (SdH) oscillations that are measured in the optical response, subterahertz transmittance of two-dimensional systems, and reveal two distinct types of oscillation nodes: “universal” nodes at integer ratios of radiation and cyclotron frequencies and “tunable” nodes at positions sensitive to all parameters of the structure. The nodes in both real and imaginary parts of the measured complex transmittance are analyzed using a dynamic version of the static Lifshitz-Kosevich formula. These results demonstrate that the node structure of the dynamic SdH oscillations provides an all-optical access to quantization- and interaction-induced renormalization effects, in addition to parameters one can obtain from the static SdH oscillations.","lang":"eng"}],"publication_status":"published","external_id":{"arxiv":["2402.05879"]},"title":"Optical Shubnikov-de Haas oscillations in two-dimensional electron systems"},{"quality_controlled":"1","file":[{"date_created":"2024-05-21T09:35:14Z","file_name":"2024_PRXQuantum_Finzgar.pdf","content_type":"application/pdf","creator":"dernst","success":1,"file_id":"15409","relation":"main_file","checksum":"76bdf0b4dc06d59d073a57bd6957a96c","access_level":"open_access","file_size":2016085,"date_updated":"2024-05-21T09:35:14Z"}],"corr_author":"1","ddc":["530"],"has_accepted_license":"1","article_number":"020327","date_created":"2024-05-19T22:01:13Z","year":"2024","publication":"PRX Quantum","publication_identifier":{"eissn":["2691-3399"]},"doi":"10.1103/PRXQuantum.5.020327","issue":"2","publication_status":"published","external_id":{"arxiv":["2308.13607"]},"abstract":[{"text":"We propose and implement a family of quantum-informed recursive optimization (QIRO) algorithms for combinatorial optimization problems. Our approach leverages quantum resources to obtain information that is used in problem-specific classical reduction steps that recursively simplify the problem. These reduction steps address the limitations of the quantum component (e.g., locality) and ensure solution feasibility in constrained optimization problems. Additionally, we use backtracking techniques to further improve the performance of the algorithm without increasing the requirements on the quantum hardware. We showcase the capabilities of our approach by informing QIRO with correlations from classical simulations of shallow circuits of the quantum approximate optimization algorithm, solving instances of maximum independent set and maximum satisfiability problems with hundreds of variables. We also demonstrate how QIRO can be deployed on a neutral atom quantum processor to find large independent sets of graphs. In summary, our scheme achieves results comparable to classical heuristics even with relatively weak quantum resources. Furthermore, enhancing the quality of these quantum resources improves the performance of the algorithms. Notably, the modular nature of QIRO offers various avenues for modifications, positioning our work as a template for a broader class of hybrid quantum-classical algorithms for combinatorial optimization.","lang":"eng"}],"article_processing_charge":"Yes","title":"Quantum-informed recursive optimization algorithms","OA_place":"publisher","volume":5,"author":[{"full_name":"Finžgar, Jernej Rudi","last_name":"Finžgar","first_name":"Jernej Rudi"},{"first_name":"Aron","last_name":"Kerschbaumer","id":"ade85a9c-3200-11ee-973b-91c1eb240410","full_name":"Kerschbaumer, Aron"},{"full_name":"Schuetz, Martin J.A.","last_name":"Schuetz","first_name":"Martin J.A."},{"full_name":"Mendl, Christian B.","last_name":"Mendl","first_name":"Christian B."},{"full_name":"Katzgraber, Helmut G.","last_name":"Katzgraber","first_name":"Helmut G."}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"apa":"Finžgar, J. R., Kerschbaumer, A., Schuetz, M. J. A., Mendl, C. B., &#38; Katzgraber, H. G. (2024). Quantum-informed recursive optimization algorithms. <i>PRX Quantum</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PRXQuantum.5.020327\">https://doi.org/10.1103/PRXQuantum.5.020327</a>","chicago":"Finžgar, Jernej Rudi, Aron Kerschbaumer, Martin J.A. Schuetz, Christian B. Mendl, and Helmut G. Katzgraber. “Quantum-Informed Recursive Optimization Algorithms.” <i>PRX Quantum</i>. American Physical Society, 2024. <a href=\"https://doi.org/10.1103/PRXQuantum.5.020327\">https://doi.org/10.1103/PRXQuantum.5.020327</a>.","mla":"Finžgar, Jernej Rudi, et al. “Quantum-Informed Recursive Optimization Algorithms.” <i>PRX Quantum</i>, vol. 5, no. 2, 020327, American Physical Society, 2024, doi:<a href=\"https://doi.org/10.1103/PRXQuantum.5.020327\">10.1103/PRXQuantum.5.020327</a>.","ieee":"J. R. Finžgar, A. Kerschbaumer, M. J. A. Schuetz, C. B. Mendl, and H. G. Katzgraber, “Quantum-informed recursive optimization algorithms,” <i>PRX Quantum</i>, vol. 5, no. 2. American Physical Society, 2024.","short":"J.R. Finžgar, A. Kerschbaumer, M.J.A. Schuetz, C.B. Mendl, H.G. Katzgraber, PRX Quantum 5 (2024).","ista":"Finžgar JR, Kerschbaumer A, Schuetz MJA, Mendl CB, Katzgraber HG. 2024. Quantum-informed recursive optimization algorithms. PRX Quantum. 5(2), 020327.","ama":"Finžgar JR, Kerschbaumer A, Schuetz MJA, Mendl CB, Katzgraber HG. Quantum-informed recursive optimization algorithms. <i>PRX Quantum</i>. 2024;5(2). doi:<a href=\"https://doi.org/10.1103/PRXQuantum.5.020327\">10.1103/PRXQuantum.5.020327</a>"},"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"OA_type":"gold","status":"public","day":"01","DOAJ_listed":"1","file_date_updated":"2024-05-21T09:35:14Z","oa":1,"date_updated":"2025-05-14T09:29:40Z","arxiv":1,"publisher":"American Physical Society","department":[{"_id":"GradSch"}],"date_published":"2024-05-01T00:00:00Z","month":"05","language":[{"iso":"eng"}],"type":"journal_article","acknowledgement":"J.R.F. and A.K. thank Libor Caha and Alexander Kliesch for insightful discussions. The authors thank Lilly Palackal, Maximilian Passek, Carlos Riofrío, and Gili Rosenberg for thorough reviews of the manuscript, and the Amazon Braket, BMW, and QuEra teams for their support. C.M. thanks the Munich Quantum Valley initiative, which is supported by the Bavarian State Government with funds from the Hightech Agenda Bayern Plus. H.G.K. would like to thank Am Platzl 1A for providing the necessary environment for creative thinking. An open-source implementation of QIRO is available online [60].","oa_version":"Published Version","intvolume":"         5","article_type":"original","scopus_import":"1","_id":"15407"},{"scopus_import":"1","_id":"15408","intvolume":"       154","oa_version":"Published Version","article_type":"original","acknowledgement":"This work was funded by Deutsche Forschungsgemeinschaft, Germany, grants RO2133/ 9-1 and RO2133/ 9-2 in the setting of FOR2599 and TR156 project C11 (Project-ID 246807620–TRR 156) to A. Roers and Springboard-to-Postdoc grant of the Dresden International Graduate School for Biomedicine and Bioengineering (DIGS-BB), Dresden, Germany, and Fond zur Förderung der Wissenschaftlichen Forschung (FWF), Austria, Hertha Firnberg grant (project number T-1219) to A. Polikarpova.\r\nWe thank Dr Michael Gerlach, Core Facility Cellular Imaging, Faculty of Medicine Carl Gustav Carus, TU Dresden, for expert support of in vivo imaging experiments; Grace Wurigamule for help with 2-photon imaging and flow cytometric analysis of mouse skin; and Christina Hiller, Livia Schulze, Madelaine Rickauer, and Christa Haase for providing expert technical assistance.","type":"journal_article","date_published":"2024-09-01T00:00:00Z","language":[{"iso":"eng"}],"month":"09","date_updated":"2025-09-08T07:28:25Z","publisher":"Elsevier","department":[{"_id":"MiSi"}],"isi":1,"file_date_updated":"2025-01-13T10:55:28Z","oa":1,"day":"01","status":"public","tmp":{"short":"CC BY-NC-ND (4.0)","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","image":"/images/cc_by_nc_nd.png"},"OA_type":"hybrid","citation":{"mla":"Link, Kristina, et al. “Integrin Β1–Mediated Mast Cell Immune-Surveillance of Blood Vessel Content.” <i>Journal of Allergy and Clinical Immunology</i>, vol. 154, no. 3, Elsevier, 2024, pp. 745–53, doi:<a href=\"https://doi.org/10.1016/j.jaci.2024.03.022\">10.1016/j.jaci.2024.03.022</a>.","apa":"Link, K., Muhandes, L., Polikarpova, A., Lämmermann, T., Sixt, M. K., Fässler, R., &#38; Roers, A. (2024). Integrin β1–mediated mast cell immune-surveillance of blood vessel content. <i>Journal of Allergy and Clinical Immunology</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.jaci.2024.03.022\">https://doi.org/10.1016/j.jaci.2024.03.022</a>","chicago":"Link, Kristina, Lina Muhandes, Anastasia Polikarpova, Tim Lämmermann, Michael K Sixt, Reinhard Fässler, and Axel Roers. “Integrin Β1–Mediated Mast Cell Immune-Surveillance of Blood Vessel Content.” <i>Journal of Allergy and Clinical Immunology</i>. Elsevier, 2024. <a href=\"https://doi.org/10.1016/j.jaci.2024.03.022\">https://doi.org/10.1016/j.jaci.2024.03.022</a>.","ista":"Link K, Muhandes L, Polikarpova A, Lämmermann T, Sixt MK, Fässler R, Roers A. 2024. Integrin β1–mediated mast cell immune-surveillance of blood vessel content. Journal of Allergy and Clinical Immunology. 154(3), 745–753.","ama":"Link K, Muhandes L, Polikarpova A, et al. Integrin β1–mediated mast cell immune-surveillance of blood vessel content. <i>Journal of Allergy and Clinical Immunology</i>. 2024;154(3):745-753. doi:<a href=\"https://doi.org/10.1016/j.jaci.2024.03.022\">10.1016/j.jaci.2024.03.022</a>","ieee":"K. Link <i>et al.</i>, “Integrin β1–mediated mast cell immune-surveillance of blood vessel content,” <i>Journal of Allergy and Clinical Immunology</i>, vol. 154, no. 3. Elsevier, pp. 745–753, 2024.","short":"K. Link, L. Muhandes, A. Polikarpova, T. Lämmermann, M.K. Sixt, R. Fässler, A. Roers, Journal of Allergy and Clinical Immunology 154 (2024) 745–753."},"pmid":1,"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","author":[{"first_name":"Kristina","last_name":"Link","full_name":"Link, Kristina"},{"full_name":"Muhandes, Lina","last_name":"Muhandes","first_name":"Lina"},{"last_name":"Polikarpova","first_name":"Anastasia","full_name":"Polikarpova, Anastasia"},{"first_name":"Tim","last_name":"Lämmermann","full_name":"Lämmermann, Tim"},{"first_name":"Michael K","last_name":"Sixt","orcid":"0000-0002-6620-9179","id":"41E9FBEA-F248-11E8-B48F-1D18A9856A87","full_name":"Sixt, Michael K"},{"first_name":"Reinhard","last_name":"Fässler","full_name":"Fässler, Reinhard"},{"first_name":"Axel","last_name":"Roers","full_name":"Roers, Axel"}],"volume":154,"OA_place":"publisher","title":"Integrin β1–mediated mast cell immune-surveillance of blood vessel content","article_processing_charge":"Yes (in subscription journal)","page":"745-753","publication_status":"published","external_id":{"pmid":["38636606"],"isi":["001308886700001"]},"abstract":[{"text":"Background: IgE-mediated degranulation of mast cells (MCs) provides rapid protection against environmental hazards, including animal venoms. A fraction of tissue-resident MCs intimately associates with blood vessels. These perivascular MCs were reported to extend projections into the vessel lumen and to be the first MCs to acquire intravenously injected IgE, suggesting that IgE loading of MCs depends on their vascular association.\r\nObjective: We sought to elucidate the molecular basis of the MC–blood vessel interaction and to determine its relevance for IgE-mediated immune responses.\r\nMethods: We selectively inactivated the Itgb1 gene, encoding the β1 chain of integrin adhesion molecules (ITGB1), in MCs by conditional gene targeting in mice. We analyzed skin MCs for blood vessel association, surface IgE density, and capability to bind circulating antibody specific for MC surface molecules, as well as in vivo responses to antigen administered via different routes.\r\nResults: Lack of ITGB1 expression severely compromised MC–blood vessel association. ITGB1-deficient MCs showed normal densities of surface IgE but reduced binding of intravenously injected antibodies. While their capacity to degranulate in response to IgE ligation in vivo was unimpaired, anaphylactic responses to antigen circulating in the vasculature were largely abolished.\r\nConclusions: ITGB1-mediated association of MCs with blood vessels is key for MC immune surveillance of blood vessel content, but is dispensable for slow steady-state loading of endogenous IgE onto tissue-resident MCs.","lang":"eng"}],"publication_identifier":{"eissn":["1097-6825"],"issn":["0091-6749"]},"doi":"10.1016/j.jaci.2024.03.022","issue":"3","publication":"Journal of Allergy and Clinical Immunology","date_created":"2024-05-19T22:01:13Z","year":"2024","has_accepted_license":"1","ddc":["570"],"file":[{"file_size":1792425,"date_updated":"2025-01-13T10:55:28Z","access_level":"open_access","checksum":"6a5af05082e1869d7cad6406fa4eb76c","relation":"main_file","file_id":"18840","success":1,"creator":"dernst","file_name":"2024_JourAllergyClinicalImm_Link.pdf","content_type":"application/pdf","date_created":"2025-01-13T10:55:28Z"}],"quality_controlled":"1"},{"date_published":"2024-05-22T00:00:00Z","keyword":["nuclear magnetic resonance","NMR","cellwall","structural biology","spectroscopy"],"title":"Raw data to \"MAS NMR experiments of corynebacterial cell walls: complementary 1H- and CPMAS CryoProbe-enhanced 13C-detected experiments\"","month":"05","date_updated":"2025-09-09T12:01:41Z","publisher":"Institute of Science and Technology Austria","department":[{"_id":"PaSc"}],"article_processing_charge":"No","file_date_updated":"2024-05-22T12:17:10Z","abstract":[{"lang":"eng","text":"Bacterial cell walls are gigadalton-large cross-linked polymers with a wide range of motional amplitudes, including rather rigid as well as highly flexible parts. Magic-angle spinning NMR is a powerful method to obtain atomic-level information about intact cell walls. Here we investigate sensitivity and information content of different homonuclear 13C-13C and heteronuclear H-N, H-C and N-C correlation experiments. We demonstrate that a CPMAS CryoProbe yields ca. 8-fold increased signal-to-noise over a room-temperature probe, or a ca. 3-4-fold larger per-mass sensitivity. The increased sensitivity allowed to obtain high-resolution spectra even on intact bacteria. Moreover, we compare resolution and sensitivity of 1H MAS experiments obtained at 100 kHz vs. 55 kHz. Our study provides useful hints for choosing experiments to extract atomic-level details on cell-wall samples. "}],"oa":1,"related_material":{"record":[{"status":"public","id":"17291","relation":"used_in_publication"}]},"_id":"17042","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","author":[{"full_name":"Schanda, Paul","orcid":"0000-0002-9350-7606","id":"7B541462-FAF6-11E9-A490-E8DFE5697425","first_name":"Paul","last_name":"Schanda"}],"oa_version":"Published Version","type":"research_data","has_accepted_license":"1","ddc":["570"],"citation":{"mla":"Schanda, Paul. <i>Raw Data to “MAS NMR Experiments of Corynebacterial Cell Walls: Complementary 1H- and CPMAS CryoProbe-Enhanced 13C-Detected Experiments.”</i> Institute of Science and Technology Austria, 2024, doi:<a href=\"https://doi.org/10.15479/AT:ISTA:17042\">10.15479/AT:ISTA:17042</a>.","chicago":"Schanda, Paul. “Raw Data to ‘MAS NMR Experiments of Corynebacterial Cell Walls: Complementary 1H- and CPMAS CryoProbe-Enhanced 13C-Detected Experiments.’” Institute of Science and Technology Austria, 2024. <a href=\"https://doi.org/10.15479/AT:ISTA:17042\">https://doi.org/10.15479/AT:ISTA:17042</a>.","apa":"Schanda, P. (2024). Raw data to “MAS NMR experiments of corynebacterial cell walls: complementary 1H- and CPMAS CryoProbe-enhanced 13C-detected experiments.” Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT:ISTA:17042\">https://doi.org/10.15479/AT:ISTA:17042</a>","ama":"Schanda P. Raw data to “MAS NMR experiments of corynebacterial cell walls: complementary 1H- and CPMAS CryoProbe-enhanced 13C-detected experiments.” 2024. doi:<a href=\"https://doi.org/10.15479/AT:ISTA:17042\">10.15479/AT:ISTA:17042</a>","ista":"Schanda P. 2024. Raw data to ‘MAS NMR experiments of corynebacterial cell walls: complementary 1H- and CPMAS CryoProbe-enhanced 13C-detected experiments’, Institute of Science and Technology Austria, <a href=\"https://doi.org/10.15479/AT:ISTA:17042\">10.15479/AT:ISTA:17042</a>.","short":"P. Schanda, (2024).","ieee":"P. Schanda, “Raw data to ‘MAS NMR experiments of corynebacterial cell walls: complementary 1H- and CPMAS CryoProbe-enhanced 13C-detected experiments.’” Institute of Science and Technology Austria, 2024."},"corr_author":"1","file":[{"file_id":"17043","access_level":"open_access","checksum":"eb55f0988342d927702353b75e07edfa","relation":"main_file","date_updated":"2024-05-22T12:05:13Z","file_size":2132,"date_created":"2024-05-22T12:05:13Z","file_name":"Read_me.txt","content_type":"text/plain","success":1,"creator":"pschanda"},{"date_updated":"2024-05-22T12:17:10Z","file_size":755704888,"relation":"main_file","checksum":"3393592acaf5ee1e032052c236780914","access_level":"open_access","file_id":"17044","creator":"pschanda","success":1,"file_name":"raw_data_CryoMAS_cyronebacteria.zip","content_type":"application/zip","date_created":"2024-05-22T12:17:10Z"}],"doi":"10.15479/AT:ISTA:17042","status":"public","day":"22","date_created":"2024-05-22T12:04:54Z","year":"2024","contributor":[{"contributor_type":"data_collector","last_name":"Vallet","first_name":"Alicia"},{"first_name":"Isabel ","contributor_type":"data_collector","last_name":"Ayala"},{"contributor_type":"data_collector","last_name":"Perrone","first_name":"Barbara"},{"last_name":"Hassan","contributor_type":"data_collector","first_name":"Alia"},{"first_name":"Catherine","last_name":"Bougault","contributor_type":"data_collector"}],"tmp":{"short":"CC BY-NC-ND (4.0)","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","image":"/images/cc_by_nc_nd.png"}},{"scopus_import":"1","_id":"17047","oa_version":"Preprint","intvolume":"        13","article_type":"original","type":"journal_article","date_published":"2024-04-01T00:00:00Z","month":"04","language":[{"iso":"eng"}],"date_updated":"2026-04-07T13:02:12Z","publisher":"World Scientific Publishing","department":[{"_id":"GradSch"},{"_id":"LaEr"}],"arxiv":1,"isi":1,"oa":1,"day":"01","status":"public","ec_funded":1,"OA_type":"green","citation":{"ama":"Dubach G, Reker J. Dynamics of a rank-one multiplicative perturbation of a unitary matrix. <i>Random Matrices: Theory and Applications</i>. 2024;13(2). doi:<a href=\"https://doi.org/10.1142/s2010326324500072\">10.1142/s2010326324500072</a>","ista":"Dubach G, Reker J. 2024. Dynamics of a rank-one multiplicative perturbation of a unitary matrix. Random Matrices: Theory and Applications. 13(2), 2450007.","ieee":"G. Dubach and J. Reker, “Dynamics of a rank-one multiplicative perturbation of a unitary matrix,” <i>Random Matrices: Theory and Applications</i>, vol. 13, no. 2. World Scientific Publishing, 2024.","short":"G. Dubach, J. Reker, Random Matrices: Theory and Applications 13 (2024).","mla":"Dubach, Guillaume, and Jana Reker. “Dynamics of a Rank-One Multiplicative Perturbation of a Unitary Matrix.” <i>Random Matrices: Theory and Applications</i>, vol. 13, no. 2, 2450007, World Scientific Publishing, 2024, doi:<a href=\"https://doi.org/10.1142/s2010326324500072\">10.1142/s2010326324500072</a>.","apa":"Dubach, G., &#38; Reker, J. (2024). Dynamics of a rank-one multiplicative perturbation of a unitary matrix. <i>Random Matrices: Theory and Applications</i>. World Scientific Publishing. <a href=\"https://doi.org/10.1142/s2010326324500072\">https://doi.org/10.1142/s2010326324500072</a>","chicago":"Dubach, Guillaume, and Jana Reker. “Dynamics of a Rank-One Multiplicative Perturbation of a Unitary Matrix.” <i>Random Matrices: Theory and Applications</i>. World Scientific Publishing, 2024. <a href=\"https://doi.org/10.1142/s2010326324500072\">https://doi.org/10.1142/s2010326324500072</a>."},"project":[{"call_identifier":"H2020","name":"Random matrices beyond Wigner-Dyson-Mehta","_id":"62796744-2b32-11ec-9570-940b20777f1d","grant_number":"101020331"}],"related_material":{"record":[{"relation":"dissertation_contains","id":"17164","status":"public"}]},"author":[{"full_name":"Dubach, Guillaume","id":"D5C6A458-10C4-11EA-ABF4-A4B43DDC885E","orcid":"0000-0001-6892-8137","last_name":"Dubach","first_name":"Guillaume"},{"full_name":"Reker, Jana","id":"e796e4f9-dc8d-11ea-abe3-97e26a0323e9","first_name":"Jana","last_name":"Reker"}],"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","OA_place":"repository","volume":13,"title":"Dynamics of a rank-one multiplicative perturbation of a unitary matrix","article_processing_charge":"No","external_id":{"isi":["001229295200002"],"arxiv":["2212.14638"]},"publication_status":"published","abstract":[{"text":"We provide a dynamical study of a model of multiplicative perturbation of a unitary matrix introduced by Fyodorov. In particular, we identify a flow of deterministic domains that bound the spectrum with high probability, separating the outlier from the typical eigenvalues at all sub-critical timescales. These results are obtained under generic assumptions on U that hold for a variety of unitary random matrix models.","lang":"eng"}],"publication_identifier":{"issn":["2010-3263"],"eissn":["2010-3271"]},"doi":"10.1142/s2010326324500072","issue":"2","publication":"Random Matrices: Theory and Applications","date_created":"2024-05-23T08:31:57Z","year":"2024","article_number":"2450007","main_file_link":[{"url":" https://doi.org/10.48550/arXiv.2212.14638","open_access":"1"}],"corr_author":"1","quality_controlled":"1"},{"has_accepted_license":"1","ddc":["580"],"quality_controlled":"1","file":[{"file_id":"17056","checksum":"79aacbe31cf7626b78da062b1339bdb0","relation":"main_file","access_level":"open_access","file_size":20961818,"date_updated":"2024-05-27T07:43:46Z","date_created":"2024-05-27T07:43:46Z","file_name":"2024_NatureComm_Rajappa.pdf","content_type":"application/pdf","creator":"dernst","success":1}],"doi":"10.1038/s41467-024-48234-z","publication_identifier":{"eissn":["2041-1723"]},"publication":"Nature Communications","date_created":"2024-05-26T22:00:57Z","year":"2024","article_number":"3978","title":"The translocation of a chloride channel from the Golgi to the plasma membrane helps plants adapt to salt stress","article_processing_charge":"Yes","publication_status":"published","external_id":{"isi":["001221549300004"],"pmid":["38729926"]},"abstract":[{"text":"A key mechanism employed by plants to adapt to salinity stress involves maintaining ion homeostasis via the actions of ion transporters. While the function of cation transporters in maintaining ion homeostasis in plants has been extensively studied, little is known about the roles of their anion counterparts in this process. Here, we describe a mechanism of salt adaptation in plants. We characterized the chloride channel (CLC) gene AtCLCf, whose expression is regulated by WRKY transcription factor under salt stress in Arabidopsis thaliana. Loss-of-function atclcf seedlings show increased sensitivity to salt, whereas AtCLCf overexpression confers enhanced resistance to salt stress. Salt stress induces the translocation of GFP-AtCLCf fusion protein to the plasma membrane (PM). Blocking AtCLCf translocation using the exocytosis inhibitor brefeldin-A or mutating the small GTPase gene AtRABA1b/BEX5 (RAS GENES FROM RAT BRAINA1b homolog) increases salt sensitivity in plants. Electrophysiology and liposome-based assays confirm the Cl−/H+ antiport function of AtCLCf. Therefore, we have uncovered a mechanism of plant adaptation to salt stress involving the NaCl-induced translocation of AtCLCf to the PM, thus facilitating Cl− removal at the roots, and increasing the plant’s salinity tolerance.","lang":"eng"}],"pmid":1,"author":[{"first_name":"Sivamathini","last_name":"Rajappa","full_name":"Rajappa, Sivamathini"},{"full_name":"Krishnamurthy, Pannaga","first_name":"Pannaga","last_name":"Krishnamurthy"},{"full_name":"Huang, Hua","last_name":"Huang","first_name":"Hua"},{"last_name":"Yu","first_name":"Dejie","full_name":"Yu, Dejie"},{"full_name":"Friml, Jiří","id":"4159519E-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-8302-7596","first_name":"Jiří","last_name":"Friml"},{"full_name":"Xu, Jian","first_name":"Jian","last_name":"Xu"},{"first_name":"Prakash P.","last_name":"Kumar","full_name":"Kumar, Prakash P."}],"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","volume":15,"citation":{"chicago":"Rajappa, Sivamathini, Pannaga Krishnamurthy, Hua Huang, Dejie Yu, Jiří Friml, Jian Xu, and Prakash P. Kumar. “The Translocation of a Chloride Channel from the Golgi to the Plasma Membrane Helps Plants Adapt to Salt Stress.” <i>Nature Communications</i>. Springer Nature, 2024. <a href=\"https://doi.org/10.1038/s41467-024-48234-z\">https://doi.org/10.1038/s41467-024-48234-z</a>.","apa":"Rajappa, S., Krishnamurthy, P., Huang, H., Yu, D., Friml, J., Xu, J., &#38; Kumar, P. P. (2024). The translocation of a chloride channel from the Golgi to the plasma membrane helps plants adapt to salt stress. <i>Nature Communications</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41467-024-48234-z\">https://doi.org/10.1038/s41467-024-48234-z</a>","mla":"Rajappa, Sivamathini, et al. “The Translocation of a Chloride Channel from the Golgi to the Plasma Membrane Helps Plants Adapt to Salt Stress.” <i>Nature Communications</i>, vol. 15, 3978, Springer Nature, 2024, doi:<a href=\"https://doi.org/10.1038/s41467-024-48234-z\">10.1038/s41467-024-48234-z</a>.","ieee":"S. Rajappa <i>et al.</i>, “The translocation of a chloride channel from the Golgi to the plasma membrane helps plants adapt to salt stress,” <i>Nature Communications</i>, vol. 15. Springer Nature, 2024.","short":"S. Rajappa, P. Krishnamurthy, H. Huang, D. Yu, J. Friml, J. Xu, P.P. Kumar, Nature Communications 15 (2024).","ama":"Rajappa S, Krishnamurthy P, Huang H, et al. The translocation of a chloride channel from the Golgi to the plasma membrane helps plants adapt to salt stress. <i>Nature Communications</i>. 2024;15. doi:<a href=\"https://doi.org/10.1038/s41467-024-48234-z\">10.1038/s41467-024-48234-z</a>","ista":"Rajappa S, Krishnamurthy P, Huang H, Yu D, Friml J, Xu J, Kumar PP. 2024. The translocation of a chloride channel from the Golgi to the plasma membrane helps plants adapt to salt stress. Nature Communications. 15, 3978."},"status":"public","day":"10","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"date_published":"2024-05-10T00:00:00Z","language":[{"iso":"eng"}],"month":"05","date_updated":"2025-09-08T07:37:29Z","department":[{"_id":"JiFr"}],"publisher":"Springer Nature","isi":1,"file_date_updated":"2024-05-27T07:43:46Z","DOAJ_listed":"1","oa":1,"scopus_import":"1","_id":"17048","oa_version":"Published Version","intvolume":"        15","article_type":"original","acknowledgement":"The authors thank Drs. Akihiko Nakano and Tomohiro Uemura (RIKEN and Ochanomizu University, Japan) for providing plant material (seeds of GFP-RABA1bQ72L GFP-RABA1bS27N), Dr. Prakash Arumugam (SIFBI, A*STAR, Singapore) for providing the yeast strains used in this study, and Dr. Jobichen Chacko for help with homology model building. We thank Prof. Elliot Meyerowitz (Caltech) and Dr. On Sun Lau (NUS) for critical reading of our manuscript. The National University of Singapore provided partial financial support as grant number A−8000149-03-00, and PhD research scholarship to S.R.","type":"journal_article"},{"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","author":[{"first_name":"Maria","last_name":"Panoukidou","full_name":"Panoukidou, Maria"},{"full_name":"Weir, Simon","first_name":"Simon","last_name":"Weir"},{"last_name":"Sorichetti","first_name":"Valerio","full_name":"Sorichetti, Valerio","orcid":"0000-0002-9645-6576","id":"ef8a92cb-c7b6-11ec-8bea-e1fd5847bc5b"},{"last_name":"Fosado","first_name":"Yair Gutierrez","full_name":"Fosado, Yair Gutierrez"},{"first_name":"Martin","last_name":"Lenz","full_name":"Lenz, Martin"},{"full_name":"Michieletto, Davide","first_name":"Davide","last_name":"Michieletto"}],"volume":6,"title":"Runaway transition in irreversible polymer condensation with cyclization","article_processing_charge":"Yes","publication_status":"published","external_id":{"arxiv":["2210.14010"]},"abstract":[{"lang":"eng","text":"The process of polymer condensation, i.e., the formation of bonds between reactive end groups, is ubiquitous in both industry and biology. Here we study generic systems undergoing polymer condensation in competition with cyclization. Using a generalized Smoluchowski theory, molecular dynamics simulations and experiments with DNA and ATP-consuming T4 ligase, we find that this system displays a transition, from a ring-dominated regime with finite-length chains at infinite time to a linear-polymers-dominated one with chains that keep growing in time. Finally, we show that fluids prepared close to the transition may have widely different compositions and rheology at large condensation times."}],"publication_identifier":{"eissn":["2643-1564"]},"doi":"10.1103/PhysRevResearch.6.023189","issue":"2","publication":"Physical Review Research","date_created":"2024-05-26T22:00:58Z","year":"2024","article_number":"023189","has_accepted_license":"1","ddc":["530"],"file":[{"success":1,"creator":"dernst","date_created":"2024-05-27T06:37:01Z","content_type":"application/pdf","file_name":"2024_PhysicalReviewResearch_Panoukidou.pdf","access_level":"open_access","checksum":"63a962d49ef1e21a3367d265784df14b","relation":"main_file","file_size":1409416,"date_updated":"2024-05-27T06:37:01Z","file_id":"17055"}],"quality_controlled":"1","scopus_import":"1","_id":"17050","oa_version":"Published Version","intvolume":"         6","article_type":"original","acknowledgement":"D.M. acknowledges the support of the Royal Society via a University Research Fellowship. This project has received support from the European Research Council (ERC) under the European Union’s Horizon 2020 Research and Innovation Program (Grant Agreement No. 947918 to D.M. and No. 677532 to M.L.). The authors acknowledge insightful discussions with Daan Noordermeer and Antonio Valdes, who also kindly gifted us with the 1288 plasmid.","type":"journal_article","date_published":"2024-05-01T00:00:00Z","month":"05","language":[{"iso":"eng"}],"date_updated":"2025-05-14T09:32:40Z","department":[{"_id":"AnSa"}],"publisher":"American Physical Society","arxiv":1,"DOAJ_listed":"1","file_date_updated":"2024-05-27T06:37:01Z","oa":1,"status":"public","day":"01","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"citation":{"mla":"Panoukidou, Maria, et al. “Runaway Transition in Irreversible Polymer Condensation with Cyclization.” <i>Physical Review Research</i>, vol. 6, no. 2, 023189, American Physical Society, 2024, doi:<a href=\"https://doi.org/10.1103/PhysRevResearch.6.023189\">10.1103/PhysRevResearch.6.023189</a>.","apa":"Panoukidou, M., Weir, S., Sorichetti, V., Fosado, Y. G., Lenz, M., &#38; Michieletto, D. (2024). Runaway transition in irreversible polymer condensation with cyclization. <i>Physical Review Research</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevResearch.6.023189\">https://doi.org/10.1103/PhysRevResearch.6.023189</a>","chicago":"Panoukidou, Maria, Simon Weir, Valerio Sorichetti, Yair Gutierrez Fosado, Martin Lenz, and Davide Michieletto. “Runaway Transition in Irreversible Polymer Condensation with Cyclization.” <i>Physical Review Research</i>. American Physical Society, 2024. <a href=\"https://doi.org/10.1103/PhysRevResearch.6.023189\">https://doi.org/10.1103/PhysRevResearch.6.023189</a>.","ista":"Panoukidou M, Weir S, Sorichetti V, Fosado YG, Lenz M, Michieletto D. 2024. Runaway transition in irreversible polymer condensation with cyclization. Physical Review Research. 6(2), 023189.","ama":"Panoukidou M, Weir S, Sorichetti V, Fosado YG, Lenz M, Michieletto D. Runaway transition in irreversible polymer condensation with cyclization. <i>Physical Review Research</i>. 2024;6(2). doi:<a href=\"https://doi.org/10.1103/PhysRevResearch.6.023189\">10.1103/PhysRevResearch.6.023189</a>","short":"M. Panoukidou, S. Weir, V. Sorichetti, Y.G. Fosado, M. Lenz, D. Michieletto, Physical Review Research 6 (2024).","ieee":"M. Panoukidou, S. Weir, V. Sorichetti, Y. G. Fosado, M. Lenz, and D. Michieletto, “Runaway transition in irreversible polymer condensation with cyclization,” <i>Physical Review Research</i>, vol. 6, no. 2. American Physical Society, 2024."}},{"oa":1,"isi":1,"date_updated":"2025-09-08T07:35:40Z","department":[{"_id":"KrPi"}],"publisher":"Springer Nature","date_published":"2024-05-01T00:00:00Z","month":"05","language":[{"iso":"eng"}],"type":"conference","acknowledgement":"We thank the Eurocrypt reviewers for their thorough review and for pointing out related works. This research was funded in whole or in part by the Austrian Science Fund (FWF) 10.55776/F85.","oa_version":"Preprint","intvolume":"     14653","scopus_import":"1","_id":"17051","project":[{"_id":"34a34d57-11ca-11ed-8bc3-a2688a8724e1","grant_number":"F8509","name":"Security and Privacy by Design for Complex Systems"}],"citation":{"ieee":"B. Auerbach, C. U. Günther, and K. Z. Pietrzak, “Trapdoor memory-hard functions,” in <i>43rd Annual International Conference on the Theory and Applications of Cryptographic Techniques</i>, Zurich, Switzerland, 2024, vol. 14653, pp. 315–344.","short":"B. Auerbach, C.U. Günther, K.Z. Pietrzak, in:, 43rd Annual International Conference on the Theory and Applications of Cryptographic Techniques, Springer Nature, 2024, pp. 315–344.","ama":"Auerbach B, Günther CU, Pietrzak KZ. Trapdoor memory-hard functions. In: <i>43rd Annual International Conference on the Theory and Applications of Cryptographic Techniques</i>. Vol 14653. Springer Nature; 2024:315-344. doi:<a href=\"https://doi.org/10.1007/978-3-031-58734-4_11\">10.1007/978-3-031-58734-4_11</a>","ista":"Auerbach B, Günther CU, Pietrzak KZ. 2024. Trapdoor memory-hard functions. 43rd Annual International Conference on the Theory and Applications of Cryptographic Techniques. EUROCRYPT: Theory and Applications of Cryptographic Techniques, LNCS, vol. 14653, 315–344.","apa":"Auerbach, B., Günther, C. U., &#38; Pietrzak, K. Z. (2024). Trapdoor memory-hard functions. In <i>43rd Annual International Conference on the Theory and Applications of Cryptographic Techniques</i> (Vol. 14653, pp. 315–344). Zurich, Switzerland: Springer Nature. <a href=\"https://doi.org/10.1007/978-3-031-58734-4_11\">https://doi.org/10.1007/978-3-031-58734-4_11</a>","chicago":"Auerbach, Benedikt, Christoph Ullrich Günther, and Krzysztof Z Pietrzak. “Trapdoor Memory-Hard Functions.” In <i>43rd Annual International Conference on the Theory and Applications of Cryptographic Techniques</i>, 14653:315–44. Springer Nature, 2024. <a href=\"https://doi.org/10.1007/978-3-031-58734-4_11\">https://doi.org/10.1007/978-3-031-58734-4_11</a>.","mla":"Auerbach, Benedikt, et al. “Trapdoor Memory-Hard Functions.” <i>43rd Annual International Conference on the Theory and Applications of Cryptographic Techniques</i>, vol. 14653, Springer Nature, 2024, pp. 315–44, doi:<a href=\"https://doi.org/10.1007/978-3-031-58734-4_11\">10.1007/978-3-031-58734-4_11</a>."},"day":"01","status":"public","alternative_title":["LNCS"],"external_id":{"isi":["001274940200011"]},"publication_status":"published","abstract":[{"text":"Memory-hard functions (MHF) are functions whose evaluation provably requires\r\na lot of memory. While MHFs are an unkeyed primitive, it is natural to consider the\r\nnotion of trapdoor MHFs (TMHFs). A TMHF is like an MHF, but when sampling\r\nthe public parameters one also samples a trapdoor which allows evaluating the\r\nfunction much cheaper.\r\nBiryukov and Perrin (Asiacrypt’17) were the first to consider TMHFs and put\r\nforth a candidate TMHF construction called Diodon that is based on the Scrypt\r\nMHF (Percival, BSDCan’09). To allow for a trapdoor, Scrypt’s initial hash chain\r\nis replaced by a sequence of squares in a group of unknown order where the order of\r\nthe group is the trapdoor. For a length n sequence of squares and a group of order\r\nN, Diodon’s cumulative memory complexity (CMC) is O(n2log N) without the\r\ntrapdoor and O(n log(n) log(N)2) with knowledge of it.\r\nWhile Scrypt is proven to be optimally memory-hard in the random oracle\r\nmodel (Alwen et al., Eurocrypt’17), Diodon’s memory-hardness has not been\r\nproven so far. In this work, we fill this gap by rigorously analyzing a specific\r\ninstantiation of Diodon. We show that its CMC is lower bounded by Ω( n2log nlog N)\r\nwhich almost matches the upper bound. Our proof is based Alwen et al.’s lower\r\nbound on Scrypt’s CMC but requires non-trivial modifications due to the algebraic\r\nstructure of Diodon. Most importantly, our analysis involves a more elaborate\r\ncompression argument and a solvability criterion for certain systems of Diophantine\r\nequations.","lang":"eng"}],"article_processing_charge":"No","page":"315-344","title":"Trapdoor memory-hard functions","volume":14653,"author":[{"full_name":"Auerbach, Benedikt","id":"D33D2B18-E445-11E9-ABB7-15F4E5697425","orcid":"0000-0002-7553-6606","last_name":"Auerbach","first_name":"Benedikt"},{"last_name":"Günther","first_name":"Christoph Ullrich","full_name":"Günther, Christoph Ullrich","id":"ec98511c-eb8e-11eb-b029-edd25d7271a1"},{"orcid":"0000-0002-9139-1654","id":"3E04A7AA-F248-11E8-B48F-1D18A9856A87","full_name":"Pietrzak, Krzysztof Z","first_name":"Krzysztof Z","last_name":"Pietrzak"}],"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","quality_controlled":"1","corr_author":"1","conference":{"start_date":"2024-05-26","name":"EUROCRYPT: Theory and Applications of Cryptographic Techniques","end_date":"2024-05-30","location":"Zurich, Switzerland"},"main_file_link":[{"url":"https://eprint.iacr.org/2024/312","open_access":"1"}],"date_created":"2024-05-26T22:00:58Z","year":"2024","publication":"43rd Annual International Conference on the Theory and Applications of Cryptographic Techniques","doi":"10.1007/978-3-031-58734-4_11","publication_identifier":{"issn":["0302-9743"],"isbn":["9783031587337"],"eissn":["1611-3349"]}},{"article_processing_charge":"Yes","publication_status":"published","abstract":[{"text":"Photoisomerization and photoluminescence are two distinct energy dissipation pathways in light-driven molecular motors. The photoisomerization properties of discrete molecular motors have been well established in solution, but their photoluminescent properties have been rarely reported—especially in aggregates. Here, it is shown that an overcrowded alkene-based molecular motor exhibits distinct dynamic properties in solution and aggregate states, for example, gel and solid states. Despite the poor emissive properties of molecular motors in solution, a bright emission is observed in the aggregate states, including in gel and the crystalline solid. The emission wavelength is highly dependent on the nature of the supramolecular packing and order in the aggregates. As a result, the fluorescent color can be readily tuned reversibly via mechanical grinding and vapor fuming, which provides a new platform for developing multi-stimuli functional materials.","lang":"eng"}],"title":"Multi-state photoluminescent properties of an overcrowded alkene-based molecular motor in aggregates","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","author":[{"last_name":"Shan","first_name":"Yahan","full_name":"Shan, Yahan"},{"full_name":"Sheng, Jinyu","id":"639f0526-27c9-11ee-95a6-966cd7f102d8","first_name":"Jinyu","last_name":"Sheng"},{"last_name":"Zhang","first_name":"Qi","full_name":"Zhang, Qi"},{"first_name":"Marc C.A.","last_name":"Stuart","full_name":"Stuart, Marc C.A."},{"last_name":"Qu","first_name":"Da Hui","full_name":"Qu, Da Hui"},{"first_name":"Ben L.","last_name":"Feringa","full_name":"Feringa, Ben L."}],"OA_place":"publisher","volume":5,"quality_controlled":"1","file":[{"access_level":"open_access","checksum":"1e79dc81d0edf0b441ef661a1890bbf5","relation":"main_file","date_updated":"2025-01-09T09:38:51Z","file_size":2299084,"file_id":"18804","success":1,"creator":"dernst","date_created":"2025-01-09T09:38:51Z","file_name":"2024_Aggregate_Shan.pdf","content_type":"application/pdf"}],"has_accepted_license":"1","ddc":["540"],"date_created":"2024-05-26T22:00:58Z","year":"2024","article_number":"e584","publication_identifier":{"issn":["2766-8541"],"eissn":["2692-4560"]},"doi":"10.1002/agt2.584","issue":"5","publication":"Aggregate","file_date_updated":"2025-01-09T09:38:51Z","oa":1,"date_published":"2024-10-01T00:00:00Z","month":"10","language":[{"iso":"eng"}],"date_updated":"2025-01-09T09:41:53Z","department":[{"_id":"RaKl"}],"publisher":"Wiley","intvolume":"         5","oa_version":"Published Version","article_type":"original","type":"journal_article","acknowledgement":"This work was supported by the National Natural Science Foundation of China (grant nos. 22220102004, 22025503), Shanghai Municipal Science and Technology Major Project (grant no. 2018SHZDZX03), the Innovation Program of Shanghai Municipal Education Commission (2023ZKZD40), the Fundamental Research Funds for the Central Universities, the Program of Introducing Talents of Discipline to Universities (grant no. B16017), Science and Technology Commission of Shanghai Municipality (grant no. 21JC1401700), and the Starry Night Science Fund of Zhejiang University Shanghai Institute for Advanced Study (grant no. SN-ZJU-SIAS-006), China Scholarship Council (CSC PhD Fellowship No. 202006745016 to Yahan Shan). The authors gratefully acknowledge financial support from the Dutch Ministry of Education, Culture and Science (gravitation program no. 024.001.035 to Ben L. Feringa). The authors thank Dr. Youxin Fu and Dr. Alexander Ryabchun for the help with fluorescence quantum yield measurement, Cristina Nitu for the help with photoisomerzation quantum yield measurement, Prof. Wesley R. Browne for the help with fluorescence lifetime measurement, and Dr. Jianyu Zhang for fruitful discussion and revising the manuscript.","scopus_import":"1","_id":"17054","citation":{"chicago":"Shan, Yahan, Jinyu Sheng, Qi Zhang, Marc C.A. Stuart, Da Hui Qu, and Ben L. Feringa. “Multi-State Photoluminescent Properties of an Overcrowded Alkene-Based Molecular Motor in Aggregates.” <i>Aggregate</i>. Wiley, 2024. <a href=\"https://doi.org/10.1002/agt2.584\">https://doi.org/10.1002/agt2.584</a>.","apa":"Shan, Y., Sheng, J., Zhang, Q., Stuart, M. C. A., Qu, D. H., &#38; Feringa, B. L. (2024). Multi-state photoluminescent properties of an overcrowded alkene-based molecular motor in aggregates. <i>Aggregate</i>. Wiley. <a href=\"https://doi.org/10.1002/agt2.584\">https://doi.org/10.1002/agt2.584</a>","mla":"Shan, Yahan, et al. “Multi-State Photoluminescent Properties of an Overcrowded Alkene-Based Molecular Motor in Aggregates.” <i>Aggregate</i>, vol. 5, no. 5, e584, Wiley, 2024, doi:<a href=\"https://doi.org/10.1002/agt2.584\">10.1002/agt2.584</a>.","short":"Y. Shan, J. Sheng, Q. Zhang, M.C.A. Stuart, D.H. Qu, B.L. Feringa, Aggregate 5 (2024).","ieee":"Y. Shan, J. Sheng, Q. Zhang, M. C. A. Stuart, D. H. Qu, and B. L. Feringa, “Multi-state photoluminescent properties of an overcrowded alkene-based molecular motor in aggregates,” <i>Aggregate</i>, vol. 5, no. 5. Wiley, 2024.","ista":"Shan Y, Sheng J, Zhang Q, Stuart MCA, Qu DH, Feringa BL. 2024. Multi-state photoluminescent properties of an overcrowded alkene-based molecular motor in aggregates. Aggregate. 5(5), e584.","ama":"Shan Y, Sheng J, Zhang Q, Stuart MCA, Qu DH, Feringa BL. Multi-state photoluminescent properties of an overcrowded alkene-based molecular motor in aggregates. <i>Aggregate</i>. 2024;5(5). doi:<a href=\"https://doi.org/10.1002/agt2.584\">10.1002/agt2.584</a>"},"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"OA_type":"gold","status":"public","day":"01"}]