---
_id: '15271'
abstract:
- lang: eng
text: 'We settle the complexity of the (∆ + 1)-coloring and (∆ + 1)-list coloring
problems intheCONGESTED CLIQUEmodel by presenting a simpledeterministicalgorithm
for both problemsrunning in a constant number of rounds. This matches the complexity
of the recent breakthroughrandomizedconstant-round (∆ + 1)-list coloring algorithm
due to Chang et al. [Proceedings of the38th ACM Symposium on Principles of Distributed Computing, 2019] and significantly improvesupon
the state-of-the-artO(log ∆)-round deterministic (∆ + 1)-coloring bound of Parter
[Proceed-ings of the 45th Annual International Colloquium on Automata, Languages
and Programming]. Aremarkable property of our algorithm is its simplicity. Whereas
the state-of-the-artrandomizedal-gorithms for this problem are based on the quite
involved local coloring algorithm of Chang, Li, andPettie [Proceedings of the
50th Annual ACM SIGACT Symposium on Theory of Computing, 2018],our algorithm can
be described in just a few lines. At a high level, it applies a careful derandomiza-tion
of a recursive procedure which partitions the nodes and their respective palettes
into separatebins. We show that afterO(1) recursion steps, the remaining uncolored
subgraph within each bin haslinear size and thus can be solved locally by collecting
it to a single node. This algorithm can alsobe implemented in the massively parallel
computation (MPC) model provided that each machine haslinear (inn, the number
of nodes in the input graph) space. We also show an extension of our algo-rithm
to theMPCregime, in which machines havesublinearspace: we present the first deterministic(∆
+ 1)-list coloring algorithm designed for sublinear-spaceMPC, which runs inO(log
∆ + log logn)rounds.'
acknowledgement: The first author was partially supported by the Centre for Discrete Mathematics
and its Applications, by the IBM Faculty Award, and by the EPSRC award EP/N011163/1. The
second author was partially supported by the European Union’s Horizon 2020 research
and innovation program under the Marie Sklodowska-Curie grant agreement 754411. The
first and third authors were partially supported by a Weizmann-UK Making Connections
grant.
article_processing_charge: No
article_type: original
author:
- first_name: Artur
full_name: Czumaj, Artur
last_name: Czumaj
- first_name: Peter
full_name: Davies, Peter
id: 11396234-BB50-11E9-B24C-90FCE5697425
last_name: Davies
orcid: 0000-0002-5646-9524
- first_name: Merav
full_name: Parter, Merav
last_name: Parter
citation:
ama: Czumaj A, Davies P, Parter M. Simple, deterministic, constant-round coloring
in congested clique and MPC. SIAM Journal on Computing. 2021;50(5):1603-1626.
doi:10.1137/20m1366502
apa: Czumaj, A., Davies, P., & Parter, M. (2021). Simple, deterministic, constant-round
coloring in congested clique and MPC. SIAM Journal on Computing. Society
for Industrial and Applied Mathematics. https://doi.org/10.1137/20m1366502
chicago: Czumaj, Artur, Peter Davies, and Merav Parter. “Simple, Deterministic,
Constant-Round Coloring in Congested Clique and MPC.” SIAM Journal on Computing.
Society for Industrial and Applied Mathematics, 2021. https://doi.org/10.1137/20m1366502.
ieee: A. Czumaj, P. Davies, and M. Parter, “Simple, deterministic, constant-round
coloring in congested clique and MPC,” SIAM Journal on Computing, vol.
50, no. 5. Society for Industrial and Applied Mathematics, pp. 1603–1626, 2021.
ista: Czumaj A, Davies P, Parter M. 2021. Simple, deterministic, constant-round
coloring in congested clique and MPC. SIAM Journal on Computing. 50(5), 1603–1626.
mla: Czumaj, Artur, et al. “Simple, Deterministic, Constant-Round Coloring in Congested
Clique and MPC.” SIAM Journal on Computing, vol. 50, no. 5, Society for
Industrial and Applied Mathematics, 2021, pp. 1603–26, doi:10.1137/20m1366502.
short: A. Czumaj, P. Davies, M. Parter, SIAM Journal on Computing 50 (2021) 1603–1626.
date_created: 2024-04-03T07:53:22Z
date_published: 2021-01-01T00:00:00Z
date_updated: 2025-09-10T10:14:11Z
day: '01'
department:
- _id: DaAl
doi: 10.1137/20m1366502
ec_funded: 1
external_id:
isi:
- '000713008600004'
intvolume: ' 50'
isi: 1
issue: '5'
keyword:
- General Mathematics
- General Computer Science
language:
- iso: eng
month: '01'
oa_version: None
page: 1603-1626
project:
- _id: 260C2330-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '754411'
name: ISTplus - Postdoctoral Fellowships
publication: SIAM Journal on Computing
publication_identifier:
eissn:
- 1095-7111
issn:
- 0097-5397
publication_status: published
publisher: Society for Industrial and Applied Mathematics
quality_controlled: '1'
scopus_import: '1'
status: public
title: Simple, deterministic, constant-round coloring in congested clique and MPC
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 50
year: '2021'
...
---
_id: '15272'
abstract:
- lang: eng
text: The assembly of neuronal circuits involves the migrations of neurons from
their place of birth to their final location in the nervous system, as well as
the coordinated growth and patterning of axons and dendrites. In screens for genes
required for patterning of the nervous system, we identified the catp-8/P5A-ATPase
as an important regulator of neural patterning. P5A-ATPases are part of the P-type
ATPases, a family of proteins known to serve a conserved function as transporters
of ions, lipids and polyamines in unicellular eukaryotes, plants, and humans.
While the function of many P-type ATPases is relatively well understood, the function
of P5A-ATPases in metazoans remained elusive. We show here, that the Caenorhabditis
elegans ortholog catp-8/P5A-ATPase is
required for defined aspects of nervous system development. Specifically, the
catp-8/P5A-ATPase serves functions in shaping the elaborately
sculpted dendritic trees of somatosensory PVD neurons. Moreover, catp-8/P5A-ATPase
is required for axonal guidance and repulsion at the midline, as well as embryonic
and postembryonic neuronal migrations. Interestingly, not all axons at the midline
require catp-8/P5A-ATPase, although the axons run in
the same fascicles and navigate the same space. Similarly, not all neuronal migrations
require catp-8/P5A-ATPase. A CATP-8/P5A-ATPase reporter
is localized to the ER in most, if not all, tissues and catp-8/P5A-ATPase
can function both cell-autonomously and non-autonomously to regulate neuronal
development. Genetic analyses establish that catp-8/P5A-ATPase
can function in multiple pathways, including the Menorin pathway, previously shown
to control dendritic patterning in PVD, and Wnt signaling, which functions to
control neuronal migrations. Lastly, we show that catp-8/P5A-ATPase
is required for localizing select transmembrane proteins necessary for dendrite
morphogenesis. Collectively, our studies suggest that catp-8/P5A-ATPase
serves diverse, yet specific, roles in different genetic pathways and may be involved
in the regulation or localization of transmembrane and secreted proteins to specific
subcellular compartments.
article_number: e1009475
article_processing_charge: No
article_type: original
author:
- first_name: Leo T. H.
full_name: Tang, Leo T. H.
last_name: Tang
- first_name: Meera
full_name: Trivedi, Meera
last_name: Trivedi
- first_name: Jenna
full_name: Freund, Jenna
last_name: Freund
- first_name: Christopher J.
full_name: Salazar, Christopher J.
last_name: Salazar
- first_name: Maisha
full_name: Rahman, Maisha
last_name: Rahman
- first_name: Nelson
full_name: Ramirez, Nelson
id: 39831956-E4FE-11E9-85DE-0DC7E5697425
last_name: Ramirez
- first_name: Garrett
full_name: Lee, Garrett
last_name: Lee
- first_name: Yu
full_name: Wang, Yu
last_name: Wang
- first_name: Barth D.
full_name: Grant, Barth D.
last_name: Grant
- first_name: Hannes E.
full_name: Bülow, Hannes E.
last_name: Bülow
citation:
ama: Tang LTH, Trivedi M, Freund J, et al. The CATP-8/P5A-type ATPase functions
in multiple pathways during neuronal patterning. PLOS Genetics. 2021;17(7).
doi:10.1371/journal.pgen.1009475
apa: Tang, L. T. H., Trivedi, M., Freund, J., Salazar, C. J., Rahman, M., Ramirez,
N., … Bülow, H. E. (2021). The CATP-8/P5A-type ATPase functions in multiple pathways
during neuronal patterning. PLOS Genetics. Public Library of Science. https://doi.org/10.1371/journal.pgen.1009475
chicago: Tang, Leo T. H., Meera Trivedi, Jenna Freund, Christopher J. Salazar, Maisha
Rahman, Nelson Ramirez, Garrett Lee, Yu Wang, Barth D. Grant, and Hannes E. Bülow.
“The CATP-8/P5A-Type ATPase Functions in Multiple Pathways during Neuronal Patterning.”
PLOS Genetics. Public Library of Science, 2021. https://doi.org/10.1371/journal.pgen.1009475.
ieee: L. T. H. Tang et al., “The CATP-8/P5A-type ATPase functions in multiple
pathways during neuronal patterning,” PLOS Genetics, vol. 17, no. 7. Public
Library of Science, 2021.
ista: Tang LTH, Trivedi M, Freund J, Salazar CJ, Rahman M, Ramirez N, Lee G, Wang
Y, Grant BD, Bülow HE. 2021. The CATP-8/P5A-type ATPase functions in multiple
pathways during neuronal patterning. PLOS Genetics. 17(7), e1009475.
mla: Tang, Leo T. H., et al. “The CATP-8/P5A-Type ATPase Functions in Multiple Pathways
during Neuronal Patterning.” PLOS Genetics, vol. 17, no. 7, e1009475, Public
Library of Science, 2021, doi:10.1371/journal.pgen.1009475.
short: L.T.H. Tang, M. Trivedi, J. Freund, C.J. Salazar, M. Rahman, N. Ramirez,
G. Lee, Y. Wang, B.D. Grant, H.E. Bülow, PLOS Genetics 17 (2021).
date_created: 2024-04-03T07:57:12Z
date_published: 2021-07-01T00:00:00Z
date_updated: 2024-04-10T08:57:16Z
day: '01'
ddc:
- '570'
department:
- _id: MaDe
doi: 10.1371/journal.pgen.1009475
external_id:
pmid:
- '34197450'
file:
- access_level: open_access
checksum: 7352b195e4db6d404f702fe6ad8b55ad
content_type: application/pdf
creator: dernst
date_created: 2024-04-10T08:53:43Z
date_updated: 2024-04-10T08:53:43Z
file_id: '15308'
file_name: 2021_PlosGenetics_Tang.pdf
file_size: 4224934
relation: main_file
success: 1
file_date_updated: 2024-04-10T08:53:43Z
has_accepted_license: '1'
intvolume: ' 17'
issue: '7'
keyword:
- Cancer Research
- Genetics (clinical)
- Genetics
- Molecular Biology
- Ecology
- Evolution
- Behavior and Systematics
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
pmid: 1
publication: PLOS Genetics
publication_identifier:
issn:
- 1553-7404
publication_status: published
publisher: Public Library of Science
quality_controlled: '1'
status: public
title: The CATP-8/P5A-type ATPase functions in multiple pathways during neuronal patterning
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 17
year: '2021'
...
---
_id: '15273'
abstract:
- lang: eng
text: Synapses of glutamatergic mossy fibers (MFs) onto cerebellar unipolar brush
cells (UBCs) generate slow excitatory (ON) or inhibitory (OFF) postsynaptic responses
dependent on the complement of glutamate receptors expressed on the UBC’s large
dendritic brush. Using mouse brain slice recording and computational modeling
of synaptic transmission, we found that substantial glutamate is maintained in
the UBC synaptic cleft, sufficient to modify spontaneous firing in OFF UBCs and
tonically desensitize AMPARs of ON UBCs. The source of this ambient glutamate
was spontaneous, spike-independent exocytosis from the MF terminal, and its level
was dependent on activity of glutamate transporters EAAT1–2. Increasing levels
of ambient glutamate shifted the polarity of evoked synaptic responses in ON UBCs
and altered the phase of responses to in vivo-like synaptic activity. Unlike classical
fast synapses, receptors at the UBC synapse are virtually always exposed to a
significant level of glutamate, which varies in a graded manner during transmission.
article_number: e63819
article_processing_charge: Yes
article_type: original
author:
- first_name: Timothy S
full_name: Balmer, Timothy S
last_name: Balmer
- first_name: Carolina
full_name: Borges Merjane, Carolina
id: 4305C450-F248-11E8-B48F-1D18A9856A87
last_name: Borges Merjane
orcid: 0000-0003-0005-401X
- first_name: Laurence O
full_name: Trussell, Laurence O
last_name: Trussell
citation:
ama: Balmer TS, Borges Merjane C, Trussell LO. Incomplete removal of extracellular
glutamate controls synaptic transmission and integration at a cerebellar synapse.
eLife. 2021;10. doi:10.7554/elife.63819
apa: Balmer, T. S., Borges Merjane, C., & Trussell, L. O. (2021). Incomplete
removal of extracellular glutamate controls synaptic transmission and integration
at a cerebellar synapse. ELife. eLife Sciences Publications. https://doi.org/10.7554/elife.63819
chicago: Balmer, Timothy S, Carolina Borges Merjane, and Laurence O Trussell. “Incomplete
Removal of Extracellular Glutamate Controls Synaptic Transmission and Integration
at a Cerebellar Synapse.” ELife. eLife Sciences Publications, 2021. https://doi.org/10.7554/elife.63819.
ieee: T. S. Balmer, C. Borges Merjane, and L. O. Trussell, “Incomplete removal of
extracellular glutamate controls synaptic transmission and integration at a cerebellar
synapse,” eLife, vol. 10. eLife Sciences Publications, 2021.
ista: Balmer TS, Borges Merjane C, Trussell LO. 2021. Incomplete removal of extracellular
glutamate controls synaptic transmission and integration at a cerebellar synapse.
eLife. 10, e63819.
mla: Balmer, Timothy S., et al. “Incomplete Removal of Extracellular Glutamate Controls
Synaptic Transmission and Integration at a Cerebellar Synapse.” ELife,
vol. 10, e63819, eLife Sciences Publications, 2021, doi:10.7554/elife.63819.
short: T.S. Balmer, C. Borges Merjane, L.O. Trussell, ELife 10 (2021).
date_created: 2024-04-03T07:58:11Z
date_published: 2021-02-22T00:00:00Z
date_updated: 2024-04-09T11:15:01Z
day: '22'
ddc:
- '570'
department:
- _id: PeJo
doi: 10.7554/elife.63819
external_id:
pmid:
- '33616036'
file:
- access_level: open_access
checksum: bbd4de2e54b7fbc11fba14f59e87fe3f
content_type: application/pdf
creator: dernst
date_created: 2024-04-09T11:13:07Z
date_updated: 2024-04-09T11:13:07Z
file_id: '15307'
file_name: 2021_eLife_Balmer.pdf
file_size: 6997954
relation: main_file
success: 1
file_date_updated: 2024-04-09T11:13:07Z
has_accepted_license: '1'
intvolume: ' 10'
keyword:
- General Immunology and Microbiology
- General Biochemistry
- Genetics and Molecular Biology
- General Medicine
- General Neuroscience
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
pmid: 1
publication: eLife
publication_identifier:
issn:
- 2050-084X
publication_status: published
publisher: eLife Sciences Publications
quality_controlled: '1'
status: public
title: Incomplete removal of extracellular glutamate controls synaptic transmission
and integration at a cerebellar synapse
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 10
year: '2021'
...
---
_id: '15274'
abstract:
- lang: eng
text: Copper (Cu) is a redox-active micronutrient that is both essential and toxic.
Its cellular homeostasis is critical for supporting cuproprotein maturation while
avoiding excessive oxidative stress. The Cu importer CcoA is the prototype of
the widespread CalT subfamily of the MFS-type transporters. Hence, understanding
its molecular mechanism of function is significant. Here, we show that CcoA undergoes
a thiol:disulfide oxidoreduction cycle, which is important for its Cu import activity.
article_number: e01567
article_processing_charge: No
article_type: original
author:
- first_name: Bahia
full_name: Khalfaoui-Hassani, Bahia
last_name: Khalfaoui-Hassani
- first_name: Petru Iulian
full_name: Trasnea, Petru Iulian
id: D560034C-10C4-11EA-ABF4-A4B43DDC885E
last_name: Trasnea
- first_name: Stefan
full_name: Steimle, Stefan
last_name: Steimle
- first_name: Hans-Georg
full_name: Koch, Hans-Georg
last_name: Koch
- first_name: Fevzi
full_name: Daldal, Fevzi
last_name: Daldal
citation:
ama: Khalfaoui-Hassani B, Trasnea PI, Steimle S, Koch H-G, Daldal F. Cysteine mutants
of the major facilitator superfamily-type transporter CcoA provide insight into
copper import. mBio. 2021;12(4). doi:10.1128/mbio.01567-21
apa: Khalfaoui-Hassani, B., Trasnea, P. I., Steimle, S., Koch, H.-G., & Daldal,
F. (2021). Cysteine mutants of the major facilitator superfamily-type transporter
CcoA provide insight into copper import. MBio. American Society for Microbiology.
https://doi.org/10.1128/mbio.01567-21
chicago: Khalfaoui-Hassani, Bahia, Petru Iulian Trasnea, Stefan Steimle, Hans-Georg
Koch, and Fevzi Daldal. “Cysteine Mutants of the Major Facilitator Superfamily-Type
Transporter CcoA Provide Insight into Copper Import.” MBio. American Society
for Microbiology, 2021. https://doi.org/10.1128/mbio.01567-21.
ieee: B. Khalfaoui-Hassani, P. I. Trasnea, S. Steimle, H.-G. Koch, and F. Daldal,
“Cysteine mutants of the major facilitator superfamily-type transporter CcoA provide
insight into copper import,” mBio, vol. 12, no. 4. American Society for
Microbiology, 2021.
ista: Khalfaoui-Hassani B, Trasnea PI, Steimle S, Koch H-G, Daldal F. 2021. Cysteine
mutants of the major facilitator superfamily-type transporter CcoA provide insight
into copper import. mBio. 12(4), e01567.
mla: Khalfaoui-Hassani, Bahia, et al. “Cysteine Mutants of the Major Facilitator
Superfamily-Type Transporter CcoA Provide Insight into Copper Import.” MBio,
vol. 12, no. 4, e01567, American Society for Microbiology, 2021, doi:10.1128/mbio.01567-21.
short: B. Khalfaoui-Hassani, P.I. Trasnea, S. Steimle, H.-G. Koch, F. Daldal, MBio
12 (2021).
date_created: 2024-04-03T07:59:04Z
date_published: 2021-08-31T00:00:00Z
date_updated: 2024-04-09T10:47:16Z
day: '31'
ddc:
- '570'
department:
- _id: LeSa
doi: 10.1128/mbio.01567-21
external_id:
pmid:
- '34281385'
file:
- access_level: open_access
checksum: 2f6a57637cb3162eaeeb155a5b031e76
content_type: application/pdf
creator: dernst
date_created: 2024-04-09T10:45:11Z
date_updated: 2024-04-09T10:45:11Z
file_id: '15306'
file_name: 2021_mBio_KhalfaouiHassani.pdf
file_size: 3383398
relation: main_file
success: 1
file_date_updated: 2024-04-09T10:45:11Z
has_accepted_license: '1'
intvolume: ' 12'
issue: '4'
keyword:
- Virology
- Microbiology
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
pmid: 1
publication: mBio
publication_identifier:
issn:
- 2150-7511
publication_status: published
publisher: American Society for Microbiology
quality_controlled: '1'
status: public
title: Cysteine mutants of the major facilitator superfamily-type transporter CcoA
provide insight into copper import
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 12
year: '2021'
...
---
_id: '15275'
abstract:
- lang: eng
text: In 1916, Schur introduced the Ramsey number r(3; m), which is the minimum
integer n > 1 such that for any m-coloring of the edges of the complete graph
Kn, there is a monochromatic copy of K3. He showed that r(3; m) ≤ O(m!), and a
simple construction demonstrates that r(3; m) ≥ 2Ω(m). An old conjecture of Erdős
states that r(3; m) = 2Θ(m). In this note, we prove the conjecture for m-colorings
with bounded VC-dimension, that is, for m-colorings with the property that the
set system induced by the neighborhoods of the vertices with respect to each color
class has bounded VC-dimension.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Jacob
full_name: Fox, Jacob
last_name: Fox
- first_name: János
full_name: Pach, János
id: E62E3130-B088-11EA-B919-BF823C25FEA4
last_name: Pach
- first_name: Andrew
full_name: Suk, Andrew
last_name: Suk
citation:
ama: Fox J, Pach J, Suk A. Bounded VC-dimension implies the Schur-Erdős conjecture.
Combinatorica. 2021;41(6):803-813. doi:10.1007/s00493-021-4530-9
apa: Fox, J., Pach, J., & Suk, A. (2021). Bounded VC-dimension implies the Schur-Erdős
conjecture. Combinatorica. Springer Nature. https://doi.org/10.1007/s00493-021-4530-9
chicago: Fox, Jacob, János Pach, and Andrew Suk. “Bounded VC-Dimension Implies the
Schur-Erdős Conjecture.” Combinatorica. Springer Nature, 2021. https://doi.org/10.1007/s00493-021-4530-9.
ieee: J. Fox, J. Pach, and A. Suk, “Bounded VC-dimension implies the Schur-Erdős
conjecture,” Combinatorica, vol. 41, no. 6. Springer Nature, pp. 803–813,
2021.
ista: Fox J, Pach J, Suk A. 2021. Bounded VC-dimension implies the Schur-Erdős conjecture.
Combinatorica. 41(6), 803–813.
mla: Fox, Jacob, et al. “Bounded VC-Dimension Implies the Schur-Erdős Conjecture.”
Combinatorica, vol. 41, no. 6, Springer Nature, 2021, pp. 803–13, doi:10.1007/s00493-021-4530-9.
short: J. Fox, J. Pach, A. Suk, Combinatorica 41 (2021) 803–813.
date_created: 2024-04-03T07:59:57Z
date_published: 2021-11-20T00:00:00Z
date_updated: 2024-04-09T10:40:08Z
day: '20'
department:
- _id: HeEd
doi: 10.1007/s00493-021-4530-9
external_id:
arxiv:
- '1912.02342'
intvolume: ' 41'
issue: '6'
keyword:
- Computational Mathematics
- Discrete Mathematics and Combinatorics
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.48550/arXiv.1912.02342
month: '11'
oa: 1
oa_version: Preprint
page: 803-813
publication: Combinatorica
publication_identifier:
eissn:
- 1439-6912
issn:
- 0209-9683
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
status: public
title: Bounded VC-dimension implies the Schur-Erdős conjecture
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 41
year: '2021'
...
---
_id: '15276'
abstract:
- lang: eng
text: Biotrophic plant pathogens secrete effector proteins to manipulate the host
physiology. Effectors suppress defenses and induce an environment favorable to
disease development. Sequence-based prediction of effector function is impeded
by their rapid evolution rate. In the maize pathogen Ustilago maydis,
effector-coding genes frequently organize in clusters. Here we describe the functional
characterization of the pleiades, a cluster of ten
effector genes, by analyzing the micro- and macroscopic phenotype of the cluster
deletion and expressing these proteins in planta. Deletion
of the pleiades leads to strongly impaired virulence
and accumulation of reactive oxygen species (ROS) in infected tissue. Eight of
the Pleiades suppress the production of ROS upon perception of pathogen associated
molecular patterns (PAMPs). Although functionally redundant, the Pleiades target
different host components. The paralogs Taygeta1 and Merope1 suppress ROS production
in either the cytoplasm or nucleus, respectively. Merope1 targets and promotes
the auto-ubiquitination activity of RFI2, a conserved family of E3 ligases that
regulates the production of PAMP-triggered ROS burst in plants.
article_number: e1009641
article_processing_charge: Yes
article_type: original
author:
- first_name: Fernando
full_name: Navarrete, Fernando
last_name: Navarrete
- first_name: Nenad
full_name: Grujic, Nenad
last_name: Grujic
- first_name: Alexandra
full_name: Stirnberg, Alexandra
last_name: Stirnberg
- first_name: Indira
full_name: Saado, Indira
last_name: Saado
- first_name: David
full_name: Aleksza, David
last_name: Aleksza
- first_name: Michelle C
full_name: Gallei, Michelle C
id: 35A03822-F248-11E8-B48F-1D18A9856A87
last_name: Gallei
orcid: 0000-0003-1286-7368
- first_name: Hazem
full_name: Adi, Hazem
last_name: Adi
- first_name: André
full_name: Alcântara, André
last_name: Alcântara
- first_name: Mamoona
full_name: Khan, Mamoona
last_name: Khan
- first_name: Janos
full_name: Bindics, Janos
last_name: Bindics
- first_name: Marco
full_name: Trujillo, Marco
last_name: Trujillo
- first_name: Armin
full_name: Djamei, Armin
last_name: Djamei
citation:
ama: Navarrete F, Grujic N, Stirnberg A, et al. The Pleiades are a cluster of fungal
effectors that inhibit host defenses. PLOS Pathogens. 2021;17(6). doi:10.1371/journal.ppat.1009641
apa: Navarrete, F., Grujic, N., Stirnberg, A., Saado, I., Aleksza, D., Gallei, M.
C., … Djamei, A. (2021). The Pleiades are a cluster of fungal effectors that inhibit
host defenses. PLOS Pathogens. Public Library of Science. https://doi.org/10.1371/journal.ppat.1009641
chicago: Navarrete, Fernando, Nenad Grujic, Alexandra Stirnberg, Indira Saado, David
Aleksza, Michelle C Gallei, Hazem Adi, et al. “The Pleiades Are a Cluster of Fungal
Effectors That Inhibit Host Defenses.” PLOS Pathogens. Public Library of
Science, 2021. https://doi.org/10.1371/journal.ppat.1009641.
ieee: F. Navarrete et al., “The Pleiades are a cluster of fungal effectors
that inhibit host defenses,” PLOS Pathogens, vol. 17, no. 6. Public Library
of Science, 2021.
ista: Navarrete F, Grujic N, Stirnberg A, Saado I, Aleksza D, Gallei MC, Adi H,
Alcântara A, Khan M, Bindics J, Trujillo M, Djamei A. 2021. The Pleiades are a
cluster of fungal effectors that inhibit host defenses. PLOS Pathogens. 17(6),
e1009641.
mla: Navarrete, Fernando, et al. “The Pleiades Are a Cluster of Fungal Effectors
That Inhibit Host Defenses.” PLOS Pathogens, vol. 17, no. 6, e1009641,
Public Library of Science, 2021, doi:10.1371/journal.ppat.1009641.
short: F. Navarrete, N. Grujic, A. Stirnberg, I. Saado, D. Aleksza, M.C. Gallei,
H. Adi, A. Alcântara, M. Khan, J. Bindics, M. Trujillo, A. Djamei, PLOS Pathogens
17 (2021).
date_created: 2024-04-03T08:00:34Z
date_published: 2021-06-24T00:00:00Z
date_updated: 2024-04-09T10:26:12Z
day: '24'
ddc:
- '580'
department:
- _id: JiFr
doi: 10.1371/journal.ppat.1009641
external_id:
pmid:
- '34166468'
file:
- access_level: open_access
checksum: ab8428291a0c14607c4ea5656c029cff
content_type: application/pdf
creator: dernst
date_created: 2024-04-09T10:24:43Z
date_updated: 2024-04-09T10:24:43Z
file_id: '15305'
file_name: 2021_PlosPathogens_Navarrete.pdf
file_size: 2616563
relation: main_file
success: 1
file_date_updated: 2024-04-09T10:24:43Z
has_accepted_license: '1'
intvolume: ' 17'
issue: '6'
keyword:
- Virology
- Genetics
- Molecular Biology
- Immunology
- Microbiology
- Parasitology
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
pmid: 1
publication: PLOS Pathogens
publication_identifier:
issn:
- 1553-7374
publication_status: published
publisher: Public Library of Science
quality_controlled: '1'
status: public
title: The Pleiades are a cluster of fungal effectors that inhibit host defenses
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 17
year: '2021'
...
---
_id: '15277'
abstract:
- lang: eng
text: Alternative splicing generates multiple transcript and protein isoforms from
a single gene and controls transcript intracellular localization and stability
by coupling to mRNA export and nonsense-mediated mRNA decay (NMD). RNA interference
(RNAi) is a potent mechanism to modulate gene expression. However, its interactions
with alternative splicing are poorly understood. We used artificial microRNAs
(amiRNAs, also termed shRNAmiR) to knockdown all splice variants of selected target
genes in Arabidopsis thaliana. We found that splice variants, which vary by their
protein-coding capacity, subcellular localization and sensitivity to NMD, are
affected differentially by an amiRNA, although all of them contain the target
site. Particular transcript isoforms escape amiRNA-mediated degradation due to
their nuclear localization. The nuclear and NMD-sensitive isoforms mask RNAi action
in alternatively spliced genes. Interestingly, Arabidopsis SPL genes, which undergo
alternative splicing and are targets of miR156, are regulated in the same manner.
Moreover, similar results were obtained in mammalian cells using siRNAs, indicating
cross-kingdom conservation of these interactions among RNAi and splicing isoforms.
Furthermore, we report that amiRNA can trigger artificial alternative splicing,
thus expanding the RNAi functional repertoire. Our findings unveil novel interactions
between different post-transcriptional processes in defining transcript fates
and regulating gene expression.
article_processing_charge: No
article_type: original
author:
- first_name: Armin
full_name: Fuchs, Armin
last_name: Fuchs
- first_name: Stefan
full_name: Riegler, Stefan
last_name: Riegler
- first_name: Zahra
full_name: Ayatollahi, Zahra
last_name: Ayatollahi
- first_name: Nicola
full_name: Cavallari, Nicola
id: 457160E6-F248-11E8-B48F-1D18A9856A87
last_name: Cavallari
- first_name: Luciana E
full_name: Giono, Luciana E
last_name: Giono
- first_name: Barbara A
full_name: Nimeth, Barbara A
last_name: Nimeth
- first_name: Krishna V
full_name: Mutanwad, Krishna V
last_name: Mutanwad
- first_name: Alois
full_name: Schweighofer, Alois
last_name: Schweighofer
- first_name: Doris
full_name: Lucyshyn, Doris
last_name: Lucyshyn
- first_name: Andrea
full_name: Barta, Andrea
last_name: Barta
- first_name: Ezequiel
full_name: Petrillo, Ezequiel
last_name: Petrillo
- first_name: Maria
full_name: Kalyna, Maria
last_name: Kalyna
citation:
ama: 'Fuchs A, Riegler S, Ayatollahi Z, et al. Targeting alternative splicing by
RNAi: From the differential impact on splice variants to triggering artificial
pre-mRNA splicing. Nucleic Acids Research. 2021;49(2):1133-1151. doi:10.1093/nar/gkaa1260'
apa: 'Fuchs, A., Riegler, S., Ayatollahi, Z., Cavallari, N., Giono, L. E., Nimeth,
B. A., … Kalyna, M. (2021). Targeting alternative splicing by RNAi: From the differential
impact on splice variants to triggering artificial pre-mRNA splicing. Nucleic
Acids Research. Oxford University Press. https://doi.org/10.1093/nar/gkaa1260'
chicago: 'Fuchs, Armin, Stefan Riegler, Zahra Ayatollahi, Nicola Cavallari, Luciana
E Giono, Barbara A Nimeth, Krishna V Mutanwad, et al. “Targeting Alternative Splicing
by RNAi: From the Differential Impact on Splice Variants to Triggering Artificial
Pre-MRNA Splicing.” Nucleic Acids Research. Oxford University Press, 2021.
https://doi.org/10.1093/nar/gkaa1260.'
ieee: 'A. Fuchs et al., “Targeting alternative splicing by RNAi: From the
differential impact on splice variants to triggering artificial pre-mRNA splicing,”
Nucleic Acids Research, vol. 49, no. 2. Oxford University Press, pp. 1133–1151,
2021.'
ista: 'Fuchs A, Riegler S, Ayatollahi Z, Cavallari N, Giono LE, Nimeth BA, Mutanwad
KV, Schweighofer A, Lucyshyn D, Barta A, Petrillo E, Kalyna M. 2021. Targeting
alternative splicing by RNAi: From the differential impact on splice variants
to triggering artificial pre-mRNA splicing. Nucleic Acids Research. 49(2), 1133–1151.'
mla: 'Fuchs, Armin, et al. “Targeting Alternative Splicing by RNAi: From the Differential
Impact on Splice Variants to Triggering Artificial Pre-MRNA Splicing.” Nucleic
Acids Research, vol. 49, no. 2, Oxford University Press, 2021, pp. 1133–51,
doi:10.1093/nar/gkaa1260.'
short: A. Fuchs, S. Riegler, Z. Ayatollahi, N. Cavallari, L.E. Giono, B.A. Nimeth,
K.V. Mutanwad, A. Schweighofer, D. Lucyshyn, A. Barta, E. Petrillo, M. Kalyna,
Nucleic Acids Research 49 (2021) 1133–1151.
date_created: 2024-04-03T08:02:09Z
date_published: 2021-01-25T00:00:00Z
date_updated: 2024-04-09T10:16:40Z
day: '25'
ddc:
- '570'
department:
- _id: EvBe
doi: 10.1093/nar/gkaa1260
external_id:
pmid:
- '33406240'
file:
- access_level: open_access
checksum: d3c90660759a5d34ad43ba1def130462
content_type: application/pdf
creator: dernst
date_created: 2024-04-09T10:14:39Z
date_updated: 2024-04-09T10:14:39Z
file_id: '15304'
file_name: 2021_NucleicAcidsRes_Fuchs.pdf
file_size: 6539791
relation: main_file
success: 1
file_date_updated: 2024-04-09T10:14:39Z
has_accepted_license: '1'
intvolume: ' 49'
issue: '2'
keyword:
- Genetics
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
page: 1133-1151
pmid: 1
publication: Nucleic Acids Research
publication_identifier:
eissn:
- 1362-4962
issn:
- 0305-1048
publication_status: published
publisher: Oxford University Press
quality_controlled: '1'
status: public
title: 'Targeting alternative splicing by RNAi: From the differential impact on splice
variants to triggering artificial pre-mRNA splicing'
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 49
year: '2021'
...
---
_id: '15278'
abstract:
- lang: eng
text: ‘Dysbiosis’ of the adult gut microbiota, in response to challenges such as
infection, altered diet, stress, and antibiotics treatment has been recently linked
to pathological alteration of brain function and behavior. Moreover, gut microbiota
composition constantly controls microglia maturation, as revealed by morphological
observations and gene expression analysis. However, it is unclear whether microglia
functional properties and crosstalk with neurons, known to shape and modulate
synaptic development and function, are influenced by the gut microbiota. Here,
we investigated how antibiotic-mediated alteration of the gut microbiota influences
microglial and neuronal functions in adult mice hippocampus. Hippocampal microglia
from adult mice treated with oral antibiotics exhibited increased microglia density,
altered basal patrolling activity, and impaired process rearrangement in response
to damage. Patch clamp recordings at CA3-CA1 synapses revealed that antibiotics
treatment alters neuronal functions, reducing spontaneous postsynaptic glutamatergic
currents and decreasing synaptic connectivity, without reducing dendritic spines
density. Antibiotics treatment was unable to modulate synaptic function in CX3CR1-deficient
mice, pointing to an involvement of microglia–neuron crosstalk through the CX3CL1/CX3CR1
axis in the effect of dysbiosis on neuronal functions. Together, our findings
show that antibiotic alteration of gut microbiota impairs synaptic efficacy, suggesting
that CX3CL1/CX3CR1 signaling supporting microglia is a major player in in the
gut–brain axis, and in particular in the gut microbiota-to-neuron communication
pathway.
article_number: '2648'
article_processing_charge: Yes
article_type: original
author:
- first_name: Federica
full_name: Cordella, Federica
last_name: Cordella
- first_name: Caterina
full_name: Sanchini, Caterina
last_name: Sanchini
- first_name: Maria
full_name: Rosito, Maria
last_name: Rosito
- first_name: Laura
full_name: Ferrucci, Laura
last_name: Ferrucci
- first_name: Natalia
full_name: Pediconi, Natalia
last_name: Pediconi
- first_name: Barbara
full_name: Cortese, Barbara
last_name: Cortese
- first_name: Francesca
full_name: Guerrieri, Francesca
last_name: Guerrieri
- first_name: Giuseppe Rubens
full_name: Pascucci, Giuseppe Rubens
last_name: Pascucci
- first_name: Fabrizio
full_name: Antonangeli, Fabrizio
last_name: Antonangeli
- first_name: Giovanna
full_name: Peruzzi, Giovanna
last_name: Peruzzi
- first_name: Maria
full_name: Giubettini, Maria
last_name: Giubettini
- first_name: Bernadette
full_name: Basilico, Bernadette
id: 36035796-5ACA-11E9-A75E-7AF2E5697425
last_name: Basilico
orcid: 0000-0003-1843-3173
- first_name: Francesca
full_name: Pagani, Francesca
last_name: Pagani
- first_name: Alfonso
full_name: Grimaldi, Alfonso
last_name: Grimaldi
- first_name: Giuseppina
full_name: D’Alessandro, Giuseppina
last_name: D’Alessandro
- first_name: Cristina
full_name: Limatola, Cristina
last_name: Limatola
- first_name: Davide
full_name: Ragozzino, Davide
last_name: Ragozzino
- first_name: Silvia
full_name: Di Angelantonio, Silvia
last_name: Di Angelantonio
citation:
ama: Cordella F, Sanchini C, Rosito M, et al. Antibiotics treatment modulates microglia–synapses
interaction. Cells. 2021;10(10). doi:10.3390/cells10102648
apa: Cordella, F., Sanchini, C., Rosito, M., Ferrucci, L., Pediconi, N., Cortese,
B., … Di Angelantonio, S. (2021). Antibiotics treatment modulates microglia–synapses
interaction. Cells. MDPI. https://doi.org/10.3390/cells10102648
chicago: Cordella, Federica, Caterina Sanchini, Maria Rosito, Laura Ferrucci, Natalia
Pediconi, Barbara Cortese, Francesca Guerrieri, et al. “Antibiotics Treatment
Modulates Microglia–Synapses Interaction.” Cells. MDPI, 2021. https://doi.org/10.3390/cells10102648.
ieee: F. Cordella et al., “Antibiotics treatment modulates microglia–synapses
interaction,” Cells, vol. 10, no. 10. MDPI, 2021.
ista: Cordella F, Sanchini C, Rosito M, Ferrucci L, Pediconi N, Cortese B, Guerrieri
F, Pascucci GR, Antonangeli F, Peruzzi G, Giubettini M, Basilico B, Pagani F,
Grimaldi A, D’Alessandro G, Limatola C, Ragozzino D, Di Angelantonio S. 2021.
Antibiotics treatment modulates microglia–synapses interaction. Cells. 10(10),
2648.
mla: Cordella, Federica, et al. “Antibiotics Treatment Modulates Microglia–Synapses
Interaction.” Cells, vol. 10, no. 10, 2648, MDPI, 2021, doi:10.3390/cells10102648.
short: F. Cordella, C. Sanchini, M. Rosito, L. Ferrucci, N. Pediconi, B. Cortese,
F. Guerrieri, G.R. Pascucci, F. Antonangeli, G. Peruzzi, M. Giubettini, B. Basilico,
F. Pagani, A. Grimaldi, G. D’Alessandro, C. Limatola, D. Ragozzino, S. Di Angelantonio,
Cells 10 (2021).
date_created: 2024-04-03T08:02:52Z
date_published: 2021-10-04T00:00:00Z
date_updated: 2024-04-09T08:53:23Z
day: '04'
ddc:
- '610'
department:
- _id: GaNo
doi: 10.3390/cells10102648
external_id:
pmid:
- '34685628'
file:
- access_level: open_access
checksum: 1a3b251ce82e2b9474b852d2abe5bb03
content_type: application/pdf
creator: dernst
date_created: 2024-04-09T08:51:22Z
date_updated: 2024-04-09T08:51:22Z
file_id: '15303'
file_name: 2021_Cells_Cordella.pdf
file_size: 2196672
relation: main_file
success: 1
file_date_updated: 2024-04-09T08:51:22Z
has_accepted_license: '1'
intvolume: ' 10'
issue: '10'
keyword:
- General Medicine
language:
- iso: eng
month: '10'
oa: 1
oa_version: Published Version
pmid: 1
publication: Cells
publication_identifier:
issn:
- 2073-4409
publication_status: published
publisher: MDPI
quality_controlled: '1'
status: public
title: Antibiotics treatment modulates microglia–synapses interaction
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 10
year: '2021'
...
---
_id: '15279'
abstract:
- lang: eng
text: We formulate and prove an analog of Poonen’s finite-field Bertini theorem
with Taylor conditions that holds in the Grothendieck ring of varieties. This
gives a broad generalization of the work of Vakil and Wood, who treated the case
of smooth hypersurface sections, and is made possible by the use of motivic Euler
products to write down candidate motivic probabilities. As applications, we give
motivic analogs of many results in arithmetic statistics that have been proven
using Poonen’s sieve, including work of Bucur and Kedlaya on complete intersections
and Erman and Wood on semiample Bertini theorems.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Margaret
full_name: Bilu, Margaret
id: 98C47862-10D5-11EA-BEDD-0F6F3DDC885E
last_name: Bilu
- first_name: Sean
full_name: Howe, Sean
last_name: Howe
citation:
ama: Bilu M, Howe S. Motivic Euler products in motivic statistics. Algebra &
Number Theory. 2021;15(9):2195-2259. doi:10.2140/ant.2021.15.2195
apa: Bilu, M., & Howe, S. (2021). Motivic Euler products in motivic statistics.
Algebra & Number Theory. Mathematical Sciences Publishers. https://doi.org/10.2140/ant.2021.15.2195
chicago: Bilu, Margaret, and Sean Howe. “Motivic Euler Products in Motivic Statistics.”
Algebra & Number Theory. Mathematical Sciences Publishers, 2021. https://doi.org/10.2140/ant.2021.15.2195.
ieee: M. Bilu and S. Howe, “Motivic Euler products in motivic statistics,” Algebra
& Number Theory, vol. 15, no. 9. Mathematical Sciences Publishers, pp.
2195–2259, 2021.
ista: Bilu M, Howe S. 2021. Motivic Euler products in motivic statistics. Algebra
& Number Theory. 15(9), 2195–2259.
mla: Bilu, Margaret, and Sean Howe. “Motivic Euler Products in Motivic Statistics.”
Algebra & Number Theory, vol. 15, no. 9, Mathematical Sciences Publishers,
2021, pp. 2195–259, doi:10.2140/ant.2021.15.2195.
short: M. Bilu, S. Howe, Algebra & Number Theory 15 (2021) 2195–2259.
corr_author: '1'
date_created: 2024-04-03T08:12:59Z
date_published: 2021-12-23T00:00:00Z
date_updated: 2024-10-21T06:02:15Z
day: '23'
department:
- _id: TiBr
doi: 10.2140/ant.2021.15.2195
external_id:
arxiv:
- '1910.05207'
intvolume: ' 15'
issue: '9'
keyword:
- Algebra and Number Theory
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.48550/arXiv.1910.05207
month: '12'
oa: 1
oa_version: Preprint
page: 2195-2259
publication: Algebra & Number Theory
publication_identifier:
eissn:
- 1944-7833
issn:
- 1937-0652
publication_status: published
publisher: Mathematical Sciences Publishers
quality_controlled: '1'
scopus_import: '1'
status: public
title: Motivic Euler products in motivic statistics
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 15
year: '2021'
...
---
_id: '15280'
article_number: '050'
article_processing_charge: No
author:
- first_name: Daniel
full_name: Balazs, Daniel
id: 302BADF6-85FC-11EA-9E3B-B9493DDC885E
last_name: Balazs
orcid: 0000-0001-7597-043X
- first_name: Jessica
full_name: Cimada da Silva, Jessica
last_name: Cimada da Silva
- first_name: Tyler
full_name: Dunbar, Tyler
last_name: Dunbar
- first_name: Maria
full_name: Ibáñez, Maria
id: 43C61214-F248-11E8-B48F-1D18A9856A87
last_name: Ibáñez
orcid: 0000-0001-5013-2843
- first_name: Tobias
full_name: Hanrath, Tobias
last_name: Hanrath
citation:
ama: 'Balazs D, Cimada da Silva J, Dunbar T, Ibáñez M, Hanrath T. Controlled reactive
assembly of colloidal nanocrystal superlattices: Mechanism and kinetics. In: Proceedings
of the Internet NanoGe Conference on Nanocrystals. Fundació Scito; 2021. doi:10.29363/nanoge.incnc.2021.050'
apa: 'Balazs, D., Cimada da Silva, J., Dunbar, T., Ibáñez, M., & Hanrath, T.
(2021). Controlled reactive assembly of colloidal nanocrystal superlattices: Mechanism
and kinetics. In Proceedings of the Internet NanoGe Conference on Nanocrystals.
Virtual: Fundació Scito. https://doi.org/10.29363/nanoge.incnc.2021.050'
chicago: 'Balazs, Daniel, Jessica Cimada da Silva, Tyler Dunbar, Maria Ibáñez, and
Tobias Hanrath. “Controlled Reactive Assembly of Colloidal Nanocrystal Superlattices:
Mechanism and Kinetics.” In Proceedings of the Internet NanoGe Conference on
Nanocrystals. Fundació Scito, 2021. https://doi.org/10.29363/nanoge.incnc.2021.050.'
ieee: 'D. Balazs, J. Cimada da Silva, T. Dunbar, M. Ibáñez, and T. Hanrath, “Controlled
reactive assembly of colloidal nanocrystal superlattices: Mechanism and kinetics,”
in Proceedings of the Internet NanoGe Conference on Nanocrystals, Virtual,
2021.'
ista: 'Balazs D, Cimada da Silva J, Dunbar T, Ibáñez M, Hanrath T. 2021. Controlled
reactive assembly of colloidal nanocrystal superlattices: Mechanism and kinetics.
Proceedings of the Internet NanoGe Conference on Nanocrystals. iNCNC: Internet
nanoGe Conference on Nanocrystals, 050.'
mla: 'Balazs, Daniel, et al. “Controlled Reactive Assembly of Colloidal Nanocrystal
Superlattices: Mechanism and Kinetics.” Proceedings of the Internet NanoGe
Conference on Nanocrystals, 050, Fundació Scito, 2021, doi:10.29363/nanoge.incnc.2021.050.'
short: D. Balazs, J. Cimada da Silva, T. Dunbar, M. Ibáñez, T. Hanrath, in:, Proceedings
of the Internet NanoGe Conference on Nanocrystals, Fundació Scito, 2021.
conference:
end_date: 2021-07-02
location: Virtual
name: 'iNCNC: Internet nanoGe Conference on Nanocrystals'
start_date: 2021-06-28
corr_author: '1'
date_created: 2024-04-03T08:28:26Z
date_published: 2021-06-08T00:00:00Z
date_updated: 2024-10-09T21:08:49Z
day: '08'
department:
- _id: MaIb
- _id: LifeSc
doi: 10.29363/nanoge.incnc.2021.050
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.29363/nanoge.incnc.2021.050
month: '06'
oa: 1
oa_version: Published Version
publication: Proceedings of the Internet NanoGe Conference on Nanocrystals
publication_status: published
publisher: Fundació Scito
quality_controlled: '1'
status: public
title: 'Controlled reactive assembly of colloidal nanocrystal superlattices: Mechanism
and kinetics'
type: conference_abstract
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2021'
...
---
_id: '15283'
article_processing_charge: No
article_type: original
author:
- first_name: William
full_name: Nicolas, William
last_name: Nicolas
- first_name: Florian
full_name: Fäßler, Florian
id: 404F5528-F248-11E8-B48F-1D18A9856A87
last_name: Fäßler
orcid: 0000-0001-7149-769X
- first_name: Elliot
full_name: Meyerowitz, Elliot
last_name: Meyerowitz
- first_name: Grant
full_name: Jensen, Grant
last_name: Jensen
citation:
ama: Nicolas W, Fäßler F, Meyerowitz E, Jensen G. Peaking into the plant cell wall
using cryo-FIB milling and electron cryo-tomography. Microscopy and Microanalysis.
2021;27(S1):3024-3026. doi:10.1017/s1431927621010503
apa: Nicolas, W., Fäßler, F., Meyerowitz, E., & Jensen, G. (2021). Peaking into
the plant cell wall using cryo-FIB milling and electron cryo-tomography. Microscopy
and Microanalysis. Oxford University Press. https://doi.org/10.1017/s1431927621010503
chicago: Nicolas, William, Florian Fäßler, Elliot Meyerowitz, and Grant Jensen.
“Peaking into the Plant Cell Wall Using Cryo-FIB Milling and Electron Cryo-Tomography.”
Microscopy and Microanalysis. Oxford University Press, 2021. https://doi.org/10.1017/s1431927621010503.
ieee: W. Nicolas, F. Fäßler, E. Meyerowitz, and G. Jensen, “Peaking into the plant
cell wall using cryo-FIB milling and electron cryo-tomography,” Microscopy
and Microanalysis, vol. 27, no. S1. Oxford University Press, pp. 3024–3026,
2021.
ista: Nicolas W, Fäßler F, Meyerowitz E, Jensen G. 2021. Peaking into the plant
cell wall using cryo-FIB milling and electron cryo-tomography. Microscopy and
Microanalysis. 27(S1), 3024–3026.
mla: Nicolas, William, et al. “Peaking into the Plant Cell Wall Using Cryo-FIB Milling
and Electron Cryo-Tomography.” Microscopy and Microanalysis, vol. 27, no.
S1, Oxford University Press, 2021, pp. 3024–26, doi:10.1017/s1431927621010503.
short: W. Nicolas, F. Fäßler, E. Meyerowitz, G. Jensen, Microscopy and Microanalysis
27 (2021) 3024–3026.
date_created: 2024-04-03T08:57:23Z
date_published: 2021-08-01T00:00:00Z
date_updated: 2024-04-09T07:55:56Z
day: '01'
department:
- _id: FlSc
doi: 10.1017/s1431927621010503
intvolume: ' 27'
issue: S1
keyword:
- Instrumentation
language:
- iso: eng
month: '08'
oa_version: None
page: 3024-3026
publication: Microscopy and Microanalysis
publication_identifier:
eissn:
- 1435-8115
issn:
- 1431-9276
publication_status: published
publisher: Oxford University Press
quality_controlled: '1'
status: public
title: Peaking into the plant cell wall using cryo-FIB milling and electron cryo-tomography
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 27
year: '2021'
...
---
_id: '15284'
abstract:
- lang: eng
text: "RevTerm is a static analysis tool for proving non-termination of integer
C programs (possibly with non-determinism). RevTerm is an implementation of our
method for non-termination proving presented in the paper “Proving Non-termination
by Program Reversal”.\r\n\r\n"
article_processing_charge: No
author:
- first_name: Krishnendu
full_name: Chatterjee, Krishnendu
id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
last_name: Chatterjee
orcid: 0000-0002-4561-241X
- first_name: Ehsan Kafshdar
full_name: Goharshady, Ehsan Kafshdar
last_name: Goharshady
- first_name: Petr
full_name: Novotný, Petr
id: 3CC3B868-F248-11E8-B48F-1D18A9856A87
last_name: Novotný
- first_name: Dorde
full_name: Zikelic, Dorde
id: 294AA7A6-F248-11E8-B48F-1D18A9856A87
last_name: Zikelic
orcid: 0000-0002-4681-1699
citation:
ama: Chatterjee K, Goharshady EK, Novotný P, Zikelic D. RevTerm. 2021. doi:10.1145/3410304
apa: Chatterjee, K., Goharshady, E. K., Novotný, P., & Zikelic, D. (2021). RevTerm.
Association for Computing Machinery. https://doi.org/10.1145/3410304
chicago: Chatterjee, Krishnendu, Ehsan Kafshdar Goharshady, Petr Novotný, and Dorde
Zikelic. “RevTerm.” Association for Computing Machinery, 2021. https://doi.org/10.1145/3410304.
ieee: K. Chatterjee, E. K. Goharshady, P. Novotný, and D. Zikelic, “RevTerm.” Association
for Computing Machinery, 2021.
ista: Chatterjee K, Goharshady EK, Novotný P, Zikelic D. 2021. RevTerm, Association
for Computing Machinery, 10.1145/3410304.
mla: Chatterjee, Krishnendu, et al. RevTerm. Association for Computing Machinery,
2021, doi:10.1145/3410304.
short: K. Chatterjee, E.K. Goharshady, P. Novotný, D. Zikelic, (2021).
corr_author: '1'
date_created: 2024-04-03T09:00:42Z
date_published: 2021-06-01T00:00:00Z
date_updated: 2025-04-15T06:25:30Z
day: '01'
ddc:
- '000'
department:
- _id: KrCh
doi: 10.1145/3410304
has_accepted_license: '1'
main_file_link:
- open_access: '1'
url: https://doi.org/10.1145/3410304
month: '06'
oa: 1
oa_version: Published Version
publisher: Association for Computing Machinery
related_material:
record:
- id: '9644'
relation: used_in_publication
status: public
status: public
title: RevTerm
type: research_data_reference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2021'
...
---
_id: '15285'
abstract:
- lang: eng
text: Ever since the first publication of the standard communication protocol for
computer-assisted electrocardiography (SCP-ECG), prENV 1064, in 1993, by the European
Committee for Standardization (CEN), SCP-ECG has become a leading example in health
informatics, enabling open, secure, and well-documented digital data exchange
at a low cost, for quick and efficient cardiovascular disease detection and management.
Based on the experiences gained, since the 1970s, in computerized electrocardiology,
and on the results achieved by the pioneering, international cooperative research
on common standards for quantitative electrocardiography (CSE), SCP-ECG was designed,
from the beginning, to empower personalized medicine, thanks to serial ECG analysis.
The fundamental concept behind SCP-ECG is to convey the necessary information
for ECG re-analysis, serial comparison, and interpretation, and to structure the
ECG data and metadata in sections that are mostly optional in order to fit all
use cases. SCP-ECG is open to the storage of the ECG signal and ECG measurement
data, whatever the ECG recording modality or computation method, and can store
the over-reading trails and ECG annotations, as well as any computerized or medical
interpretation reports. Only the encoding syntax and the semantics of the ECG
descriptors and of the diagnosis codes are standardized. We present all of the
landmarks in the development and publication of SCP-ECG, from the early 1990s
to the 2009 International Organization for Standardization (ISO) SCP-ECG standards,
including the latest version published by CEN in 2020, which now encompasses rest
and stress ECGs, Holter recordings, and protocol-based trials.
acknowledgement: This research received no external funding. The authors thank the
large number of researchers, engineers, cardiologists, and clinicians from academia,
industry, and normalization organizations who contributed to the development and
testing of the SCP-ECG standards.
article_processing_charge: Yes
article_type: review
author:
- first_name: Paul
full_name: Rubel, Paul
last_name: Rubel
- first_name: Jocelyne
full_name: Fayn, Jocelyne
last_name: Fayn
- first_name: Peter W.
full_name: Macfarlane, Peter W.
last_name: Macfarlane
- first_name: Danilo
full_name: Pani, Danilo
last_name: Pani
- first_name: Alois
full_name: Schlögl, Alois
id: 45BF87EE-F248-11E8-B48F-1D18A9856A87
last_name: Schlögl
orcid: 0000-0002-5621-8100
- first_name: Alpo
full_name: Värri, Alpo
last_name: Värri
citation:
ama: 'Rubel P, Fayn J, Macfarlane PW, Pani D, Schlögl A, Värri A. The history and
challenges of SCP-ECG: The standard communication protocol for computer-assisted
electrocardiography. Hearts. 2021;2(3):384-409. doi:10.3390/hearts2030031'
apa: 'Rubel, P., Fayn, J., Macfarlane, P. W., Pani, D., Schlögl, A., & Värri,
A. (2021). The history and challenges of SCP-ECG: The standard communication protocol
for computer-assisted electrocardiography. Hearts. MDPI. https://doi.org/10.3390/hearts2030031'
chicago: 'Rubel, Paul, Jocelyne Fayn, Peter W. Macfarlane, Danilo Pani, Alois Schlögl,
and Alpo Värri. “The History and Challenges of SCP-ECG: The Standard Communication
Protocol for Computer-Assisted Electrocardiography.” Hearts. MDPI, 2021.
https://doi.org/10.3390/hearts2030031.'
ieee: 'P. Rubel, J. Fayn, P. W. Macfarlane, D. Pani, A. Schlögl, and A. Värri, “The
history and challenges of SCP-ECG: The standard communication protocol for computer-assisted
electrocardiography,” Hearts, vol. 2, no. 3. MDPI, pp. 384–409, 2021.'
ista: 'Rubel P, Fayn J, Macfarlane PW, Pani D, Schlögl A, Värri A. 2021. The history
and challenges of SCP-ECG: The standard communication protocol for computer-assisted
electrocardiography. Hearts. 2(3), 384–409.'
mla: 'Rubel, Paul, et al. “The History and Challenges of SCP-ECG: The Standard Communication
Protocol for Computer-Assisted Electrocardiography.” Hearts, vol. 2, no.
3, MDPI, 2021, pp. 384–409, doi:10.3390/hearts2030031.'
short: P. Rubel, J. Fayn, P.W. Macfarlane, D. Pani, A. Schlögl, A. Värri, Hearts
2 (2021) 384–409.
date_created: 2024-04-03T09:03:31Z
date_published: 2021-08-24T00:00:00Z
date_updated: 2024-04-09T06:51:50Z
day: '24'
ddc:
- '610'
department:
- _id: ScienComp
doi: 10.3390/hearts2030031
file:
- access_level: open_access
checksum: f67142b1e1e8ca5cd7a6a6798f46375e
content_type: application/pdf
creator: dernst
date_created: 2024-04-09T06:49:47Z
date_updated: 2024-04-09T06:49:47Z
file_id: '15302'
file_name: 2021_Hearts_Rubel.pdf
file_size: 3539897
relation: main_file
success: 1
file_date_updated: 2024-04-09T06:49:47Z
has_accepted_license: '1'
intvolume: ' 2'
issue: '3'
keyword:
- General Medicine
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
page: 384-409
publication: Hearts
publication_identifier:
issn:
- 2673-3846
publication_status: published
publisher: MDPI
quality_controlled: '1'
status: public
title: 'The history and challenges of SCP-ECG: The standard communication protocol
for computer-assisted electrocardiography'
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 2
year: '2021'
...
---
_id: '10552'
abstract:
- lang: eng
text: We study a class of convex-concave saddle-point problems of the form minxmaxy⟨Kx,y⟩+fP(x)−h∗(y)
where K is a linear operator, fP is the sum of a convex function f with a Lipschitz-continuous
gradient and the indicator function of a bounded convex polytope P, and h∗ is
a convex (possibly nonsmooth) function. Such problem arises, for example, as a
Lagrangian relaxation of various discrete optimization problems. Our main assumptions
are the existence of an efficient linear minimization oracle (lmo) for fP and
an efficient proximal map for h∗ which motivate the solution via a blend of proximal
primal-dual algorithms and Frank-Wolfe algorithms. In case h∗ is the indicator
function of a linear constraint and function f is quadratic, we show a O(1/n2)
convergence rate on the dual objective, requiring O(nlogn) calls of lmo. If the
problem comes from the constrained optimization problem minx∈Rd{fP(x)|Ax−b=0}
then we additionally get bound O(1/n2) both on the primal gap and on the infeasibility
gap. In the most general case, we show a O(1/n) convergence rate of the primal-dual
gap again requiring O(nlogn) calls of lmo. To the best of our knowledge, this
improves on the known convergence rates for the considered class of saddle-point
problems. We show applications to labeling problems frequently appearing in machine
learning and computer vision.
acknowledgement: Vladimir Kolmogorov was supported by the European Research Council
under the European Unions Seventh Framework Programme (FP7/2007-2013)/ERC grant
agreement no 616160. Thomas Pock acknowledges support by an ERC grant HOMOVIS, no
640156.
article_processing_charge: No
arxiv: 1
author:
- first_name: Vladimir
full_name: Kolmogorov, Vladimir
id: 3D50B0BA-F248-11E8-B48F-1D18A9856A87
last_name: Kolmogorov
- first_name: Thomas
full_name: Pock, Thomas
last_name: Pock
citation:
ama: 'Kolmogorov V, Pock T. One-sided Frank-Wolfe algorithms for saddle problems.
In: 38th International Conference on Machine Learning. ; 2021.'
apa: Kolmogorov, V., & Pock, T. (2021). One-sided Frank-Wolfe algorithms for
saddle problems. In 38th International Conference on Machine Learning.
Virtual.
chicago: Kolmogorov, Vladimir, and Thomas Pock. “One-Sided Frank-Wolfe Algorithms
for Saddle Problems.” In 38th International Conference on Machine Learning,
2021.
ieee: V. Kolmogorov and T. Pock, “One-sided Frank-Wolfe algorithms for saddle problems,”
in 38th International Conference on Machine Learning, Virtual, 2021.
ista: 'Kolmogorov V, Pock T. 2021. One-sided Frank-Wolfe algorithms for saddle problems.
38th International Conference on Machine Learning. ICML: International Conference
on Machine Learning.'
mla: Kolmogorov, Vladimir, and Thomas Pock. “One-Sided Frank-Wolfe Algorithms for
Saddle Problems.” 38th International Conference on Machine Learning, 2021.
short: V. Kolmogorov, T. Pock, in:, 38th International Conference on Machine Learning,
2021.
conference:
end_date: 2021-07-24
location: Virtual
name: 'ICML: International Conference on Machine Learning'
start_date: 2021-07-18
corr_author: '1'
date_created: 2021-12-16T12:41:20Z
date_published: 2021-07-01T00:00:00Z
date_updated: 2025-07-16T08:04:23Z
day: '01'
department:
- _id: VlKo
ec_funded: 1
external_id:
arxiv:
- '2101.12617'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/2101.12617
month: '07'
oa: 1
oa_version: Preprint
project:
- _id: 25FBA906-B435-11E9-9278-68D0E5697425
call_identifier: FP7
grant_number: '616160'
name: 'Discrete Optimization in Computer Vision: Theory and Practice'
publication: 38th International Conference on Machine Learning
publication_status: published
quality_controlled: '1'
scopus_import: '1'
status: public
title: One-sided Frank-Wolfe algorithms for saddle problems
type: conference
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
year: '2021'
...
---
_id: '10553'
abstract:
- lang: eng
text: The popularity of permissioned blockchain systems demands BFT SMR protocols
that are efficient under good network conditions (synchrony) and robust under
bad network conditions (asynchrony). The state-of-the-art partially synchronous
BFT SMR protocols provide optimal linear communication cost per decision under
synchrony and good leaders, but lose liveness under asynchrony. On the other hand,
the state-of-the-art asynchronous BFT SMR protocols are live even under asynchrony,
but always pay quadratic cost even under synchrony. In this paper, we propose
a BFT SMR protocol that achieves the best of both worlds -- optimal linear cost
per decision under good networks and leaders, optimal quadratic cost per decision
under bad networks, and remains always live.
article_processing_charge: No
arxiv: 1
author:
- first_name: Rati
full_name: Gelashvili, Rati
last_name: Gelashvili
- first_name: Eleftherios
full_name: Kokoris Kogias, Eleftherios
id: f5983044-d7ef-11ea-ac6d-fd1430a26d30
last_name: Kokoris Kogias
- first_name: Alexander
full_name: Spiegelman, Alexander
last_name: Spiegelman
- first_name: Zhuolun
full_name: Xiang, Zhuolun
last_name: Xiang
citation:
ama: 'Gelashvili R, Kokoris Kogias E, Spiegelman A, Xiang Z. Brief announcement:
Be prepared when network goes bad: An asynchronous view-change protocol. In: Proceedings
of the 2021 ACM Symposium on Principles of Distributed Computing. Association
for Computing Machinery; 2021:187-190. doi:10.1145/3465084.3467941'
apa: 'Gelashvili, R., Kokoris Kogias, E., Spiegelman, A., & Xiang, Z. (2021).
Brief announcement: Be prepared when network goes bad: An asynchronous view-change
protocol. In Proceedings of the 2021 ACM Symposium on Principles of Distributed
Computing (pp. 187–190). Virtual, Italy: Association for Computing Machinery.
https://doi.org/10.1145/3465084.3467941'
chicago: 'Gelashvili, Rati, Eleftherios Kokoris Kogias, Alexander Spiegelman, and
Zhuolun Xiang. “Brief Announcement: Be Prepared When Network Goes Bad: An Asynchronous
View-Change Protocol.” In Proceedings of the 2021 ACM Symposium on Principles
of Distributed Computing, 187–90. Association for Computing Machinery, 2021.
https://doi.org/10.1145/3465084.3467941.'
ieee: 'R. Gelashvili, E. Kokoris Kogias, A. Spiegelman, and Z. Xiang, “Brief announcement:
Be prepared when network goes bad: An asynchronous view-change protocol,” in Proceedings
of the 2021 ACM Symposium on Principles of Distributed Computing, Virtual,
Italy, 2021, pp. 187–190.'
ista: 'Gelashvili R, Kokoris Kogias E, Spiegelman A, Xiang Z. 2021. Brief announcement:
Be prepared when network goes bad: An asynchronous view-change protocol. Proceedings
of the 2021 ACM Symposium on Principles of Distributed Computing. PODC: Principles
of Distributed Computing, 187–190.'
mla: 'Gelashvili, Rati, et al. “Brief Announcement: Be Prepared When Network Goes
Bad: An Asynchronous View-Change Protocol.” Proceedings of the 2021 ACM Symposium
on Principles of Distributed Computing, Association for Computing Machinery,
2021, pp. 187–90, doi:10.1145/3465084.3467941.'
short: R. Gelashvili, E. Kokoris Kogias, A. Spiegelman, Z. Xiang, in:, Proceedings
of the 2021 ACM Symposium on Principles of Distributed Computing, Association
for Computing Machinery, 2021, pp. 187–190.
conference:
end_date: 2021-07-30
location: Virtual, Italy
name: 'PODC: Principles of Distributed Computing'
start_date: 2021-07-26
date_created: 2021-12-16T13:20:19Z
date_published: 2021-07-21T00:00:00Z
date_updated: 2023-09-04T11:42:10Z
day: '21'
department:
- _id: ElKo
doi: 10.1145/3465084.3467941
external_id:
arxiv:
- '2103.03181'
isi:
- '000744439800018'
isi: 1
keyword:
- optimal
- state machine replication
- fallback
- asynchrony
- byzantine faults
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/2103.03181
month: '07'
oa: 1
oa_version: Preprint
page: 187-190
publication: Proceedings of the 2021 ACM Symposium on Principles of Distributed Computing
publication_identifier:
isbn:
- 9-781-4503-8548-0
publication_status: published
publisher: Association for Computing Machinery
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Brief announcement: Be prepared when network goes bad: An asynchronous view-change
protocol'
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2021'
...
---
_id: '10554'
abstract:
- lang: eng
text: 'We present DAG-Rider, the first asynchronous Byzantine Atomic Broadcast protocol
that achieves optimal resilience, optimal amortized communication complexity,
and optimal time complexity. DAG-Rider is post-quantum safe and ensures that all
values proposed by correct processes eventually get delivered. We construct DAG-Rider
in two layers: In the first layer, processes reliably broadcast their proposals
and build a structured Directed Acyclic Graph (DAG) of the communication among
them. In the second layer, processes locally observe their DAGs and totally order
all proposals with no extra communication.'
acknowledgement: "Oded Naor is grateful to the Technion Hiroshi Fujiwara Cyber-Security
Research Center for providing a research grant. Part of Oded’s work was done while
at Novi Research. This work was funded by the Novi team at Facebook. We also wish
to thank the Novi Research team for valuable feedback, and in particular George
Danezis, Alberto Sonnino, and Dahlia Malkhi.\r\n"
article_processing_charge: No
arxiv: 1
author:
- first_name: Idit
full_name: Keidar, Idit
last_name: Keidar
- first_name: Eleftherios
full_name: Kokoris Kogias, Eleftherios
id: f5983044-d7ef-11ea-ac6d-fd1430a26d30
last_name: Kokoris Kogias
- first_name: Oded
full_name: Naor, Oded
last_name: Naor
- first_name: Alexander
full_name: Spiegelman, Alexander
last_name: Spiegelman
citation:
ama: 'Keidar I, Kokoris Kogias E, Naor O, Spiegelman A. All You Need is DAG. In:
Proceedings of the 2021 ACM Symposium on Principles of Distributed Computing.
Association for Computing Machinery; 2021:165-175. doi:10.1145/3465084.3467905'
apa: 'Keidar, I., Kokoris Kogias, E., Naor, O., & Spiegelman, A. (2021). All
You Need is DAG. In Proceedings of the 2021 ACM Symposium on Principles of
Distributed Computing (pp. 165–175). Virtual, Italy: Association for Computing
Machinery. https://doi.org/10.1145/3465084.3467905'
chicago: Keidar, Idit, Eleftherios Kokoris Kogias, Oded Naor, and Alexander Spiegelman.
“All You Need Is DAG.” In Proceedings of the 2021 ACM Symposium on Principles
of Distributed Computing, 165–75. Association for Computing Machinery, 2021.
https://doi.org/10.1145/3465084.3467905.
ieee: I. Keidar, E. Kokoris Kogias, O. Naor, and A. Spiegelman, “All You Need is
DAG,” in Proceedings of the 2021 ACM Symposium on Principles of Distributed
Computing, Virtual, Italy, 2021, pp. 165–175.
ista: 'Keidar I, Kokoris Kogias E, Naor O, Spiegelman A. 2021. All You Need is DAG.
Proceedings of the 2021 ACM Symposium on Principles of Distributed Computing.
PODC: Principles of Distributed Computing, 165–175.'
mla: Keidar, Idit, et al. “All You Need Is DAG.” Proceedings of the 2021 ACM
Symposium on Principles of Distributed Computing, Association for Computing
Machinery, 2021, pp. 165–75, doi:10.1145/3465084.3467905.
short: I. Keidar, E. Kokoris Kogias, O. Naor, A. Spiegelman, in:, Proceedings of
the 2021 ACM Symposium on Principles of Distributed Computing, Association for
Computing Machinery, 2021, pp. 165–175.
conference:
end_date: 2021-07-30
location: Virtual, Italy
name: 'PODC: Principles of Distributed Computing'
start_date: 2021-07-26
date_created: 2021-12-16T13:21:13Z
date_published: 2021-07-21T00:00:00Z
date_updated: 2023-08-17T06:24:44Z
day: '21'
department:
- _id: ElKo
doi: 10.1145/3465084.3467905
external_id:
arxiv:
- '2102.08325'
isi:
- '000744439800016'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/2102.08325
month: '07'
oa: 1
oa_version: Preprint
page: 165-175
publication: Proceedings of the 2021 ACM Symposium on Principles of Distributed Computing
publication_identifier:
isbn:
- 978-1-4503-8548-0
publication_status: published
publisher: Association for Computing Machinery
quality_controlled: '1'
scopus_import: '1'
status: public
title: All You Need is DAG
type: conference
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
year: '2021'
...
---
_id: '10559'
abstract:
- lang: eng
text: Hole gases in planar germanium can have high mobilities in combination with
strong spin-orbit interaction and electrically tunable g factors, and are therefore
emerging as a promising platform for creating hybrid superconductor-semiconductor
devices. A key challenge towards hybrid Ge-based quantum technologies is the design
of high-quality interfaces and superconducting contacts that are robust against
magnetic fields. In this work, by combining the assets of aluminum, which provides
good contact to the Ge, and niobium, which has a significant superconducting gap,
we demonstrate highly transparent low-disordered JoFETs with relatively large
ICRN products that are capable of withstanding high magnetic fields. We furthermore
demonstrate the ability of phase-biasing individual JoFETs, opening up an avenue
to explore topological superconductivity in planar Ge. The persistence of superconductivity
in the reported hybrid devices beyond 1.8 T paves the way towards integrating
spin qubits and proximity-induced superconductivity on the same chip.
acknowledged_ssus:
- _id: NanoFab
- _id: M-Shop
acknowledgement: This research and related results were made possible with the support
of the NOMIS Foundation. This research was supported by the Scientific Service Units
of IST Austria through resources provided by the MIBA Machine Shop and the nanofabrication
facility, the European Union's Horizon 2020 research and innovation program under
the Marie Sklodowska-Curie Grant agreement No. 844511 Grant Agreement No. 862046.
ICN2 acknowledge funding from Generalitat de Catalunya 2017 SGR 327. ICN2 is supported
by the Severo Ochoa program from Spanish MINECO (Grant No. SEV-2017-0706) and is
funded by the CERCA Programme/Generalitat de Catalunya. Part of the present work
has been performed in the framework of Universitat Autnoma de Barcelona Materials
Science PhD program. The HAADF-STEM microscopy was conducted in the Laboratorio
de Microscopias Avanzadas at Instituto de Nanociencia de Aragon-Universidad de Zaragoza.
Authors acknowledge the LMA-INA for offering access to their instruments and expertise.
We acknowledge support from CSIC Research Platform on Quantum Technologies PTI-001.
This project has received funding from the European Union's Horizon 2020 research
and innovation programme under Grant Agreement No. 823717 ESTEEM3. M.B. acknowledges
support from SUR Generalitat de Catalunya and the EU Social Fund; project ref. 2020
FI 00103. G.S. and M.V. acknowledge support through a projectruimte grant associated
with the Netherlands Organization of Scientific Research (NWO). J.D. acknowledges
support through FRIPRO-project 274853, which is funded by the Research Council of
Norway.
article_number: L022005
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Kushagra
full_name: Aggarwal, Kushagra
id: b22ab905-3539-11eb-84c3-fc159dcd79cb
last_name: Aggarwal
orcid: 0000-0001-9985-9293
- first_name: Andrea C
full_name: Hofmann, Andrea C
id: 340F461A-F248-11E8-B48F-1D18A9856A87
last_name: Hofmann
- first_name: Daniel
full_name: Jirovec, Daniel
id: 4C473F58-F248-11E8-B48F-1D18A9856A87
last_name: Jirovec
orcid: 0000-0002-7197-4801
- first_name: Ivan
full_name: Prieto Gonzalez, Ivan
id: 2A307FE2-F248-11E8-B48F-1D18A9856A87
last_name: Prieto Gonzalez
orcid: 0000-0002-7370-5357
- first_name: Amir
full_name: Sammak, Amir
last_name: Sammak
- first_name: Marc
full_name: Botifoll, Marc
last_name: Botifoll
- first_name: Sara
full_name: Martí-Sánchez, Sara
last_name: Martí-Sánchez
- first_name: Menno
full_name: Veldhorst, Menno
last_name: Veldhorst
- first_name: Jordi
full_name: Arbiol, Jordi
last_name: Arbiol
- first_name: Giordano
full_name: Scappucci, Giordano
last_name: Scappucci
- first_name: Jeroen
full_name: Danon, Jeroen
last_name: Danon
- first_name: Georgios
full_name: Katsaros, Georgios
id: 38DB5788-F248-11E8-B48F-1D18A9856A87
last_name: Katsaros
orcid: 0000-0001-8342-202X
citation:
ama: Aggarwal K, Hofmann AC, Jirovec D, et al. Enhancement of proximity-induced
superconductivity in a planar Ge hole gas. Physical Review Research. 2021;3(2).
doi:10.1103/physrevresearch.3.l022005
apa: Aggarwal, K., Hofmann, A. C., Jirovec, D., Prieto Gonzalez, I., Sammak, A.,
Botifoll, M., … Katsaros, G. (2021). Enhancement of proximity-induced superconductivity
in a planar Ge hole gas. Physical Review Research. American Physical Society.
https://doi.org/10.1103/physrevresearch.3.l022005
chicago: Aggarwal, Kushagra, Andrea C Hofmann, Daniel Jirovec, Ivan Prieto Gonzalez,
Amir Sammak, Marc Botifoll, Sara Martí-Sánchez, et al. “Enhancement of Proximity-Induced
Superconductivity in a Planar Ge Hole Gas.” Physical Review Research. American
Physical Society, 2021. https://doi.org/10.1103/physrevresearch.3.l022005.
ieee: K. Aggarwal et al., “Enhancement of proximity-induced superconductivity
in a planar Ge hole gas,” Physical Review Research, vol. 3, no. 2. American
Physical Society, 2021.
ista: Aggarwal K, Hofmann AC, Jirovec D, Prieto Gonzalez I, Sammak A, Botifoll M,
Martí-Sánchez S, Veldhorst M, Arbiol J, Scappucci G, Danon J, Katsaros G. 2021.
Enhancement of proximity-induced superconductivity in a planar Ge hole gas. Physical
Review Research. 3(2), L022005.
mla: Aggarwal, Kushagra, et al. “Enhancement of Proximity-Induced Superconductivity
in a Planar Ge Hole Gas.” Physical Review Research, vol. 3, no. 2, L022005,
American Physical Society, 2021, doi:10.1103/physrevresearch.3.l022005.
short: K. Aggarwal, A.C. Hofmann, D. Jirovec, I. Prieto Gonzalez, A. Sammak, M.
Botifoll, S. Martí-Sánchez, M. Veldhorst, J. Arbiol, G. Scappucci, J. Danon, G.
Katsaros, Physical Review Research 3 (2021).
corr_author: '1'
date_created: 2021-12-16T18:50:57Z
date_published: 2021-04-15T00:00:00Z
date_updated: 2025-04-15T08:38:16Z
day: '15'
ddc:
- '620'
department:
- _id: GeKa
doi: 10.1103/physrevresearch.3.l022005
ec_funded: 1
external_id:
arxiv:
- '2012.00322'
file:
- access_level: open_access
checksum: 60a1bc9c9b616b1b155044bb8cfc6484
content_type: application/pdf
creator: cchlebak
date_created: 2021-12-17T08:12:37Z
date_updated: 2021-12-17T08:12:37Z
file_id: '10561'
file_name: 2021_PhysRevResearch_Aggarwal.pdf
file_size: 1917512
relation: main_file
success: 1
file_date_updated: 2021-12-17T08:12:37Z
has_accepted_license: '1'
intvolume: ' 3'
issue: '2'
keyword:
- general engineering
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
project:
- _id: 26A151DA-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '844511'
name: Majorana bound states in Ge/SiGe heterostructures
- _id: 237E5020-32DE-11EA-91FC-C7463DDC885E
call_identifier: H2020
grant_number: '862046'
name: TOPOLOGICALLY PROTECTED AND SCALABLE QUANTUM BITS
publication: Physical Review Research
publication_identifier:
issn:
- 2643-1564
publication_status: published
publisher: American Physical Society
quality_controlled: '1'
related_material:
record:
- id: '8834'
relation: research_data
status: public
- id: '8831'
relation: earlier_version
status: public
scopus_import: '1'
status: public
title: Enhancement of proximity-induced superconductivity in a planar Ge hole gas
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
volume: 3
year: '2021'
...
---
_id: '10565'
abstract:
- lang: eng
text: 'Enzymatic digestion of the extracellular matrix with chondroitinase-ABC reinstates
juvenile-like plasticity in the adult cortex as it also disassembles the perineuronal
nets (PNNs). The disadvantage of the enzyme is that it must be applied intracerebrally
and it degrades the ECM for several weeks. Here, we provide two minimally invasive
and transient protocols for microglia-enabled PNN disassembly in mouse cortex:
repeated treatment with ketamine-xylazine-acepromazine (KXA) anesthesia and 60-Hz
light entrainment. We also discuss how to analyze PNNs within microglial endosomes-lysosomes.
For complete details on the use and execution of this protocol, please refer to
Venturino et al. (2021).'
acknowledged_ssus:
- _id: Bio
acknowledgement: This research was supported by the European Research Council (grant
715571 to S.S.). We thank Rouven Schulz, Michael Schunn, Claudia Gold, Gabriel Krens,
Sarah Gorkiewicz, Margaret Maes, Jürgen Siegert, Marco Benevento, and Sara Oakeley
for comments on the manuscript and the IST Austria Bioimaging Facility for the technical
support.
article_number: '101012'
article_processing_charge: Yes
article_type: original
author:
- first_name: Alessandro
full_name: Venturino, Alessandro
id: 41CB84B2-F248-11E8-B48F-1D18A9856A87
last_name: Venturino
orcid: 0000-0003-2356-9403
- first_name: Sandra
full_name: Siegert, Sandra
id: 36ACD32E-F248-11E8-B48F-1D18A9856A87
last_name: Siegert
orcid: 0000-0001-8635-0877
citation:
ama: Venturino A, Siegert S. Minimally invasive protocols and quantification for
microglia-mediated perineuronal net disassembly in mouse brain. STAR Protocols.
2021;2(4). doi:10.1016/j.xpro.2021.101012
apa: Venturino, A., & Siegert, S. (2021). Minimally invasive protocols and quantification
for microglia-mediated perineuronal net disassembly in mouse brain. STAR Protocols.
Elsevier. https://doi.org/10.1016/j.xpro.2021.101012
chicago: Venturino, Alessandro, and Sandra Siegert. “Minimally Invasive Protocols
and Quantification for Microglia-Mediated Perineuronal Net Disassembly in Mouse
Brain.” STAR Protocols. Elsevier, 2021. https://doi.org/10.1016/j.xpro.2021.101012.
ieee: A. Venturino and S. Siegert, “Minimally invasive protocols and quantification
for microglia-mediated perineuronal net disassembly in mouse brain,” STAR Protocols,
vol. 2, no. 4. Elsevier, 2021.
ista: Venturino A, Siegert S. 2021. Minimally invasive protocols and quantification
for microglia-mediated perineuronal net disassembly in mouse brain. STAR Protocols.
2(4), 101012.
mla: Venturino, Alessandro, and Sandra Siegert. “Minimally Invasive Protocols and
Quantification for Microglia-Mediated Perineuronal Net Disassembly in Mouse Brain.”
STAR Protocols, vol. 2, no. 4, 101012, Elsevier, 2021, doi:10.1016/j.xpro.2021.101012.
short: A. Venturino, S. Siegert, STAR Protocols 2 (2021).
date_created: 2021-12-19T23:01:32Z
date_published: 2021-12-17T00:00:00Z
date_updated: 2025-05-14T11:26:30Z
day: '17'
ddc:
- '573'
department:
- _id: SaSi
doi: 10.1016/j.xpro.2021.101012
ec_funded: 1
file:
- access_level: open_access
checksum: 9ea2501056c5df99e84726b845e9b976
content_type: application/pdf
creator: cchlebak
date_created: 2021-12-20T08:58:40Z
date_updated: 2021-12-20T08:58:40Z
file_id: '10570'
file_name: 2021_STARProt_Venturino.pdf
file_size: 6207060
relation: main_file
success: 1
file_date_updated: 2021-12-20T08:58:40Z
has_accepted_license: '1'
intvolume: ' 2'
issue: '4'
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
project:
- _id: 25D4A630-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '715571'
name: Microglia action towards neuronal circuit formation and function in health
and disease
publication: STAR Protocols
publication_identifier:
eissn:
- 2666-1667
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Minimally invasive protocols and quantification for microglia-mediated perineuronal
net disassembly in mouse brain
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 2
year: '2021'
...
---
_id: '10568'
abstract:
- lang: eng
text: Genetic adaptation and phenotypic plasticity facilitate the migration into
new habitats and enable organisms to cope with a rapidly changing environment.
In contrast to genetic adaptation that spans multiple generations as an evolutionary
process, phenotypic plasticity allows acclimation within the life-time of an organism.
Genetic adaptation and phenotypic plasticity are usually studied in isolation,
however, only by including their interactive impact, we can understand acclimation
and adaptation in nature. We aimed to explore the contribution of adaptation and
plasticity in coping with an abiotic (salinity) and a biotic (Vibrio bacteria)
stressor using six different populations of the broad-nosed pipefish Syngnathus
typhle that originated from either high [14–17 Practical Salinity Unit (PSU)]
or low (7–11 PSU) saline environments along the German coastline of the Baltic
Sea. We exposed wild caught animals, to either high (15 PSU) or low (7 PSU) salinity,
representing native and novel salinity conditions and allowed animals to mate.
After male pregnancy, offspring was split and each half was exposed to one of
the two salinities and infected with Vibrio alginolyticus bacteria that were evolved
at either of the two salinities in a fully reciprocal design. We investigated
life-history traits of fathers and expression of 47 target genes in mothers and
offspring. Pregnant males originating from high salinity exposed to low salinity
were highly susceptible to opportunistic fungi infections resulting in decreased
offspring size and number. In contrast, no signs of fungal infection were identified
in fathers originating from low saline conditions suggesting that genetic adaptation
has the potential to overcome the challenges encountered at low salinity. Offspring
from parents with low saline origin survived better at low salinity suggesting
genetic adaptation to low salinity. In addition, gene expression analyses of juveniles
indicated patterns of local adaptation, trans-generational plasticity and developmental
plasticity. In conclusion, our study suggests that pipefish are locally adapted
to the low salinity in their environment, however, they are retaining phenotypic
plasticity, which allows them to also cope with ancestral salinity levels and
prevailing pathogens.
acknowledgement: We are grateful for the help of Kristina Dauven, Andreas Ebner, Janina
Röckner, and Paulina Urban for fish collection in the field and fish maintenance.
Furthermore, we thank Fabian Wendt for setting up the aquaria system and Tatjana
Liese, Paulina Urban, Jakob Gismann, and Thorsten Reusch for support with DNA extraction
and analysis of pipefish population structure. The authors acknowledge support of
Isabel Tanger, Agnes Piecyk, Jonas Müller, Grace Walls, Sebastian Albrecht, Julia
Böge, and Julia Stefanschitz for their support in preparing cDNA and running of
Fluidigm chips. A special thank goes to Diana Gill for general lab support, ordering
materials and just being the good spirit of our molecular lab, to Till Bayer for
bioinformatics support and to Melanie Heckwolf for fruitful discussion and feedback
on the manuscript. HG is very grateful for inspirational office space with ocean
view provided by Lisa Hentschel and family. This manuscript has been released as
a pre-print at BIORXIV.
article_number: '626442'
article_processing_charge: No
article_type: original
author:
- first_name: Henry
full_name: Goehlich, Henry
last_name: Goehlich
- first_name: Linda
full_name: Sartoris, Linda
id: 2B9284CA-F248-11E8-B48F-1D18A9856A87
last_name: Sartoris
- first_name: Kim-Sara
full_name: Wagner, Kim-Sara
last_name: Wagner
- first_name: Carolin C.
full_name: Wendling, Carolin C.
last_name: Wendling
- first_name: Olivia
full_name: Roth, Olivia
last_name: Roth
citation:
ama: Goehlich H, Sartoris L, Wagner K-S, Wendling CC, Roth O. Pipefish locally adapted
to low salinity in the Baltic Sea retain phenotypic plasticity to cope with ancestral
salinity levels. Frontiers in Ecology and Evolution. 2021;9. doi:10.3389/fevo.2021.626442
apa: Goehlich, H., Sartoris, L., Wagner, K.-S., Wendling, C. C., & Roth, O.
(2021). Pipefish locally adapted to low salinity in the Baltic Sea retain phenotypic
plasticity to cope with ancestral salinity levels. Frontiers in Ecology and
Evolution. Frontiers Media. https://doi.org/10.3389/fevo.2021.626442
chicago: Goehlich, Henry, Linda Sartoris, Kim-Sara Wagner, Carolin C. Wendling,
and Olivia Roth. “Pipefish Locally Adapted to Low Salinity in the Baltic Sea Retain
Phenotypic Plasticity to Cope with Ancestral Salinity Levels.” Frontiers in
Ecology and Evolution. Frontiers Media, 2021. https://doi.org/10.3389/fevo.2021.626442.
ieee: H. Goehlich, L. Sartoris, K.-S. Wagner, C. C. Wendling, and O. Roth, “Pipefish
locally adapted to low salinity in the Baltic Sea retain phenotypic plasticity
to cope with ancestral salinity levels,” Frontiers in Ecology and Evolution,
vol. 9. Frontiers Media, 2021.
ista: Goehlich H, Sartoris L, Wagner K-S, Wendling CC, Roth O. 2021. Pipefish locally
adapted to low salinity in the Baltic Sea retain phenotypic plasticity to cope
with ancestral salinity levels. Frontiers in Ecology and Evolution. 9, 626442.
mla: Goehlich, Henry, et al. “Pipefish Locally Adapted to Low Salinity in the Baltic
Sea Retain Phenotypic Plasticity to Cope with Ancestral Salinity Levels.” Frontiers
in Ecology and Evolution, vol. 9, 626442, Frontiers Media, 2021, doi:10.3389/fevo.2021.626442.
short: H. Goehlich, L. Sartoris, K.-S. Wagner, C.C. Wendling, O. Roth, Frontiers
in Ecology and Evolution 9 (2021).
date_created: 2021-12-20T07:53:19Z
date_published: 2021-03-25T00:00:00Z
date_updated: 2023-08-17T06:27:22Z
day: '25'
ddc:
- '597'
department:
- _id: SyCr
doi: 10.3389/fevo.2021.626442
external_id:
isi:
- '000637736300001'
file:
- access_level: open_access
checksum: 8d6e2b767bb0240a9b5a3a3555be51fd
content_type: application/pdf
creator: alisjak
date_created: 2021-12-20T10:44:20Z
date_updated: 2021-12-20T10:44:20Z
file_id: '10572'
file_name: 2021_Frontiers_Goehlich.pdf
file_size: 3175085
relation: main_file
success: 1
file_date_updated: 2021-12-20T10:44:20Z
has_accepted_license: '1'
intvolume: ' 9'
isi: 1
keyword:
- ecology
- evolution
- behavior and systematics
- trans-generational plasticity
- genetic adaptation
- local adaptation
- phenotypic plasticity
- Baltic Sea
- climate change
- salinity
- syngnathids
language:
- iso: eng
month: '03'
oa: 1
oa_version: Published Version
publication: Frontiers in Ecology and Evolution
publication_identifier:
issn:
- 2296-701X
publication_status: published
publisher: Frontiers Media
quality_controlled: '1'
scopus_import: '1'
status: public
title: Pipefish locally adapted to low salinity in the Baltic Sea retain phenotypic
plasticity to cope with ancestral salinity levels
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 9
year: '2021'
...
---
_id: '10569'
abstract:
- lang: eng
text: 'For animals to survive until reproduction, it is crucial that juveniles successfully
detect potential predators and respond with appropriate behavior. The recognition
of cues originating from predators can be innate or learned. Cues of various modalities
might be used alone or in multi-modal combinations to detect and distinguish predators
but studies investigating multi-modal integration in predator avoidance are scarce.
Here, we used wild, naive tadpoles of the Neotropical poison frog Allobates femoralis
( Boulenger, 1884) to test their reaction to cues with two modalities from two
different sympatrically occurring potential predators: heterospecific predatory
Dendrobates tinctorius tadpoles and dragonfly larvae. We presented A. femoralis
tadpoles with olfactory or visual cues, or a combination of the two, and compared
their reaction to a water control in a between-individual design. In our trials,
A. femoralis tadpoles reacted to multi-modal stimuli (a combination of visual
and chemical information) originating from dragonfly larvae with avoidance but
showed no reaction to uni-modal cues or cues from heterospecific tadpoles. In
addition, visual cues from conspecifics increased swimming activity while cues
from predators had no effect on tadpole activity. Our results show that A. femoralis
tadpoles can innately recognize some predators and probably need both visual and
chemical information to effectively avoid them. This is the first study looking
at anti-predator behavior in poison frog tadpoles. We discuss how parental care
might influence the expression of predator avoidance responses in tadpoles.'
acknowledgement: We are grateful to Véronique Helfer, Walter Hödl, Lisa Schretzmeyer
and Julia Wotke, who assisted with fieldwork in French Guiana. This work was supported
by the Austrian Science Fund (FWF) [P24788, T699 and P31518 to E.R.; P33728 to M.R.;
J3827 to Thomas Bugnyar, Tecumseh Fitch and Ludwig Huber]; and by the Austrian Bundesministerium
für Wissenschaft, Forschung und Wirtschaft [IS761001 to J.O. (Tecumseh Fitch, Thomas
Bugnyar and Ludwig Huber)]. A.P. was supported by the European Union's Horizon 2020
research and innovation programme under the Marie Sklodowska-Curie grant agreement
no. 835530. S.A.R. was supported by the HT faculty, Lund University. We thank the
CNRS Nouragues Ecological Research Station, which benefited from the ‘Investissement
d'Avenir’ grants managed by the Agence Nationale de la Recherche (AnaEE France ANR-11-INBS-0001;
Labex CEBA ANR-10-LABX-25-01). Open access funding provided by University of Vienna.
Deposited in PMC for immediate release.
article_number: jeb243647
article_processing_charge: No
article_type: original
author:
- first_name: B
full_name: Szabo, B
last_name: Szabo
- first_name: R
full_name: Mangione, R
last_name: Mangione
- first_name: M
full_name: Rath, M
last_name: Rath
- first_name: A
full_name: Pašukonis, A
last_name: Pašukonis
- first_name: SA
full_name: Reber, SA
last_name: Reber
- first_name: Jinook
full_name: Oh, Jinook
id: 403169A4-080F-11EA-9993-BF3F3DDC885E
last_name: Oh
orcid: 0000-0001-7425-2372
- first_name: M
full_name: Ringler, M
last_name: Ringler
- first_name: E
full_name: Ringler, E
last_name: Ringler
citation:
ama: Szabo B, Mangione R, Rath M, et al. Naïve poison frog tadpoles use bi-modal
cues to avoid insect predators but not heterospecific predatory tadpoles. Journal
of Experimental Biology. 2021;224(24). doi:10.1242/jeb.243647
apa: Szabo, B., Mangione, R., Rath, M., Pašukonis, A., Reber, S., Oh, J., … Ringler,
E. (2021). Naïve poison frog tadpoles use bi-modal cues to avoid insect predators
but not heterospecific predatory tadpoles. Journal of Experimental Biology.
The Company of Biologists. https://doi.org/10.1242/jeb.243647
chicago: Szabo, B, R Mangione, M Rath, A Pašukonis, SA Reber, Jinook Oh, M Ringler,
and E Ringler. “Naïve Poison Frog Tadpoles Use Bi-Modal Cues to Avoid Insect Predators
but Not Heterospecific Predatory Tadpoles.” Journal of Experimental Biology.
The Company of Biologists, 2021. https://doi.org/10.1242/jeb.243647.
ieee: B. Szabo et al., “Naïve poison frog tadpoles use bi-modal cues to avoid
insect predators but not heterospecific predatory tadpoles,” Journal of Experimental
Biology, vol. 224, no. 24. The Company of Biologists, 2021.
ista: Szabo B, Mangione R, Rath M, Pašukonis A, Reber S, Oh J, Ringler M, Ringler
E. 2021. Naïve poison frog tadpoles use bi-modal cues to avoid insect predators
but not heterospecific predatory tadpoles. Journal of Experimental Biology. 224(24),
jeb243647.
mla: Szabo, B., et al. “Naïve Poison Frog Tadpoles Use Bi-Modal Cues to Avoid Insect
Predators but Not Heterospecific Predatory Tadpoles.” Journal of Experimental
Biology, vol. 224, no. 24, jeb243647, The Company of Biologists, 2021, doi:10.1242/jeb.243647.
short: B. Szabo, R. Mangione, M. Rath, A. Pašukonis, S. Reber, J. Oh, M. Ringler,
E. Ringler, Journal of Experimental Biology 224 (2021).
date_created: 2021-12-20T07:54:22Z
date_published: 2021-12-16T00:00:00Z
date_updated: 2024-10-21T06:02:05Z
day: '16'
ddc:
- '573'
department:
- _id: SyCr
doi: 10.1242/jeb.243647
external_id:
isi:
- '000738259300013'
pmid:
- '34845497'
file:
- access_level: open_access
checksum: 75d13a5ec8e3b90e3bc02bd8a9c17eef
content_type: application/pdf
creator: cchlebak
date_created: 2021-12-20T10:14:14Z
date_updated: 2021-12-20T10:14:14Z
file_id: '10571'
file_name: 2021_JExpBio_Szabo.pdf
file_size: 607096
relation: main_file
success: 1
file_date_updated: 2021-12-20T10:14:14Z
has_accepted_license: '1'
intvolume: ' 224'
isi: 1
issue: '24'
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
pmid: 1
publication: Journal of Experimental Biology
publication_identifier:
eissn:
- 1477-9145
issn:
- 0022-0949
publication_status: published
publisher: The Company of Biologists
quality_controlled: '1'
scopus_import: '1'
status: public
title: Naïve poison frog tadpoles use bi-modal cues to avoid insect predators but
not heterospecific predatory tadpoles
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 224
year: '2021'
...