---
_id: '13239'
abstract:
- lang: eng
  text: Brains are thought to engage in predictive learning - learning to predict
    upcoming stimuli - to construct an internal model of their environment. This is
    especially notable for spatial navigation, as first described by Tolman’s latent
    learning tasks. However, predictive learning has also been observed in sensory
    cortex, in settings unrelated to spatial navigation. Apart from normative frameworks
    such as active inference or efficient coding, what could be the utility of learning
    to predict the patterns of occurrence of correlated stimuli? Here we show that
    prediction, and thereby the construction of an internal model of sequential stimuli,
    can bootstrap the learning process of a working memory task in a recurrent neural
    network. We implemented predictive learning alongside working memory match-tasks,
    and networks emerged to solve the prediction task first by encoding information
    across time to predict upcoming stimuli, and then eavesdropped on this solution
    to solve the matching task. Eavesdropping was most beneficial when neural resources
    were limited. Hence, predictive learning acts as a general neural mechanism to
    learn to store sensory information that can later be essential for working memory
    tasks.
acknowledgement: "The authors would like to thank members of the Vogels lab and Manohar
  lab, as well as Adam Packer, Andrew Saxe, Stefano Sarao Mannelli and Jacob Bakermans
  for fruitful discussions and comments on earlier versions of the manuscript.\r\nTLvdP
  was supported by funding from the Biotechnology and Biological Sciences Research
  Council (BBSRC) [grant number BB/M011224/1]. TPV was supported by an ERC Consolidator
  Grant (SYNAPSEEK). SGM was funded by a MRC Clinician Scientist Fellowship MR/P00878X
  and Leverhulme Grant RPG-2018-310."
article_processing_charge: No
author:
- first_name: Thijs L.
  full_name: Van Der Plas, Thijs L.
  last_name: Van Der Plas
- first_name: Tim P
  full_name: Vogels, Tim P
  id: CB6FF8D2-008F-11EA-8E08-2637E6697425
  last_name: Vogels
  orcid: 0000-0003-3295-6181
- first_name: Sanjay G.
  full_name: Manohar, Sanjay G.
  last_name: Manohar
citation:
  ama: 'Van Der Plas TL, Vogels TP, Manohar SG. Predictive learning enables neural
    networks to learn complex working memory tasks. In: <i>Proceedings of Machine
    Learning Research</i>. Vol 199. ML Research Press; 2022:518-531.'
  apa: Van Der Plas, T. L., Vogels, T. P., &#38; Manohar, S. G. (2022). Predictive
    learning enables neural networks to learn complex working memory tasks. In <i>Proceedings
    of Machine Learning Research</i> (Vol. 199, pp. 518–531). ML Research Press.
  chicago: Van Der Plas, Thijs L., Tim P Vogels, and Sanjay G. Manohar. “Predictive
    Learning Enables Neural Networks to Learn Complex Working Memory Tasks.” In <i>Proceedings
    of Machine Learning Research</i>, 199:518–31. ML Research Press, 2022.
  ieee: T. L. Van Der Plas, T. P. Vogels, and S. G. Manohar, “Predictive learning
    enables neural networks to learn complex working memory tasks,” in <i>Proceedings
    of Machine Learning Research</i>, 2022, vol. 199, pp. 518–531.
  ista: Van Der Plas TL, Vogels TP, Manohar SG. 2022. Predictive learning enables
    neural networks to learn complex working memory tasks. Proceedings of Machine
    Learning Research. vol. 199, 518–531.
  mla: Van Der Plas, Thijs L., et al. “Predictive Learning Enables Neural Networks
    to Learn Complex Working Memory Tasks.” <i>Proceedings of Machine Learning Research</i>,
    vol. 199, ML Research Press, 2022, pp. 518–31.
  short: T.L. Van Der Plas, T.P. Vogels, S.G. Manohar, in:, Proceedings of Machine
    Learning Research, ML Research Press, 2022, pp. 518–531.
date_created: 2023-07-16T22:01:12Z
date_published: 2022-12-01T00:00:00Z
date_updated: 2025-04-14T07:54:31Z
day: '01'
ddc:
- '000'
department:
- _id: TiVo
ec_funded: 1
file:
- access_level: open_access
  checksum: 7530a93ef42e10b4db1e5e4b69796e93
  content_type: application/pdf
  creator: dernst
  date_created: 2023-07-18T06:32:38Z
  date_updated: 2023-07-18T06:32:38Z
  file_id: '13243'
  file_name: 2022_PMLR_vanderPlas.pdf
  file_size: 585135
  relation: main_file
  success: 1
file_date_updated: 2023-07-18T06:32:38Z
has_accepted_license: '1'
intvolume: '       199'
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
page: 518-531
project:
- _id: 0aacfa84-070f-11eb-9043-d7eb2c709234
  call_identifier: H2020
  grant_number: '819603'
  name: Learning the shape of synaptic plasticity rules for neuronal architectures
    and function through machine learning.
publication: Proceedings of Machine Learning Research
publication_identifier:
  eissn:
  - 2640-3498
publication_status: published
publisher: ML Research Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Predictive learning enables neural networks to learn complex working memory
  tasks
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 199
year: '2022'
...
---
_id: '13240'
abstract:
- lang: eng
  text: Ustilago maydis is a biotrophic phytopathogenic fungus that causes corn smut
    disease. As a well-established model system, U. maydis is genetically fully accessible
    with large omics datasets available and subject to various biological questions
    ranging from DNA-repair, RNA-transport, and protein secretion to disease biology.
    For many genetic approaches, tight control of transgene regulation is important.
    Here we established an optimised version of the Tetracycline-ON (TetON) system
    for U. maydis. We demonstrate the Tetracycline concentration-dependent expression
    of fluorescent protein transgenes and the system’s suitability for the induced
    expression of the toxic protein BCL2 Associated X-1 (Bax1). The Golden Gate compatible
    vector system contains a native minimal promoter from the mating factor a-1 encoding
    gene, mfa with ten copies of the tet-regulated operator (tetO) and a codon optimised
    Tet-repressor (tetR*) which is translationally fused to the native transcriptional
    corepressor Mql1 (UMAG_05501). The metabolism-independent transcriptional regulator
    system is functional both, in liquid culture as well as on solid media in the
    presence of the inducer and can become a useful tool for toxin-antitoxin studies,
    identification of antifungal proteins, and to study functions of toxic gene products
    in Ustilago maydis.
acknowledgement: "The research leading to these results received funding from the
  European Research Council under the European Union’s Seventh Framework Programme
  ERC-2013-STG (grant agreement: 335691), the Austrian Science Fund (I 3033-B22),
  the Austrian Academy of Sciences, and the Deutsche Forschungsgemeinschaft (DFG,
  German Research Foundation) under Germany's Excellence Strategy EXC-2070-390732324
  (PhenoRob) and DFG grant (DJ 64/5-1).\r\nWe would like to thank the GMI/IMBA/IMP
  core facilities for their excellent technical support. We would like to acknowledge
  Dr. Sinéad A. O’Sullivan from DZNE, University of Bonn for providing anti-GFP antibodies.
  The authors are thankful to the Excellence University of Bonn for providing infrastructure
  and instrumentation facilities at the INRES-Plant Pathology department."
article_number: '1029114'
article_processing_charge: Yes
article_type: original
author:
- first_name: Kishor D.
  full_name: Ingole, Kishor D.
  last_name: Ingole
- first_name: Nithya
  full_name: Nagarajan, Nithya
  last_name: Nagarajan
- first_name: Simon
  full_name: Uhse, Simon
  last_name: Uhse
- first_name: Caterina
  full_name: Giannini, Caterina
  id: e3fdddd5-f6e0-11ea-865d-ca99ee6367f4
  last_name: Giannini
- first_name: Armin
  full_name: Djamei, Armin
  last_name: Djamei
citation:
  ama: Ingole KD, Nagarajan N, Uhse S, Giannini C, Djamei A. Tetracycline-controlled
    (TetON) gene expression system for the smut fungus Ustilago maydis. <i>Frontiers
    in Fungal Biology</i>. 2022;3. doi:<a href="https://doi.org/10.3389/ffunb.2022.1029114">10.3389/ffunb.2022.1029114</a>
  apa: Ingole, K. D., Nagarajan, N., Uhse, S., Giannini, C., &#38; Djamei, A. (2022).
    Tetracycline-controlled (TetON) gene expression system for the smut fungus Ustilago
    maydis. <i>Frontiers in Fungal Biology</i>. Frontiers Media. <a href="https://doi.org/10.3389/ffunb.2022.1029114">https://doi.org/10.3389/ffunb.2022.1029114</a>
  chicago: Ingole, Kishor D., Nithya Nagarajan, Simon Uhse, Caterina Giannini, and
    Armin Djamei. “Tetracycline-Controlled (TetON) Gene Expression System for the
    Smut Fungus Ustilago Maydis.” <i>Frontiers in Fungal Biology</i>. Frontiers Media,
    2022. <a href="https://doi.org/10.3389/ffunb.2022.1029114">https://doi.org/10.3389/ffunb.2022.1029114</a>.
  ieee: K. D. Ingole, N. Nagarajan, S. Uhse, C. Giannini, and A. Djamei, “Tetracycline-controlled
    (TetON) gene expression system for the smut fungus Ustilago maydis,” <i>Frontiers
    in Fungal Biology</i>, vol. 3. Frontiers Media, 2022.
  ista: Ingole KD, Nagarajan N, Uhse S, Giannini C, Djamei A. 2022. Tetracycline-controlled
    (TetON) gene expression system for the smut fungus Ustilago maydis. Frontiers
    in Fungal Biology. 3, 1029114.
  mla: Ingole, Kishor D., et al. “Tetracycline-Controlled (TetON) Gene Expression
    System for the Smut Fungus Ustilago Maydis.” <i>Frontiers in Fungal Biology</i>,
    vol. 3, 1029114, Frontiers Media, 2022, doi:<a href="https://doi.org/10.3389/ffunb.2022.1029114">10.3389/ffunb.2022.1029114</a>.
  short: K.D. Ingole, N. Nagarajan, S. Uhse, C. Giannini, A. Djamei, Frontiers in
    Fungal Biology 3 (2022).
date_created: 2023-07-16T22:01:12Z
date_published: 2022-10-19T00:00:00Z
date_updated: 2024-03-06T14:01:57Z
day: '19'
ddc:
- '579'
department:
- _id: JiFr
doi: 10.3389/ffunb.2022.1029114
file:
- access_level: open_access
  checksum: 2254e0119c0749d6f7237084fefcece6
  content_type: application/pdf
  creator: dernst
  date_created: 2023-07-17T11:46:34Z
  date_updated: 2023-07-17T11:46:34Z
  file_id: '13242'
  file_name: 2023_FrontiersFungalBio_Ingole.pdf
  file_size: 27966699
  relation: main_file
  success: 1
file_date_updated: 2023-07-17T11:46:34Z
has_accepted_license: '1'
intvolume: '         3'
language:
- iso: eng
month: '10'
oa: 1
oa_version: Published Version
publication: Frontiers in Fungal Biology
publication_identifier:
  eissn:
  - 2673-6128
publication_status: published
publisher: Frontiers Media
quality_controlled: '1'
scopus_import: '1'
status: public
title: Tetracycline-controlled (TetON) gene expression system for the smut fungus
  Ustilago maydis
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 3
year: '2022'
...
---
_id: '13241'
abstract:
- lang: eng
  text: Addressing fairness concerns about machine learning models is a crucial step
    towards their long-term adoption in real-world automated systems. Many approaches
    for training fair models from data have been developed and an implicit assumption
    about such algorithms is that they are able to recover a fair model, despite potential
    historical biases in the data. In this work we show a number of impossibility
    results that indicate that there is no learning algorithm that can recover a fair
    model when a proportion of the dataset is subject to arbitrary manipulations.
    Specifically, we prove that there are situations in which an adversary can force
    any learner to return a biased classifier, with or without degrading accuracy,
    and that the strength of this bias increases for learning problems with underrepresented
    protected groups in the data. Our results emphasize on the importance of studying
    further data corruption models of various strength and of establishing stricter
    data collection practices for fairness-aware learning.
acknowledgement: "This paper is a shortened, workshop version of Konstantinov and
  Lampert (2021),\r\nhttps://arxiv.org/abs/2102.06004. For further results, including
  an analysis of algorithms achieving the lower bounds from this paper, we refer to
  the full version."
article_processing_charge: No
arxiv: 1
author:
- first_name: Nikola H
  full_name: Konstantinov, Nikola H
  id: 4B9D76E4-F248-11E8-B48F-1D18A9856A87
  last_name: Konstantinov
- first_name: Christoph
  full_name: Lampert, Christoph
  id: 40C20FD2-F248-11E8-B48F-1D18A9856A87
  last_name: Lampert
  orcid: 0000-0001-8622-7887
citation:
  ama: 'Konstantinov NH, Lampert C. On the impossibility of fairness-aware learning
    from corrupted data. In: <i>Proceedings of Machine Learning Research</i>. Vol
    171. ML Research Press; 2022:59-83.'
  apa: Konstantinov, N. H., &#38; Lampert, C. (2022). On the impossibility of fairness-aware
    learning from corrupted data. In <i>Proceedings of Machine Learning Research</i>
    (Vol. 171, pp. 59–83). ML Research Press.
  chicago: Konstantinov, Nikola H, and Christoph Lampert. “On the Impossibility of
    Fairness-Aware Learning from Corrupted Data.” In <i>Proceedings of Machine Learning
    Research</i>, 171:59–83. ML Research Press, 2022.
  ieee: N. H. Konstantinov and C. Lampert, “On the impossibility of fairness-aware
    learning from corrupted data,” in <i>Proceedings of Machine Learning Research</i>,
    2022, vol. 171, pp. 59–83.
  ista: Konstantinov NH, Lampert C. 2022. On the impossibility of fairness-aware learning
    from corrupted data. Proceedings of Machine Learning Research. vol. 171, 59–83.
  mla: Konstantinov, Nikola H., and Christoph Lampert. “On the Impossibility of Fairness-Aware
    Learning from Corrupted Data.” <i>Proceedings of Machine Learning Research</i>,
    vol. 171, ML Research Press, 2022, pp. 59–83.
  short: N.H. Konstantinov, C. Lampert, in:, Proceedings of Machine Learning Research,
    ML Research Press, 2022, pp. 59–83.
corr_author: '1'
date_created: 2023-07-16T22:01:13Z
date_published: 2022-12-01T00:00:00Z
date_updated: 2024-10-09T21:05:54Z
day: '01'
department:
- _id: ChLa
external_id:
  arxiv:
  - '2102.06004'
intvolume: '       171'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2102.06004
month: '12'
oa: 1
oa_version: Preprint
page: 59-83
publication: Proceedings of Machine Learning Research
publication_identifier:
  eissn:
  - 2640-3498
publication_status: published
publisher: ML Research Press
quality_controlled: '1'
related_material:
  record:
  - id: '10802'
    relation: extended_version
    status: public
scopus_import: '1'
status: public
title: On the impossibility of fairness-aware learning from corrupted data
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 171
year: '2022'
...
---
OA_place: publisher
OA_type: gold
_id: '19984'
abstract:
- lang: eng
  text: "The first part of this paper is a survey of mathematical results on mirror
    symmetry phenomena between Hitchin systems for Langlands dual groups. The second
    part introduces\r\nand discusses multiplicity algebras of the Hitchin system on
    Lagrangians, and considers\r\ncorresponding conjectural structures on their mirror."
acknowledgement: "The author thanks Nigel Hitchin for introducing him to Higgs bundles
  during 1995–1998,\r\nsuggesting the SYZ picture for Langlands dual Hitchin systems
  in 1996, and for the\r\nmore recent collaborations [29, 30]. He also thanks David
  Ben-Zvi, Pierre-Henri Chaudouard, Pierre Deligne, Ron Donagi, Sergei Gukov, Jochen
  Heinloth, Vadim Kaloshin,\r\nJoel Kamnitzer, Gérard Laumon, Anton Mellit, David
  Nadler, Andy Neitzke, Ngô Bao\r\nChâu, Michael Thaddeus, Tony Pantev, Du Pei, Richárd
  Rimányi, Leonid Rybnikov, Vivek\r\nShende, Balázs Szendrői, András Szenes, Fernando
  Rodriguez-Villegas, Edward Witten,\r\nand Zhiwei Yun for discussions about the subjects
  in this paper over the years. Thanks are\r\nalso due to Hülya Argüz, Jakub Löwit,
  Balázs Szendrői, and Nigel Hitchin for the careful\r\nreading of the paper."
article_processing_charge: No
arxiv: 1
author:
- first_name: Tamás
  full_name: Hausel, Tamás
  id: 4A0666D8-F248-11E8-B48F-1D18A9856A87
  last_name: Hausel
  orcid: 0000-0002-9582-2634
citation:
  ama: 'Hausel T. Enhanced mirror symmetry for Langlands dual Hitchin systems. In:
    <i>International Congress of Mathematicians</i>. EMS Press; 2022:2228-2249. doi:<a
    href="https://doi.org/10.4171/icm2022/164">10.4171/icm2022/164</a>'
  apa: 'Hausel, T. (2022). Enhanced mirror symmetry for Langlands dual Hitchin systems.
    In <i>International Congress of Mathematicians</i> (pp. 2228–2249). virtuel: EMS
    Press. <a href="https://doi.org/10.4171/icm2022/164">https://doi.org/10.4171/icm2022/164</a>'
  chicago: Hausel, Tamás. “Enhanced Mirror Symmetry for Langlands Dual Hitchin Systems.”
    In <i>International Congress of Mathematicians</i>, 2228–49. EMS Press, 2022.
    <a href="https://doi.org/10.4171/icm2022/164">https://doi.org/10.4171/icm2022/164</a>.
  ieee: T. Hausel, “Enhanced mirror symmetry for Langlands dual Hitchin systems,”
    in <i>International Congress of Mathematicians</i>, EMS Press, 2022, pp. 2228–2249.
  ista: 'Hausel T. 2022.Enhanced mirror symmetry for Langlands dual Hitchin systems.
    In: International Congress of Mathematicians. , 2228–2249.'
  mla: Hausel, Tamás. “Enhanced Mirror Symmetry for Langlands Dual Hitchin Systems.”
    <i>International Congress of Mathematicians</i>, EMS Press, 2022, pp. 2228–49,
    doi:<a href="https://doi.org/10.4171/icm2022/164">10.4171/icm2022/164</a>.
  short: T. Hausel, in:, International Congress of Mathematicians, EMS Press, 2022,
    pp. 2228–2249.
conference:
  end_date: 2022-07-14
  location: virtuel
  name: 'ICM: International Congress of Mathematicians'
  start_date: 2022-07-06
corr_author: '1'
date_created: 2025-07-10T13:13:36Z
date_published: 2022-07-15T00:00:00Z
date_updated: 2025-09-24T09:12:13Z
day: '15'
ddc:
- '510'
department:
- _id: TaHa
doi: 10.4171/icm2022/164
external_id:
  arxiv:
  - '2112.09455'
file:
- access_level: open_access
  checksum: d2b9d4cf51c854f1082d8dc18c5853b1
  content_type: application/pdf
  creator: dernst
  date_created: 2025-09-24T09:05:05Z
  date_updated: 2025-09-24T09:05:05Z
  file_id: '20387'
  file_name: 2022_ICM_Hausel.pdf
  file_size: 655370
  relation: main_file
  success: 1
file_date_updated: 2025-09-24T09:05:05Z
has_accepted_license: '1'
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
page: 2228-2249
publication: International Congress of Mathematicians
publication_identifier:
  eisbn:
  - '9783985475582'
  isbn:
  - '9783985470587'
publication_status: published
publisher: EMS Press
quality_controlled: '1'
status: public
title: Enhanced mirror symmetry for Langlands dual Hitchin systems
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: book_chapter
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2022'
...
---
_id: '15268'
abstract:
- lang: eng
  text: Apolipoprotein A‐I (apoA‐I) has a key function in the reverse cholesterol
    transport. However, aggregation of apoA‐I single point mutants can lead to hereditary
    amyloid pathology. Although several studies have tackled the biophysical and structural
    consequences introduced by these mutations, there is little information addressing
    the relationship between the evolutionary and structural features that contribute
    to the amyloid behavior of apoA‐I. We combined evolutionary studies, in silico
    mutagenesis and molecular dynamics (MD) simulations to provide a comprehensive
    analysis of the conservation and pathogenic role of the aggregation‐prone regions
    (APRs) present in apoA‐I. Sequence analysis demonstrated that among the four amyloidogenic
    regions described for human apoA‐I, only two (APR1 and APR4) are evolutionary
    conserved across different species of Sarcopterygii. Moreover, stability analysis
    carried out with the FoldX engine showed that APR1 contributes to the marginal
    stability of apoA‐I. Structural properties of full‐length apoA‐I models suggest
    that aggregation is avoided by placing APRs into highly packed and rigid portions
    of its native fold. Compared to silent variants extracted from the gnomAD database,
    the thermodynamic and pathogenic impact of amyloid mutations showed evidence of
    a higher destabilizing effect. MD simulations of the amyloid variant G26R evidenced
    the partial unfolding of the alpha‐helix bundle with the concomitant exposure
    of APR1 to the solvent, suggesting an insight into the early steps involved in
    its aggregation. Our findings highlight APR1 as a relevant component for apoA‐I
    structural integrity and emphasize a destabilizing effect of amyloid variants
    that leads to the exposure of this region.
article_processing_charge: No
article_type: original
author:
- first_name: Romina A.
  full_name: Gisonno, Romina A.
  last_name: Gisonno
- first_name: Tomas
  full_name: Masson, Tomas
  id: 93ac43e8-8599-11eb-9b86-f6efb0a4c207
  last_name: Masson
  orcid: 0000-0002-2634-6283
- first_name: Nahuel A.
  full_name: Ramella, Nahuel A.
  last_name: Ramella
- first_name: Exequiel E.
  full_name: Barrera, Exequiel E.
  last_name: Barrera
- first_name: Víctor
  full_name: Romanowski, Víctor
  last_name: Romanowski
- first_name: M. Alejandra
  full_name: Tricerri, M. Alejandra
  last_name: Tricerri
citation:
  ama: 'Gisonno RA, Masson T, Ramella NA, Barrera EE, Romanowski V, Tricerri MA. Evolutionary
    and structural constraints influencing apolipoprotein A‐I amyloid behavior. <i>Proteins:
    Structure, Function, and Bioinformatics</i>. 2022;90(1):258-269. doi:<a href="https://doi.org/10.1002/prot.26217">10.1002/prot.26217</a>'
  apa: 'Gisonno, R. A., Masson, T., Ramella, N. A., Barrera, E. E., Romanowski, V.,
    &#38; Tricerri, M. A. (2022). Evolutionary and structural constraints influencing
    apolipoprotein A‐I amyloid behavior. <i>Proteins: Structure, Function, and Bioinformatics</i>.
    Wiley. <a href="https://doi.org/10.1002/prot.26217">https://doi.org/10.1002/prot.26217</a>'
  chicago: 'Gisonno, Romina A., Tomas Masson, Nahuel A. Ramella, Exequiel E. Barrera,
    Víctor Romanowski, and M. Alejandra Tricerri. “Evolutionary and Structural Constraints
    Influencing Apolipoprotein A‐I Amyloid Behavior.” <i>Proteins: Structure, Function,
    and Bioinformatics</i>. Wiley, 2022. <a href="https://doi.org/10.1002/prot.26217">https://doi.org/10.1002/prot.26217</a>.'
  ieee: 'R. A. Gisonno, T. Masson, N. A. Ramella, E. E. Barrera, V. Romanowski, and
    M. A. Tricerri, “Evolutionary and structural constraints influencing apolipoprotein
    A‐I amyloid behavior,” <i>Proteins: Structure, Function, and Bioinformatics</i>,
    vol. 90, no. 1. Wiley, pp. 258–269, 2022.'
  ista: 'Gisonno RA, Masson T, Ramella NA, Barrera EE, Romanowski V, Tricerri MA.
    2022. Evolutionary and structural constraints influencing apolipoprotein A‐I amyloid
    behavior. Proteins: Structure, Function, and Bioinformatics. 90(1), 258–269.'
  mla: 'Gisonno, Romina A., et al. “Evolutionary and Structural Constraints Influencing
    Apolipoprotein A‐I Amyloid Behavior.” <i>Proteins: Structure, Function, and Bioinformatics</i>,
    vol. 90, no. 1, Wiley, 2022, pp. 258–69, doi:<a href="https://doi.org/10.1002/prot.26217">10.1002/prot.26217</a>.'
  short: 'R.A. Gisonno, T. Masson, N.A. Ramella, E.E. Barrera, V. Romanowski, M.A.
    Tricerri, Proteins: Structure, Function, and Bioinformatics 90 (2022) 258–269.'
corr_author: '1'
date_created: 2024-04-03T07:49:53Z
date_published: 2022-01-01T00:00:00Z
date_updated: 2024-10-09T21:08:44Z
day: '01'
department:
- _id: MaJö
doi: 10.1002/prot.26217
external_id:
  pmid:
  - '34414600'
intvolume: '        90'
issue: '1'
keyword:
- Molecular Biology
- Biochemistry
- Structural Biology
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1101/2020.09.18.304337
month: '01'
oa: 1
oa_version: Preprint
page: 258-269
pmid: 1
publication: 'Proteins: Structure, Function, and Bioinformatics'
publication_identifier:
  eissn:
  - 1097-0134
  issn:
  - 0887-3585
publication_status: published
publisher: Wiley
quality_controlled: '1'
status: public
title: Evolutionary and structural constraints influencing apolipoprotein A‐I amyloid
  behavior
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 90
year: '2022'
...
---
_id: '10566'
abstract:
- lang: eng
  text: A versatile, scalable, room temperature and surfactant-free route for the
    synthesis of metal chalcogenide nanoparticles in aqueous solution is detailed
    here for the production of PbS and Cu-doped PbS nanoparticles. Subsequently, nanoparticles
    are annealed in a reducing atmosphere to remove surface oxide, and consolidated
    into dense polycrystalline materials by means of spark plasma sintering. By characterizing
    the transport properties of the sintered material, we observe the annealing step
    and the incorporation of Cu to play a key role in promoting the thermoelectric
    performance of PbS. The presence of Cu allows improving the electrical conductivity
    by increasing the charge carrier concentration and simultaneously maintaining
    a large charge carrier mobility, which overall translates into record power factors
    at ambient temperature, 2.3 mWm-1K−2. Simultaneously, the lattice thermal conductivity
    decreases with the introduction of Cu, leading to a record high ZT = 0.37 at room
    temperature and ZT = 1.22 at 773 K. Besides, a record average ZTave = 0.76 is
    demonstrated in the temperature range 320–773 K for n-type Pb0.955Cu0.045S.
acknowledgement: This work was supported by the European Regional Development Funds.
  MYL, YZ, DWY and KX thank the China Scholarship Council for scholarship support.
  YL acknowledges funding from the European Union's Horizon 2020 research and innovation
  program under the Marie Sklodowska-Curie grant agreement No. 754411 and the funding
  for scientific research startup of Hefei University of Technology (No. 13020-03712021049).
  MI acknowledges funding from IST Austria and the Werner Siemens Foundation. CC acknowledges
  funding from the FWF “Lise Meitner Fellowship” grant agreement M 2889-N. TZ has
  received funding from the CSC-UAB PhD scholarship program. ICN2 acknowledges funding
  from Generalitat de Catalunya 2017 SGR 327. ICN2 thanks support from the project
  NANOGEN (PID2020-116093RB-C43), funded by MCIN/ AEI/10.13039/501100011033/. ICN2
  is supported by the Severo Ochoa program from Spanish MINECO (Grant No. SEV-2017-0706)
  and is funded by the CERCA Programme / Generalitat de Catalunya. Part of the present
  work has been performed in the framework of Universitat Autònoma de Barcelona Materials
  Science PhD program.
article_number: '133837'
article_processing_charge: No
article_type: original
author:
- first_name: Mengyao
  full_name: Li, Mengyao
  last_name: Li
- first_name: Yu
  full_name: Liu, Yu
  id: 2A70014E-F248-11E8-B48F-1D18A9856A87
  last_name: Liu
  orcid: 0000-0001-7313-6740
- first_name: Yu
  full_name: Zhang, Yu
  last_name: Zhang
- first_name: Cheng
  full_name: Chang, Cheng
  id: 9E331C2E-9F27-11E9-AE48-5033E6697425
  last_name: Chang
  orcid: 0000-0002-9515-4277
- first_name: Ting
  full_name: Zhang, Ting
  last_name: Zhang
- first_name: Dawei
  full_name: Yang, Dawei
  last_name: Yang
- first_name: Ke
  full_name: Xiao, Ke
  last_name: Xiao
- first_name: Jordi
  full_name: Arbiol, Jordi
  last_name: Arbiol
- first_name: Maria
  full_name: Ibáñez, Maria
  id: 43C61214-F248-11E8-B48F-1D18A9856A87
  last_name: Ibáñez
  orcid: 0000-0001-5013-2843
- first_name: Andreu
  full_name: Cabot, Andreu
  last_name: Cabot
citation:
  ama: Li M, Liu Y, Zhang Y, et al. Room temperature aqueous-based synthesis of copper-doped
    lead sulfide nanoparticles for thermoelectric application. <i>Chemical Engineering
    Journal</i>. 2022;433. doi:<a href="https://doi.org/10.1016/j.cej.2021.133837">10.1016/j.cej.2021.133837</a>
  apa: Li, M., Liu, Y., Zhang, Y., Chang, C., Zhang, T., Yang, D., … Cabot, A. (2022).
    Room temperature aqueous-based synthesis of copper-doped lead sulfide nanoparticles
    for thermoelectric application. <i>Chemical Engineering Journal</i>. Elsevier.
    <a href="https://doi.org/10.1016/j.cej.2021.133837">https://doi.org/10.1016/j.cej.2021.133837</a>
  chicago: Li, Mengyao, Yu Liu, Yu Zhang, Cheng Chang, Ting Zhang, Dawei Yang, Ke
    Xiao, Jordi Arbiol, Maria Ibáñez, and Andreu Cabot. “Room Temperature Aqueous-Based
    Synthesis of Copper-Doped Lead Sulfide Nanoparticles for Thermoelectric Application.”
    <i>Chemical Engineering Journal</i>. Elsevier, 2022. <a href="https://doi.org/10.1016/j.cej.2021.133837">https://doi.org/10.1016/j.cej.2021.133837</a>.
  ieee: M. Li <i>et al.</i>, “Room temperature aqueous-based synthesis of copper-doped
    lead sulfide nanoparticles for thermoelectric application,” <i>Chemical Engineering
    Journal</i>, vol. 433. Elsevier, 2022.
  ista: Li M, Liu Y, Zhang Y, Chang C, Zhang T, Yang D, Xiao K, Arbiol J, Ibáñez M,
    Cabot A. 2022. Room temperature aqueous-based synthesis of copper-doped lead sulfide
    nanoparticles for thermoelectric application. Chemical Engineering Journal. 433,
    133837.
  mla: Li, Mengyao, et al. “Room Temperature Aqueous-Based Synthesis of Copper-Doped
    Lead Sulfide Nanoparticles for Thermoelectric Application.” <i>Chemical Engineering
    Journal</i>, vol. 433, 133837, Elsevier, 2022, doi:<a href="https://doi.org/10.1016/j.cej.2021.133837">10.1016/j.cej.2021.133837</a>.
  short: M. Li, Y. Liu, Y. Zhang, C. Chang, T. Zhang, D. Yang, K. Xiao, J. Arbiol,
    M. Ibáñez, A. Cabot, Chemical Engineering Journal 433 (2022).
corr_author: '1'
date_created: 2021-12-19T23:01:33Z
date_published: 2022-04-01T00:00:00Z
date_updated: 2025-04-14T07:43:48Z
day: '01'
department:
- _id: MaIb
doi: 10.1016/j.cej.2021.133837
ec_funded: 1
external_id:
  isi:
  - '000773425200006'
intvolume: '       433'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://ddd.uab.cat/pub/artpub/2022/270830/10.1016j.cej.2021.133837.pdf
month: '04'
oa: 1
oa_version: Submitted Version
project:
- _id: 260C2330-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '754411'
  name: ISTplus - Postdoctoral Fellowships
- _id: 9B8804FC-BA93-11EA-9121-9846C619BF3A
  grant_number: M02889
  name: Bottom-up Engineering for Thermoelectric Applications
- _id: 9B8F7476-BA93-11EA-9121-9846C619BF3A
  name: 'HighTE: The Werner Siemens Laboratory for the High Throughput Discovery of
    Semiconductors for Waste Heat Recovery'
publication: Chemical Engineering Journal
publication_identifier:
  issn:
  - 1385-8947
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Room temperature aqueous-based synthesis of copper-doped lead sulfide nanoparticles
  for thermoelectric application
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 433
year: '2022'
...
---
_id: '10583'
abstract:
- lang: eng
  text: The synthetic strigolactone (SL) analog, rac-GR24, has been instrumental in
    studying the role of SLs as well as karrikins because it activates the receptors
    DWARF14 (D14) and KARRIKIN INSENSITIVE 2 (KAI2) of their signaling pathways, respectively.
    Treatment with rac-GR24 modifies the root architecture at different levels, such
    as decreasing the lateral root density (LRD), while promoting root hair elongation
    or flavonol accumulation. Previously, we have shown that the flavonol biosynthesis
    is transcriptionally activated in the root by rac-GR24 treatment, but, thus far,
    the molecular players involved in that response have remained unknown. To get
    an in-depth insight into the changes that occur after the compound is perceived
    by the roots, we compared the root transcriptomes of the wild type and the more
    axillary growth2 (max2) mutant, affected in both SL and karrikin signaling pathways,
    with and without rac-GR24 treatment. Quantitative reverse transcription (qRT)-PCR,
    reporter line analysis and mutant phenotyping indicated that the flavonol response
    and the root hair elongation are controlled by the ELONGATED HYPOCOTYL 5 (HY5)
    and MYB12 transcription factors, but HY5, in contrast to MYB12, affects the LRD
    as well. Furthermore, we identified the transcription factors TARGET OF MONOPTEROS
    5 (TMO5) and TMO5 LIKE1 as negative and the Mediator complex as positive regulators
    of the rac-GR24 effect on LRD. Altogether, hereby, we get closer toward understanding
    the molecular mechanisms that underlay the rac-GR24 responses in the root.
acknowledgement: The authors thank Ralf Stracke (Bielefeld University, Bielefeld,
  Germany) for providing the myb mutants and their colleagues Bert De Rybel for the
  tmo5t;mo5l1 double mutant, Boris Parizot for tips on the RNA-seq analysis, Veronique
  Storme for statistical help on both the RNA-seq and lateral root density, and Martine
  De Cock for help in preparing the manuscript.
article_processing_charge: No
article_type: original
author:
- first_name: Sylwia
  full_name: Struk, Sylwia
  last_name: Struk
- first_name: Lukas
  full_name: Braem, Lukas
  last_name: Braem
- first_name: Cedrick
  full_name: Matthys, Cedrick
  last_name: Matthys
- first_name: Alan
  full_name: Walton, Alan
  last_name: Walton
- first_name: Nick
  full_name: Vangheluwe, Nick
  last_name: Vangheluwe
- first_name: Stan
  full_name: Van Praet, Stan
  last_name: Van Praet
- first_name: Lingxiang
  full_name: Jiang, Lingxiang
  last_name: Jiang
- first_name: Pawel
  full_name: Baster, Pawel
  id: 3028BD74-F248-11E8-B48F-1D18A9856A87
  last_name: Baster
- first_name: Carolien
  full_name: De Cuyper, Carolien
  last_name: De Cuyper
- first_name: Francois-Didier
  full_name: Boyer, Francois-Didier
  last_name: Boyer
- first_name: Elisabeth
  full_name: Stes, Elisabeth
  last_name: Stes
- first_name: Tom
  full_name: Beeckman, Tom
  last_name: Beeckman
- first_name: Jiří
  full_name: Friml, Jiří
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
- first_name: Kris
  full_name: Gevaert, Kris
  last_name: Gevaert
- first_name: Sofie
  full_name: Goormachtig, Sofie
  last_name: Goormachtig
citation:
  ama: Struk S, Braem L, Matthys C, et al. Transcriptional analysis in the Arabidopsis
    roots reveals new regulators that link rac-GR24 treatment with changes in flavonol
    accumulation, root hair elongation and lateral root density. <i>Plant &#38; Cell
    Physiology</i>. 2022;63(1):104-119. doi:<a href="https://doi.org/10.1093/pcp/pcab149">10.1093/pcp/pcab149</a>
  apa: Struk, S., Braem, L., Matthys, C., Walton, A., Vangheluwe, N., Van Praet, S.,
    … Goormachtig, S. (2022). Transcriptional analysis in the Arabidopsis roots reveals
    new regulators that link rac-GR24 treatment with changes in flavonol accumulation,
    root hair elongation and lateral root density. <i>Plant &#38; Cell Physiology</i>.
    Oxford University Press. <a href="https://doi.org/10.1093/pcp/pcab149">https://doi.org/10.1093/pcp/pcab149</a>
  chicago: Struk, Sylwia, Lukas Braem, Cedrick Matthys, Alan Walton, Nick Vangheluwe,
    Stan Van Praet, Lingxiang Jiang, et al. “Transcriptional Analysis in the Arabidopsis
    Roots Reveals New Regulators That Link Rac-GR24 Treatment with Changes in Flavonol
    Accumulation, Root Hair Elongation and Lateral Root Density.” <i>Plant &#38; Cell
    Physiology</i>. Oxford University Press, 2022. <a href="https://doi.org/10.1093/pcp/pcab149">https://doi.org/10.1093/pcp/pcab149</a>.
  ieee: S. Struk <i>et al.</i>, “Transcriptional analysis in the Arabidopsis roots
    reveals new regulators that link rac-GR24 treatment with changes in flavonol accumulation,
    root hair elongation and lateral root density,” <i>Plant &#38; Cell Physiology</i>,
    vol. 63, no. 1. Oxford University Press, pp. 104–119, 2022.
  ista: Struk S, Braem L, Matthys C, Walton A, Vangheluwe N, Van Praet S, Jiang L,
    Baster P, De Cuyper C, Boyer F-D, Stes E, Beeckman T, Friml J, Gevaert K, Goormachtig
    S. 2022. Transcriptional analysis in the Arabidopsis roots reveals new regulators
    that link rac-GR24 treatment with changes in flavonol accumulation, root hair
    elongation and lateral root density. Plant &#38; Cell Physiology. 63(1), 104–119.
  mla: Struk, Sylwia, et al. “Transcriptional Analysis in the Arabidopsis Roots Reveals
    New Regulators That Link Rac-GR24 Treatment with Changes in Flavonol Accumulation,
    Root Hair Elongation and Lateral Root Density.” <i>Plant &#38; Cell Physiology</i>,
    vol. 63, no. 1, Oxford University Press, 2022, pp. 104–19, doi:<a href="https://doi.org/10.1093/pcp/pcab149">10.1093/pcp/pcab149</a>.
  short: S. Struk, L. Braem, C. Matthys, A. Walton, N. Vangheluwe, S. Van Praet, L.
    Jiang, P. Baster, C. De Cuyper, F.-D. Boyer, E. Stes, T. Beeckman, J. Friml, K.
    Gevaert, S. Goormachtig, Plant &#38; Cell Physiology 63 (2022) 104–119.
date_created: 2021-12-28T11:44:18Z
date_published: 2022-01-21T00:00:00Z
date_updated: 2023-08-02T13:40:43Z
day: '21'
department:
- _id: JiFr
doi: 10.1093/pcp/pcab149
external_id:
  isi:
  - '000877899400009'
  pmid:
  - '34791413'
intvolume: '        63'
isi: 1
issue: '1'
keyword:
- flavonols
- MAX2
- rac-Gr24
- RNA-seq
- root development
- transcriptional regulation
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1093/pcp/pcab149
month: '01'
oa: 1
oa_version: Published Version
page: 104-119
pmid: 1
publication: Plant & Cell Physiology
publication_identifier:
  eissn:
  - 1471-9053
  issn:
  - 0032-0781
publication_status: published
publisher: Oxford University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Transcriptional analysis in the Arabidopsis roots reveals new regulators that
  link rac-GR24 treatment with changes in flavonol accumulation, root hair elongation
  and lateral root density
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 63
year: '2022'
...
---
_id: '10584'
abstract:
- lang: eng
  text: Electrically tunable lenses (ETLs) are those with the ability to alter their
    optical power in response to an electric signal. This feature allows such systems
    to not only image the areas of interest but also obtain spatial depth perception
    (depth of field, DOF). The aim of the present study was to develop an ETL-based
    imaging system for quantitative surface analysis. Firstly, the system was calibrated
    to achieve high depth resolution, warranting the accurate measurement of the depth
    and to account for and correct any influences from external factors on the ETL.
    This was completed using the Tenengrad operator which effectively identified the
    plane of best focus as demonstrated by the linear relationship between the control
    current applied to the ETL and the height at which the optical system focuses.
    The system was then employed to measure amplitude, spatial, hybrid, and volume
    surface texture parameters of a model material (pharmaceutical dosage form) which
    were validated against the parameters obtained using a previously validated surface
    texture analysis technique, optical profilometry. There were no statistically
    significant differences between the surface texture parameters measured by the
    techniques, highlighting the potential application of ETL-based imaging systems
    as an easily adaptable and low-cost alternative surface texture analysis technique
    to conventional microscopy techniques
acknowledgement: The authors acknowledge the financial assistance provided by the
  University of Huddersfield.
article_number: '17'
article_processing_charge: Yes
article_type: original
author:
- first_name: Jorabar Singh
  full_name: Nirwan, Jorabar Singh
  last_name: Nirwan
- first_name: Shan
  full_name: Lou, Shan
  last_name: Lou
- first_name: Saqib
  full_name: Hussain, Saqib
  last_name: Hussain
- first_name: Muhammad
  full_name: Nauman, Muhammad
  id: 32c21954-2022-11eb-9d5f-af9f93c24e71
  last_name: Nauman
  orcid: 0000-0002-2111-4846
- first_name: Tariq
  full_name: Hussain, Tariq
  last_name: Hussain
- first_name: Barbara R.
  full_name: Conway, Barbara R.
  last_name: Conway
- first_name: Muhammad Usman
  full_name: Ghori, Muhammad Usman
  last_name: Ghori
citation:
  ama: Nirwan JS, Lou S, Hussain S, et al. Electrically tunable lens (ETL) - based
    variable focus imaging system for parametric surface texture analysis of materials.
    <i>Micromachines</i>. 2022;13(1). doi:<a href="https://doi.org/10.3390/mi13010017">10.3390/mi13010017</a>
  apa: Nirwan, J. S., Lou, S., Hussain, S., Nauman, M., Hussain, T., Conway, B. R.,
    &#38; Ghori, M. U. (2022). Electrically tunable lens (ETL) - based variable focus
    imaging system for parametric surface texture analysis of materials. <i>Micromachines</i>.
    MDPI. <a href="https://doi.org/10.3390/mi13010017">https://doi.org/10.3390/mi13010017</a>
  chicago: Nirwan, Jorabar Singh, Shan Lou, Saqib Hussain, Muhammad Nauman, Tariq
    Hussain, Barbara R. Conway, and Muhammad Usman Ghori. “Electrically Tunable Lens
    (ETL) - Based Variable Focus Imaging System for Parametric Surface Texture Analysis
    of Materials.” <i>Micromachines</i>. MDPI, 2022. <a href="https://doi.org/10.3390/mi13010017">https://doi.org/10.3390/mi13010017</a>.
  ieee: J. S. Nirwan <i>et al.</i>, “Electrically tunable lens (ETL) - based variable
    focus imaging system for parametric surface texture analysis of materials,” <i>Micromachines</i>,
    vol. 13, no. 1. MDPI, 2022.
  ista: Nirwan JS, Lou S, Hussain S, Nauman M, Hussain T, Conway BR, Ghori MU. 2022.
    Electrically tunable lens (ETL) - based variable focus imaging system for parametric
    surface texture analysis of materials. Micromachines. 13(1), 17.
  mla: Nirwan, Jorabar Singh, et al. “Electrically Tunable Lens (ETL) - Based Variable
    Focus Imaging System for Parametric Surface Texture Analysis of Materials.” <i>Micromachines</i>,
    vol. 13, no. 1, 17, MDPI, 2022, doi:<a href="https://doi.org/10.3390/mi13010017">10.3390/mi13010017</a>.
  short: J.S. Nirwan, S. Lou, S. Hussain, M. Nauman, T. Hussain, B.R. Conway, M.U.
    Ghori, Micromachines 13 (2022).
date_created: 2022-01-02T23:01:33Z
date_published: 2022-01-01T00:00:00Z
date_updated: 2023-08-09T10:16:10Z
day: '01'
ddc:
- '620'
department:
- _id: KiMo
doi: 10.3390/mi13010017
external_id:
  isi:
  - '000758547200001'
file:
- access_level: open_access
  checksum: 5d062cae3f1acb251cacb21021724c4e
  content_type: application/pdf
  creator: alisjak
  date_created: 2022-01-03T13:43:01Z
  date_updated: 2022-01-03T13:43:01Z
  file_id: '10601'
  file_name: 2021_Micromachines_Singh.pdf
  file_size: 5370675
  relation: main_file
  success: 1
file_date_updated: 2022-01-03T13:43:01Z
has_accepted_license: '1'
intvolume: '        13'
isi: 1
issue: '1'
keyword:
- surface texture
- electrically tunable lens
- materials
- hypromellose
- surface topography
- surface roughness
- pharmaceutical tablet
- variable focus imaging
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
publication: Micromachines
publication_identifier:
  eissn:
  - 2072-666X
publication_status: published
publisher: MDPI
quality_controlled: '1'
scopus_import: '1'
status: public
title: Electrically tunable lens (ETL) - based variable focus imaging system for parametric
  surface texture analysis of materials
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 13
year: '2022'
...
---
_id: '10587'
abstract:
- lang: eng
  text: Access to a blossoming library of colloidal nanomaterials provides building
    blocks for complex assembled materials. The journey to bring these prospects to
    fruition stands to benefit from the application of advanced processing methods.
    Epitaxially connected nanocrystal (or quantum dot) superlattices present a captivating
    model system for mesocrystals with intriguing emergent properties. The conventional
    processing approach to creating these materials involves assembling and attaching
    the constituent nanocrystals at the interface between two immiscible fluids. Processing
    small liquid volumes of the colloidal nanocrystal solution involves several complexities
    arising from the concurrent spreading, evaporation, assembly, and attachment.
    The ability of inkjet printers to deliver small (typically picoliter) liquid volumes
    with precise positioning is attractive to advance fundamental insights into the
    processing science, and thereby potentially enable new routes to incorporate the
    epitaxially connected superlattices into technology platforms. In this study,
    we identified the processing window of opportunity, including nanocrystal ink
    formulation and printing approach to enable delivery of colloidal nanocrystals
    from an inkjet nozzle onto the surface of a sessile droplet of the immiscible
    subphase. We demonstrate how inkjet printing can be scaled-down to enable the
    fabrication of epitaxially connected superlattices on patterned sub-millimeter
    droplets. We anticipate that insights from this work will spur on future advances
    to enable more mechanistic insights into the assembly processes and new avenues
    to create high-fidelity superlattices.
acknowledgement: This project was supported by the US Department of Energy through
  award (No. DE-SC0018026). The work was performed in part at the Cornell NanoScale
  Facility, a member of the National Nanotechnology Coordinated Infrastructure (NNCI),
  which is supported by the National Science Foundation (No. NNCI-1542081) and in
  part at the Cornell Center for Materials Research with funding from the NSF MRSEC
  program (No. DMR-1719875). The authors thank Beth Rhodes for the technical assistance
  with inkjet printing, and E. Peretz and Q. Wen for the early exploratory experiments.
article_processing_charge: No
article_type: original
author:
- first_name: Daniel
  full_name: Balazs, Daniel
  id: 302BADF6-85FC-11EA-9E3B-B9493DDC885E
  last_name: Balazs
  orcid: 0000-0001-7597-043X
- first_name: N. Deniz
  full_name: Erkan, N. Deniz
  last_name: Erkan
- first_name: Michelle
  full_name: Quien, Michelle
  last_name: Quien
- first_name: Tobias
  full_name: Hanrath, Tobias
  last_name: Hanrath
citation:
  ama: Balazs D, Erkan ND, Quien M, Hanrath T. Inkjet printing of epitaxially connected
    nanocrystal superlattices. <i>Nano Research</i>. 2022;15(5):4536–4543. doi:<a
    href="https://doi.org/10.1007/s12274-021-4022-7">10.1007/s12274-021-4022-7</a>
  apa: Balazs, D., Erkan, N. D., Quien, M., &#38; Hanrath, T. (2022). Inkjet printing
    of epitaxially connected nanocrystal superlattices. <i>Nano Research</i>. Springer
    Nature. <a href="https://doi.org/10.1007/s12274-021-4022-7">https://doi.org/10.1007/s12274-021-4022-7</a>
  chicago: Balazs, Daniel, N. Deniz Erkan, Michelle Quien, and Tobias Hanrath. “Inkjet
    Printing of Epitaxially Connected Nanocrystal Superlattices.” <i>Nano Research</i>.
    Springer Nature, 2022. <a href="https://doi.org/10.1007/s12274-021-4022-7">https://doi.org/10.1007/s12274-021-4022-7</a>.
  ieee: D. Balazs, N. D. Erkan, M. Quien, and T. Hanrath, “Inkjet printing of epitaxially
    connected nanocrystal superlattices,” <i>Nano Research</i>, vol. 15, no. 5. Springer
    Nature, pp. 4536–4543, 2022.
  ista: Balazs D, Erkan ND, Quien M, Hanrath T. 2022. Inkjet printing of epitaxially
    connected nanocrystal superlattices. Nano Research. 15(5), 4536–4543.
  mla: Balazs, Daniel, et al. “Inkjet Printing of Epitaxially Connected Nanocrystal
    Superlattices.” <i>Nano Research</i>, vol. 15, no. 5, Springer Nature, 2022, pp.
    4536–4543, doi:<a href="https://doi.org/10.1007/s12274-021-4022-7">10.1007/s12274-021-4022-7</a>.
  short: D. Balazs, N.D. Erkan, M. Quien, T. Hanrath, Nano Research 15 (2022) 4536–4543.
date_created: 2022-01-02T23:01:34Z
date_published: 2022-05-01T00:00:00Z
date_updated: 2023-08-02T13:47:21Z
day: '01'
department:
- _id: MaIb
doi: 10.1007/s12274-021-4022-7
external_id:
  isi:
  - '000735340300001'
intvolume: '        15'
isi: 1
issue: '5'
keyword:
- interfacial assembly
- colloidal nanocrystal
- superlattice
- inkjet printing
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://www.osti.gov/biblio/1837946
month: '05'
oa: 1
oa_version: Submitted Version
page: 4536–4543
publication: Nano Research
publication_identifier:
  eissn:
  - 1998-0000
  issn:
  - 1998-0124
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Inkjet printing of epitaxially connected nanocrystal superlattices
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 15
year: '2022'
...
---
_id: '10588'
abstract:
- lang: eng
  text: We prove the Sobolev-to-Lipschitz property for metric measure spaces satisfying
    the quasi curvature-dimension condition recently introduced in Milman (Commun
    Pure Appl Math, to appear). We provide several applications to properties of the
    corresponding heat semigroup. In particular, under the additional assumption of
    infinitesimal Hilbertianity, we show the Varadhan short-time asymptotics for the
    heat semigroup with respect to the distance, and prove the irreducibility of the
    heat semigroup. These results apply in particular to large classes of (ideal)
    sub-Riemannian manifolds.
acknowledgement: "The authors are grateful to Dr. Bang-Xian Han for helpful discussions
  on the Sobolev-to-Lipschitz property on metric measure spaces, and to Professor
  Kazuhiro Kuwae, Professor Emanuel Milman, Dr. Giorgio Stefani, and Dr. Gioacchino
  Antonelli for reading a preliminary version of this work and for their valuable
  comments and suggestions. Finally, they wish to express their gratitude to two anonymous
  Reviewers whose suggestions improved the presentation of this work.\r\n\r\nL.D.S.
  gratefully acknowledges funding of his position by the Austrian Science Fund (FWF)
  grant F65, and by the European Research Council (ERC, grant No. 716117, awarded
  to Prof. Dr. Jan Maas).\r\n\r\nK.S. gratefully acknowledges funding by: the JSPS
  Overseas Research Fellowships, Grant Nr. 290142; World Premier International Research
  Center Initiative (WPI), MEXT, Japan; JSPS Grant-in-Aid for Scientific Research
  on Innovative Areas “Discrete Geometric Analysis for Materials Design”, Grant Number
  17H06465; and the Alexander von Humboldt Stiftung, Humboldt-Forschungsstipendium."
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Lorenzo
  full_name: Dello Schiavo, Lorenzo
  id: ECEBF480-9E4F-11EA-B557-B0823DDC885E
  last_name: Dello Schiavo
  orcid: 0000-0002-9881-6870
- first_name: Kohei
  full_name: Suzuki, Kohei
  last_name: Suzuki
citation:
  ama: Dello Schiavo L, Suzuki K. Sobolev-to-Lipschitz property on QCD- spaces and
    applications. <i>Mathematische Annalen</i>. 2022;384:1815-1832. doi:<a href="https://doi.org/10.1007/s00208-021-02331-2">10.1007/s00208-021-02331-2</a>
  apa: Dello Schiavo, L., &#38; Suzuki, K. (2022). Sobolev-to-Lipschitz property on
    QCD- spaces and applications. <i>Mathematische Annalen</i>. Springer Nature. <a
    href="https://doi.org/10.1007/s00208-021-02331-2">https://doi.org/10.1007/s00208-021-02331-2</a>
  chicago: Dello Schiavo, Lorenzo, and Kohei Suzuki. “Sobolev-to-Lipschitz Property
    on QCD- Spaces and Applications.” <i>Mathematische Annalen</i>. Springer Nature,
    2022. <a href="https://doi.org/10.1007/s00208-021-02331-2">https://doi.org/10.1007/s00208-021-02331-2</a>.
  ieee: L. Dello Schiavo and K. Suzuki, “Sobolev-to-Lipschitz property on QCD- spaces
    and applications,” <i>Mathematische Annalen</i>, vol. 384. Springer Nature, pp.
    1815–1832, 2022.
  ista: Dello Schiavo L, Suzuki K. 2022. Sobolev-to-Lipschitz property on QCD- spaces
    and applications. Mathematische Annalen. 384, 1815–1832.
  mla: Dello Schiavo, Lorenzo, and Kohei Suzuki. “Sobolev-to-Lipschitz Property on
    QCD- Spaces and Applications.” <i>Mathematische Annalen</i>, vol. 384, Springer
    Nature, 2022, pp. 1815–32, doi:<a href="https://doi.org/10.1007/s00208-021-02331-2">10.1007/s00208-021-02331-2</a>.
  short: L. Dello Schiavo, K. Suzuki, Mathematische Annalen 384 (2022) 1815–1832.
corr_author: '1'
date_created: 2022-01-02T23:01:35Z
date_published: 2022-12-01T00:00:00Z
date_updated: 2025-04-14T07:27:46Z
day: '01'
ddc:
- '510'
department:
- _id: JaMa
doi: 10.1007/s00208-021-02331-2
ec_funded: 1
external_id:
  arxiv:
  - '2110.05137'
  isi:
  - '000734150200001'
file:
- access_level: open_access
  checksum: 2593abbf195e38efa93b6006b1e90eb1
  content_type: application/pdf
  creator: alisjak
  date_created: 2022-01-03T11:08:31Z
  date_updated: 2022-01-03T11:08:31Z
  file_id: '10596'
  file_name: 2021_MathAnn_DelloSchiavo.pdf
  file_size: 410090
  relation: main_file
  success: 1
file_date_updated: 2022-01-03T11:08:31Z
has_accepted_license: '1'
intvolume: '       384'
isi: 1
keyword:
- quasi curvature-dimension condition
- sub-riemannian geometry
- Sobolev-to-Lipschitz property
- Varadhan short-time asymptotics
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
page: 1815-1832
project:
- _id: 256E75B8-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '716117'
  name: Optimal Transport and Stochastic Dynamics
- _id: fc31cba2-9c52-11eb-aca3-ff467d239cd2
  grant_number: F6504
  name: Taming Complexity in Partial Differential Systems
- _id: B67AFEDC-15C9-11EA-A837-991A96BB2854
  name: IST Austria Open Access Fund
publication: Mathematische Annalen
publication_identifier:
  eissn:
  - 1432-1807
  issn:
  - 0025-5831
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Sobolev-to-Lipschitz property on QCD- spaces and applications
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 384
year: '2022'
...
---
_id: '10589'
abstract:
- lang: eng
  text: Superconducting devices ubiquitously have an excess of broken Cooper pairs,
    which can hamper their performance. It is widely believed that external radiation
    is responsible but a study now suggests there must be an additional, unknown source.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Andrew P
  full_name: Higginbotham, Andrew P
  id: 4AD6785A-F248-11E8-B48F-1D18A9856A87
  last_name: Higginbotham
  orcid: 0000-0003-2607-2363
citation:
  ama: Higginbotham AP. A secret source. <i>Nature Physics</i>. 2022;18:126. doi:<a
    href="https://doi.org/10.1038/s41567-021-01459-x">10.1038/s41567-021-01459-x</a>
  apa: Higginbotham, A. P. (2022). A secret source. <i>Nature Physics</i>. Springer
    Nature. <a href="https://doi.org/10.1038/s41567-021-01459-x">https://doi.org/10.1038/s41567-021-01459-x</a>
  chicago: Higginbotham, Andrew P. “A Secret Source.” <i>Nature Physics</i>. Springer
    Nature, 2022. <a href="https://doi.org/10.1038/s41567-021-01459-x">https://doi.org/10.1038/s41567-021-01459-x</a>.
  ieee: A. P. Higginbotham, “A secret source,” <i>Nature Physics</i>, vol. 18. Springer
    Nature, p. 126, 2022.
  ista: Higginbotham AP. 2022. A secret source. Nature Physics. 18, 126.
  mla: Higginbotham, Andrew P. “A Secret Source.” <i>Nature Physics</i>, vol. 18,
    Springer Nature, 2022, p. 126, doi:<a href="https://doi.org/10.1038/s41567-021-01459-x">10.1038/s41567-021-01459-x</a>.
  short: A.P. Higginbotham, Nature Physics 18 (2022) 126.
corr_author: '1'
date_created: 2022-01-02T23:01:35Z
date_published: 2022-02-01T00:00:00Z
date_updated: 2024-10-09T21:01:21Z
day: '01'
department:
- _id: AnHi
doi: 10.1038/s41567-021-01459-x
external_id:
  isi:
  - '000733431000007'
intvolume: '        18'
isi: 1
keyword:
- superconducting devices
- superconducting properties and materials
language:
- iso: eng
month: '02'
oa_version: None
page: '126'
publication: Nature Physics
publication_identifier:
  eissn:
  - 1745-2481
  issn:
  - 1745-2473
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: A secret source
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 18
year: '2022'
...
---
_id: '10600'
abstract:
- lang: eng
  text: We show that recent results on adiabatic theory for interacting gapped many-body
    systems on finite lattices remain valid in the thermodynamic limit. More precisely,
    we prove a generalized super-adiabatic theorem for the automorphism group describing
    the infinite volume dynamics on the quasi-local algebra of observables. The key
    assumption is the existence of a sequence of gapped finite volume Hamiltonians,
    which generates the same infinite volume dynamics in the thermodynamic limit.
    Our adiabatic theorem also holds for certain perturbations of gapped ground states
    that close the spectral gap (so it is also an adiabatic theorem for resonances
    and, in this sense, “generalized”), and it provides an adiabatic approximation
    to all orders in the adiabatic parameter (a property often called “super-adiabatic”).
    In addition to the existing results for finite lattices, we also perform a resummation
    of the adiabatic expansion and allow for observables that are not strictly local.
    Finally, as an application, we prove the validity of linear and higher order response
    theory for our class of perturbations for infinite systems. While we consider
    the result and its proof as new and interesting in itself, we also lay the foundation
    for the proof of an adiabatic theorem for systems with a gap only in the bulk,
    which will be presented in a follow-up article.
acknowledgement: J.H. acknowledges partial financial support from ERC Advanced Grant
  “RMTBeyond” No. 101020331.
article_number: '011901'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Sven Joscha
  full_name: Henheik, Sven Joscha
  id: 31d731d7-d235-11ea-ad11-b50331c8d7fb
  last_name: Henheik
  orcid: 0000-0003-1106-327X
- first_name: Stefan
  full_name: Teufel, Stefan
  last_name: Teufel
citation:
  ama: 'Henheik SJ, Teufel S. Adiabatic theorem in the thermodynamic limit: Systems
    with a uniform gap. <i>Journal of Mathematical Physics</i>. 2022;63(1). doi:<a
    href="https://doi.org/10.1063/5.0051632">10.1063/5.0051632</a>'
  apa: 'Henheik, S. J., &#38; Teufel, S. (2022). Adiabatic theorem in the thermodynamic
    limit: Systems with a uniform gap. <i>Journal of Mathematical Physics</i>. AIP
    Publishing. <a href="https://doi.org/10.1063/5.0051632">https://doi.org/10.1063/5.0051632</a>'
  chicago: 'Henheik, Sven Joscha, and Stefan Teufel. “Adiabatic Theorem in the Thermodynamic
    Limit: Systems with a Uniform Gap.” <i>Journal of Mathematical Physics</i>. AIP
    Publishing, 2022. <a href="https://doi.org/10.1063/5.0051632">https://doi.org/10.1063/5.0051632</a>.'
  ieee: 'S. J. Henheik and S. Teufel, “Adiabatic theorem in the thermodynamic limit:
    Systems with a uniform gap,” <i>Journal of Mathematical Physics</i>, vol. 63,
    no. 1. AIP Publishing, 2022.'
  ista: 'Henheik SJ, Teufel S. 2022. Adiabatic theorem in the thermodynamic limit:
    Systems with a uniform gap. Journal of Mathematical Physics. 63(1), 011901.'
  mla: 'Henheik, Sven Joscha, and Stefan Teufel. “Adiabatic Theorem in the Thermodynamic
    Limit: Systems with a Uniform Gap.” <i>Journal of Mathematical Physics</i>, vol.
    63, no. 1, 011901, AIP Publishing, 2022, doi:<a href="https://doi.org/10.1063/5.0051632">10.1063/5.0051632</a>.'
  short: S.J. Henheik, S. Teufel, Journal of Mathematical Physics 63 (2022).
date_created: 2022-01-03T12:19:48Z
date_published: 2022-01-03T00:00:00Z
date_updated: 2025-04-14T07:57:17Z
day: '03'
department:
- _id: GradSch
- _id: LaEr
doi: 10.1063/5.0051632
ec_funded: 1
external_id:
  arxiv:
  - '2012.15238'
  isi:
  - '000739446000009'
intvolume: '        63'
isi: 1
issue: '1'
keyword:
- mathematical physics
- statistical and nonlinear physics
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2012.15238
month: '01'
oa: 1
oa_version: Preprint
project:
- _id: 62796744-2b32-11ec-9570-940b20777f1d
  call_identifier: H2020
  grant_number: '101020331'
  name: Random matrices beyond Wigner-Dyson-Mehta
publication: Journal of Mathematical Physics
publication_identifier:
  eissn:
  - 1089-7658
  issn:
  - 0022-2488
publication_status: published
publisher: AIP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Adiabatic theorem in the thermodynamic limit: Systems with a uniform gap'
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 63
year: '2022'
...
---
_id: '10602'
abstract:
- lang: eng
  text: Transforming ω-automata into parity automata is traditionally done using appearance
    records. We present an efficient variant of this idea, tailored to Rabin automata,
    and several optimizations applicable to all appearance records. We compare the
    methods experimentally and show that our method produces significantly smaller
    automata than previous approaches.
acknowledgement: This work is partially funded by the German Research Foundation (DFG)
  projects Verified Model Checkers (No. 317422601) and Statistical Unbounded Verification
  (No. 383882557), and the Alexander von Humboldt Foundation with funds from the German
  Federal Ministry of Education and Research. It is an extended version of [21], including
  all proofs together with further explanations and examples. Moreover, we provide
  a new, more efficient construction based on (total) preorders, unifying previous
  optimizations. Experiments are performed with a new, performant implementation,
  comparing our approach to the current state of the art.
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Jan
  full_name: Kretinsky, Jan
  id: 44CEF464-F248-11E8-B48F-1D18A9856A87
  last_name: Kretinsky
  orcid: 0000-0002-8122-2881
- first_name: Tobias
  full_name: Meggendorfer, Tobias
  id: b21b0c15-30a2-11eb-80dc-f13ca25802e1
  last_name: Meggendorfer
  orcid: 0000-0002-1712-2165
- first_name: Clara
  full_name: Waldmann, Clara
  last_name: Waldmann
- first_name: Maximilian
  full_name: Weininger, Maximilian
  last_name: Weininger
citation:
  ama: Kretinsky J, Meggendorfer T, Waldmann C, Weininger M. Index appearance record
    with preorders. <i>Acta Informatica</i>. 2022;59:585-618. doi:<a href="https://doi.org/10.1007/s00236-021-00412-y">10.1007/s00236-021-00412-y</a>
  apa: Kretinsky, J., Meggendorfer, T., Waldmann, C., &#38; Weininger, M. (2022).
    Index appearance record with preorders. <i>Acta Informatica</i>. Springer Nature.
    <a href="https://doi.org/10.1007/s00236-021-00412-y">https://doi.org/10.1007/s00236-021-00412-y</a>
  chicago: Kretinsky, Jan, Tobias Meggendorfer, Clara Waldmann, and Maximilian Weininger.
    “Index Appearance Record with Preorders.” <i>Acta Informatica</i>. Springer Nature,
    2022. <a href="https://doi.org/10.1007/s00236-021-00412-y">https://doi.org/10.1007/s00236-021-00412-y</a>.
  ieee: J. Kretinsky, T. Meggendorfer, C. Waldmann, and M. Weininger, “Index appearance
    record with preorders,” <i>Acta Informatica</i>, vol. 59. Springer Nature, pp.
    585–618, 2022.
  ista: Kretinsky J, Meggendorfer T, Waldmann C, Weininger M. 2022. Index appearance
    record with preorders. Acta Informatica. 59, 585–618.
  mla: Kretinsky, Jan, et al. “Index Appearance Record with Preorders.” <i>Acta Informatica</i>,
    vol. 59, Springer Nature, 2022, pp. 585–618, doi:<a href="https://doi.org/10.1007/s00236-021-00412-y">10.1007/s00236-021-00412-y</a>.
  short: J. Kretinsky, T. Meggendorfer, C. Waldmann, M. Weininger, Acta Informatica
    59 (2022) 585–618.
corr_author: '1'
date_created: 2022-01-06T12:37:27Z
date_published: 2022-10-01T00:00:00Z
date_updated: 2025-04-15T06:53:08Z
day: '01'
ddc:
- '000'
department:
- _id: KrCh
doi: 10.1007/s00236-021-00412-y
external_id:
  isi:
  - '000735765500001'
file:
- access_level: open_access
  checksum: bf1c195b6aaf59e8530cf9e3a9d731f7
  content_type: application/pdf
  creator: cchlebak
  date_created: 2022-01-07T07:50:31Z
  date_updated: 2022-01-07T07:50:31Z
  file_id: '10603'
  file_name: 2021_ActaInfor_Křetínský.pdf
  file_size: 1066082
  relation: main_file
  success: 1
file_date_updated: 2022-01-07T07:50:31Z
has_accepted_license: '1'
intvolume: '        59'
isi: 1
keyword:
- computer networks and communications
- information systems
- software
language:
- iso: eng
month: '10'
oa: 1
oa_version: Published Version
page: 585-618
project:
- _id: B67AFEDC-15C9-11EA-A837-991A96BB2854
  name: IST Austria Open Access Fund
publication: Acta Informatica
publication_identifier:
  eissn:
  - 1432-0525
  issn:
  - 0001-5903
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Index appearance record with preorders
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 59
year: '2022'
...
---
_id: '10604'
abstract:
- lang: eng
  text: Maternally inherited Wolbachia transinfections are being introduced into natural
    mosquito populations to reduce the transmission of dengue, Zika, and other arboviruses.
    Wolbachia-induced cytoplasmic incompatibility provides a frequency-dependent reproductive
    advantage to infected females that can spread transinfections within and among
    populations. However, because transinfections generally reduce host fitness, they
    tend to spread within populations only after their frequency exceeds a critical
    threshold. This produces bistability with stable equilibrium frequencies at both
    0 and 1, analogous to the bistability produced by underdominance between alleles
    or karyotypes and by population dynamics under Allee effects. Here, we analyze
    how stochastic frequency variation produced by finite population size can facilitate
    the local spread of variants with bistable dynamics into areas where invasion
    is unexpected from deterministic models. Our exemplar is the establishment of
    wMel Wolbachia in the Aedes aegypti population of Pyramid Estates (PE), a small
    community in far north Queensland, Australia. In 2011, wMel was stably introduced
    into Gordonvale, separated from PE by barriers to A. aegypti dispersal. After
    nearly 6 years during which wMel was observed only at low frequencies in PE, corresponding
    to an apparent equilibrium between immigration and selection, wMel rose to fixation
    by 2018. Using analytic approximations and statistical analyses, we demonstrate
    that the observed fixation of wMel at PE is consistent with both stochastic transition
    past an unstable threshold frequency and deterministic transformation produced
    by steady immigration at a rate just above the threshold required for deterministic
    invasion. The indeterminacy results from a delicate balance of parameters needed
    to produce the delayed transition observed. Our analyses suggest that once Wolbachia
    transinfections are established locally through systematic introductions, stochastic
    “threshold crossing” is likely to only minimally enhance spatial spread, providing
    a local ratchet that slightly—but systematically—aids area-wide transformation
    of disease-vector populations in heterogeneous landscapes.
acknowledgement: We thank S. O'Neill, C. Simmons, and the World Mosquito Project for
  providing access to unpublished data. S. Ritchie provided valuable insights into
  Aedes aegypti biology and the literature describing A. aegypti populations near
  Cairns. We thank B. Cooper for help with the figures and D. Shropshire, S. O'Neill,
  S. Ritchie, A. Hoffmann, B. Cooper, and members of the Cooper lab for comments on
  an earlier draft. Comments from three reviewers greatly improved our presentation.
article_processing_charge: No
article_type: original
author:
- first_name: Michael
  full_name: Turelli, Michael
  last_name: Turelli
- first_name: Nicholas H
  full_name: Barton, Nicholas H
  id: 4880FE40-F248-11E8-B48F-1D18A9856A87
  last_name: Barton
  orcid: 0000-0002-8548-5240
citation:
  ama: Turelli M, Barton NH. Why did the Wolbachia transinfection cross the road?
    Drift, deterministic dynamics, and disease control. <i>Evolution Letters</i>.
    2022;6(1):92-105. doi:<a href="https://doi.org/10.1002/evl3.270">10.1002/evl3.270</a>
  apa: Turelli, M., &#38; Barton, N. H. (2022). Why did the Wolbachia transinfection
    cross the road? Drift, deterministic dynamics, and disease control. <i>Evolution
    Letters</i>. Wiley. <a href="https://doi.org/10.1002/evl3.270">https://doi.org/10.1002/evl3.270</a>
  chicago: Turelli, Michael, and Nicholas H Barton. “Why Did the Wolbachia Transinfection
    Cross the Road? Drift, Deterministic Dynamics, and Disease Control.” <i>Evolution
    Letters</i>. Wiley, 2022. <a href="https://doi.org/10.1002/evl3.270">https://doi.org/10.1002/evl3.270</a>.
  ieee: M. Turelli and N. H. Barton, “Why did the Wolbachia transinfection cross the
    road? Drift, deterministic dynamics, and disease control,” <i>Evolution Letters</i>,
    vol. 6, no. 1. Wiley, pp. 92–105, 2022.
  ista: Turelli M, Barton NH. 2022. Why did the Wolbachia transinfection cross the
    road? Drift, deterministic dynamics, and disease control. Evolution Letters. 6(1),
    92–105.
  mla: Turelli, Michael, and Nicholas H. Barton. “Why Did the Wolbachia Transinfection
    Cross the Road? Drift, Deterministic Dynamics, and Disease Control.” <i>Evolution
    Letters</i>, vol. 6, no. 1, Wiley, 2022, pp. 92–105, doi:<a href="https://doi.org/10.1002/evl3.270">10.1002/evl3.270</a>.
  short: M. Turelli, N.H. Barton, Evolution Letters 6 (2022) 92–105.
date_created: 2022-01-09T09:45:17Z
date_published: 2022-02-01T00:00:00Z
date_updated: 2025-06-11T13:45:56Z
day: '01'
ddc:
- '570'
department:
- _id: NiBa
doi: 10.1002/evl3.270
external_id:
  isi:
  - '000754412600008'
  pmid:
  - '35127140'
file:
- access_level: open_access
  checksum: 7e9a37e3b65b480cd7014a6a4a7e460a
  content_type: application/pdf
  creator: dernst
  date_created: 2022-07-29T06:59:10Z
  date_updated: 2022-07-29T06:59:10Z
  file_id: '11689'
  file_name: 2022_EvolutionLetters_Turelli.pdf
  file_size: 2435185
  relation: main_file
  success: 1
file_date_updated: 2022-07-29T06:59:10Z
has_accepted_license: '1'
intvolume: '         6'
isi: 1
issue: '1'
keyword:
- genetics
- ecology
- evolution
- behavior and systematics
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
page: 92-105
pmid: 1
publication: Evolution Letters
publication_identifier:
  eissn:
  - 2056-3744
publication_status: published
publisher: Wiley
quality_controlled: '1'
related_material:
  record:
  - id: '11686'
    relation: research_data
    status: public
scopus_import: '1'
status: public
title: Why did the Wolbachia transinfection cross the road? Drift, deterministic dynamics,
  and disease control
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 6
year: '2022'
...
---
_id: '10608'
abstract:
- lang: eng
  text: We consider infinite-dimensional properties in coarse geometry for hyperspaces
    consisting of finite subsets of metric spaces with the Hausdorff metric. We see
    that several infinite-dimensional properties are preserved by taking the hyperspace
    of subsets with at most n points. On the other hand, we prove that, if a metric
    space contains a sequence of long intervals coarsely, then its hyperspace of finite
    subsets is not coarsely embeddable into any uniformly convex Banach space. As
    a corollary, the hyperspace of finite subsets of the real line is not coarsely
    embeddable into any uniformly convex Banach space. It is also shown that every
    (not necessarily bounded geometry) metric space with straight finite decomposition
    complexity has metric sparsification property.
acknowledgement: We would like to thank the referees for their careful reading and
  the comments that improved our work. The third named author would like to thank
  the Division of Mathematics, Physics and Earth Sciences of the Graduate School of
  Science and Engineering of Ehime University and the second named author for hosting
  his visit in June 2018. Open access funding provided by Institute of Science and
  Technology (IST Austria).
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Thomas
  full_name: Weighill, Thomas
  last_name: Weighill
- first_name: Takamitsu
  full_name: Yamauchi, Takamitsu
  last_name: Yamauchi
- first_name: Nicolò
  full_name: Zava, Nicolò
  id: c8b3499c-7a77-11eb-b046-aa368cbbf2ad
  last_name: Zava
  orcid: 0000-0001-8686-1888
citation:
  ama: Weighill T, Yamauchi T, Zava N. Coarse infinite-dimensionality of hyperspaces
    of finite subsets. <i>European Journal of Mathematics</i>. 2022;8(1):335-355.
    doi:<a href="https://doi.org/10.1007/s40879-021-00515-3">10.1007/s40879-021-00515-3</a>
  apa: Weighill, T., Yamauchi, T., &#38; Zava, N. (2022). Coarse infinite-dimensionality
    of hyperspaces of finite subsets. <i>European Journal of Mathematics</i>. Springer
    Nature. <a href="https://doi.org/10.1007/s40879-021-00515-3">https://doi.org/10.1007/s40879-021-00515-3</a>
  chicago: Weighill, Thomas, Takamitsu Yamauchi, and Nicolò Zava. “Coarse Infinite-Dimensionality
    of Hyperspaces of Finite Subsets.” <i>European Journal of Mathematics</i>. Springer
    Nature, 2022. <a href="https://doi.org/10.1007/s40879-021-00515-3">https://doi.org/10.1007/s40879-021-00515-3</a>.
  ieee: T. Weighill, T. Yamauchi, and N. Zava, “Coarse infinite-dimensionality of
    hyperspaces of finite subsets,” <i>European Journal of Mathematics</i>, vol. 8,
    no. 1. Springer Nature, pp. 335–355, 2022.
  ista: Weighill T, Yamauchi T, Zava N. 2022. Coarse infinite-dimensionality of hyperspaces
    of finite subsets. European Journal of Mathematics. 8(1), 335–355.
  mla: Weighill, Thomas, et al. “Coarse Infinite-Dimensionality of Hyperspaces of
    Finite Subsets.” <i>European Journal of Mathematics</i>, vol. 8, no. 1, Springer
    Nature, 2022, pp. 335–55, doi:<a href="https://doi.org/10.1007/s40879-021-00515-3">10.1007/s40879-021-00515-3</a>.
  short: T. Weighill, T. Yamauchi, N. Zava, European Journal of Mathematics 8 (2022)
    335–355.
date_created: 2022-01-09T23:01:27Z
date_published: 2022-03-01T00:00:00Z
date_updated: 2024-05-22T11:10:22Z
day: '01'
ddc:
- '500'
department:
- _id: HeEd
doi: 10.1007/s40879-021-00515-3
file:
- access_level: open_access
  checksum: ce35cbb2d8c889dc7750719972634ed4
  content_type: application/pdf
  creator: kschuh
  date_created: 2024-05-22T11:10:10Z
  date_updated: 2024-05-22T11:10:10Z
  file_id: '17036'
  file_name: 2022_EuJournalMath_Weighill.pdf
  file_size: 371515
  relation: main_file
  success: 1
file_date_updated: 2024-05-22T11:10:10Z
has_accepted_license: '1'
intvolume: '         8'
issue: '1'
language:
- iso: eng
month: '03'
oa: 1
oa_version: Published Version
page: 335-355
publication: European Journal of Mathematics
publication_identifier:
  eissn:
  - 2199-6768
  issn:
  - 2199-675X
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Coarse infinite-dimensionality of hyperspaces of finite subsets
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 8
year: '2022'
...
---
_id: '10639'
abstract:
- lang: eng
  text: With more than 80 members worldwide, the Orthobunyavirus genus in the Peribunyaviridae
    family is a large genus of enveloped RNA viruses, many of which are emerging pathogens
    in humans and livestock. How orthobunyaviruses (OBVs) penetrate and infect mammalian
    host cells remains poorly characterized. Here, we investigated the entry mechanisms
    of the OBV Germiston (GERV). Viral particles were visualized by cryo-electron
    microscopy and appeared roughly spherical with an average diameter of 98 nm. Labeling
    of the virus with fluorescent dyes did not adversely affect its infectivity and
    allowed the monitoring of single particles in fixed and live cells. Using this
    approach, we found that endocytic internalization of bound viruses was asynchronous
    and occurred within 30-40 min. The virus entered Rab5a+ early endosomes and, subsequently,
    late endosomal vacuoles containing Rab7a but not LAMP-1. Infectious entry did
    not require proteolytic cleavage, and endosomal acidification was sufficient and
    necessary for viral fusion. Acid-activated penetration began 15-25 min after initiation
    of virus internalization and relied on maturation of early endosomes to late endosomes.
    The optimal pH for viral membrane fusion was slightly below 6.0, and penetration
    was hampered when the potassium influx was abolished. Overall, our study provides
    real-time visualization of GERV entry into host cells and demonstrates the importance
    of late endosomal maturation in facilitating OBV penetration.
acknowledged_ssus:
- _id: EM-Fac
acknowledgement: This work  was  supported  by  INRAE  starter  funds, Project IDEXLYON  (University  of  Lyon)
  within  the  Programme  Investissements  d’Avenir  (ANR-16-IDEX-0005),  and  FINOVIAO14
  (Fondation  pour  l’Université  de  Lyon),  all  to  P.Y.L.  This  work  was  also  supported  by
  CellNetworks  Research  Group  funds  and  Deutsche  Forschungsgemeinschaft  (DFG)  funding
  (grant  numbers  LO-2338/1-1  and  LO-2338/3-1)  awarded  to  P.Y.L., Austrian  Science  Fund
  (FWF)  grant  P31445  to  F.K.M.S., a  Chinese  Scholarship  Council (CSC;no.  201904910701)
  fellowship  to   Q.X.,  and  a  ministére  de  l’enseignement  supérieur,  de  la  recherche  et  de
  l’innovation (MESRI) doctoral thesis grant to M.D.
article_number: e02146-21
article_processing_charge: No
article_type: original
author:
- first_name: Stefan
  full_name: Windhaber, Stefan
  last_name: Windhaber
- first_name: Qilin
  full_name: Xin, Qilin
  last_name: Xin
- first_name: Zina M.
  full_name: Uckeley, Zina M.
  last_name: Uckeley
- first_name: Jana
  full_name: Koch, Jana
  last_name: Koch
- first_name: Martin
  full_name: Obr, Martin
  id: 4741CA5A-F248-11E8-B48F-1D18A9856A87
  last_name: Obr
  orcid: 0000-0003-1756-6564
- first_name: Céline
  full_name: Garnier, Céline
  last_name: Garnier
- first_name: Catherine
  full_name: Luengo-Guyonnot, Catherine
  last_name: Luengo-Guyonnot
- first_name: Maëva
  full_name: Duboeuf, Maëva
  last_name: Duboeuf
- first_name: Florian KM
  full_name: Schur, Florian KM
  id: 48AD8942-F248-11E8-B48F-1D18A9856A87
  last_name: Schur
  orcid: 0000-0003-4790-8078
- first_name: Pierre-Yves
  full_name: Lozach, Pierre-Yves
  last_name: Lozach
citation:
  ama: Windhaber S, Xin Q, Uckeley ZM, et al. The Orthobunyavirus Germiston enters
    host cells from late endosomes. <i>Journal of Virology</i>. 2022;96(5). doi:<a
    href="https://doi.org/10.1128/jvi.02146-21">10.1128/jvi.02146-21</a>
  apa: Windhaber, S., Xin, Q., Uckeley, Z. M., Koch, J., Obr, M., Garnier, C., … Lozach,
    P.-Y. (2022). The Orthobunyavirus Germiston enters host cells from late endosomes.
    <i>Journal of Virology</i>. American Society for Microbiology. <a href="https://doi.org/10.1128/jvi.02146-21">https://doi.org/10.1128/jvi.02146-21</a>
  chicago: Windhaber, Stefan, Qilin Xin, Zina M. Uckeley, Jana Koch, Martin Obr, Céline
    Garnier, Catherine Luengo-Guyonnot, Maëva Duboeuf, Florian KM Schur, and Pierre-Yves
    Lozach. “The Orthobunyavirus Germiston Enters Host Cells from Late Endosomes.”
    <i>Journal of Virology</i>. American Society for Microbiology, 2022. <a href="https://doi.org/10.1128/jvi.02146-21">https://doi.org/10.1128/jvi.02146-21</a>.
  ieee: S. Windhaber <i>et al.</i>, “The Orthobunyavirus Germiston enters host cells
    from late endosomes,” <i>Journal of Virology</i>, vol. 96, no. 5. American Society
    for Microbiology, 2022.
  ista: Windhaber S, Xin Q, Uckeley ZM, Koch J, Obr M, Garnier C, Luengo-Guyonnot
    C, Duboeuf M, Schur FK, Lozach P-Y. 2022. The Orthobunyavirus Germiston enters
    host cells from late endosomes. Journal of Virology. 96(5), e02146-21.
  mla: Windhaber, Stefan, et al. “The Orthobunyavirus Germiston Enters Host Cells
    from Late Endosomes.” <i>Journal of Virology</i>, vol. 96, no. 5, e02146-21, American
    Society for Microbiology, 2022, doi:<a href="https://doi.org/10.1128/jvi.02146-21">10.1128/jvi.02146-21</a>.
  short: S. Windhaber, Q. Xin, Z.M. Uckeley, J. Koch, M. Obr, C. Garnier, C. Luengo-Guyonnot,
    M. Duboeuf, F.K. Schur, P.-Y. Lozach, Journal of Virology 96 (2022).
date_created: 2022-01-18T10:04:18Z
date_published: 2022-03-01T00:00:00Z
date_updated: 2025-04-15T08:24:49Z
day: '01'
department:
- _id: FlSc
doi: 10.1128/jvi.02146-21
external_id:
  isi:
  - '000779305000033'
  pmid:
  - '35019710'
intvolume: '        96'
isi: 1
issue: '5'
keyword:
- virology
- insect science
- immunology
- microbiology
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8906410
month: '03'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 26736D6A-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P31445
  name: Structural conservation and diversity in retroviral capsid
publication: Journal of Virology
publication_identifier:
  eissn:
  - 1098-5514
  issn:
  - 0022-538X
publication_status: published
publisher: American Society for Microbiology
quality_controlled: '1'
scopus_import: '1'
status: public
title: The Orthobunyavirus Germiston enters host cells from late endosomes
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 96
year: '2022'
...
---
_id: '10643'
abstract:
- lang: eng
  text: "We prove a generalised super-adiabatic theorem for extended fermionic systems
    assuming a spectral gap only in the bulk. More precisely, we assume that the infinite
    system has a unique ground state and that the corresponding Gelfand–Naimark–Segal
    Hamiltonian has a spectral gap above its eigenvalue zero. Moreover, we show that
    a similar adiabatic theorem also holds in the bulk of finite systems up to errors
    that vanish faster than any inverse power of the system size, although the corresponding
    finite-volume Hamiltonians need not have a spectral gap.\r\n\r\n"
acknowledgement: J.H. acknowledges partial financial support by the ERC Advanced Grant
  ‘RMTBeyond’ No. 101020331. Support for publication costs from the Deutsche Forschungsgemeinschaft
  and the Open Access Publishing Fund of the University of Tübingen is gratefully
  acknowledged.
article_number: e4
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Sven Joscha
  full_name: Henheik, Sven Joscha
  id: 31d731d7-d235-11ea-ad11-b50331c8d7fb
  last_name: Henheik
  orcid: 0000-0003-1106-327X
- first_name: Stefan
  full_name: Teufel, Stefan
  last_name: Teufel
citation:
  ama: 'Henheik SJ, Teufel S. Adiabatic theorem in the thermodynamic limit: Systems
    with a gap in the bulk. <i>Forum of Mathematics, Sigma</i>. 2022;10. doi:<a href="https://doi.org/10.1017/fms.2021.80">10.1017/fms.2021.80</a>'
  apa: 'Henheik, S. J., &#38; Teufel, S. (2022). Adiabatic theorem in the thermodynamic
    limit: Systems with a gap in the bulk. <i>Forum of Mathematics, Sigma</i>. Cambridge
    University Press. <a href="https://doi.org/10.1017/fms.2021.80">https://doi.org/10.1017/fms.2021.80</a>'
  chicago: 'Henheik, Sven Joscha, and Stefan Teufel. “Adiabatic Theorem in the Thermodynamic
    Limit: Systems with a Gap in the Bulk.” <i>Forum of Mathematics, Sigma</i>. Cambridge
    University Press, 2022. <a href="https://doi.org/10.1017/fms.2021.80">https://doi.org/10.1017/fms.2021.80</a>.'
  ieee: 'S. J. Henheik and S. Teufel, “Adiabatic theorem in the thermodynamic limit:
    Systems with a gap in the bulk,” <i>Forum of Mathematics, Sigma</i>, vol. 10.
    Cambridge University Press, 2022.'
  ista: 'Henheik SJ, Teufel S. 2022. Adiabatic theorem in the thermodynamic limit:
    Systems with a gap in the bulk. Forum of Mathematics, Sigma. 10, e4.'
  mla: 'Henheik, Sven Joscha, and Stefan Teufel. “Adiabatic Theorem in the Thermodynamic
    Limit: Systems with a Gap in the Bulk.” <i>Forum of Mathematics, Sigma</i>, vol.
    10, e4, Cambridge University Press, 2022, doi:<a href="https://doi.org/10.1017/fms.2021.80">10.1017/fms.2021.80</a>.'
  short: S.J. Henheik, S. Teufel, Forum of Mathematics, Sigma 10 (2022).
corr_author: '1'
date_created: 2022-01-18T16:18:51Z
date_published: 2022-01-18T00:00:00Z
date_updated: 2025-04-14T07:57:17Z
day: '18'
ddc:
- '510'
department:
- _id: GradSch
- _id: LaEr
doi: 10.1017/fms.2021.80
ec_funded: 1
external_id:
  arxiv:
  - '2012.15239'
  isi:
  - '000743615000001'
file:
- access_level: open_access
  checksum: 87592a755adcef22ea590a99dc728dd3
  content_type: application/pdf
  creator: cchlebak
  date_created: 2022-01-19T09:27:43Z
  date_updated: 2022-01-19T09:27:43Z
  file_id: '10646'
  file_name: 2022_ForumMathSigma_Henheik.pdf
  file_size: 705323
  relation: main_file
  success: 1
file_date_updated: 2022-01-19T09:27:43Z
has_accepted_license: '1'
intvolume: '        10'
isi: 1
keyword:
- computational mathematics
- discrete mathematics and combinatorics
- geometry and topology
- mathematical physics
- statistics and probability
- algebra and number theory
- theoretical computer science
- analysis
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
project:
- _id: 62796744-2b32-11ec-9570-940b20777f1d
  call_identifier: H2020
  grant_number: '101020331'
  name: Random matrices beyond Wigner-Dyson-Mehta
publication: Forum of Mathematics, Sigma
publication_identifier:
  eissn:
  - 2050-5094
publication_status: published
publisher: Cambridge University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Adiabatic theorem in the thermodynamic limit: Systems with a gap in the bulk'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 10
year: '2022'
...
---
_id: '10652'
abstract:
- lang: eng
  text: Finding a feasible scheme for testing the quantum mechanical nature of the
    gravitational interaction has been attracting an increasing level of attention.
    Gravity mediated entanglement generation so far appears to be the key ingredient
    for a potential experiment. In a recent proposal [D. Carney et al., PRX Quantum
    2, 030330 (2021)] combining an atom interferometer with a low-frequency mechanical
    oscillator, a coherence revival test is proposed for verifying this entanglement
    generation. With measurements performed only on the atoms, this protocol bypasses
    the need for correlation measurements. Here, we explore formulations of such a
    protocol, and specifically find that in the envisioned regime of operation with
    high thermal excitation, semiclassical models, where there is no concept of entanglement,
    also give the same experimental signatures. We elucidate in a fully quantum mechanical
    calculation that entanglement is not the source of the revivals in the relevant
    parameter regime. We argue that, in its current form, the suggested test is only
    relevant if the oscillator is nearly in a pure quantum state, and in this regime
    the effects are too small to be measurable. We further discuss potential open
    ends. The results highlight the importance and subtleties of explicitly considering
    how the quantum case differs from the classical expectations when testing for
    the quantum mechanical nature of a physical system.
acknowledgement: O.H. is supported by Institute of Science and Technology Austria.
  The author thanks Jess Riedel for discussions.
article_number: '013023'
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Onur
  full_name: Hosten, Onur
  id: 4C02D85E-F248-11E8-B48F-1D18A9856A87
  last_name: Hosten
  orcid: 0000-0002-2031-204X
citation:
  ama: Hosten O. Constraints on probing quantum coherence to infer gravitational entanglement.
    <i>Physical Review Research</i>. 2022;4(1). doi:<a href="https://doi.org/10.1103/PhysRevResearch.4.013023">10.1103/PhysRevResearch.4.013023</a>
  apa: Hosten, O. (2022). Constraints on probing quantum coherence to infer gravitational
    entanglement. <i>Physical Review Research</i>. American Physical Society. <a href="https://doi.org/10.1103/PhysRevResearch.4.013023">https://doi.org/10.1103/PhysRevResearch.4.013023</a>
  chicago: Hosten, Onur. “Constraints on Probing Quantum Coherence to Infer Gravitational
    Entanglement.” <i>Physical Review Research</i>. American Physical Society, 2022.
    <a href="https://doi.org/10.1103/PhysRevResearch.4.013023">https://doi.org/10.1103/PhysRevResearch.4.013023</a>.
  ieee: O. Hosten, “Constraints on probing quantum coherence to infer gravitational
    entanglement,” <i>Physical Review Research</i>, vol. 4, no. 1. American Physical
    Society, 2022.
  ista: Hosten O. 2022. Constraints on probing quantum coherence to infer gravitational
    entanglement. Physical Review Research. 4(1), 013023.
  mla: Hosten, Onur. “Constraints on Probing Quantum Coherence to Infer Gravitational
    Entanglement.” <i>Physical Review Research</i>, vol. 4, no. 1, 013023, American
    Physical Society, 2022, doi:<a href="https://doi.org/10.1103/PhysRevResearch.4.013023">10.1103/PhysRevResearch.4.013023</a>.
  short: O. Hosten, Physical Review Research 4 (2022).
corr_author: '1'
date_created: 2022-01-23T23:01:27Z
date_published: 2022-01-10T00:00:00Z
date_updated: 2024-10-09T21:01:26Z
day: '10'
ddc:
- '530'
department:
- _id: OnHo
doi: 10.1103/PhysRevResearch.4.013023
file:
- access_level: open_access
  checksum: 7254d267a0633ca5d63131d345e58686
  content_type: application/pdf
  creator: cchlebak
  date_created: 2022-01-24T11:12:44Z
  date_updated: 2022-01-24T11:12:44Z
  file_id: '10660'
  file_name: 2022_PhysRevResearch_Hosten.pdf
  file_size: 236329
  relation: main_file
  success: 1
file_date_updated: 2022-01-24T11:12:44Z
has_accepted_license: '1'
intvolume: '         4'
issue: '1'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
publication: Physical Review Research
publication_identifier:
  issn:
  - 2643-1564
publication_status: published
publisher: American Physical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Constraints on probing quantum coherence to infer gravitational entanglement
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 4
year: '2022'
...
---
_id: '10653'
abstract:
- lang: eng
  text: Squall lines are known to be the consequence of the interaction of low-level
    shear with cold pools associated with convective downdrafts. Also, as the magnitude
    of the shear increases beyond a critical shear, squall lines tend to orient themselves.
    The existing literature suggests that this orientation reduces incoming wind shear
    to the squall line, and maintains equilibrium between wind shear and cold pool
    spreading. Although this theory is widely accepted, very few quantitative studies
    have been conducted on supercritical regime especially. Here, we test this hypothesis
    with tropical squall lines obtained by imposing a vertical wind shear in cloud
    resolving simulations in radiative convective equilibrium. In the sub-critical
    regime, squall lines are perpendicular to the shear. In the super-critical regime,
    their orientation maintain the equilibrium, supporting existing theories. We also
    find that as shear increases, cold pools become more intense. However, this intensification
    has little impact on squall line orientation.
acknowledgement: The authors gratefully acknowledge funding from the European Research
  Council (ERC) under the European Union's Horizon 2020 research and innovation program
  (Project CLUSTER, Grant Agreement No. 805041), and from the PhD fellowship of Ecole
  Normale Supérieure de Paris-Saclay. Two supplementary movies are also provided showing
  the angle detection method and the squall line of the Usfc = 10 m s−1 simulation.
article_number: e2021GL095184
article_processing_charge: No
article_type: original
author:
- first_name: Sophie
  full_name: Abramian, Sophie
  last_name: Abramian
- first_name: Caroline J
  full_name: Muller, Caroline J
  id: f978ccb0-3f7f-11eb-b193-b0e2bd13182b
  last_name: Muller
  orcid: 0000-0001-5836-5350
- first_name: Camille
  full_name: Risi, Camille
  last_name: Risi
citation:
  ama: Abramian S, Muller CJ, Risi C. Shear-convection interactions and orientation
    of tropical squall lines. <i>Geophysical Research Letters</i>. 2022;49(1). doi:<a
    href="https://doi.org/10.1029/2021GL095184">10.1029/2021GL095184</a>
  apa: Abramian, S., Muller, C. J., &#38; Risi, C. (2022). Shear-convection interactions
    and orientation of tropical squall lines. <i>Geophysical Research Letters</i>.
    Wiley. <a href="https://doi.org/10.1029/2021GL095184">https://doi.org/10.1029/2021GL095184</a>
  chicago: Abramian, Sophie, Caroline J Muller, and Camille Risi. “Shear-Convection
    Interactions and Orientation of Tropical Squall Lines.” <i>Geophysical Research
    Letters</i>. Wiley, 2022. <a href="https://doi.org/10.1029/2021GL095184">https://doi.org/10.1029/2021GL095184</a>.
  ieee: S. Abramian, C. J. Muller, and C. Risi, “Shear-convection interactions and
    orientation of tropical squall lines,” <i>Geophysical Research Letters</i>, vol.
    49, no. 1. Wiley, 2022.
  ista: Abramian S, Muller CJ, Risi C. 2022. Shear-convection interactions and orientation
    of tropical squall lines. Geophysical Research Letters. 49(1), e2021GL095184.
  mla: Abramian, Sophie, et al. “Shear-Convection Interactions and Orientation of
    Tropical Squall Lines.” <i>Geophysical Research Letters</i>, vol. 49, no. 1, e2021GL095184,
    Wiley, 2022, doi:<a href="https://doi.org/10.1029/2021GL095184">10.1029/2021GL095184</a>.
  short: S. Abramian, C.J. Muller, C. Risi, Geophysical Research Letters 49 (2022).
date_created: 2022-01-23T23:01:27Z
date_published: 2022-01-16T00:00:00Z
date_updated: 2025-04-14T07:58:00Z
day: '16'
ddc:
- '550'
department:
- _id: CaMu
doi: 10.1029/2021GL095184
ec_funded: 1
external_id:
  isi:
  - '000743989800040'
  pmid:
  - '35865077'
file:
- access_level: open_access
  checksum: 08f88b57b8e409b42e382452cd5f297b
  content_type: application/pdf
  creator: cchlebak
  date_created: 2022-01-24T12:14:41Z
  date_updated: 2022-01-24T12:14:41Z
  file_id: '10662'
  file_name: 2022_GeophysResearchLet_Abramian.pdf
  file_size: 1117408
  relation: main_file
  success: 1
file_date_updated: 2022-01-24T12:14:41Z
has_accepted_license: '1'
intvolume: '        49'
isi: 1
issue: '1'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 629205d8-2b32-11ec-9570-e1356ff73576
  call_identifier: H2020
  grant_number: '805041'
  name: Organization of CLoUdS, and implications of Tropical  cyclones and for the
    Energetics of the tropics, in current and waRming climate
publication: Geophysical Research Letters
publication_identifier:
  eissn:
  - 1944-8007
  issn:
  - 0094-8276
publication_status: published
publisher: Wiley
quality_controlled: '1'
related_material:
  link:
  - relation: earlier_version
    url: https://doi.org/10.1002/essoar.10507697.1
scopus_import: '1'
status: public
title: Shear-convection interactions and orientation of tropical squall lines
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 49
year: '2022'
...
---
_id: '10654'
abstract:
- lang: eng
  text: "Directed percolation (DP) has recently emerged as a possible solution to
    the century old puzzle surrounding the transition to turbulence. Multiple model
    studies reported DP exponents, however, experimental evidence is limited since
    the largest possible observation times are orders of magnitude shorter than the
    flows’ characteristic timescales. An exception is cylindrical Couette flow where
    the limit is not temporal, but rather the realizable system size. We present experiments
    in a Couette setup of unprecedented azimuthal and axial aspect ratios. Approaching
    the critical point to within less than 0.1% we determine five critical exponents,
    all of which are in excellent agreement with the 2+1D DP universality class. The
    complex dynamics encountered at \r\nthe onset of turbulence can hence be fully
    rationalized within the framework of statistical mechanics."
acknowledged_ssus:
- _id: M-Shop
acknowledgement: "We thank T.Menner, T.Asenov, P. Maier and the Miba machine shop
  of IST Austria for their valuable support in all technical aspects. We thank Marc
  Avila for comments on the manuscript. This work was supported by a grant from the
  Simons Foundation (662960, B.H.). We acknowledge the European Research Council under
  the European Union’s Seventh Framework Programme (FP/2007-2013)/ERC Grant Agreement
  306589 for financial support. K.A.\r\nacknowledges funding from the Central Research
  Development Fund of the University of Bremen, grant number ZF04B /2019/FB04 Avila
  Kerstin (”Independent Project for Postdocs”). L.K. was supported by the European
  Union’s Horizon 2020 Research and innovation programme under the Marie Sklodowska-Curie
  grant agreement  No. 754411.\r\n"
article_number: '014502'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Lukasz
  full_name: Klotz, Lukasz
  id: 2C9AF1C2-F248-11E8-B48F-1D18A9856A87
  last_name: Klotz
  orcid: 0000-0003-1740-7635
- first_name: Grégoire M
  full_name: Lemoult, Grégoire M
  id: 4787FE80-F248-11E8-B48F-1D18A9856A87
  last_name: Lemoult
- first_name: Kerstin
  full_name: Avila, Kerstin
  last_name: Avila
- first_name: Björn
  full_name: Hof, Björn
  id: 3A374330-F248-11E8-B48F-1D18A9856A87
  last_name: Hof
  orcid: 0000-0003-2057-2754
citation:
  ama: Klotz L, Lemoult GM, Avila K, Hof B. Phase transition to turbulence in spatially
    extended shear flows. <i>Physical Review Letters</i>. 2022;128(1). doi:<a href="https://doi.org/10.1103/PhysRevLett.128.014502">10.1103/PhysRevLett.128.014502</a>
  apa: Klotz, L., Lemoult, G. M., Avila, K., &#38; Hof, B. (2022). Phase transition
    to turbulence in spatially extended shear flows. <i>Physical Review Letters</i>.
    American Physical Society. <a href="https://doi.org/10.1103/PhysRevLett.128.014502">https://doi.org/10.1103/PhysRevLett.128.014502</a>
  chicago: Klotz, Lukasz, Grégoire M Lemoult, Kerstin Avila, and Björn Hof. “Phase
    Transition to Turbulence in Spatially Extended Shear Flows.” <i>Physical Review
    Letters</i>. American Physical Society, 2022. <a href="https://doi.org/10.1103/PhysRevLett.128.014502">https://doi.org/10.1103/PhysRevLett.128.014502</a>.
  ieee: L. Klotz, G. M. Lemoult, K. Avila, and B. Hof, “Phase transition to turbulence
    in spatially extended shear flows,” <i>Physical Review Letters</i>, vol. 128,
    no. 1. American Physical Society, 2022.
  ista: Klotz L, Lemoult GM, Avila K, Hof B. 2022. Phase transition to turbulence
    in spatially extended shear flows. Physical Review Letters. 128(1), 014502.
  mla: Klotz, Lukasz, et al. “Phase Transition to Turbulence in Spatially Extended
    Shear Flows.” <i>Physical Review Letters</i>, vol. 128, no. 1, 014502, American
    Physical Society, 2022, doi:<a href="https://doi.org/10.1103/PhysRevLett.128.014502">10.1103/PhysRevLett.128.014502</a>.
  short: L. Klotz, G.M. Lemoult, K. Avila, B. Hof, Physical Review Letters 128 (2022).
corr_author: '1'
date_created: 2022-01-23T23:01:28Z
date_published: 2022-01-05T00:00:00Z
date_updated: 2024-10-22T11:08:41Z
day: '05'
department:
- _id: BjHo
doi: 10.1103/PhysRevLett.128.014502
ec_funded: 1
external_id:
  arxiv:
  - '2111.14894'
  isi:
  - '000748271700010'
  pmid:
  - '35061458'
intvolume: '       128'
isi: 1
issue: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2111.14894
month: '01'
oa: 1
oa_version: Preprint
pmid: 1
project:
- _id: 260C2330-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '754411'
  name: ISTplus - Postdoctoral Fellowships
- _id: 25152F3A-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '306589'
  name: Decoding the complexity of turbulence at its origin
- _id: 238598C6-32DE-11EA-91FC-C7463DDC885E
  grant_number: '662960'
  name: Revisiting the Turbulence Problem Using Statistical Mechanics
publication: Physical Review Letters
publication_identifier:
  eissn:
  - 1079-7114
  issn:
  - 0031-9007
publication_status: published
publisher: American Physical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Phase transition to turbulence in spatially extended shear flows
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 128
year: '2022'
...
