@techreport{5686,
  author       = {Danowski, Patrick},
  pages        = {5},
  title        = {{An Austrian proposal for the Classification of Open Access Tuples (COAT) - Distinguish different Open Access types beyond colors}},
  doi          = {10.5281/zenodo.1244154},
  year         = {2018},
}

@article{437,
  abstract     = {Dendritic cells (DCs) are sentinels of the adaptive immune system that reside in peripheral organs of mammals. Upon pathogen encounter, they undergo maturation and up-regulate the chemokine receptor CCR7 that guides them along gradients of its chemokine ligands CCL19 and 21 to the next draining lymph node. There, DCs present peripherally acquired antigen to naïve T cells, thereby triggering adaptive immunity.},
  author       = {Leithner, Alexander F and Renkawitz, Jörg and De Vries, Ingrid and Hauschild, Robert and Haecker, Hans and Sixt, Michael K},
  journal      = {European Journal of Immunology},
  number       = {6},
  pages        = {1074 -- 1077},
  publisher    = {Wiley-Blackwell},
  title        = {{Fast and efficient genetic engineering of hematopoietic precursor cells for the study of dendritic cell migration}},
  doi          = {10.1002/eji.201747358},
  volume       = {48},
  year         = {2018},
}

@misc{6459,
  author       = {Petritsch, Barbara},
  keywords     = {Open Access, Publication Analysis},
  location     = {Graz, Austria},
  publisher    = {IST Austria},
  title        = {{Open Access at IST Austria 2009-2017}},
  doi          = {10.5281/zenodo.1410279},
  year         = {2018},
}

@misc{5577,
  abstract     = {Data on Austrian open access publication output at Emerald from 2013-2017 including data analysis.},
  author       = {Villányi, Márton},
  keywords     = {Publication analysis, Bibliography, Open Access},
  publisher    = {Institute of Science and Technology Austria},
  title        = {{Emerald Austrian Publications 2013-2017}},
  doi          = {10.15479/AT:ISTA:89},
  year         = {2018},
}

@misc{5578,
  abstract     = {Data on Austrian open access publication output at IOP from 2012-2015 including data analysis.},
  author       = {Villányi, Márton},
  keywords     = {Publication analysis, Bibliography, Open Access},
  publisher    = {Institute of Science and Technology Austria},
  title        = {{IOP Austrian Publications 2012-2015}},
  doi          = {10.15479/AT:ISTA:90},
  year         = {2018},
}

@misc{5574,
  abstract     = {Comparison of Scopus' and publisher's data on Austrian publication output at IOP. },
  author       = {Villányi, Márton},
  keywords     = {Publication analysis, Bibliography, Open Access},
  publisher    = {Institute of Science and Technology Austria},
  title        = {{Data Check IOP Scopus vs. Publisher}},
  doi          = {10.15479/AT:ISTA:86},
  year         = {2018},
}

@misc{5579,
  abstract     = {Data on Austrian open access publication output at RSC from 2013-2017 including data analysis.},
  author       = {Villányi, Márton},
  keywords     = {Publication analysis, Bibliography, Open Access},
  publisher    = {Institute of Science and Technology Austria},
  title        = {{RSC Austrian Publications 2013-2017}},
  doi          = {10.15479/AT:ISTA:91},
  year         = {2018},
}

@phdthesis{278,
  abstract     = {Consortial subscription contracts regulate the digital access to publications between publishers and scientific libraries. However, since a couple of years the tendency towards a freely accessible publishing (Open Access) intensifies. As a consequence of this trend the contractual relationship between licensor and licensee is gradually changing as well: More and more contracts exercise influence on open access publishing. The present study attempts to compare Austrian examples of consortial licence contracts, which include components of open access. It describes the difference between pure subscription contracts and differing innovative deals including open access components. Thereby it becomes obvious that for the evaluation of this licence contracts new methods are needed. An essential new element of such analyses is the evaluation of the open access publication numbers. So this study tries to carry out such publication analyses for Austrian open access deals focusing on quantitative questions: How does the number of publications evolve? How does the open access share change? Publications reports of the publishers and database queries from Scopus form the data basis. The analysis of the data points out that differing approaches of contracts result in highly divergent results: Particular deals can prioritize a saving in costs or else the increase of the open access rate. It is to be assumed that within the following years further numerous open access deals will be negotiated. The finding of this study shall provide guidance.},
  author       = {Villányi, Márton},
  pages        = {94},
  publisher    = {Universität Wien},
  title        = {{Lizenzverträge mit Open-Access-Komponenten an österreichischen Bibliotheken}},
  year         = {2018},
}

@misc{5582,
  abstract     = {Data on Austrian open access publication output at Taylor&Francis from 2013-2017 including data analysis.},
  author       = {Villányi, Márton},
  keywords     = {Publication analysis, Bibliography, Open Access},
  publisher    = {Institute of Science and Technology Austria},
  title        = {{Taylor&Francis Austrian Publications 2013-2017}},
  doi          = {10.15479/AT:ISTA:94},
  year         = {2018},
}

@misc{5581,
  abstract     = {Data on Austrian open access publication output at Springer from 2013-2016 including data analysis.},
  author       = {Villányi, Márton},
  keywords     = {Publication analysis, Bibliography, Open Access},
  publisher    = {Institute of Science and Technology Austria},
  title        = {{Springer Austrian Publications 2013-2016}},
  doi          = {10.15479/AT:ISTA:93},
  year         = {2018},
}

@misc{5580,
  abstract     = {Data on Austrian open access publication output at SAGE from 2013-2017 including data analysis.},
  author       = {Villányi, Márton},
  keywords     = {Publication analysis, Bibliography, Open Access},
  publisher    = {Institute of Science and Technology Austria},
  title        = {{SAGE Austrian Publications 2013-2017}},
  doi          = {10.15479/AT:ISTA:92},
  year         = {2018},
}

@misc{5576,
  abstract     = {Comparison of Scopus' and FWF's data on Austrian publication output at T&F.},
  author       = {Villányi, Márton},
  keywords     = {Publication analysis, Bibliography, Open Access},
  publisher    = {Institute of Science and Technology Austria},
  title        = {{Data Check T&F Scopus vs. FWF}},
  doi          = {10.15479/AT:ISTA:88},
  year         = {2018},
}

@misc{5575,
  abstract     = {Comparison of Scopus' and FWF's data on Austrian publication output at RSC. },
  author       = {Villányi, Márton},
  keywords     = {Publication analysis, Bibliography, Open Access},
  publisher    = {Institute of Science and Technology Austria},
  title        = {{Data Check RSC Scopus vs. FWF}},
  doi          = {10.15479/AT:ISTA:87},
  year         = {2018},
}

@article{15,
  abstract     = {Although much is known about the physiological framework of T cell motility, and numerous rate-limiting molecules have been identified through loss-of-function approaches, an integrated functional concept of T cell motility is lacking. Here, we used in vivo precision morphometry together with analysis of cytoskeletal dynamics in vitro to deconstruct the basic mechanisms of T cell migration within lymphatic organs. We show that the contributions of the integrin LFA-1 and the chemokine receptor CCR7 are complementary rather than positioned in a linear pathway, as they are during leukocyte extravasation from the blood vasculature. Our data demonstrate that CCR7 controls cortical actin flows, whereas integrins mediate substrate friction that is sufficient to drive locomotion in the absence of considerable surface adhesions and plasma membrane flux.},
  author       = {Hons, Miroslav and Kopf, Aglaja and Hauschild, Robert and Leithner, Alexander F and Gärtner, Florian R and Abe, Jun and Renkawitz, Jörg and Stein, Jens and Sixt, Michael K},
  journal      = {Nature Immunology},
  number       = {6},
  pages        = {606 -- 616},
  publisher    = {Nature Publishing Group},
  title        = {{Chemokines and integrins independently tune actin flow and substrate friction during intranodal migration of T cells}},
  doi          = {10.1038/s41590-018-0109-z},
  volume       = {19},
  year         = {2018},
}

@article{442,
  abstract     = {The rapid auxin-triggered growth of the Arabidopsis hypocotyls involves the nuclear TIR1/AFB-Aux/IAA signaling and is accompanied by acidification of the apoplast and cell walls (Fendrych et al., 2016). Here, we describe in detail the method for analysis of the elongation and the TIR1/AFB-Aux/IAA-dependent auxin response in hypocotyl segments as well as the determination of relative values of the cell wall pH.},
  author       = {Li, Lanxin and Krens, Gabriel and Fendrych, Matyas and Friml, Jirí},
  issn         = {2331-8325},
  journal      = {Bio-protocol},
  number       = {1},
  publisher    = {Bio-protocol},
  title        = {{Real-time analysis of auxin response, cell wall pH and elongation in Arabidopsis thaliana Hypocotyls}},
  doi          = {10.21769/BioProtoc.2685},
  volume       = {8},
  year         = {2018},
}

@inproceedings{18286,
  abstract     = {We introduce a new framework for learning dense correspondence between deformable 3D shapes. Existing learning based approaches model shape correspondence as a labelling problem, where each point of a query shape receives a label identifying a point on some reference domain; the correspondence is then constructed a posteriori by composing the label predictions of two input shapes. We propose a paradigm shift and design a structured prediction model in the space of functional maps, linear operators that provide a compact representation of the correspondence. We model the learning process via a deep residual network which takes dense descriptor fields defined on two shapes as input, and outputs a soft map between the two given objects. The resulting correspondence is shown to be accurate on several challenging benchmarks comprising multiple categories, synthetic models, real scans with acquisition artifacts, topological noise, and partiality.},
  author       = {Litany, Or and Remez, Tal and Rodola, Emanuele and Bronstein, Alexander and Bronstein, Michael},
  booktitle    = {2017 IEEE International Conference on Computer Vision (ICCV)},
  issn         = {9781538610329},
  publisher    = {IEEE},
  title        = {{Deep functional maps: Structured prediction for dense shape correspondence}},
  doi          = {10.1109/iccv.2017.603},
  volume       = {31},
  year         = {2017},
}

@inproceedings{12905,
  author       = {Schlögl, Alois and Kiss, Janos},
  booktitle    = {AHPC17 – Austrian HPC Meeting 2017},
  location     = {Grundlsee, Austria},
  pages        = {28},
  publisher    = {FSP Scientific Computing},
  title        = {{Scientific Computing at IST Austria}},
  year         = {2017},
}

@article{1078,
  abstract     = {One of the key questions in understanding plant development is how single cells behave in a larger context of the tissue. Therefore, it requires the observation of the whole organ with a high spatial- as well as temporal resolution over prolonged periods of time, which may cause photo-toxic effects. This protocol shows a plant sample preparation method for light-sheet microscopy, which is characterized by mounting the plant vertically on the surface of a gel. The plant is mounted in such a way that the roots are submerged in a liquid medium while the leaves remain in the air. In order to ensure photosynthetic activity of the plant, a custom-made lighting system illuminates the leaves. To keep the roots in darkness the water surface is covered with sheets of black plastic foil. This method allows long-term imaging of plant organ development in standardized conditions. },
  author       = {Von Wangenheim, Daniel and Hauschild, Robert and Friml, Jirí},
  journal      = {Journal of visualized experiments JoVE},
  number       = {119},
  publisher    = {Journal of Visualized Experiments},
  title        = {{Light sheet fluorescence microscopy of plant roots growing on the surface of a gel}},
  doi          = {10.3791/55044},
  volume       = {2017},
  year         = {2017},
}

@article{1030,
  abstract     = {Auf der Suche nach einem Bibliothekssystem entschied sich die Forschungseinrichtung IST Austria im Jahr 2014 für das Open-Source-Produkt Koha. In einem ersten Schritt wurden zunächst Grundfunktionen aktiviert um im Anschluss diverse zusätzliche Tools zum Einsatz zu bringen. Die große Flexibilität des Systems erlaubt maßgeschneiderte Lösungen für unterschiedlichste Institutionen. Trotz Herausforderungen kann die Bibliothek auf eine erfolgreiche Implementierung zurückblicken.},
  author       = {Villányi, Márton},
  issn         = {2297-3249},
  journal      = {Informationspraxis},
  number       = {1},
  publisher    = {Verein Informationspraxis },
  title        = {{Ein freies Bibliothekssystem für wissenschaftliche Bibliotheken – Werkstattbericht der IST Austria Library}},
  doi          = {10.11588/ip.2017.1.35227},
  volume       = {3},
  year         = {2017},
}

@article{807,
  abstract     = {On January the 1st, 2016 a new agreement between 32 Austrian scientific libraries and the publisher Springer took its effect: this deal covers accessing the licensed content on the one hand, and publishing open access on the other hand. More than 1000 papers by Austrian authors were published open access at Springer in the first year alone. The working group "Springer Compact Evaluierung" made the data for these articles available via the platform OpenAPC and would like to use this opportunity to give a short account of what this publishing agreement actually entails and the working group intends to do.},
  author       = {Andrae, Magdalena and Villányi, Márton},
  issn         = {1022-2588},
  journal      = {Mitteilungen der Vereinigung Österreichischer Bibliothekarinnen und Bibliothekare},
  number       = {2},
  pages        = {274 -- 280},
  publisher    = {VÖB},
  title        = {{Der Springer Compact-Deal – Ein erster Einblick in die Evaluierung einer Offsetting-Vereinbarung}},
  doi          = {10.31263/voebm.v70i2.1898},
  volume       = {70},
  year         = {2017},
}