[{"date_updated":"2026-04-07T11:47:30Z","article_processing_charge":"No","title":"Structures and computations in topological data analysis","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"has_accepted_license":"1","file_date_updated":"2025-02-04T16:22:07Z","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","related_material":{"record":[{"status":"public","relation":"part_of_dissertation","id":"15091"},{"status":"public","relation":"part_of_dissertation","id":"18981"}]},"_id":"18979","ddc":["514","004"],"author":[{"id":"2B23F01E-F248-11E8-B48F-1D18A9856A87","full_name":"Draganov, Ondrej","orcid":"0000-0003-0464-3823","last_name":"Draganov","first_name":"Ondrej"}],"keyword":["topological data analysis","chromatic point set","alpha complex","persistent homology","six pack","sheaf","microlocal discrete Morse","injective resolution","collapse","knot","discrete Morse theory"],"department":[{"_id":"GradSch"},{"_id":"HeEd"}],"alternative_title":["ISTA Thesis"],"supervisor":[{"orcid":"0000-0002-9823-6833","full_name":"Edelsbrunner, Herbert","id":"3FB178DA-F248-11E8-B48F-1D18A9856A87","first_name":"Herbert","last_name":"Edelsbrunner"}],"date_published":"2025-02-03T00:00:00Z","month":"02","doi":"10.15479/at:ista:18979","status":"public","date_created":"2025-01-31T17:04:40Z","fulldoi":"https://doi.org/10.15479/at:ista:18979","oa":1,"oa_version":"Published Version","type":"dissertation","citation":{"ieee":"O. Draganov, “Structures and computations in topological data analysis,” Institute of Science and Technology Austria, 2025.","ista":"Draganov O. 2025. Structures and computations in topological data analysis. Institute of Science and Technology Austria.","apa":"Draganov, O. (2025). <i>Structures and computations in topological data analysis</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/at:ista:18979\">https://doi.org/10.15479/at:ista:18979</a>","ama":"Draganov O. Structures and computations in topological data analysis. 2025. doi:<a href=\"https://doi.org/10.15479/at:ista:18979\">10.15479/at:ista:18979</a>","mla":"Draganov, Ondrej. <i>Structures and Computations in Topological Data Analysis</i>. Institute of Science and Technology Austria, 2025, doi:<a href=\"https://doi.org/10.15479/at:ista:18979\">10.15479/at:ista:18979</a>.","chicago":"Draganov, Ondrej. “Structures and Computations in Topological Data Analysis.” Institute of Science and Technology Austria, 2025. <a href=\"https://doi.org/10.15479/at:ista:18979\">https://doi.org/10.15479/at:ista:18979</a>.","short":"O. Draganov, Structures and Computations in Topological Data Analysis, Institute of Science and Technology Austria, 2025."},"publication_status":"published","acknowledgement":"The research presented in this thesis was funded with the Wittgenstein Prize,\r\nAustrian Science Fund (FWF), grant no. Z 342-N31, and from the DFG Collaborative Research\r\nCenter TRR 109, ‘Discretization in Geometry and Dynamics’, Austrian Science Fund (FWF),\r\ngrant no. I 02979-N35.\r\n","project":[{"call_identifier":"FWF","_id":"2561EBF4-B435-11E9-9278-68D0E5697425","name":"Persistence and stability of geometric complexes","grant_number":"I02979-N35"},{"grant_number":"Z00342","name":"Mathematics, Computer Science","_id":"268116B8-B435-11E9-9278-68D0E5697425","call_identifier":"FWF"}],"degree_awarded":"PhD","abstract":[{"text":"Topological Data Analysis (TDA) is a discipline utilizing the mathematical field of topology to study data, most prominently collections of point sets. This thesis summarizes three projects related to computations in TDA.\r\n\r\nThe first one establishes a variant of TDA for chromatic point sets, where each point is given a color. For example, we are given positions of cells within a tumor microenvironment, and color the cancerous cells red, and the immune cells blue.\r\n\r\nThe aim is then to give a quantitative description of how the two or more sets of points spatially interact. Building on image, kernel and cokernel variants of persistent homology, we suggest six-packs of persistent diagrams as such a descriptor.\r\n\r\nWe describe a construction of a chromatic alpha complex, which enables  efficient computation of several variants of the six-packs. We give topological descriptions of natural subcomplexes of the chromatic alpha complex, and show that the radii of the simplices form a discrete Morse function. Finally, we provide an implementation of the presented chromatic TDA pipeline.\r\n\r\nThe second part aims to translate a powerful tool of sheaf theory to elementary terms using labeled matrices. The goal is to enable their use in computational settings. We show that derived categories of sheaves over finite posets have, up to isomorphism, unique objects---minimal injective resolutions---and give a concrete algorithm to compute them. We further describe simple algorithms to compute derived pushforwards and pullbacks for monotonic maps, and their proper variants for inclusions, and demonstrate their tractability by providing an implementation. Finally, we suggest a discrete definition of microsupport and show desirable properties inspired by discrete Morse theory.\r\n\r\nIn the last part, we present a collection of observations about collapses. We give a characterization of collapsibility in terms of unitriangular submatrices of the boundary matrix, a cotree-tree decomposition, and the optimal solution to a variant of the Procrustes problem. We establish relation between dual collapses and relative Morse theory and pose several open questions. Finally, focusing on complexes embedded in the three-dimensional Euclidean space, we describe a relation between the collapsibility and the triviality of a polygonal knot.","lang":"eng"}],"OA_place":"publisher","language":[{"iso":"eng"}],"publisher":"Institute of Science and Technology Austria","page":"140","publication_identifier":{"issn":["2663-337X"]},"file":[{"file_id":"18983","creator":"odragano","checksum":"af6567e5d35e5eb330b8925ae37f1998","relation":"source_file","date_updated":"2025-01-31T16:58:30Z","date_created":"2025-01-31T16:58:30Z","access_level":"closed","file_size":11899491,"content_type":"application/zip","file_name":"Thesis.zip"},{"file_name":"Thesis.pdf","content_type":"application/pdf","file_size":8857514,"file_id":"19000","creator":"odragano","checksum":"c3fef68e35b9dc2020b2ca6006da6343","access_level":"open_access","date_created":"2025-02-04T16:22:07Z","date_updated":"2025-02-04T16:22:07Z","relation":"main_file"}],"corr_author":"1","year":"2025","day":"03"},{"type":"research_data","oa_version":"Published Version","oa":1,"fulldoi":"https://doi.org/10.15479/AT:ISTA:18991","date_created":"2025-02-04T10:36:18Z","acknowledgement":"Thanks to Rebecca Morse for performing one of the experiments under H.S.C.C. supervision and Jago Wallenschus for technical support, especially with maze design.","citation":{"apa":"Chiossi, H. S. C. (2025). Research data for the publication “Learning reshapes the hippocampal representation hierarchy.” Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT:ISTA:18991\">https://doi.org/10.15479/AT:ISTA:18991</a>","ista":"Chiossi HSC. 2025. Research data for the publication ‘Learning reshapes the hippocampal representation hierarchy’, Institute of Science and Technology Austria, <a href=\"https://doi.org/10.15479/AT:ISTA:18991\">10.15479/AT:ISTA:18991</a>.","ieee":"H. S. C. Chiossi, “Research data for the publication ‘Learning reshapes the hippocampal representation hierarchy.’” Institute of Science and Technology Austria, 2025.","chicago":"Chiossi, Heloisa S. C. “Research Data for the Publication ‘Learning Reshapes the Hippocampal Representation Hierarchy.’” Institute of Science and Technology Austria, 2025. <a href=\"https://doi.org/10.15479/AT:ISTA:18991\">https://doi.org/10.15479/AT:ISTA:18991</a>.","short":"H.S.C. Chiossi, (2025).","mla":"Chiossi, Heloisa S. C. <i>Research Data for the Publication “Learning Reshapes the Hippocampal Representation Hierarchy.”</i> Institute of Science and Technology Austria, 2025, doi:<a href=\"https://doi.org/10.15479/AT:ISTA:18991\">10.15479/AT:ISTA:18991</a>.","ama":"Chiossi HSC. Research data for the publication “Learning reshapes the hippocampal representation hierarchy.” 2025. doi:<a href=\"https://doi.org/10.15479/AT:ISTA:18991\">10.15479/AT:ISTA:18991</a>"},"publisher":"Institute of Science and Technology Austria","contributor":[{"last_name":"Nardin","contributor_type":"researcher","first_name":"Michele","id":"30BD0376-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-8849-6570"},{"last_name":"Tkačik","first_name":"Gašper","contributor_type":"supervisor","id":"3D494DCA-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-6699-1455"},{"first_name":"Jozsef L","contributor_type":"supervisor","last_name":"Csicsvari","orcid":"0000-0002-5193-4036","id":"3FA14672-F248-11E8-B48F-1D18A9856A87"}],"OA_place":"repository","abstract":[{"lang":"eng","text":"Research data for the article \"Learning reshapes the hippocampal representation hierarchy\" from Chiossi et al. (PNAS, 2025). The data includes hippocampal CA1 unit activity and behaviour tracking of 5 Long Evans rats during the learning of an associative memory task. Detailed information can be found in the 'readme.txt' file."}],"acknowledged_ssus":[{"_id":"PreCl"},{"_id":"M-Shop"}],"day":"04","corr_author":"1","license":"https://creativecommons.org/licenses/by-nc-nd/4.0/","year":"2025","file":[{"date_updated":"2025-02-04T10:16:52Z","relation":"main_file","date_created":"2025-02-04T10:16:52Z","access_level":"open_access","checksum":"04d761ed42e8879abffde04a560409ce","file_id":"18992","creator":"hchiossi","success":1,"file_size":769383201,"content_type":"application/zip","file_name":"Chiossi_etal_2025_PNAS_data.zip"},{"file_size":3215,"content_type":"text/plain","file_name":"readme.txt","file_id":"18993","creator":"hchiossi","checksum":"50602931dcd33e4f009ed46af11335f3","success":1,"date_updated":"2025-02-04T10:18:33Z","relation":"main_file","date_created":"2025-02-04T10:18:33Z","access_level":"open_access"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","related_material":{"record":[{"relation":"used_in_publication","id":"19453","status":"public"}]},"file_date_updated":"2025-02-04T10:18:33Z","has_accepted_license":"1","tmp":{"name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","image":"/images/cc_by_nc_nd.png","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","short":"CC BY-NC-ND (4.0)"},"article_processing_charge":"No","title":"Research data for the publication \"Learning reshapes the hippocampal representation hierarchy\"","date_updated":"2026-05-06T13:12:00Z","ddc":["570"],"author":[{"id":"2BBA502C-F248-11E8-B48F-1D18A9856A87","orcid":"0009-0004-2973-278X","full_name":"Chiossi, Heloisa","last_name":"Chiossi","first_name":"Heloisa"}],"OA_type":"gold","_id":"18991","date_published":"2025-02-04T00:00:00Z","department":[{"_id":"GradSch"},{"_id":"JoCs"},{"_id":"GaTk"}],"keyword":["hippocampus","electrophysiology","behavior"],"status":"public","doi":"10.15479/AT:ISTA:18991","month":"02"},{"ec_funded":1,"department":[{"_id":"GradSch"},{"_id":"MiLe"}],"alternative_title":["ISTA Thesis"],"supervisor":[{"first_name":"Mikhail","last_name":"Lemeshko","orcid":"0000-0002-6990-7802","full_name":"Lemeshko, Mikhail","id":"37CB05FA-F248-11E8-B48F-1D18A9856A87"}],"date_published":"2025-02-18T00:00:00Z","month":"02","doi":"10.15479/at:ista:19048","status":"public","date_updated":"2026-04-16T12:20:38Z","title":"Emergent physics of rotating quantum impurities in many-body environments","article_processing_charge":"No","tmp":{"short":"CC BY-NC-SA (4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode","image":"/images/cc_by_nc_sa.png","name":"Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)"},"has_accepted_license":"1","file_date_updated":"2025-02-18T14:25:59Z","related_material":{"record":[{"status":"public","relation":"part_of_dissertation","id":"10845"},{"status":"public","id":"7933","relation":"part_of_dissertation"},{"relation":"part_of_dissertation","id":"18087","status":"public"}]},"user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","_id":"19048","ddc":["539","535","541"],"author":[{"first_name":"Mikhail","last_name":"Maslov","orcid":"0000-0003-4074-2570","full_name":"Maslov, Mikhail","id":"2E65BB0E-F248-11E8-B48F-1D18A9856A87"}],"degree_awarded":"PhD","abstract":[{"lang":"eng","text":"Rotations are found in physics problems at all scales: from spatial motion of celestial bodies, to transitions between quantum states of atoms and molecules. Mathematically, they represent a fundamental class of transformations and symmetries. Unlike spatial displacements, rotational transformations in three-dimensional space  are non-commutative: the result of applying a sequence of rotations depends on the order of these operations. This feature makes the emergent physics that involves rotations rather intricate, but instrumental for studies of highly-interconnected many-body systems. In the presence of an environment, rotational properties of an object change, due to the interaction with particles of the environment. Owing to the complexity of this interaction, it can be engineered to exhibit certain properties of interest. In this Thesis, we examine several scenarios of how the rotational behavior of an impurity can be modified by interactions with its environment."}],"OA_place":"publisher","language":[{"iso":"eng"}],"publisher":"Institute of Science and Technology Austria","page":"86","publication_identifier":{"issn":["2663-337X"]},"file":[{"file_name":"thesis_Maslov.pdf","content_type":"application/pdf","file_size":7779825,"file_id":"19061","creator":"mmaslov","checksum":"5822a4dd31724c512b37c658af1787ab","access_level":"open_access","date_created":"2025-02-18T14:25:59Z","relation":"main_file","date_updated":"2025-02-18T14:25:59Z"},{"access_level":"open_access","date_created":"2025-02-18T14:25:59Z","relation":"source_file","date_updated":"2025-02-18T14:25:59Z","file_id":"19062","checksum":"89bdce4774406d26ceca88a8bbcd6a9a","creator":"mmaslov","file_name":"thesis_Maslov_source.zip","content_type":"application/zip","file_size":14453726}],"license":"https://creativecommons.org/licenses/by-nc-sa/4.0/","corr_author":"1","year":"2025","day":"18","acknowledged_ssus":[{"_id":"CampIT"},{"_id":"E-Lib"},{"_id":"SSU"}],"date_created":"2025-02-18T01:41:27Z","fulldoi":"https://doi.org/10.15479/at:ista:19048","oa":1,"oa_version":"Published Version","type":"dissertation","citation":{"ista":"Maslov M. 2025. Emergent physics of rotating quantum impurities in many-body environments. Institute of Science and Technology Austria.","apa":"Maslov, M. (2025). <i>Emergent physics of rotating quantum impurities in many-body environments</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/at:ista:19048\">https://doi.org/10.15479/at:ista:19048</a>","ieee":"M. Maslov, “Emergent physics of rotating quantum impurities in many-body environments,” Institute of Science and Technology Austria, 2025.","short":"M. Maslov, Emergent Physics of Rotating Quantum Impurities in Many-Body Environments, Institute of Science and Technology Austria, 2025.","chicago":"Maslov, Mikhail. “Emergent Physics of Rotating Quantum Impurities in Many-Body Environments.” Institute of Science and Technology Austria, 2025. <a href=\"https://doi.org/10.15479/at:ista:19048\">https://doi.org/10.15479/at:ista:19048</a>.","ama":"Maslov M. Emergent physics of rotating quantum impurities in many-body environments. 2025. doi:<a href=\"https://doi.org/10.15479/at:ista:19048\">10.15479/at:ista:19048</a>","mla":"Maslov, Mikhail. <i>Emergent Physics of Rotating Quantum Impurities in Many-Body Environments</i>. Institute of Science and Technology Austria, 2025, doi:<a href=\"https://doi.org/10.15479/at:ista:19048\">10.15479/at:ista:19048</a>."},"publication_status":"published","acknowledgement":"I am grateful to the European Research Council (ERC) [10.3030/801770] and Austrian\r\nScience Fund (FWF) [10.55776/F1004] for funding my research and to the Physical\r\nReview journals for publishing it. I also want to thank the VCQ (previously CoQuS) and\r\nIQOQI for organizing wonderful networking events for the physics community in Vienna\r\nand Innsbruck, respectively. Moreover, I thank Austrian Science Fund (FWF) for the\r\ncontinuous support for quantum research.","project":[{"call_identifier":"H2020","name":"Angulon: physics and applications of a new quasiparticle","grant_number":"801770","_id":"2688CF98-B435-11E9-9278-68D0E5697425"},{"_id":"7c040762-9f16-11ee-852c-dd79eeee4ab3","grant_number":"F100403","name":"Coherent Optical Metrology Beyond Electric-Dipole-Allowed Transitions"}]},{"year":"2025","day":"01","file":[{"file_size":35099276,"file_name":"2025_MonthlyNoticesRAS_Claeyssens.pdf","content_type":"application/pdf","checksum":"431aef05755e6b5472f5e9b4c326cf84","creator":"dernst","file_id":"19084","success":1,"date_created":"2025-02-25T06:38:43Z","date_updated":"2025-02-25T06:38:43Z","relation":"main_file","access_level":"open_access"}],"DOAJ_listed":"1","publication_identifier":{"eissn":["1365-2966"],"issn":["0035-8711"]},"language":[{"iso":"eng"}],"page":"2535-2558","publisher":"Oxford University Press","abstract":[{"text":"We present a sample of 1956 individual stellar clumps at redshift 0.7 < z < 10, detected with JWST/NIRCam in 476 galaxies lensed by the galaxy cluster Abell2744. The lensed clumps present magnifications ranging between μ = 1.8 and μ = 300. We perform simultaneous size-photometry estimates in 20 JWST/NIRCam median and broad-band filters from 0.7 to 5 μm.\r\nSpectral energy distribution (SED) fitting analyses enable us to recover the physical properties of the clumps. The majority of the clumps are spatially resolved and have effective radii in the range Reff = 10–700 pc. We restrict this first study to the 1751 post-reionization era clumps with redshift < 5.5. We find a significant evolution of the average clump ages, star formation rates (SFRs), SFR surface densities, and metallicity with increasing redshift, while median stellar mass and stellar mass surface densities are similar in the probed redshift range. We observe a strong correlation between the clump properties and the properties of their host galaxies, with more massive galaxies hosting more massive and older clumps. We find that clumps closer to their host galactic centre are on average more massive, while their ages do not show clear sign of migration. We find that clumps at cosmic noon sample the upper-mass end of the mass function to higher masses than at z > 3, reflecting the rapid increase towards the peak of the cosmic star formation history. We conclude that the results achieved over the studied redshift range are in agreement with expectation of in situ clump formation scenario from large-scale disc fragmentation. ","lang":"eng"}],"OA_place":"publisher","project":[{"grant_number":"101076224","name":"Young galaxies as tracers and agents of cosmic reionization","_id":"bd9b2118-d553-11ed-ba76-db24564edfea"}],"acknowledgement":"The authors thank the International Space Science Institute for sponsoring the ISSI team: ‘Star Formation within rapidly evolving galaxies’ where many ideas discussed in this article have been brainstormed. AA and AC acknowledge support by the Swedish research council Vetenskapsrådet (2021-05559). MM acknowledges the financial support through grant PRIN-MIUR 2020SKSTHZ. JM and IK acknowledge support by the European Union (ERC, AGENTS, 101076224). Views and opinions expressed are however those of the author(s) only and do not necessarily reflect those of the European Union or the European Research Council. Neither the European Union nor the granting authority can be held responsible for them. RPN acknowledges funding from JWST programme GO-3516. Support for this work was provided by NASA through the NASA Hubble Fellowship grant HST-HF2-51515.001-A awarded by the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Incorporated, under NASA contract NAS5-26555.","citation":{"ista":"Claeyssens A, Adamo A, Messa M, Dessauges-Zavadsky M, Richard J, Kramarenko I, Matthee JJ, Naidu RP. 2025. Tracing star formation across cosmic time at tens of parsec-scales in the lensing cluster field Abell 2744. Monthly Notices of the Royal Astronomical Society. 537(3), 2535–2558.","apa":"Claeyssens, A., Adamo, A., Messa, M., Dessauges-Zavadsky, M., Richard, J., Kramarenko, I., … Naidu, R. P. (2025). Tracing star formation across cosmic time at tens of parsec-scales in the lensing cluster field Abell 2744. <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/mnras/staf058\">https://doi.org/10.1093/mnras/staf058</a>","ieee":"A. Claeyssens <i>et al.</i>, “Tracing star formation across cosmic time at tens of parsec-scales in the lensing cluster field Abell 2744,” <i>Monthly Notices of the Royal Astronomical Society</i>, vol. 537, no. 3. Oxford University Press, pp. 2535–2558, 2025.","chicago":"Claeyssens, Adélaïde, Angela Adamo, Matteo Messa, Miroslava Dessauges-Zavadsky, Johan Richard, Ivan Kramarenko, Jorryt J Matthee, and Rohan P. Naidu. “Tracing Star Formation across Cosmic Time at Tens of Parsec-Scales in the Lensing Cluster Field Abell 2744.” <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford University Press, 2025. <a href=\"https://doi.org/10.1093/mnras/staf058\">https://doi.org/10.1093/mnras/staf058</a>.","short":"A. Claeyssens, A. Adamo, M. Messa, M. Dessauges-Zavadsky, J. Richard, I. Kramarenko, J.J. Matthee, R.P. Naidu, Monthly Notices of the Royal Astronomical Society 537 (2025) 2535–2558.","mla":"Claeyssens, Adélaïde, et al. “Tracing Star Formation across Cosmic Time at Tens of Parsec-Scales in the Lensing Cluster Field Abell 2744.” <i>Monthly Notices of the Royal Astronomical Society</i>, vol. 537, no. 3, Oxford University Press, 2025, pp. 2535–58, doi:<a href=\"https://doi.org/10.1093/mnras/staf058\">10.1093/mnras/staf058</a>.","ama":"Claeyssens A, Adamo A, Messa M, et al. Tracing star formation across cosmic time at tens of parsec-scales in the lensing cluster field Abell 2744. <i>Monthly Notices of the Royal Astronomical Society</i>. 2025;537(3):2535-2558. doi:<a href=\"https://doi.org/10.1093/mnras/staf058\">10.1093/mnras/staf058</a>"},"publication_status":"published","oa_version":"Published Version","arxiv":1,"type":"journal_article","intvolume":"       537","fulldoi":"https://doi.org/10.1093/mnras/staf058","oa":1,"issue":"3","date_created":"2025-02-23T23:01:55Z","doi":"10.1093/mnras/staf058","status":"public","quality_controlled":"1","month":"03","publication":"Monthly Notices of the Royal Astronomical Society","date_published":"2025-03-01T00:00:00Z","article_type":"original","department":[{"_id":"JoMa"},{"_id":"GradSch"}],"ddc":["520"],"author":[{"last_name":"Claeyssens","first_name":"Adélaïde","full_name":"Claeyssens, Adélaïde"},{"full_name":"Adamo, Angela","first_name":"Angela","last_name":"Adamo"},{"full_name":"Messa, Matteo","last_name":"Messa","first_name":"Matteo"},{"full_name":"Dessauges-Zavadsky, Miroslava","first_name":"Miroslava","last_name":"Dessauges-Zavadsky"},{"full_name":"Richard, Johan","last_name":"Richard","first_name":"Johan"},{"last_name":"Kramarenko","first_name":"Ivan","id":"9a9394cb-3200-11ee-973b-f5ba2a8b16e4","full_name":"Kramarenko, Ivan","orcid":"0000-0001-5346-6048"},{"id":"7439a258-f3c0-11ec-9501-9df22fe06720","orcid":"0000-0003-2871-127X","full_name":"Matthee, Jorryt J","last_name":"Matthee","first_name":"Jorryt J"},{"last_name":"Naidu","first_name":"Rohan P.","full_name":"Naidu, Rohan P."}],"isi":1,"OA_type":"gold","scopus_import":"1","_id":"19066","volume":537,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","file_date_updated":"2025-02-25T06:38:43Z","external_id":{"isi":["001420026000001"],"arxiv":["2410.10974"]},"tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"has_accepted_license":"1","date_updated":"2026-02-16T11:51:48Z","title":"Tracing star formation across cosmic time at tens of parsec-scales in the lensing cluster field Abell 2744","article_processing_charge":"No"},{"date_published":"2025-02-07T00:00:00Z","article_type":"original","department":[{"_id":"CaGo"},{"_id":"GradSch"}],"month":"02","publication":"Physical Review Letters","status":"public","doi":"10.1103/PhysRevLett.134.058204","quality_controlled":"1","title":"Accessing semiaddressable self-assembly with efficient structure enumeration","article_processing_charge":"No","date_updated":"2025-09-30T10:35:47Z","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","related_material":{"link":[{"relation":"software","url":"https://github.com/mxhbl/Roly.jl"}]},"external_id":{"isi":["001454696800003"],"arxiv":["2405.13567"],"pmid":["39983190"]},"OA_type":"green","volume":134,"scopus_import":"1","_id":"19067","author":[{"first_name":"Maximilian","last_name":"Hübl","full_name":"Hübl, Maximilian","id":"5eb8629e-15b2-11ec-abd3-e6f3e5e01f32"},{"last_name":"Goodrich","first_name":"Carl Peter","id":"EB352CD2-F68A-11E9-89C5-A432E6697425","orcid":"0000-0002-1307-5074","full_name":"Goodrich, Carl Peter"}],"isi":1,"OA_place":"repository","abstract":[{"text":"Modern experimental methods enable the creation of self-assembly building blocks with tunable interactions, but optimally exploiting this tunability for the self-assembly of desired structures remains an important challenge. Many studies of this inverse problem start with the so-called fully addressable limit, where every particle in a target structure is different. This leads to clear design principles that often result in high assembly yield, but it is not a scalable approach—at some point, one must grapple with “reusing” building blocks, which lowers the degree of addressability and may cause a multitude of off-target structures to form, complicating the design process. Here, we solve a key obstacle preventing robust inverse design in the “semiaddressable regime” by developing a highly efficient algorithm that enumerates all structures that can be formed from a given set of building blocks. By combining this with established partition-function-based yield calculations, we show that it is almost always possible to find economical semiaddressable designs where the entropic gain from reusing building blocks outweighs the presence of off-target structures and even increases the yield of the target. Thus, not only does our enumeration algorithm enable robust and scalable inverse design in the semiaddressable regime, our results demonstrate that it is possible to operate in this regime while maintaining the level of control often associated with full addressability.","lang":"eng"}],"article_number":"058204","publisher":"American Physical Society","language":[{"iso":"eng"}],"publication_identifier":{"eissn":["1079-7114"],"issn":["0031-9007"]},"day":"07","year":"2025","corr_author":"1","issue":"5","date_created":"2025-02-23T23:01:55Z","type":"journal_article","arxiv":1,"oa_version":"Preprint","oa":1,"fulldoi":"https://doi.org/10.1103/PhysRevLett.134.058204","intvolume":"       134","acknowledgement":"We thank Daichi Hayakawa, Thomas E. Videbæk, and W. Benjamin Rogers for important discussions and Jérémie Palacci, Anđela Šarić, and Scott Waitukaitis for helpful comments on the manuscript. The research was supported by the Gesellschaft für Forschungsförderung Niederösterreich under Project No. FTI23-G-011.","publication_status":"published","pmid":1,"citation":{"mla":"Hübl, Maximilian, and Carl Peter Goodrich. “Accessing Semiaddressable Self-Assembly with Efficient Structure Enumeration.” <i>Physical Review Letters</i>, vol. 134, no. 5, 058204, American Physical Society, 2025, doi:<a href=\"https://doi.org/10.1103/PhysRevLett.134.058204\">10.1103/PhysRevLett.134.058204</a>.","ama":"Hübl M, Goodrich CP. Accessing semiaddressable self-assembly with efficient structure enumeration. <i>Physical Review Letters</i>. 2025;134(5). doi:<a href=\"https://doi.org/10.1103/PhysRevLett.134.058204\">10.1103/PhysRevLett.134.058204</a>","chicago":"Hübl, Maximilian, and Carl Peter Goodrich. “Accessing Semiaddressable Self-Assembly with Efficient Structure Enumeration.” <i>Physical Review Letters</i>. American Physical Society, 2025. <a href=\"https://doi.org/10.1103/PhysRevLett.134.058204\">https://doi.org/10.1103/PhysRevLett.134.058204</a>.","short":"M. Hübl, C.P. Goodrich, Physical Review Letters 134 (2025).","ista":"Hübl M, Goodrich CP. 2025. Accessing semiaddressable self-assembly with efficient structure enumeration. Physical Review Letters. 134(5), 058204.","apa":"Hübl, M., &#38; Goodrich, C. P. (2025). Accessing semiaddressable self-assembly with efficient structure enumeration. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevLett.134.058204\">https://doi.org/10.1103/PhysRevLett.134.058204</a>","ieee":"M. Hübl and C. P. Goodrich, “Accessing semiaddressable self-assembly with efficient structure enumeration,” <i>Physical Review Letters</i>, vol. 134, no. 5. American Physical Society, 2025."},"project":[{"_id":"8dd93da8-16d5-11f0-9cad-d2c70200d9a5","grant_number":"FTI23-G-011","name":"Dynamically reconfigurable self-assembly with triangular DNA-origami bricks"}],"main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2405.13567"}]},{"month":"03","status":"public","doi":"10.15479/AT:ISTA:19409","department":[{"_id":"GradSch"},{"_id":"GeKa"}],"date_published":"2025-03-17T00:00:00Z","_id":"19409","OA_type":"gold","author":[{"last_name":"Saez Mollejo","first_name":"Jaime","id":"e0390f72-f6e0-11ea-865d-862393336714","full_name":"Saez Mollejo, Jaime"}],"ddc":["530"],"article_processing_charge":"No","title":"Exchange anisotropies in microwave-driven singlet-triplet qubits","date_updated":"2026-05-20T06:42:16Z","has_accepted_license":"1","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"file_date_updated":"2025-03-17T08:48:09Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","related_material":{"record":[{"status":"public","id":"19424","relation":"used_in_publication"}]},"file":[{"success":1,"checksum":"1f21c8ea2196776aae51cc3a5d00e00b","file_id":"19410","creator":"jsaezmol","access_level":"open_access","date_created":"2025-03-17T08:48:09Z","relation":"main_file","date_updated":"2025-03-17T08:48:09Z","file_name":"AllDataPublished.zip","content_type":"application/x-zip-compressed","file_size":21971911}],"day":"17","acknowledged_ssus":[{"_id":"NanoFab"},{"_id":"M-Shop"}],"corr_author":"1","year":"2025","OA_place":"publisher","abstract":[{"lang":"eng","text":"This .zip file contains the data to reproduce the figures and supplementary figures of \"Exchange anisotropies in microwave-driven singlet-triplet qubits\" by Jaime Saez-Mollejo et al.\r\n"}],"publisher":"Institute of Science and Technology Austria","contributor":[{"first_name":"Daniel","last_name":"Jirovec","orcid":"0000-0002-7197-4801","id":"4C473F58-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Yona A","last_name":"Schell","id":"fe39122d-06bb-11ec-a33b-9e22b40e40a5"},{"first_name":"Josip","last_name":"Kukucka","id":"3F5D8856-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Calcaterra","first_name":"Stefano"},{"last_name":"Chrastina","first_name":"Daniel "},{"first_name":"Giovanni ","last_name":"Isella"},{"last_name":"Rimbach-Russ","first_name":"Maximilian"},{"last_name":"Bosco","first_name":"Stefano"},{"id":"38DB5788-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-8342-202X","last_name":"Katsaros","first_name":"Georgios"}],"citation":{"apa":"Saez Mollejo, J. (2025). Exchange anisotropies in microwave-driven singlet-triplet qubits. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT:ISTA:19409\">https://doi.org/10.15479/AT:ISTA:19409</a>","ista":"Saez Mollejo J. 2025. Exchange anisotropies in microwave-driven singlet-triplet qubits, Institute of Science and Technology Austria, <a href=\"https://doi.org/10.15479/AT:ISTA:19409\">10.15479/AT:ISTA:19409</a>.","ieee":"J. Saez Mollejo, “Exchange anisotropies in microwave-driven singlet-triplet qubits.” Institute of Science and Technology Austria, 2025.","chicago":"Saez Mollejo, Jaime. “Exchange Anisotropies in Microwave-Driven Singlet-Triplet Qubits.” Institute of Science and Technology Austria, 2025. <a href=\"https://doi.org/10.15479/AT:ISTA:19409\">https://doi.org/10.15479/AT:ISTA:19409</a>.","short":"J. Saez Mollejo, (2025).","mla":"Saez Mollejo, Jaime. <i>Exchange Anisotropies in Microwave-Driven Singlet-Triplet Qubits</i>. Institute of Science and Technology Austria, 2025, doi:<a href=\"https://doi.org/10.15479/AT:ISTA:19409\">10.15479/AT:ISTA:19409</a>.","ama":"Saez Mollejo J. Exchange anisotropies in microwave-driven singlet-triplet qubits. 2025. doi:<a href=\"https://doi.org/10.15479/AT:ISTA:19409\">10.15479/AT:ISTA:19409</a>"},"acknowledgement":"We thank A. Crippa for helpful discussions. This research was supported by the Scientific Service Units of ISTA through resources provided by the MIBA Machine Shop and the Nanofabrication facility. This research and related results were made possible with the support of the NOMIS Foundation, the HORIZON-RIA 101069515 project and the FWF Projects \r\nwith DOI:10.55776/F86 and DOI:10.55776/I5060. M.R.-R. acknowledges support from the Netherlands Organization of\r\n scientific Research (NWO) under Veni grant VI.Veni.212.223. The Research of S.B. and M.R.-R. was sponsored in part by the Army Research Office and was accomplished under Award Number: W911NF-23-1-0110.","project":[{"grant_number":"101069515","name":"Integrated Germanium Quantum Technology","_id":"34c0acea-11ca-11ed-8bc3-8775e10fd452"},{"_id":"c0977eea-5a5b-11eb-8a69-a862db0cf4d1","name":"High impedance circuit quantum electrodynamics with hole spins","grant_number":"I05060"},{"_id":"34a66131-11ca-11ed-8bc3-a31681c6b03e","name":"Center for Correlated Quantum Materials and Solid State Quantum Systems: Conventional  and unconventional topological superconductors","grant_number":"F8606"}],"date_created":"2025-03-17T08:57:09Z","oa":1,"fulldoi":"https://doi.org/10.15479/AT:ISTA:19409","type":"research_data","oa_version":"Published Version"},{"external_id":{"isi":["001459830100002"]},"file_date_updated":"2025-04-10T06:12:49Z","related_material":{"link":[{"relation":"software","url":"https://git.ista.ac.at/mmaslov/dirac_pauli_LHP"}]},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"Yes","title":"Massive Dirac-Pauli physics in lead-halide perovskites","date_updated":"2026-05-06T13:06:08Z","has_accepted_license":"1","tmp":{"name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","image":"/images/cc_by_nc_nd.png","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","short":"CC BY-NC-ND (4.0)"},"isi":1,"ddc":["530"],"author":[{"id":"5e9a6931-eb97-11eb-a6c2-e96f7058d77a","full_name":"Shiva Kumar, Abhishek","last_name":"Shiva Kumar","first_name":"Abhishek"},{"last_name":"Maslov","first_name":"Mikhail","id":"2E65BB0E-F248-11E8-B48F-1D18A9856A87","full_name":"Maslov, Mikhail","orcid":"0000-0003-4074-2570"},{"first_name":"Mikhail","last_name":"Lemeshko","orcid":"0000-0002-6990-7802","full_name":"Lemeshko, Mikhail","id":"37CB05FA-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Volosniev","first_name":"Artem","id":"37D278BC-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-0393-5525","full_name":"Volosniev, Artem"},{"last_name":"Alpichshev","first_name":"Zhanybek","id":"45E67A2A-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-7183-5203","full_name":"Alpichshev, Zhanybek"}],"volume":10,"scopus_import":"1","_id":"19531","OA_type":"gold","department":[{"_id":"GradSch"},{"_id":"ZhAl"},{"_id":"MiLe"}],"article_type":"original","date_published":"2025-04-04T00:00:00Z","quality_controlled":"1","status":"public","doi":"10.1038/s41535-025-00754-7","publication":"npj Quantum Materials","month":"04","oa":1,"fulldoi":"https://doi.org/10.1038/s41535-025-00754-7","intvolume":"        10","type":"journal_article","oa_version":"Published Version","date_created":"2025-04-08T18:13:06Z","project":[{"_id":"B67AFEDC-15C9-11EA-A837-991A96BB2854","name":"IST Austria Open Access Fund"}],"publication_status":"published","citation":{"apa":"Shiva Kumar, A., Maslov, M., Lemeshko, M., Volosniev, A., &#38; Alpichshev, Z. (2025). Massive Dirac-Pauli physics in lead-halide perovskites. <i>Npj Quantum Materials</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41535-025-00754-7\">https://doi.org/10.1038/s41535-025-00754-7</a>","ista":"Shiva Kumar A, Maslov M, Lemeshko M, Volosniev A, Alpichshev Z. 2025. Massive Dirac-Pauli physics in lead-halide perovskites. npj Quantum Materials. 10, 37.","ieee":"A. Shiva Kumar, M. Maslov, M. Lemeshko, A. Volosniev, and Z. Alpichshev, “Massive Dirac-Pauli physics in lead-halide perovskites,” <i>npj Quantum Materials</i>, vol. 10. Springer Nature, 2025.","chicago":"Shiva Kumar, Abhishek, Mikhail Maslov, Mikhail Lemeshko, Artem Volosniev, and Zhanybek Alpichshev. “Massive Dirac-Pauli Physics in Lead-Halide Perovskites.” <i>Npj Quantum Materials</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1038/s41535-025-00754-7\">https://doi.org/10.1038/s41535-025-00754-7</a>.","short":"A. Shiva Kumar, M. Maslov, M. Lemeshko, A. Volosniev, Z. Alpichshev, Npj Quantum Materials 10 (2025).","ama":"Shiva Kumar A, Maslov M, Lemeshko M, Volosniev A, Alpichshev Z. Massive Dirac-Pauli physics in lead-halide perovskites. <i>npj Quantum Materials</i>. 2025;10. doi:<a href=\"https://doi.org/10.1038/s41535-025-00754-7\">10.1038/s41535-025-00754-7</a>","mla":"Shiva Kumar, Abhishek, et al. “Massive Dirac-Pauli Physics in Lead-Halide Perovskites.” <i>Npj Quantum Materials</i>, vol. 10, 37, Springer Nature, 2025, doi:<a href=\"https://doi.org/10.1038/s41535-025-00754-7\">10.1038/s41535-025-00754-7</a>."},"publisher":"Springer Nature","language":[{"iso":"eng"}],"APC_amount":"3054 EUR","OA_place":"publisher","abstract":[{"text":"In standard quantum electrodynamics (QED), the so-called non-minimal (Pauli) coupling is suppressed for elementary particles and has no physical implications. Here, we show that the Pauli term naturally appears in a known family of Dirac materials—the lead-halide perovskites, suggesting a novel playground for the study of analog QED effects. We outline measurable manifestations of the Pauli term in the phenomena pertaining to (i) relativistic corrections to bound states (ii) the Klein paradox, and (iii) spin effects in scattering. In particular, we demonstrate that (a) the binding energy of an electron in the vicinity of a positively charged defect is noticeably decreased due to the polarizability of lead ions and the appearance of a Darwin-like term, (b) strong spin-orbit coupling due to the Pauli term affects the exciton states, and (c) scattering of an electron off an energy barrier with broken mirror symmetry produces spin polarization in the outgoing current. Our study adds to the understanding of quantum phenomena in lead-halide perovskites and paves the way for tabletop simulations of analog Dirac-Pauli equations.","lang":"eng"}],"article_number":"37","file":[{"file_id":"19536","checksum":"08b1a94b362bb65482887e50020810e5","creator":"dernst","success":1,"date_updated":"2025-04-10T06:12:49Z","relation":"main_file","date_created":"2025-04-10T06:12:49Z","access_level":"open_access","file_size":592092,"content_type":"application/pdf","file_name":"2025_njpQuantumMaterials_Kumar.pdf"}],"DOAJ_listed":"1","day":"04","corr_author":"1","year":"2025","publication_identifier":{"eissn":["2397-4648"]}},{"status":"public","doi":"10.15479/AT-ISTA-19557","month":"04","date_published":"2025-04-14T00:00:00Z","alternative_title":["ISTA Thesis"],"supervisor":[{"first_name":"Gaia","last_name":"Novarino","orcid":"0000-0002-7673-7178","full_name":"Novarino, Gaia","id":"3E57A680-F248-11E8-B48F-1D18A9856A87"}],"department":[{"_id":"GradSch"},{"_id":"GaNo"}],"author":[{"full_name":"Schwarz, Lena A","id":"29A8453C-F248-11E8-B48F-1D18A9856A87","first_name":"Lena A","last_name":"Schwarz"}],"ddc":["570"],"_id":"19557","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","related_material":{"record":[{"relation":"part_of_dissertation","id":"12802","status":"public"},{"id":"9429","relation":"part_of_dissertation","status":"public"}]},"file_date_updated":"2026-03-27T13:15:08Z","has_accepted_license":"1","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"article_processing_charge":"No","title":"Mapping developmental dynamics of autism spectrum disorder mouse models at single-cell resolution","date_updated":"2026-04-14T09:07:14Z","day":"14","acknowledged_ssus":[{"_id":"Bio"},{"_id":"PreCl"},{"_id":"ScienComp"}],"corr_author":"1","year":"2025","file":[{"file_size":21783427,"content_type":"application/vnd.openxmlformats-officedocument.wordprocessingml.document","file_name":"Schwarz_Thesis_2025_FINAL.docx","date_updated":"2025-04-15T08:43:36Z","relation":"source_file","date_created":"2025-04-15T08:43:36Z","access_level":"closed","file_id":"19561","creator":"lschwarz","checksum":"50290a8604edb0a720387f01e9d59fe4"},{"relation":"main_file","date_updated":"2026-03-27T13:15:08Z","date_created":"2025-04-15T08:43:42Z","access_level":"closed","embargo_to":"open_access","file_id":"19562","checksum":"ed028488180ac4901e018ef1c330cf01","creator":"lschwarz","file_size":11432175,"content_type":"application/pdf","embargo":"2026-10-15","file_name":"Schwarz_Thesis_2025_FINALpdfa.pdf"}],"publication_identifier":{"issn":["2663-337X"]},"page":"124","publisher":"Institute of Science and Technology Austria","language":[{"iso":"eng"}],"OA_place":"publisher","degree_awarded":"PhD","project":[{"_id":"9B91375C-BA93-11EA-9121-9846C619BF3A","name":"Critical windows and reversibility of ASD associated with mutations in chromatin remodelers","grant_number":"707964"},{"_id":"34ba8964-11ca-11ed-8bc3-e15864e7e9a6","grant_number":"101044865","name":"Toward an understanding of the brain interstitial system and the extracellular proteome in health and autism spectrum disorders"},{"_id":"2548AE96-B435-11E9-9278-68D0E5697425","grant_number":"W1232","name":"Molecular Drug Targets","call_identifier":"FWF"}],"acknowledgement":"The work presented in this doctoral thesis was performed at the Institute of Science\r\nand Technology (ISTA) and financially supported by a European Research Council\r\n(ERC) Consolidator Grant (PR1028ERC02), by SFARI (PR1028SIM02) and by the\r\nAustrian Science Fund (FWF) to Gaia Novarino (PE1028W1232). I am very thankful\r\nto the Doctoral Program “Molecular Drug Targets” (MolTag) for offering me financial\r\nsupport to perform essential experiments during my PhD studies and to participate in\r\ninternational conferences and courses.","publication_status":"published","citation":{"mla":"Schwarz, Lena A. <i>Mapping Developmental Dynamics of Autism Spectrum Disorder Mouse Models at Single-Cell Resolution</i>. Institute of Science and Technology Austria, 2025, doi:<a href=\"https://doi.org/10.15479/AT-ISTA-19557\">10.15479/AT-ISTA-19557</a>.","ama":"Schwarz LA. Mapping developmental dynamics of autism spectrum disorder mouse models at single-cell resolution. 2025. doi:<a href=\"https://doi.org/10.15479/AT-ISTA-19557\">10.15479/AT-ISTA-19557</a>","short":"L.A. Schwarz, Mapping Developmental Dynamics of Autism Spectrum Disorder Mouse Models at Single-Cell Resolution, Institute of Science and Technology Austria, 2025.","chicago":"Schwarz, Lena A. “Mapping Developmental Dynamics of Autism Spectrum Disorder Mouse Models at Single-Cell Resolution.” Institute of Science and Technology Austria, 2025. <a href=\"https://doi.org/10.15479/AT-ISTA-19557\">https://doi.org/10.15479/AT-ISTA-19557</a>.","ieee":"L. A. Schwarz, “Mapping developmental dynamics of autism spectrum disorder mouse models at single-cell resolution,” Institute of Science and Technology Austria, 2025.","ista":"Schwarz LA. 2025. Mapping developmental dynamics of autism spectrum disorder mouse models at single-cell resolution. Institute of Science and Technology Austria.","apa":"Schwarz, L. A. (2025). <i>Mapping developmental dynamics of autism spectrum disorder mouse models at single-cell resolution</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT-ISTA-19557\">https://doi.org/10.15479/AT-ISTA-19557</a>"},"type":"dissertation","oa_version":"Published Version","fulldoi":"https://doi.org/10.15479/AT-ISTA-19557","date_created":"2025-04-14T06:59:06Z"},{"language":[{"iso":"eng"}],"publisher":"American Physical Society","abstract":[{"text":"In this article, we propose a method for generating single microwave photons in superconducting circuits. We theoretically show that pure single microwave photons can be generated on demand and tuned over a large frequency band by making use of Landau-Zener transitions under a rapid sweep of a control parameter. We devise a protocol that enables fast control of the frequency of the emitted photon over two octaves, without requiring extensive calibration. Additionally, we make theoretical estimates of the generation efficiency, tunability, purity, and linewidth of the photons emitted using this method for both charge- and flux-qubit-based architectures. We also provide estimates of the optimal device parameters required for these architectures to realize the device.","lang":"eng"}],"article_number":"044042","OA_place":"publisher","file":[{"file_size":837219,"content_type":"application/pdf","file_name":"PhysRevApplied.23.044042.pdf","file_id":"19620","checksum":"582b2ed6afb654300cabf0e3add14ca8","creator":"shawalda","success":1,"relation":"main_file","date_updated":"2025-04-24T06:40:22Z","date_created":"2025-04-24T06:40:22Z","access_level":"open_access"}],"year":"2025","corr_author":"1","day":"18","publication_identifier":{"issn":["2331-7019"]},"fulldoi":"https://doi.org/10.1103/physrevapplied.23.044042","intvolume":"        23","oa":1,"oa_version":"Published Version","type":"journal_article","issue":"4","date_created":"2025-04-24T06:34:07Z","citation":{"ieee":"S. Hawaldar, S. S. Khaire, P. Delsing, and B. Suri, “On-demand single-microwave-photon source in a superconducting circuit with wideband frequency tunability,” <i>Physical Review Applied</i>, vol. 23, no. 4. American Physical Society, 2025.","apa":"Hawaldar, S., Khaire, S. S., Delsing, P., &#38; Suri, B. (2025). On-demand single-microwave-photon source in a superconducting circuit with wideband frequency tunability. <i>Physical Review Applied</i>. American Physical Society. <a href=\"https://doi.org/10.1103/physrevapplied.23.044042\">https://doi.org/10.1103/physrevapplied.23.044042</a>","ista":"Hawaldar S, Khaire SS, Delsing P, Suri B. 2025. On-demand single-microwave-photon source in a superconducting circuit with wideband frequency tunability. Physical Review Applied. 23(4), 044042.","mla":"Hawaldar, Samarth, et al. “On-Demand Single-Microwave-Photon Source in a Superconducting Circuit with Wideband Frequency Tunability.” <i>Physical Review Applied</i>, vol. 23, no. 4, 044042, American Physical Society, 2025, doi:<a href=\"https://doi.org/10.1103/physrevapplied.23.044042\">10.1103/physrevapplied.23.044042</a>.","ama":"Hawaldar S, Khaire SS, Delsing P, Suri B. On-demand single-microwave-photon source in a superconducting circuit with wideband frequency tunability. <i>Physical Review Applied</i>. 2025;23(4). doi:<a href=\"https://doi.org/10.1103/physrevapplied.23.044042\">10.1103/physrevapplied.23.044042</a>","chicago":"Hawaldar, Samarth, Siddhi Satish Khaire, Per Delsing, and Baladitya Suri. “On-Demand Single-Microwave-Photon Source in a Superconducting Circuit with Wideband Frequency Tunability.” <i>Physical Review Applied</i>. American Physical Society, 2025. <a href=\"https://doi.org/10.1103/physrevapplied.23.044042\">https://doi.org/10.1103/physrevapplied.23.044042</a>.","short":"S. Hawaldar, S.S. Khaire, P. Delsing, B. Suri, Physical Review Applied 23 (2025)."},"publication_status":"published","acknowledgement":"The authors acknowledge the support of DST-INSPIRE Fellowship No. IF180339 and DST-SERB Core Research Grant No. CRG/2018/002129. S.H. acknowledges the support of the Kishore Vaigyanik Protsahan Yojana (KVPY). S.H. also acknowledges helpful discussions with Harsh Arora and Johannes Fink.","department":[{"_id":"GradSch"},{"_id":"JoFi"}],"article_type":"original","date_published":"2025-04-18T00:00:00Z","quality_controlled":"1","doi":"10.1103/physrevapplied.23.044042","status":"public","publication":"Physical Review Applied","month":"04","file_date_updated":"2025-04-24T06:40:22Z","external_id":{"isi":["001490745300002"]},"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","date_updated":"2025-09-30T12:17:33Z","article_processing_charge":"Yes (via OA deal)","title":"On-demand single-microwave-photon source in a superconducting circuit with wideband frequency tunability","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"has_accepted_license":"1","isi":1,"author":[{"last_name":"Hawaldar","first_name":"Samarth","id":"221708e1-1ff6-11ee-9fa6-85146607433e","full_name":"Hawaldar, Samarth","orcid":"0000-0002-1965-4309"},{"first_name":"Siddhi Satish","last_name":"Khaire","full_name":"Khaire, Siddhi Satish"},{"full_name":"Delsing, Per","first_name":"Per","last_name":"Delsing"},{"full_name":"Suri, Baladitya","first_name":"Baladitya","last_name":"Suri"}],"ddc":["539"],"_id":"19617","scopus_import":"1","volume":23,"OA_type":"hybrid"},{"publication_identifier":{"issn":["1088-4165"]},"file":[{"file_id":"19644","checksum":"f6541ea1736a7413c6d24f14d64a4dda","creator":"dernst","success":1,"relation":"main_file","date_updated":"2025-05-05T06:57:49Z","date_created":"2025-05-05T06:57:49Z","access_level":"open_access","file_size":424364,"content_type":"application/pdf","file_name":"2025_RepresentationTheory_Nessonov.pdf"}],"year":"2025","license":"https://creativecommons.org/licenses/by/3.0/","corr_author":"1","day":"10","abstract":[{"text":"In this paper we obtain a complete description of all indecomposable characters (central positive-definite functions) of inductive limits of the symmetric groups under block diagonal embedding. As a corollary we obtain the full classification of the isomorphism classes of these inductive limits.","lang":"eng"}],"OA_place":"publisher","language":[{"iso":"eng"}],"page":"256-288","publisher":"American Mathematical Society","citation":{"ieee":"N. Nessonov and N. T. Ngo, “Indecomposable characters of inductive limits of symmetric groups,” <i>Representation Theory</i>, vol. 29, no. 8. American Mathematical Society, pp. 256–288, 2025.","ista":"Nessonov N, Ngo NT. 2025. Indecomposable characters of inductive limits of symmetric groups. Representation Theory. 29(8), 256–288.","apa":"Nessonov, N., &#38; Ngo, N. T. (2025). Indecomposable characters of inductive limits of symmetric groups. <i>Representation Theory</i>. American Mathematical Society. <a href=\"https://doi.org/10.1090/ert/689\">https://doi.org/10.1090/ert/689</a>","short":"N. Nessonov, N.T. Ngo, Representation Theory 29 (2025) 256–288.","chicago":"Nessonov, Nikolay, and Nhok T Ngo. “Indecomposable Characters of Inductive Limits of Symmetric Groups.” <i>Representation Theory</i>. American Mathematical Society, 2025. <a href=\"https://doi.org/10.1090/ert/689\">https://doi.org/10.1090/ert/689</a>.","mla":"Nessonov, Nikolay, and Nhok T. Ngo. “Indecomposable Characters of Inductive Limits of Symmetric Groups.” <i>Representation Theory</i>, vol. 29, no. 8, American Mathematical Society, 2025, pp. 256–88, doi:<a href=\"https://doi.org/10.1090/ert/689\">10.1090/ert/689</a>.","ama":"Nessonov N, Ngo NT. Indecomposable characters of inductive limits of symmetric groups. <i>Representation Theory</i>. 2025;29(8):256-288. doi:<a href=\"https://doi.org/10.1090/ert/689\">10.1090/ert/689</a>"},"publication_status":"published","acknowledgement":"The authors were partially supported by the “Long-term program of support of the Ukrainian research teams at the Polish Academy of Sciences carried out in collaboration with the U.S. National Academy of Sciences with the financial support of external partners”. The second author was also supported by the Austrian Science Fund (FWF) grant “Geometry of the tip of the global nilpotent cone” no. 10.55776/P35847","project":[{"_id":"34b2c9cb-11ca-11ed-8bc3-a50ba74ca4a3","grant_number":"P35847","name":"Geometry of the tip of the global nilpotent cone"}],"issue":"8","date_created":"2025-04-24T08:48:05Z","intvolume":"        29","fulldoi":"https://doi.org/10.1090/ert/689","oa":1,"oa_version":"Published Version","arxiv":1,"type":"journal_article","publication":"Representation Theory","month":"04","quality_controlled":"1","doi":"10.1090/ert/689","status":"public","department":[{"_id":"GradSch"},{"_id":"TaHa"}],"date_published":"2025-04-10T00:00:00Z","article_type":"original","scopus_import":"1","_id":"19621","volume":29,"OA_type":"hybrid","ddc":["510"],"author":[{"full_name":"Nessonov, Nikolay","first_name":"Nikolay","last_name":"Nessonov"},{"full_name":"Ngo, Nhok T","id":"28e53c8c-896a-11ed-bdf8-f809043ce2f0","first_name":"Nhok T","last_name":"Ngo"}],"date_updated":"2025-05-05T06:59:07Z","article_processing_charge":"Yes (in subscription journal)","title":"Indecomposable characters of inductive limits of symmetric groups","tmp":{"name":"Creative Commons Attribution 3.0 Unported (CC BY 3.0)","image":"/images/cc_by.png","short":"CC BY (3.0)","legal_code_url":"https://creativecommons.org/licenses/by/3.0/legalcode"},"has_accepted_license":"1","file_date_updated":"2025-05-05T06:57:49Z","external_id":{"arxiv":["2206.01964"]},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87"},{"author":[{"id":"331776E2-F248-11E8-B48F-1D18A9856A87","full_name":"Synak, Peter","last_name":"Synak","first_name":"Peter"}],"ddc":["519","006"],"_id":"19630","related_material":{"record":[{"relation":"part_of_dissertation","id":"8135","status":"public"},{"status":"public","relation":"part_of_dissertation","id":"17219"},{"relation":"part_of_dissertation","id":"8384","status":"public"}]},"user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","file_date_updated":"2025-04-30T15:49:16Z","has_accepted_license":"1","date_updated":"2026-04-16T08:29:34Z","title":"Methods for fluid simulation, surface tracking, and statistics of non-manifold structures","article_processing_charge":"No","doi":"10.15479/AT-ISTA-19630","status":"public","month":"04","date_published":"2025-04-29T00:00:00Z","department":[{"_id":"ChWo"},{"_id":"GradSch"}],"alternative_title":["ISTA Thesis"],"supervisor":[{"first_name":"Christopher J","last_name":"Wojtan","full_name":"Wojtan, Christopher J","orcid":"0000-0001-6646-5546","id":"3C61F1D2-F248-11E8-B48F-1D18A9856A87"}],"ec_funded":1,"project":[{"call_identifier":"H2020","name":"Big Splash: Efficient Simulation of Natural Phenomena at Extremely Large Scales","grant_number":"638176","_id":"2533E772-B435-11E9-9278-68D0E5697425"},{"_id":"34bc2376-11ca-11ed-8bc3-9a3b3961a088","grant_number":"101045083","name":"Computational Discovery of Numerical Algorithms for Animation and Simulation of Natural Phenomena"},{"call_identifier":"H2020","_id":"266A2E9E-B435-11E9-9278-68D0E5697425","name":"Alpha Shape Theory Extended","grant_number":"788183"},{"_id":"2533E772-B435-11E9-9278-68D0E5697425","grant_number":"638176","name":"Big Splash: Efficient Simulation of Natural Phenomena at Extremely Large Scales","call_identifier":"H2020"},{"call_identifier":"FWF","_id":"2561EBF4-B435-11E9-9278-68D0E5697425","grant_number":"I02979-N35","name":"Persistence and stability of geometric complexes"}],"acknowledgement":"The project in Chapter 2 has received funding from the European Research Council (ERC) under the European Union's Horizon 2020 research and innovation programme under grant agreement No. 638176. The project in Chapter 3 was funded in part by the European Union (ERC-2021-COG 101045083 CoDiNA). The project in Chapter 4 has received funding from the European Research Council (ERC) under the European Union's Horizon 2020 research and innovation programme (grant agreements No 78818 Alpha and No 638176). It was also partially supported by the DFG Collaborative Research Center TRR 109, 'Discretization in Geometry and Dynamics', through grant no. I02979-N35 of the Austrian Science Fund (FWF). Thank you for providing funds to support my work.","citation":{"chicago":"Synak, Peter. “Methods for Fluid Simulation, Surface Tracking, and Statistics of Non-Manifold Structures.” Institute of Science and Technology Austria, 2025. <a href=\"https://doi.org/10.15479/AT-ISTA-19630\">https://doi.org/10.15479/AT-ISTA-19630</a>.","short":"P. Synak, Methods for Fluid Simulation, Surface Tracking, and Statistics of Non-Manifold Structures, Institute of Science and Technology Austria, 2025.","mla":"Synak, Peter. <i>Methods for Fluid Simulation, Surface Tracking, and Statistics of Non-Manifold Structures</i>. Institute of Science and Technology Austria, 2025, doi:<a href=\"https://doi.org/10.15479/AT-ISTA-19630\">10.15479/AT-ISTA-19630</a>.","ama":"Synak P. Methods for fluid simulation, surface tracking, and statistics of non-manifold structures. 2025. doi:<a href=\"https://doi.org/10.15479/AT-ISTA-19630\">10.15479/AT-ISTA-19630</a>","ista":"Synak P. 2025. Methods for fluid simulation, surface tracking, and statistics of non-manifold structures. Institute of Science and Technology Austria.","apa":"Synak, P. (2025). <i>Methods for fluid simulation, surface tracking, and statistics of non-manifold structures</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT-ISTA-19630\">https://doi.org/10.15479/AT-ISTA-19630</a>","ieee":"P. Synak, “Methods for fluid simulation, surface tracking, and statistics of non-manifold structures,” Institute of Science and Technology Austria, 2025."},"publication_status":"published","oa_version":"Published Version","type":"dissertation","fulldoi":"https://doi.org/10.15479/AT-ISTA-19630","oa":1,"date_created":"2025-04-29T09:39:34Z","corr_author":"1","year":"2025","acknowledged_ssus":[{"_id":"ScienComp"}],"day":"29","file":[{"file_size":60670543,"content_type":"application/x-zip-compressed","file_name":"Thesis_source_Heiss_Synak.zip","checksum":"f00b519c27529daa0c3b2d4102b4fa7b","creator":"cchlebak","file_id":"19633","relation":"source_file","date_updated":"2025-04-30T14:02:25Z","date_created":"2025-04-30T14:02:25Z","access_level":"closed"},{"date_created":"2025-04-30T14:02:42Z","relation":"main_file","date_updated":"2025-04-30T15:49:16Z","access_level":"open_access","creator":"cchlebak","checksum":"6e40a2fd3b1b881af1385670854a682e","file_id":"19634","file_size":21319043,"file_name":"Thesis_PDFA_Heiss_Synak.pdf","content_type":"application/pdf"}],"publication_identifier":{"issn":["2663-337X"]},"language":[{"iso":"eng"}],"publisher":"Institute of Science and Technology Austria","page":"106","abstract":[{"text":"This thesis consists of three chapters, each corresponding to one publication. While each of these projects tackles a topic in a different area of research, they all share a common thread in the type of topological structure they handle - a partition of space into volumes separated by interfaces that meet in non-manifold junctions.\r\n\r\nIn Chapter 2, we study clusters of soap bubbles from a simulation perspective. In particular, we develop a surface-only algorithm that couples large scale motion and shape deformation of soap bubble clusters with the small scale evolution of the thin film's thickness, which is responsible for visual phenomena like surface vortices, Newton's interference patterns, capillary waves, and deformation-dependent rupturing of films in a foam. We model film thickness as a reduced degree of freedom in the Navier-Stokes equations and from them derive three sets of equations governing normal and tangential motion of the soap film surface, as well as the evolution of the thin film thickness. We discretize these equations on a non-manifold triangle mesh, extending and adapting operators to handle complex topology. We also present an incompressible fluid solver for 2.5D films and an advection algorithm for convecting fields across non-manifold surface junctions. Our simulations enhance bubble solvers with additional effects caused by convection, rippling, draining, and evaporation of the thin film.\r\n\r\nIn Chapter 3, we introduce a multi-material non-manifold mesh-based surface tracking algorithm that converts mesh defects, such as overlaps, self-intersections, and inversions into topological changes. Our algorithm generalizes prior work on manifold surface tracking with topological changes: it preserves surface features like mesh-based methods, and it robustly handles topological changes like level set methods. Our method also offers improved efficiency and robustness over the state of the art. We demonstrate the effectiveness of the approach on a range of examples, including complex soap film simulations, such as those presented in Chapter 2, but with an order of magnitude more interacting bubbles than what we could achieve before, and Boolean unions of non-manifold meshes consisting of millions of triangles.\r\n\r\nLastly, in Chapter 4, we utilize developments in the theory of random geometric complexes facilitated by observations from Discrete Morse theory. We survey the methods and results obtained with this new approach, and discuss some of its shortcomings. We use simulations to illustrate the results and to form conjectures, getting numerical estimates for combinatorial, topological, and geometric properties of weighted and unweighted Delaunay mosaics, their dual Voronoi tessellations, and the Alpha and Wrap complexes contained in the mosaics.","lang":"eng"}],"OA_place":"publisher","degree_awarded":"PhD"},{"citation":{"ieee":"L. Kopfová and J. Tkadlec, “Colonization times in Moran process on graphs,” <i>PLoS computational biology</i>, vol. 21, no. 5. Public Library of Science, p. e1012868, 2025.","apa":"Kopfová, L., &#38; Tkadlec, J. (2025). Colonization times in Moran process on graphs. <i>PLoS Computational Biology</i>. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pcbi.1012868\">https://doi.org/10.1371/journal.pcbi.1012868</a>","ista":"Kopfová L, Tkadlec J. 2025. Colonization times in Moran process on graphs. PLoS computational biology. 21(5), e1012868.","chicago":"Kopfová, Lenka, and Josef Tkadlec. “Colonization Times in Moran Process on Graphs.” <i>PLoS Computational Biology</i>. Public Library of Science, 2025. <a href=\"https://doi.org/10.1371/journal.pcbi.1012868\">https://doi.org/10.1371/journal.pcbi.1012868</a>.","short":"L. Kopfová, J. Tkadlec, PLoS Computational Biology 21 (2025) e1012868.","mla":"Kopfová, Lenka, and Josef Tkadlec. “Colonization Times in Moran Process on Graphs.” <i>PLoS Computational Biology</i>, vol. 21, no. 5, Public Library of Science, 2025, p. e1012868, doi:<a href=\"https://doi.org/10.1371/journal.pcbi.1012868\">10.1371/journal.pcbi.1012868</a>.","ama":"Kopfová L, Tkadlec J. Colonization times in Moran process on graphs. <i>PLoS computational biology</i>. 2025;21(5):e1012868. doi:<a href=\"https://doi.org/10.1371/journal.pcbi.1012868\">10.1371/journal.pcbi.1012868</a>"},"publication_status":"published","date_created":"2025-05-18T22:02:50Z","issue":"5","fulldoi":"https://doi.org/10.1371/journal.pcbi.1012868","intvolume":"        21","oa":1,"oa_version":"Published Version","arxiv":1,"type":"journal_article","publication_identifier":{"eissn":["1553-7358"]},"DOAJ_listed":"1","file":[{"file_size":6805943,"file_name":"2025_PloSCompBio_Kopfova.pdf","content_type":"application/pdf","creator":"dernst","file_id":"19709","checksum":"73e35151eebd5064972c5a07ffdf2b69","success":1,"date_created":"2025-05-19T07:45:31Z","date_updated":"2025-05-19T07:45:31Z","relation":"main_file","access_level":"open_access"}],"year":"2025","day":"01","abstract":[{"text":"Moran Birth-death process is a standard stochastic process that is used to model natural selection in spatially structured populations. A newly occurring mutation that invades a population of residents can either fixate on the whole population or it can go extinct due to random drift. The duration of the process depends not only on the total population size n, but also on the spatial structure of the population. In this work, we consider the Moran process with a single type of individuals who invade and colonize an otherwise empty environment. Mathematically, this corresponds to the setting where the residents have zero reproduction rate, thus they never reproduce. The spatial structure is represented by a graph. We present two main contributions. First, in contrast to the Moran process in which residents do reproduce, we show that the colonization time is always at most a polynomial function of the population size n. Namely, we show that colonization always takes at most 1/2n^3 - 1/2n^2 expected steps, and for each n, we identify the slowest graph where it takes exactly that many steps. Moreover, we establish a stronger bound of roughly n^2.5 steps for undirected graphs and an even stronger bound of roughly n^2 steps for so-called regular graphs. Second, we discuss various complications that one faces when attempting to measure fixation times and colonization times in spatially structured populations, and we propose to measure the real duration of the process, rather than counting the steps of the classic Moran process.","lang":"eng"}],"OA_place":"publisher","language":[{"iso":"eng"}],"publisher":"Public Library of Science","page":"e1012868","scopus_import":"1","_id":"19702","volume":21,"OA_type":"gold","isi":1,"ddc":["000"],"author":[{"first_name":"Lenka","last_name":"Kopfová","full_name":"Kopfová, Lenka","id":"17691681-50b9-11ef-ad56-edf4cacb21b0"},{"first_name":"Josef","last_name":"Tkadlec","full_name":"Tkadlec, Josef","orcid":"0000-0002-1097-9684","id":"3F24CCC8-F248-11E8-B48F-1D18A9856A87"}],"date_updated":"2025-09-30T12:34:03Z","title":"Colonization times in Moran process on graphs","article_processing_charge":"Yes","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"has_accepted_license":"1","file_date_updated":"2025-05-19T07:45:31Z","external_id":{"isi":["001481670600002"],"arxiv":["2410.09476"]},"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","publication":"PLoS computational biology","month":"05","quality_controlled":"1","doi":"10.1371/journal.pcbi.1012868","status":"public","department":[{"_id":"GradSch"}],"date_published":"2025-05-01T00:00:00Z","article_type":"original"},{"quality_controlled":"1","doi":"10.1038/s41586-025-08985-1","status":"public","publication":"Nature","month":"06","department":[{"_id":"JoDa"},{"_id":"GradSch"},{"_id":"Bio"},{"_id":"GaNo"}],"article_type":"original","date_published":"2025-06-12T00:00:00Z","PlanS_conform":"1","ec_funded":1,"isi":1,"ddc":["570"],"author":[{"orcid":"0000-0002-7667-6854","full_name":"Tavakoli, Mojtaba","id":"3A0A06F4-F248-11E8-B48F-1D18A9856A87","first_name":"Mojtaba","last_name":"Tavakoli"},{"last_name":"Lyudchik","first_name":"Julia","id":"46E28B80-F248-11E8-B48F-1D18A9856A87","full_name":"Lyudchik, Julia"},{"full_name":"Januszewski, Michał","last_name":"Januszewski","first_name":"Michał"},{"last_name":"Vistunou","first_name":"Vitali","id":"7e146587-8972-11ed-ae7b-d7a32ea86a81","full_name":"Vistunou, Vitali"},{"last_name":"Agudelo Duenas","first_name":"Nathalie","id":"40E7F008-F248-11E8-B48F-1D18A9856A87","full_name":"Agudelo Duenas, Nathalie"},{"orcid":"0009-0000-7590-3501","full_name":"Vorlaufer, Jakob","id":"937696FA-C996-11E9-8C7C-CF13E6697425","first_name":"Jakob","last_name":"Vorlaufer"},{"first_name":"Christoph M","last_name":"Sommer","full_name":"Sommer, Christoph M","orcid":"0000-0003-1216-9105","id":"4DF26D8C-F248-11E8-B48F-1D18A9856A87"},{"id":"382077BA-F248-11E8-B48F-1D18A9856A87","full_name":"Kreuzinger, Caroline","last_name":"Kreuzinger","first_name":"Caroline"},{"full_name":"Oliveira, Bárbara","id":"3B03AA1A-F248-11E8-B48F-1D18A9856A87","first_name":"Bárbara","last_name":"Oliveira"},{"full_name":"Cenameri, Alban","id":"9ac8f577-2357-11eb-997a-e566c5550886","first_name":"Alban","last_name":"Cenameri"},{"first_name":"Gaia","last_name":"Novarino","full_name":"Novarino, Gaia","orcid":"0000-0002-7673-7178","id":"3E57A680-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Jain, Viren","last_name":"Jain","first_name":"Viren"},{"id":"42EFD3B6-F248-11E8-B48F-1D18A9856A87","full_name":"Danzl, Johann G","orcid":"0000-0001-8559-3973","last_name":"Danzl","first_name":"Johann G"}],"scopus_import":"1","_id":"19704","volume":642,"OA_type":"hybrid","file_date_updated":"2025-07-03T06:55:20Z","external_id":{"isi":["001483477000001"],"pmid":["40335689"]},"related_material":{"link":[{"url":"https://ista.ac.at/en/news/piecing-together-the-brain-puzzle/","relation":"press_release","description":"News on ISTA website"}],"record":[{"status":"public","relation":"earlier_version","id":"18677"},{"id":"18697","relation":"research_data","status":"public"}]},"user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","date_updated":"2026-04-28T13:33:34Z","article_processing_charge":"Yes (via OA deal)","title":"Light-microscopy-based connectomic reconstruction of mammalian brain tissue","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"has_accepted_license":"1","file":[{"file_size":133201290,"content_type":"application/pdf","file_name":"2025_Nature_Tavakoli.pdf","date_updated":"2025-07-03T06:55:20Z","relation":"main_file","date_created":"2025-07-03T06:55:20Z","access_level":"open_access","file_id":"19959","creator":"dernst","checksum":"ebc99d7108e728f46db0a009292675ef","success":1}],"year":"2025","corr_author":"1","day":"12","acknowledged_ssus":[{"_id":"Bio"},{"_id":"LifeSc"},{"_id":"ScienComp"},{"_id":"PreCl"},{"_id":"M-Shop"},{"_id":"E-Lib"}],"publication_identifier":{"issn":["0028-0836"],"eissn":["1476-4687"]},"language":[{"iso":"eng"}],"publisher":"Springer Nature","page":"398-410","abstract":[{"lang":"eng","text":"The information-processing capability of the brain’s cellular network depends on the physical wiring pattern between neurons and their molecular and functional characteristics. Mapping neurons and resolving their individual synaptic connections can be achieved by volumetric imaging at nanoscale resolution1,2 with dense cellular labelling. Light microscopy is uniquely positioned to visualize specific molecules, but dense, synapse-level circuit reconstruction by light microscopy has been out of reach, owing to limitations in resolution, contrast and volumetric imaging capability. Here we describe light-microscopy-based connectomics (LICONN). We integrated specifically engineered hydrogel embedding and expansion with comprehensive deep-learning-based segmentation and analysis of connectivity, thereby directly incorporating molecular information into synapse-level reconstructions of brain tissue. LICONN will allow synapse-level phenotyping of brain tissue in biological experiments in a readily adoptable manner."}],"OA_place":"publisher","project":[{"_id":"6285a163-2b32-11ec-9570-8e204ca2dba5","grant_number":"26137","name":"Studying Organelle Structure and Function at Nanoscale Resolution with Expansion Microscopy"},{"name":"International IST Doctoral Program","grant_number":"665385","_id":"2564DBCA-B435-11E9-9278-68D0E5697425","call_identifier":"H2020"},{"_id":"34ba8964-11ca-11ed-8bc3-e15864e7e9a6","name":"Toward an understanding of the brain interstitial system and the extracellular proteome in health and autism spectrum disorders","grant_number":"101044865"},{"_id":"26AA4EF2-B435-11E9-9278-68D0E5697425","name":"Molecular Drug Targets","grant_number":"W1232-B24","call_identifier":"FWF"}],"citation":{"ista":"Tavakoli M, Lyudchik J, Januszewski M, Vistunou V, Agudelo Duenas N, Vorlaufer J, Sommer CM, Kreuzinger C, Oliveira B, Cenameri A, Novarino G, Jain V, Danzl JG. 2025. Light-microscopy-based connectomic reconstruction of mammalian brain tissue. Nature. 642, 398–410.","apa":"Tavakoli, M., Lyudchik, J., Januszewski, M., Vistunou, V., Agudelo Duenas, N., Vorlaufer, J., … Danzl, J. G. (2025). Light-microscopy-based connectomic reconstruction of mammalian brain tissue. <i>Nature</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41586-025-08985-1\">https://doi.org/10.1038/s41586-025-08985-1</a>","ieee":"M. Tavakoli <i>et al.</i>, “Light-microscopy-based connectomic reconstruction of mammalian brain tissue,” <i>Nature</i>, vol. 642. Springer Nature, pp. 398–410, 2025.","short":"M. Tavakoli, J. Lyudchik, M. Januszewski, V. Vistunou, N. Agudelo Duenas, J. Vorlaufer, C.M. Sommer, C. Kreuzinger, B. Oliveira, A. Cenameri, G. Novarino, V. Jain, J.G. Danzl, Nature 642 (2025) 398–410.","chicago":"Tavakoli, Mojtaba, Julia Lyudchik, Michał Januszewski, Vitali Vistunou, Nathalie Agudelo Duenas, Jakob Vorlaufer, Christoph M Sommer, et al. “Light-Microscopy-Based Connectomic Reconstruction of Mammalian Brain Tissue.” <i>Nature</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1038/s41586-025-08985-1\">https://doi.org/10.1038/s41586-025-08985-1</a>.","mla":"Tavakoli, Mojtaba, et al. “Light-Microscopy-Based Connectomic Reconstruction of Mammalian Brain Tissue.” <i>Nature</i>, vol. 642, Springer Nature, 2025, pp. 398–410, doi:<a href=\"https://doi.org/10.1038/s41586-025-08985-1\">10.1038/s41586-025-08985-1</a>.","ama":"Tavakoli M, Lyudchik J, Januszewski M, et al. Light-microscopy-based connectomic reconstruction of mammalian brain tissue. <i>Nature</i>. 2025;642:398-410. doi:<a href=\"https://doi.org/10.1038/s41586-025-08985-1\">10.1038/s41586-025-08985-1</a>"},"pmid":1,"publication_status":"published","acknowledgement":"We thank S. Dorkenwald and P. Li for critical reading of the manuscript, S. Loomba for discussions and E. Miguel for support with data handling. We acknowledge support from ISTA’s scientific service units: Imaging and Optics, Lab Support, Scientific Computing, the preclinical facility, the Miba Machine Shop and the library. We acknowledge funding from the following sources: Austrian Science Fund (FWF) grant DK W1232 (J.G.D. and M.R.T.); Austrian Academy of Sciences DOC fellowship 26137 (M.R.T.); Gesellschaft für Forschungsförderung NÖ (NFB) grant LSC18-022 (J.G.D.); the European Union’s Horizon 2020 research and innovation programme and Marie Skłodowska-Curie Actions Fellowship 665385 (J.L.); and the European Union’s Horizon 2020 research and innovation programme and European Research Council (ERC) grant 101044865 ‘SecretAutism’ (G.N.).Open access funding provided by Institute of Science and Technology (IST Austria).","intvolume":"       642","fulldoi":"https://doi.org/10.1038/s41586-025-08985-1","oa":1,"oa_version":"Published Version","type":"journal_article","date_created":"2025-05-18T22:02:51Z"},{"citation":{"ieee":"A. Acharya, K. Azari, M. A. Baig, D. Hofheinz, and C. Kamath, “Securely instantiating ‘Half Gates’ garbling in the standard model,” in <i>28th IACR International Conference on Practice and Theory of Public-Key Cryptography</i>, Roros, Norway, 2025, vol. 15677, pp. 37–75.","ista":"Acharya A, Azari K, Baig MA, Hofheinz D, Kamath C. 2025. Securely instantiating ‘Half Gates’ garbling in the standard model. 28th IACR International Conference on Practice and Theory of Public-Key Cryptography. PKC: Public-Key Cryptography, LNCS, vol. 15677, 37–75.","apa":"Acharya, A., Azari, K., Baig, M. A., Hofheinz, D., &#38; Kamath, C. (2025). Securely instantiating ‘Half Gates’ garbling in the standard model. In <i>28th IACR International Conference on Practice and Theory of Public-Key Cryptography</i> (Vol. 15677, pp. 37–75). Roros, Norway: Springer Nature. <a href=\"https://doi.org/10.1007/978-3-031-91829-2_2\">https://doi.org/10.1007/978-3-031-91829-2_2</a>","chicago":"Acharya, Anasuya, Karen Azari, Mirza Ahad Baig, Dennis Hofheinz, and Chethan Kamath. “Securely Instantiating ‘Half Gates’ Garbling in the Standard Model.” In <i>28th IACR International Conference on Practice and Theory of Public-Key Cryptography</i>, 15677:37–75. Springer Nature, 2025. <a href=\"https://doi.org/10.1007/978-3-031-91829-2_2\">https://doi.org/10.1007/978-3-031-91829-2_2</a>.","short":"A. Acharya, K. Azari, M.A. Baig, D. Hofheinz, C. Kamath, in:, 28th IACR International Conference on Practice and Theory of Public-Key Cryptography, Springer Nature, 2025, pp. 37–75.","mla":"Acharya, Anasuya, et al. “Securely Instantiating ‘Half Gates’ Garbling in the Standard Model.” <i>28th IACR International Conference on Practice and Theory of Public-Key Cryptography</i>, vol. 15677, Springer Nature, 2025, pp. 37–75, doi:<a href=\"https://doi.org/10.1007/978-3-031-91829-2_2\">10.1007/978-3-031-91829-2_2</a>.","ama":"Acharya A, Azari K, Baig MA, Hofheinz D, Kamath C. Securely instantiating ‘Half Gates’ garbling in the standard model. In: <i>28th IACR International Conference on Practice and Theory of Public-Key Cryptography</i>. Vol 15677. Springer Nature; 2025:37-75. doi:<a href=\"https://doi.org/10.1007/978-3-031-91829-2_2\">10.1007/978-3-031-91829-2_2</a>"},"main_file_link":[{"url":"https://eprint.iacr.org/2025/281","open_access":"1"}],"date_created":"2025-05-25T22:17:02Z","oa_version":"Preprint","type":"conference","fulldoi":"https://doi.org/10.1007/978-3-031-91829-2_2","intvolume":"     15677","oa":1,"publication_identifier":{"issn":["0302-9743"],"isbn":["9783031918285"],"eissn":["1611-3349"]},"year":"2025","day":"05","abstract":[{"lang":"eng","text":"Garbling is a fundamental cryptographic primitive, with numerous theoretical and practical applications. Since the first construction by Yao (FOCS’82, ’86), a line of work has concerned itself with reducing the communication and computational complexity of that construction. One of the most efficient garbling schemes presently is the ‘Half Gates’ scheme by Zahur, Rosulek, and Evans (Eurocrypt’15). Despite its widespread adoption, the provable security of this scheme has been based on assumptions whose only instantiations are in idealized models. For example, in their original paper, Zahur, Rosulek, and Evans showed that hash functions satisfying a notion called circular correlation robustness (CCR) suffice for this task, and then proved that CCR secure hash functions can be instantiated in the random permutation model.\r\nIn this work, we show how to securely instantiate the Half Gates scheme in the standard model. To this end, we first show how this scheme can be securely instantiated given a (family of) weak CCR hash function, a notion that we introduce. Furthermore, we show how a weak CCR hash function can be used to securely instantiate other efficient garbling schemes, namely the ones by Rosulek and Roy (Crypto’21) and Heath (Eurocrypt’24). Thus we believe this notion to be of independent interest.\r\nFinally, we construct such weak CCR hash functions using indistinguishability obfuscation and one-way functions. The security proof of this construction constitutes our main technical contribution. While our construction is not practical, it serves as a proof of concept supporting the soundness of these garbling schemes, which we regard to be particularly important given the recent initiative by NIST to standardize garbling, and the optimizations in Half Gates being potentially adopted."}],"OA_place":"repository","language":[{"iso":"eng"}],"page":"37-75","publisher":"Springer Nature","OA_type":"green","_id":"19738","scopus_import":"1","volume":15677,"author":[{"full_name":"Acharya, Anasuya","first_name":"Anasuya","last_name":"Acharya"},{"first_name":"Karen","last_name":"Azari","full_name":"Azari, Karen"},{"id":"3EDE6DE4-AA5A-11E9-986D-341CE6697425","full_name":"Baig, Mirza Ahad","last_name":"Baig","first_name":"Mirza Ahad"},{"first_name":"Dennis","last_name":"Hofheinz","full_name":"Hofheinz, Dennis"},{"full_name":"Kamath, Chethan","first_name":"Chethan","last_name":"Kamath"}],"conference":{"name":"PKC: Public-Key Cryptography","start_date":"2025-05-12","end_date":"2025-05-15","location":"Roros, Norway"},"date_updated":"2025-06-02T07:01:45Z","title":"Securely instantiating ‘Half Gates’ garbling in the standard model","article_processing_charge":"No","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","month":"05","publication":"28th IACR International Conference on Practice and Theory of Public-Key Cryptography","doi":"10.1007/978-3-031-91829-2_2","status":"public","quality_controlled":"1","date_published":"2025-05-05T00:00:00Z","department":[{"_id":"KrPi"},{"_id":"GradSch"}],"alternative_title":["LNCS"]},{"publication_identifier":{"eissn":["1611-3349"],"isbn":["9783031918193"],"issn":["0302-9743"],"eisbn":["9783031918209"]},"day":"01","corr_author":"1","year":"2025","OA_place":"repository","abstract":[{"lang":"eng","text":"A verifiable delay function VDF(x, T)->(y, π) maps an input x and time parameter T to an output y together with an efficiently verifiable proof π certifying that y was correctly computed. The function runs in T sequential steps, and it should not be possible to compute y much faster than that. The only known practical VDFs use sequential squaring in groups of unknown order as the sequential function, i.e., y = x^2^T. There are two constructions for the proof of exponentiation (PoE) certifying that y = x^2^T, with Wesolowski (Eurocrypt’19) having very short proofs, but they are more expensive to compute and the soundness relies on stronger assumptions than the PoE proposed by Pietrzak (ITCS’19).\r\nA recent application of VDFs by Arun, Bonneau and Clark (Asiacrypt’22) are short-lived proofs and signatures, which are proofs and signatures that are only sound for some time t, but after that can be forged by anyone. For this they rely on “watermarkable VDFs”, where the proof embeds a prover chosen watermark. To achieve stronger notions of proofs/signatures with reusable forgeability, they rely on “zero-knowledge VDFs”, where instead of the output y, one just proves knowledge of this output. The existing proposals for watermarkable and zero-knowledge VDFs all build on Wesolowski’s PoE, for the watermarkable VDFs there’s currently no security proof.\r\n\r\nIn this work we give the first constructions that transform any PoEs in hidden order groups into watermarkable VDFs and into zkVDFs, solving an open question by Arun et al. Unlike our watermarkable VDF, the zkVDF (required for reusable forgeability) is not very practical as the number of group elements in the proof is a security parameter. To address this, we introduce the notion of zero-knowledge proofs of sequential work (zkPoSW), a notion that relaxes zkVDFs by not requiring that the output is unique. We show that zkPoSW are sufficient to construct proofs or signatures with reusable forgeability, and construct efficient zkPoSW from any PoE, ultimately achieving short lived proofs and signatures that improve upon Arun et al.’s construction in several dimensions (faster forging times, arguably weaker assumptions).\r\nA key idea underlying our constructions is to not directly construct a (watermarked or zk) proof for y = x^2^T, but instead give a (watermarked or zk) proof for the more basic statement that \r\nx^l, y^l satisfy x^l = x ^r, y^l = y^r for some r, together with a normal PoE for y^l = (x^l)^2^T."}],"page":"36-66","publisher":"Springer Nature","language":[{"iso":"eng"}],"publication_status":"published","citation":{"ieee":"C. Hoffmann and K. Z. Pietrzak, “Watermarkable and zero-knowledge Verifiable Delay Functions from any proof of exponentiation,” in <i>28th IACR International Conference on Practice and Theory of Public-Key Cryptography</i>, Roros, Norway, 2025, vol. 15674, pp. 36–66.","apa":"Hoffmann, C., &#38; Pietrzak, K. Z. (2025). Watermarkable and zero-knowledge Verifiable Delay Functions from any proof of exponentiation. In <i>28th IACR International Conference on Practice and Theory of Public-Key Cryptography</i> (Vol. 15674, pp. 36–66). Roros, Norway: Springer Nature. <a href=\"https://doi.org/10.1007/978-3-031-91820-9_2\">https://doi.org/10.1007/978-3-031-91820-9_2</a>","ista":"Hoffmann C, Pietrzak KZ. 2025. Watermarkable and zero-knowledge Verifiable Delay Functions from any proof of exponentiation. 28th IACR International Conference on Practice and Theory of Public-Key Cryptography. PKC: Public-Key Cryptography, LNCS, vol. 15674, 36–66.","ama":"Hoffmann C, Pietrzak KZ. Watermarkable and zero-knowledge Verifiable Delay Functions from any proof of exponentiation. In: <i>28th IACR International Conference on Practice and Theory of Public-Key Cryptography</i>. Vol 15674. Springer Nature; 2025:36-66. doi:<a href=\"https://doi.org/10.1007/978-3-031-91820-9_2\">10.1007/978-3-031-91820-9_2</a>","mla":"Hoffmann, Charlotte, and Krzysztof Z. Pietrzak. “Watermarkable and Zero-Knowledge Verifiable Delay Functions from Any Proof of Exponentiation.” <i>28th IACR International Conference on Practice and Theory of Public-Key Cryptography</i>, vol. 15674, Springer Nature, 2025, pp. 36–66, doi:<a href=\"https://doi.org/10.1007/978-3-031-91820-9_2\">10.1007/978-3-031-91820-9_2</a>.","short":"C. Hoffmann, K.Z. Pietrzak, in:, 28th IACR International Conference on Practice and Theory of Public-Key Cryptography, Springer Nature, 2025, pp. 36–66.","chicago":"Hoffmann, Charlotte, and Krzysztof Z Pietrzak. “Watermarkable and Zero-Knowledge Verifiable Delay Functions from Any Proof of Exponentiation.” In <i>28th IACR International Conference on Practice and Theory of Public-Key Cryptography</i>, 15674:36–66. Springer Nature, 2025. <a href=\"https://doi.org/10.1007/978-3-031-91820-9_2\">https://doi.org/10.1007/978-3-031-91820-9_2</a>."},"main_file_link":[{"open_access":"1","url":"https://ia.cr/2024/481"}],"date_created":"2025-06-03T07:30:21Z","oa":1,"fulldoi":"https://doi.org/10.1007/978-3-031-91820-9_2","intvolume":"     15674","type":"conference","oa_version":"Preprint","publication":"28th IACR International Conference on Practice and Theory of Public-Key Cryptography","month":"01","quality_controlled":"1","status":"public","doi":"10.1007/978-3-031-91820-9_2","alternative_title":["LNCS"],"department":[{"_id":"KrPi"},{"_id":"GradSch"}],"date_published":"2025-01-01T00:00:00Z","volume":15674,"scopus_import":"1","_id":"19778","OA_type":"green","conference":{"location":"Roros, Norway","end_date":"2025-05-15","start_date":"2025-05-12","name":"PKC: Public-Key Cryptography"},"author":[{"id":"0f78d746-dc7d-11ea-9b2f-83f92091afe7","orcid":"0000-0003-2027-5549","full_name":"Hoffmann, Charlotte","last_name":"Hoffmann","first_name":"Charlotte"},{"id":"3E04A7AA-F248-11E8-B48F-1D18A9856A87","full_name":"Pietrzak, Krzysztof Z","orcid":"0000-0002-9139-1654","last_name":"Pietrzak","first_name":"Krzysztof Z"}],"article_processing_charge":"No","title":"Watermarkable and zero-knowledge Verifiable Delay Functions from any proof of exponentiation","date_updated":"2026-04-16T09:11:09Z","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","related_material":{"record":[{"status":"public","id":"20920","relation":"dissertation_contains"},{"id":"20556","relation":"dissertation_contains","status":"public"}]}},{"department":[{"_id":"MaSe"},{"_id":"GradSch"}],"date_published":"2025-06-18T00:00:00Z","article_type":"original","quality_controlled":"1","status":"public","doi":"10.1103/k4jh-pnxy","publication":"Physical Review B","month":"06","external_id":{"isi":["001514328000004"],"arxiv":["2412.04084"]},"file_date_updated":"2025-06-23T10:31:11Z","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","title":"Superconducting proximity effect in two-dimensional hole gases","article_processing_charge":"Yes (via OA deal)","date_updated":"2025-09-30T12:53:47Z","has_accepted_license":"1","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"isi":1,"author":[{"id":"e63d75c3-72ef-11ef-b75a-e303e149911f","full_name":"Babkin, Serafim","last_name":"Babkin","first_name":"Serafim"},{"full_name":"Joecker, Benjamin","first_name":"Benjamin","last_name":"Joecker"},{"first_name":"Karsten","last_name":"Flensberg","full_name":"Flensberg, Karsten"},{"id":"47809E7E-F248-11E8-B48F-1D18A9856A87","full_name":"Serbyn, Maksym","orcid":"0000-0002-2399-5827","last_name":"Serbyn","first_name":"Maksym"},{"full_name":"Danon, Jeroen","last_name":"Danon","first_name":"Jeroen"}],"ddc":["530"],"volume":111,"_id":"19852","scopus_import":"1","OA_type":"hybrid","publisher":"American Physical Society","language":[{"iso":"eng"}],"OA_place":"publisher","article_number":"214518","abstract":[{"text":"Technology involving hybrid superconductor–semiconductor materials is a promising avenue for engineering quantum devices for information storage, manipulation, and transmission. Proximity-induced superconducting correlations are an essential part of such devices. While the proximity effect in the conduction band of common semiconductors is well understood, its manifestation in confined hole gases, realized for instance in germanium, is an active area of research. Lower-dimensional hole-based systems, particularly in germanium, are emerging as an attractive platform for a variety of solid-state quantum devices, due to their combination of efficient spin and charge control and long coherence times. The recent experimental realization of the proximity effect in germanium thus calls for a theoretical description that is tailored to hole gases. In this work, we propose a simple model to describe proximity-induced superconductivity in two-dimensional hole gases, incorporating both the heavy-hole (HH) and light-hole (LH) bands. We start from the Luttinger–Kohn model, introduce three parameters that characterize hopping across the superconductor–semiconductor interface, and derive explicit intraband and interband effective pairing terms for the HH and LH bands. Unlike previous approaches, our theory provides a quantitative relationship between induced pairings and interface properties. Restricting our general model to an experimentally relevant case where only the HH band crosses the chemical potential, we predict the coexistence of 𝑠-wave and 𝑑-wave singlet pairings, along with triplet-type pairings, and modified Zeeman and Rashba spin–orbit couplings. Our results thus present a starting point for theoretical modeling of quantum devices based on proximitized hole gases, fueling further progress in quantum technology.","lang":"eng"}],"file":[{"content_type":"application/pdf","file_name":"2025_PhysReviewB_Babkin.pdf","file_size":1719489,"access_level":"open_access","date_updated":"2025-06-23T10:31:11Z","relation":"main_file","date_created":"2025-06-23T10:31:11Z","success":1,"file_id":"19869","creator":"dernst","checksum":"fa8757f4780cfaeb51579c626284a8c1"}],"day":"18","corr_author":"1","year":"2025","publication_identifier":{"eissn":["2469-9969"],"issn":["2469-9950"]},"oa":1,"fulldoi":"https://doi.org/10.1103/k4jh-pnxy","intvolume":"       111","type":"journal_article","arxiv":1,"oa_version":"Published Version","issue":"21","date_created":"2025-06-19T16:54:54Z","project":[{"name":"Center for Correlated Quantum Materials and Solid State Quantum Systems:  Probing topology in circuits and quantum materials","grant_number":"F8609","_id":"34a7f947-11ca-11ed-8bc3-c5dc2bbaae25"}],"publication_status":"published","citation":{"apa":"Babkin, S., Joecker, B., Flensberg, K., Serbyn, M., &#38; Danon, J. (2025). Superconducting proximity effect in two-dimensional hole gases. <i>Physical Review B</i>. American Physical Society. <a href=\"https://doi.org/10.1103/k4jh-pnxy\">https://doi.org/10.1103/k4jh-pnxy</a>","ista":"Babkin S, Joecker B, Flensberg K, Serbyn M, Danon J. 2025. Superconducting proximity effect in two-dimensional hole gases. Physical Review B. 111(21), 214518.","ieee":"S. Babkin, B. Joecker, K. Flensberg, M. Serbyn, and J. Danon, “Superconducting proximity effect in two-dimensional hole gases,” <i>Physical Review B</i>, vol. 111, no. 21. American Physical Society, 2025.","mla":"Babkin, Serafim, et al. “Superconducting Proximity Effect in Two-Dimensional Hole Gases.” <i>Physical Review B</i>, vol. 111, no. 21, 214518, American Physical Society, 2025, doi:<a href=\"https://doi.org/10.1103/k4jh-pnxy\">10.1103/k4jh-pnxy</a>.","ama":"Babkin S, Joecker B, Flensberg K, Serbyn M, Danon J. Superconducting proximity effect in two-dimensional hole gases. <i>Physical Review B</i>. 2025;111(21). doi:<a href=\"https://doi.org/10.1103/k4jh-pnxy\">10.1103/k4jh-pnxy</a>","short":"S. Babkin, B. Joecker, K. Flensberg, M. Serbyn, J. Danon, Physical Review B 111 (2025).","chicago":"Babkin, Serafim, Benjamin Joecker, Karsten Flensberg, Maksym Serbyn, and Jeroen Danon. “Superconducting Proximity Effect in Two-Dimensional Hole Gases.” <i>Physical Review B</i>. American Physical Society, 2025. <a href=\"https://doi.org/10.1103/k4jh-pnxy\">https://doi.org/10.1103/k4jh-pnxy</a>."},"acknowledgement":"We acknowledge useful discussions with Georgios Katsaros, Andrew Higginbotham, and Oliver Schwarze. This research was funded in part by the Austrian Science Fund (FWF) F 86, the European Research Council (Grant Agreement No. 856526), and by the DFG Collaborative Research Center (CRC) 183 Project No. 277101999."},{"user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","file_date_updated":"2025-10-09T14:38:57Z","has_accepted_license":"1","title":"Exploring internal magnetism in partially suppressed red giant stars","article_processing_charge":"No","date_updated":"2026-04-07T12:01:37Z","ddc":["520"],"author":[{"id":"7703505d-3211-11ee-a6a9-a2ab9d936c15","full_name":"Smith, Kanah","last_name":"Smith","first_name":"Kanah"}],"_id":"19853","date_published":"2025-10-08T00:00:00Z","supervisor":[{"first_name":"Lisa Annabelle","last_name":"Bugnet","full_name":"Bugnet, Lisa Annabelle","orcid":"0000-0003-0142-4000","id":"d9edb345-f866-11ec-9b37-d119b5234501"}],"alternative_title":["ISTA Master's Thesis"],"department":[{"_id":"GradSch"},{"_id":"LiBu"}],"keyword":["asteroseismology","stellar physics","red giant","magnetism","suppressed"],"status":"public","doi":"10.15479/AT-ISTA-19853","month":"10","type":"dissertation","oa_version":"Published Version","oa":1,"fulldoi":"https://doi.org/10.15479/AT-ISTA-19853","date_created":"2025-06-20T13:27:08Z","acknowledgement":"I would like to give thanks to myself for my hard work on this document. This paper includes data collected by the Kepler mission and obtained from the MAST data\r\narchive at the Space Telescope Science Institute (STScI). Funding for the Kepler mission is\r\nprovided by the NASA Science Mission Directorate. STScI is operated by the Association of\r\nUniversities for Research in Astronomy, Inc., under NASA contract NAS 5–26555.\r\n","publication_status":"published","citation":{"ieee":"K. Smith, “Exploring internal magnetism in partially suppressed red giant stars,” Institute of Science and Technology Austria, 2025.","apa":"Smith, K. (2025). <i>Exploring internal magnetism in partially suppressed red giant stars</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT-ISTA-19853\">https://doi.org/10.15479/AT-ISTA-19853</a>","ista":"Smith K. 2025. Exploring internal magnetism in partially suppressed red giant stars. Institute of Science and Technology Austria.","mla":"Smith, Kanah. <i>Exploring Internal Magnetism in Partially Suppressed Red Giant Stars</i>. Institute of Science and Technology Austria, 2025, doi:<a href=\"https://doi.org/10.15479/AT-ISTA-19853\">10.15479/AT-ISTA-19853</a>.","ama":"Smith K. Exploring internal magnetism in partially suppressed red giant stars. 2025. doi:<a href=\"https://doi.org/10.15479/AT-ISTA-19853\">10.15479/AT-ISTA-19853</a>","short":"K. Smith, Exploring Internal Magnetism in Partially Suppressed Red Giant Stars, Institute of Science and Technology Austria, 2025.","chicago":"Smith, Kanah. “Exploring Internal Magnetism in Partially Suppressed Red Giant Stars.” Institute of Science and Technology Austria, 2025. <a href=\"https://doi.org/10.15479/AT-ISTA-19853\">https://doi.org/10.15479/AT-ISTA-19853</a>."},"publisher":"Institute of Science and Technology Austria","page":"38","language":[{"iso":"eng"}],"OA_place":"publisher","abstract":[{"lang":"eng","text":"The internal dynamical properties of red giant stars have been explored extensively in recent\r\nyears as a result of the increase in high precision data availability from the space missions\r\nKepler and TESS (Transiting Exoplanet Survey Satellite), and in this exploration, it has been\r\ndiscovered that some of these stars are not behaving as expected. Red giants are stars that have\r\nevolved off of the main sequence after having completed fusing hydrogen into helium in their\r\ncore. Observational data shows that the cores are rotating significantly slower than models can\r\nrecreate consistently across evolutionary stages. This discrepancy has prompted investigation\r\ninto the efficiency of angular momentum transport mechanisms and mixing processes including\r\nmeridional circulation, shear instability, internal gravity waves, Tayler-Spruit dynamo, fossil\r\nmagnetic fields etc., to explain this behavior.\r\nAnalyzing seismic oscillations in stars, via asteroseismology, is a powerful tool as it is the only\r\nway in which the deep stellar interior can be probed and subsequently characterized; this is\r\npossible as global oscillations modulating the stellar surface are effected by internal processes.\r\nFor red giants, p-modes (pressure modes; resonating through the entire star) and g-modes\r\n(gravity-modes; resonating in the radiative interior) couple to create mixed modes. These\r\nmixed modes give access to the otherwise hidden stellar interior as g-modes couple to p-modes,\r\ndelivering information from the interior to the surface.\r\nInternal magnetic signatures have been observationally confirmed in red giant stars via\r\nasteroseismology and characterized in two ways. One being that dipole mixed modes with\r\nℓ = 1 will display a global asymmetric frequency shift of its azimuthal components; where\r\nthe m = 0 and m = ±1 components of the ℓ = 1 dipole mode will be shifted by two\r\ndifferent power laws, respectively. And the other being a reduced visibility of dipole mixed\r\nmode amplitudes in the power spectra, where stars presenting with this feature are denoted as\r\nsuppressed.\r\nSeveral studies of the suppressed dipole mixed mode amplitudes have been carried out, but thus\r\nfar, no dedicated studies of the asymmetric frequency shifts of suppressed red giants have been\r\nconducted; one reason being that the asymmetric frequency shifts cannot be characterized\r\nwhen the dipole mixed mode amplitudes are severely reduced in many of the suppressed stars.\r\nSincefullysuppressedstarsdonothavedetectablemixed-modestoevaluate, partiallysuppressed\r\nstars, that is, red giant stars presenting with suppressed dipole mixed modes in select parts of\r\ntheir power spectra rather than across the entire spectra, will be the subject of this study as\r\nthe respective mode amplitudes are still visible at high frequencies.\r\nAs such, this study will search for asymmetric frequency shifts on the dipole mixed\r\nmodes of partially suppressed red giant stars; the aim here is to investigate if both\r\nmode suppression and magnetic shifting of dipole mixed modes occur simultaneously.\r\nThisstudywillbeconductedbycreatingapipelinetoestimatepriorsofasteroseismicparameters,\r\nuse the priors to model the power spectra with the stellar modeling code sloscillations_ISTA,\r\nand perform a Bayesian fit of the parameters with the simulated data on the star KIC 6975038,\r\na target with partially suppressed dipolar mode amplitudes identified in the literature, to fit its\r\nmagnetic parameters. I present a novel method to model the stellar power spectra of\r\npartially suppressed red giants by application of a sigmoid profile to the ℓ= 1 dipolar\r\nmode component of the spectra. With the results of this study I aim at constraining\r\nthe cause of this partial dipole mode amplitude suppression, allowing for more detailed\r\nstudies regarding their astrophysical nature. Furthermore, the long term hope for the method\r\nused in this study will be to expand the sample of partially suppressed red giants and fit their\r\nasteroseismic parameters accordingly."}],"degree_awarded":"MS","day":"08","year":"2025","corr_author":"1","file":[{"file_size":8263624,"content_type":"application/zip","file_name":"2025_Smith_Kanah_Thesis.zip","date_updated":"2025-10-08T09:45:33Z","relation":"source_file","date_created":"2025-10-08T08:01:42Z","access_level":"closed","checksum":"80d241d11b69af771c1fab0998be4f19","file_id":"20434","creator":"ksmith"},{"access_level":"open_access","date_created":"2025-10-09T14:38:57Z","date_updated":"2025-10-09T14:38:57Z","relation":"main_file","success":1,"checksum":"13cb48cc98e00fdfe32f3ff66f17aa26","file_id":"20439","creator":"ksmith","file_name":"2025_Smith_Kanah_Thesis.pdf","content_type":"application/pdf","file_size":9748339}],"publication_identifier":{"issn":["2791-4585"]}},{"abstract":[{"lang":"eng","text":"This .zip file contains the data to reproduce the figures and supplementary figures of \"Automated All-RF Tuning for Spin Qubit Readout and Control\" by Cornelius Carlsson and Jaime Saez-Mollejo et al."}],"contributor":[{"last_name":"Carlsson","contributor_type":"researcher","first_name":"Cornelius"},{"contributor_type":"researcher","first_name":"Federico ","last_name":"Fedele"},{"first_name":"Stefano","contributor_type":"researcher","last_name":"Calcaterra"},{"last_name":"Chrastina","first_name":" Daniel ","contributor_type":"researcher"},{"contributor_type":"researcher","first_name":"Giovanni ","last_name":"Isella"},{"orcid":"0000-0001-8342-202X","id":"38DB5788-F248-11E8-B48F-1D18A9856A87","contributor_type":"researcher","first_name":"Georgios","last_name":"Katsaros"},{"contributor_type":"researcher","first_name":"Natalia","last_name":"Ares"}],"publisher":"Institute of Science and Technology Austria","year":"2025","corr_author":"1","acknowledged_ssus":[{"_id":"M-Shop"},{"_id":"NanoFab"}],"day":"01","file":[{"file_name":"DatasetsPaper.zip","content_type":"application/x-zip-compressed","file_size":3404814792,"success":1,"creator":"jsaezmol","file_id":"19893","checksum":"eff1ae9e46599fdfab8da00a2ca3c289","access_level":"open_access","date_created":"2025-06-24T15:14:13Z","relation":"main_file","date_updated":"2025-06-24T15:14:13Z"},{"creator":"jsaezmol","file_id":"19899","checksum":"21840ceac04d677a799b8e5bd919804f","success":1,"date_created":"2025-06-25T07:11:52Z","relation":"main_file","date_updated":"2025-06-25T07:11:52Z","access_level":"open_access","file_size":622,"file_name":"README.txt","content_type":"text/plain"}],"date_created":"2025-06-24T06:56:03Z","oa_version":"Published Version","type":"research_data","fulldoi":"https://doi.org/10.15479/AT:ISTA:19885","oa":1,"acknowledgement":"The authors would like to thank Barnaby van Straaten, Jonas Schuff, Daniel Jirovec and Hanifa Tidjani for fruitful discussions. This research was supported by the Scientific Service Units of ISTA through resources provided by the MIBA Machine Shop and the Nanofabrication Facility. G.K. acknowledges support from the NOMIS Foundation, the HORIZON-RIA (project no. 101069515) and the FWF Projects (DOIs: 10.55776/F86 and 10.55776/I5060). N.A. acknowledges support from the European Research Council (grant agreement 948932), and the Royal Society (grant no. URF/R1/191150). This project received support from the US Army Research Office (ARO) under Award No. W911NF-24-2-0043. C.C. acknowledges support from the UKRI Doctoral Training Partnership related to EP/W524311/1 (project ref. 2887634).","citation":{"ama":"Saez Mollejo J. Automated All-RF Tuning for Spin Qubit Readout and Control. 2025. doi:<a href=\"https://doi.org/10.15479/AT:ISTA:19885\">10.15479/AT:ISTA:19885</a>","mla":"Saez Mollejo, Jaime. <i>Automated All-RF Tuning for Spin Qubit Readout and Control</i>. Institute of Science and Technology Austria, 2025, doi:<a href=\"https://doi.org/10.15479/AT:ISTA:19885\">10.15479/AT:ISTA:19885</a>.","chicago":"Saez Mollejo, Jaime. “Automated All-RF Tuning for Spin Qubit Readout and Control.” Institute of Science and Technology Austria, 2025. <a href=\"https://doi.org/10.15479/AT:ISTA:19885\">https://doi.org/10.15479/AT:ISTA:19885</a>.","short":"J. Saez Mollejo, (2025).","ista":"Saez Mollejo J. 2025. Automated All-RF Tuning for Spin Qubit Readout and Control, Institute of Science and Technology Austria, <a href=\"https://doi.org/10.15479/AT:ISTA:19885\">10.15479/AT:ISTA:19885</a>.","apa":"Saez Mollejo, J. (2025). Automated All-RF Tuning for Spin Qubit Readout and Control. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT:ISTA:19885\">https://doi.org/10.15479/AT:ISTA:19885</a>","ieee":"J. Saez Mollejo, “Automated All-RF Tuning for Spin Qubit Readout and Control.” Institute of Science and Technology Austria, 2025."},"project":[{"name":"Integrated Germanium Quantum Technology","grant_number":"101069515","_id":"34c0acea-11ca-11ed-8bc3-8775e10fd452"},{"_id":"c0977eea-5a5b-11eb-8a69-a862db0cf4d1","name":"High impedance circuit quantum electrodynamics with hole spins","grant_number":"I05060"},{"name":"Center for Correlated Quantum Materials and Solid State Quantum Systems: Conventional  and unconventional topological superconductors","grant_number":"F8606","_id":"34a66131-11ca-11ed-8bc3-a31681c6b03e"}],"date_published":"2025-06-01T00:00:00Z","department":[{"_id":"GradSch"},{"_id":"GeKa"}],"month":"06","doi":"10.15479/AT:ISTA:19885","status":"public","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"has_accepted_license":"1","date_updated":"2025-07-01T07:19:26Z","article_processing_charge":"No","title":"Automated All-RF Tuning for Spin Qubit Readout and Control","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","file_date_updated":"2025-06-25T07:11:52Z","_id":"19885","author":[{"id":"e0390f72-f6e0-11ea-865d-862393336714","full_name":"Saez Mollejo, Jaime","last_name":"Saez Mollejo","first_name":"Jaime"}],"ddc":["530"]},{"degree_awarded":"PhD","OA_place":"publisher","abstract":[{"lang":"eng","text":"Immune responses depend on the coordinated and efficient migration of leukocytes. These\r\ncells, which are embedded and tightly confined within tissues, must navigate and traverse\r\ndiverse and complex three-dimensional environments. Leukocytes adapt their locomotory\r\nbehavior to the mechanical, geometrical, and biochemical characteristics of their\r\nsurroundings. In low-density environments, where the pore size of the interstitial matrix\r\nallows free passage, these cells position the nucleus directly behind the lamellipodium, the\r\nprotrusive actin structure that forms the leading front of the cell. In this configuration, they\r\nuse the nucleus as a gauge to identify the path of least resistance.\r\nHere, we show that in high-density environments, where the pore size precludes free passage\r\nof the cell body, leukocytes reposition the microtubule-organizing center (MTOC) and\r\nassociated organelles in front of the nucleus. In this configuration, they use actin structures\r\nprotruding orthogonally to the direction of migration in order to open a path for the cell body.\r\nWe identify two distinct actin populations that serve this purpose at different subcellular\r\nlocalizations. At the leading edge, local indentation of the plasma membrane leads to\r\nrecruitment of the Wiskott-Aldrich syndrome protein (WASp), which, via Arp2/3, results in\r\nthe formation of individual actin foci. At the cell body, actin polymerization is triggered by\r\nDOCK8, a Cdc42 exchange factor, resulting in the formation of a central actin pool.\r\nWe demonstrate that the central and peripheral actin pools are functionally communicating\r\nand that depletion of the central actin pool leads to increased actin accumulation at the cell\r\nfront, resulting in excessive extension of the leading edge."}],"page":"114","publisher":"Institute of Science and Technology Austria","language":[{"iso":"eng"}],"publication_identifier":{"issn":["2663-337X"]},"file":[{"content_type":"application/pdf","file_name":"2025_ReisRodrigues_Patricia_Thesis.pdf","file_size":63885565,"access_level":"open_access","relation":"main_file","date_updated":"2025-08-27T12:59:10Z","date_created":"2025-08-27T12:59:10Z","success":1,"creator":"prodrigu","checksum":"fda8a1070667c3562263f4867609b41b","file_id":"20232"},{"date_created":"2025-08-27T13:00:30Z","date_updated":"2025-08-27T13:02:28Z","relation":"source_file","access_level":"closed","creator":"prodrigu","file_id":"20233","checksum":"e8b65affcbce846a926454df4b2867b9","file_size":50483434,"file_name":"2025_ReisRodrigues_Patricia_Thesis.docx","content_type":"application/vnd.openxmlformats-officedocument.wordprocessingml.document"}],"day":"08","acknowledged_ssus":[{"_id":"Bio"},{"_id":"LifeSc"},{"_id":"M-Shop"},{"_id":"NanoFab"}],"corr_author":"1","year":"2025","date_created":"2025-08-08T09:18:02Z","oa":1,"fulldoi":"https://doi.org/10.15479/AT-ISTA-20149","type":"dissertation","oa_version":"Published Version","publication_status":"published","citation":{"apa":"Dos Reis Rodrigues, P. (2025). <i>Coordination of protrusive forces in immune cell migration </i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT-ISTA-20149\">https://doi.org/10.15479/AT-ISTA-20149</a>","ista":"Dos Reis Rodrigues P. 2025. Coordination of protrusive forces in immune cell migration . Institute of Science and Technology Austria.","ieee":"P. Dos Reis Rodrigues, “Coordination of protrusive forces in immune cell migration ,” Institute of Science and Technology Austria, 2025.","short":"P. Dos Reis Rodrigues, Coordination of Protrusive Forces in Immune Cell Migration , Institute of Science and Technology Austria, 2025.","chicago":"Dos Reis Rodrigues, Patricia. “Coordination of Protrusive Forces in Immune Cell Migration .” Institute of Science and Technology Austria, 2025. <a href=\"https://doi.org/10.15479/AT-ISTA-20149\">https://doi.org/10.15479/AT-ISTA-20149</a>.","ama":"Dos Reis Rodrigues P. Coordination of protrusive forces in immune cell migration . 2025. doi:<a href=\"https://doi.org/10.15479/AT-ISTA-20149\">10.15479/AT-ISTA-20149</a>","mla":"Dos Reis Rodrigues, Patricia. <i>Coordination of Protrusive Forces in Immune Cell Migration </i>. Institute of Science and Technology Austria, 2025, doi:<a href=\"https://doi.org/10.15479/AT-ISTA-20149\">10.15479/AT-ISTA-20149</a>."},"acknowledgement":"I would like to acknowledge the\r\nfinancial support of the European Research Council through the ERC-SyG grant “Pushing from\r\nwithin: Control of cell shape, integrity and motility by cytoskeletal pushing forces”\r\n(01071793), which made this research possible. ","project":[{"name":"Pushing from within: Control of cell shape, integrity and motility by cytoskeletal pushing forces","grant_number":"101071793","_id":"bd91e723-d553-11ed-ba76-fe7eeb2185fd"}],"supervisor":[{"last_name":"Sixt","first_name":"Michael K","id":"41E9FBEA-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-6620-9179","full_name":"Sixt, Michael K"}],"alternative_title":["ISTA Thesis"],"department":[{"_id":"GradSch"},{"_id":"MiSi"}],"date_published":"2025-08-08T00:00:00Z","month":"08","status":"public","doi":"10.15479/AT-ISTA-20149","title":"Coordination of protrusive forces in immune cell migration ","article_processing_charge":"No","date_updated":"2026-04-28T13:26:50Z","has_accepted_license":"1","tmp":{"name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","image":"/images/cc_by_nc_nd.png","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","short":"CC BY-NC-ND (4.0)"},"file_date_updated":"2025-08-27T13:02:28Z","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","related_material":{"record":[{"status":"public","id":"10703","relation":"part_of_dissertation"},{"status":"public","id":"20082","relation":"part_of_dissertation"}]},"_id":"20149","author":[{"first_name":"Patricia","last_name":"Dos Reis Rodrigues","orcid":"0000-0003-1681-508X","full_name":"Dos Reis Rodrigues, Patricia","id":"26E95904-5160-11E9-9C0B-C5B0DC97E90F"}],"ddc":["570"]},{"year":"2025","day":"02","DOAJ_listed":"1","publication_identifier":{"eissn":["2399-3642"]},"language":[{"iso":"eng"}],"publisher":"Springer Nature","article_number":"1148","abstract":[{"text":"Specialized DNA polymerases facilitate various cellular processes. Despite extensive research, the mutagenic effects of these error-prone enzymes on genomes are not fully understood. Here we show that Pol IV promotes genomic instability in Pseudomonas aeruginosa by misincorporating oxidized guanine nucleotides. This activity led to a distinctive mutational signature, characterized by A-to-C transversions occurring preferentially at AT sites flanked by a 5’G and/or 3’C. Furthermore, Pol IV preferentially targeted pathogenicity genes located at specific chromosomal locations near the replication termination region and rRNA-encoding operons. Half of the mutation events catalyzed by Pol IV impaired gene function. This can be attributed to the bias of Pol IV for mutating codons with its preferred sequence contexts, leading to substitutions to unreactive alanine and glycine residues. Remarkably, mutation signatures identified for Pol IV were found in clinical isolate genomes of P. aeruginosa, providing compelling evidence for its role in genetic diversification during pathogen adaptation.","lang":"eng"}],"OA_place":"publisher","main_file_link":[{"url":"https://doi.org/10.1038/s42003-025-08589-5","open_access":"1"}],"acknowledgement":"This work was supported by the Secretaría de Ciencia y Técnica (33620230100926CB), Universidad Nacional de Córdoba; and the Agencia Nacional de Promoción Científica y Técnica (PICT 2018-4527).\r\n\r\n","citation":{"chicago":"Castell, Sofía D., Consuelo M. Fernandez, Ignacio N. Tumas, Lucía M. Margara, Maria C Miserendino, Danilo G. Ceschin, Roberto J. Pezza, and Mariela R. Monti. “The Low-Fidelity DNA Pol IV Accelerates Evolution of Pathogenicity Genes in Pseudomonas Aeruginosa.” <i>Communications Biology</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1038/s42003-025-08589-5\">https://doi.org/10.1038/s42003-025-08589-5</a>.","short":"S.D. Castell, C.M. Fernandez, I.N. Tumas, L.M. Margara, M.C. Miserendino, D.G. Ceschin, R.J. Pezza, M.R. Monti, Communications Biology 8 (2025).","mla":"Castell, Sofía D., et al. “The Low-Fidelity DNA Pol IV Accelerates Evolution of Pathogenicity Genes in Pseudomonas Aeruginosa.” <i>Communications Biology</i>, vol. 8, 1148, Springer Nature, 2025, doi:<a href=\"https://doi.org/10.1038/s42003-025-08589-5\">10.1038/s42003-025-08589-5</a>.","ama":"Castell SD, Fernandez CM, Tumas IN, et al. The low-fidelity DNA Pol IV accelerates evolution of pathogenicity genes in Pseudomonas aeruginosa. <i>Communications Biology</i>. 2025;8. doi:<a href=\"https://doi.org/10.1038/s42003-025-08589-5\">10.1038/s42003-025-08589-5</a>","ieee":"S. D. Castell <i>et al.</i>, “The low-fidelity DNA Pol IV accelerates evolution of pathogenicity genes in Pseudomonas aeruginosa,” <i>Communications Biology</i>, vol. 8. Springer Nature, 2025.","ista":"Castell SD, Fernandez CM, Tumas IN, Margara LM, Miserendino MC, Ceschin DG, Pezza RJ, Monti MR. 2025. The low-fidelity DNA Pol IV accelerates evolution of pathogenicity genes in Pseudomonas aeruginosa. Communications Biology. 8, 1148.","apa":"Castell, S. D., Fernandez, C. M., Tumas, I. N., Margara, L. M., Miserendino, M. C., Ceschin, D. G., … Monti, M. R. (2025). The low-fidelity DNA Pol IV accelerates evolution of pathogenicity genes in Pseudomonas aeruginosa. <i>Communications Biology</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s42003-025-08589-5\">https://doi.org/10.1038/s42003-025-08589-5</a>"},"pmid":1,"publication_status":"published","oa_version":"Published Version","type":"journal_article","fulldoi":"https://doi.org/10.1038/s42003-025-08589-5","intvolume":"         8","oa":1,"date_created":"2025-08-17T22:01:35Z","doi":"10.1038/s42003-025-08589-5","status":"public","quality_controlled":"1","month":"08","publication":"Communications Biology","date_published":"2025-08-02T00:00:00Z","article_type":"original","department":[{"_id":"PaSc"},{"_id":"GradSch"}],"PlanS_conform":"1","author":[{"last_name":"Castell","first_name":"Sofía D.","full_name":"Castell, Sofía D."},{"full_name":"Fernandez, Consuelo M.","first_name":"Consuelo M.","last_name":"Fernandez"},{"first_name":"Ignacio N.","last_name":"Tumas","full_name":"Tumas, Ignacio N."},{"full_name":"Margara, Lucía M.","first_name":"Lucía M.","last_name":"Margara"},{"full_name":"Miserendino, Maria C","id":"273e0cbd-72f0-11ef-b75a-f9f932e292fa","first_name":"Maria C","last_name":"Miserendino"},{"full_name":"Ceschin, Danilo G.","first_name":"Danilo G.","last_name":"Ceschin"},{"last_name":"Pezza","first_name":"Roberto J.","full_name":"Pezza, Roberto J."},{"full_name":"Monti, Mariela R.","last_name":"Monti","first_name":"Mariela R."}],"ddc":["570"],"isi":1,"OA_type":"gold","_id":"20184","scopus_import":"1","volume":8,"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","external_id":{"isi":["001541878500001"],"pmid":["40753298"]},"tmp":{"name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","image":"/images/cc_by_nc_nd.png","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","short":"CC BY-NC-ND (4.0)"},"has_accepted_license":"1","date_updated":"2025-09-30T14:18:46Z","article_processing_charge":"Yes","title":"The low-fidelity DNA Pol IV accelerates evolution of pathogenicity genes in Pseudomonas aeruginosa"}]