---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '14278'
abstract:
- lang: eng
  text: 'The Birkhoff conjecture says that the boundary of a strictly convex integrable
    billiard table is necessarily an ellipse. In this article, we consider a stronger
    notion of integrability, namely, integrability close to the boundary, and prove
    a local version of this conjecture: a small perturbation of almost every ellipse
    that preserves integrability near the boundary, is itself an ellipse. We apply
    this result to study local spectral uniqueness of ellipses using the connection
    between the wave trace of the Laplacian and the dynamics near the boundary and
    establish local uniqueness for almost all of them.'
acknowledgement: 'The author acknowledges the partial support of the European Research
  Council Grant #885707. He also thanks Vadim Kaloshin for proposing the idea of the
  project and greatly aiding the implementation. The author is also grateful to Hamid
  Hezari, Amir Vig, Steve Zelditch, Comlan E. Koudjinan, Corentin Fierobe, Ngo Nhok
  Tkhai Shon and Roman Sarapin for useful discussions. The author also acknowledges
  partial support of ISTern summer program. The project started in the summer of 2021,
  when the author was an intern at ISTA. Open access funding provided by Institute
  of Science and Technology (IST Austria).'
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Illya
  full_name: Koval, Illya
  id: 2eed1f3b-896a-11ed-bdf8-93c7c4bf159e
  last_name: Koval
citation:
  ama: Koval I. Local strong Birkhoff conjecture and local spectral rigidity of almost
    every ellipse. <i>Inventiones Mathematicae</i>. 2026;244:221-298. doi:<a href="https://doi.org/10.1007/s00222-025-01397-y">10.1007/s00222-025-01397-y</a>
  apa: Koval, I. (2026). Local strong Birkhoff conjecture and local spectral rigidity
    of almost every ellipse. <i>Inventiones Mathematicae</i>. Springer Nature. <a
    href="https://doi.org/10.1007/s00222-025-01397-y">https://doi.org/10.1007/s00222-025-01397-y</a>
  chicago: Koval, Illya. “Local Strong Birkhoff Conjecture and Local Spectral Rigidity
    of Almost Every Ellipse.” <i>Inventiones Mathematicae</i>. Springer Nature, 2026.
    <a href="https://doi.org/10.1007/s00222-025-01397-y">https://doi.org/10.1007/s00222-025-01397-y</a>.
  ieee: I. Koval, “Local strong Birkhoff conjecture and local spectral rigidity of
    almost every ellipse,” <i>Inventiones Mathematicae</i>, vol. 244. Springer Nature,
    pp. 221–298, 2026.
  ista: Koval I. 2026. Local strong Birkhoff conjecture and local spectral rigidity
    of almost every ellipse. Inventiones Mathematicae. 244, 221–298.
  mla: Koval, Illya. “Local Strong Birkhoff Conjecture and Local Spectral Rigidity
    of Almost Every Ellipse.” <i>Inventiones Mathematicae</i>, vol. 244, Springer
    Nature, 2026, pp. 221–98, doi:<a href="https://doi.org/10.1007/s00222-025-01397-y">10.1007/s00222-025-01397-y</a>.
  short: I. Koval, Inventiones Mathematicae 244 (2026) 221–298.
corr_author: '1'
das_tickbox: '0'
date_created: 2023-09-06T08:35:43Z
date_published: 2026-04-01T00:00:00Z
date_updated: 2026-07-23T10:58:59Z
day: '01'
ddc:
- '510'
department:
- _id: GradSch
- _id: VaKa
doi: 10.1007/s00222-025-01397-y
ec_funded: 1
external_id:
  arxiv:
  - '2111.12171'
file:
- access_level: open_access
  checksum: 487fa9113e1bbf32a6c70e6d1e8f63bc
  content_type: application/pdf
  creator: dernst
  date_created: 2026-07-23T10:55:24Z
  date_updated: 2026-07-23T10:55:24Z
  file_id: '22394'
  file_name: 2026_InventionesMath_Koval.pdf
  file_size: 2256345
  relation: main_file
  success: 1
file_date_updated: 2026-07-23T10:55:24Z
fulldoi: https://doi.org/10.1007/s00222-025-01397-y
has_accepted_license: '1'
intvolume: '       244'
language:
- iso: eng
mathsc:
- 37C83
- 35J05
- 37J70
- 74J25
month: '04'
oa: 1
oa_version: Published Version
page: 221-298
project:
- _id: 9B8B92DE-BA93-11EA-9121-9846C619BF3A
  call_identifier: H2020
  grant_number: '885707'
  name: Spectral rigidity and integrability for billiards and geodesic flows
publication: Inventiones Mathematicae
publication_identifier:
  eissn:
  - 1432-1297
  issn:
  - 0020-9910
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
researchdata_availability: no
scopus_import: '1'
status: public
supplementarymaterial: yes
title: Local strong Birkhoff conjecture and local spectral rigidity of almost every
  ellipse
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 244
year: '2026'
...
---
OA_place: repository
OA_type: green
_id: '21720'
abstract:
- lang: eng
  text: "We present an exact fully-dynamic minimum cut algorithm that runs in \U0001D45B\U0001D45C⁡(1)
    deterministic update time when the minimum cut size is at most 2Θ⁡(log3/4−\U0001D450⁡\U0001D45B)
    for any \U0001D450 >0, improving on the previous algorithm of Jin, Sun, and Thorup
    (SODA 2024) whose minimum cut size limit is (log⁡\U0001D45B)\U0001D45C⁡(1). Combined
    with graph sparsification, we obtain the first (1 +\U0001D716)-approximate fully-dynamic
    minimum cut algorithm on weighted graphs, for any \U0001D716 ≥2−Θ⁡(log3/4−\U0001D450⁡\U0001D45B),
    in \U0001D45B\U0001D45C⁡(1) randomized update time.\r\nOur main technical contribution
    is a deterministic local minimum cut algorithm, which replaces the randomized
    LocalKCut procedure from El-Hayek, Henzinger, and Li (SODA 2025)."
acknowledgement: Funded by the European union. Views and opinions expressed are however
  those of the author(s) only and do not necessarily reflect those of the European
  Union or the European Research Council Executive Agency. Neither the European Union
  nor the granting authority can be held responsible for them. This project has received
  funding from the European Research Council (ERC) under the European Union’s Horizon
  2020 research and innovation programme (MoDynStruct, No. 101019564) and the Austrian
  Science Fund (FWF) grant DOI 10.55776/I5982. For open access purposes, the author
  has applied a CC BY public copyright license to any author-accepted manuscript version
  arising from this submission.
article_processing_charge: No
arxiv: 1
author:
- first_name: Antoine
  full_name: El-Hayek, Antoine
  id: 888a098e-fcac-11ee-aff7-d347be57b725
  last_name: El-Hayek
  orcid: 0000-0003-4268-7368
- first_name: Monika H
  full_name: Henzinger, Monika H
  id: 540c9bbd-f2de-11ec-812d-d04a5be85630
  last_name: Henzinger
  orcid: 0000-0002-5008-6530
- first_name: Jason
  full_name: Li, Jason
  last_name: Li
citation:
  ama: 'El-Hayek A, Henzinger M, Li J. Deterministic and exact fully-dynamic minimum
    cut of superpolylogarithmic size in subpolynomial time. In: <i>Proceedings of
    the Annual ACM SIAM Symposium on Discrete Algorithms</i>. Vol 2026. Society for
    Industrial and Applied Mathematics; 2026:613-663. doi:<a href="https://doi.org/10.1137/1.9781611978971.25">10.1137/1.9781611978971.25</a>'
  apa: 'El-Hayek, A., Henzinger, M., &#38; Li, J. (2026). Deterministic and exact
    fully-dynamic minimum cut of superpolylogarithmic size in subpolynomial time.
    In <i>Proceedings of the Annual ACM SIAM Symposium on Discrete Algorithms</i>
    (Vol. 2026, pp. 613–663). Vancouver, Canada: Society for Industrial and Applied
    Mathematics. <a href="https://doi.org/10.1137/1.9781611978971.25">https://doi.org/10.1137/1.9781611978971.25</a>'
  chicago: El-Hayek, Antoine, Monika Henzinger, and Jason Li. “Deterministic and Exact
    Fully-Dynamic Minimum Cut of Superpolylogarithmic Size in Subpolynomial Time.”
    In <i>Proceedings of the Annual ACM SIAM Symposium on Discrete Algorithms</i>,
    2026:613–63. Society for Industrial and Applied Mathematics, 2026. <a href="https://doi.org/10.1137/1.9781611978971.25">https://doi.org/10.1137/1.9781611978971.25</a>.
  ieee: A. El-Hayek, M. Henzinger, and J. Li, “Deterministic and exact fully-dynamic
    minimum cut of superpolylogarithmic size in subpolynomial time,” in <i>Proceedings
    of the Annual ACM SIAM Symposium on Discrete Algorithms</i>, Vancouver, Canada,
    2026, vol. 2026, pp. 613–663.
  ista: 'El-Hayek A, Henzinger M, Li J. 2026. Deterministic and exact fully-dynamic
    minimum cut of superpolylogarithmic size in subpolynomial time. Proceedings of
    the Annual ACM SIAM Symposium on Discrete Algorithms. SODA: Symposium on Discrete
    Algorithms vol. 2026, 613–663.'
  mla: El-Hayek, Antoine, et al. “Deterministic and Exact Fully-Dynamic Minimum Cut
    of Superpolylogarithmic Size in Subpolynomial Time.” <i>Proceedings of the Annual
    ACM SIAM Symposium on Discrete Algorithms</i>, vol. 2026, Society for Industrial
    and Applied Mathematics, 2026, pp. 613–63, doi:<a href="https://doi.org/10.1137/1.9781611978971.25">10.1137/1.9781611978971.25</a>.
  short: A. El-Hayek, M. Henzinger, J. Li, in:, Proceedings of the Annual ACM SIAM
    Symposium on Discrete Algorithms, Society for Industrial and Applied Mathematics,
    2026, pp. 613–663.
conference:
  end_date: 2026-01-14
  location: Vancouver, Canada
  name: 'SODA: Symposium on Discrete Algorithms'
  start_date: 2026-01-11
date_created: 2026-04-12T22:01:51Z
date_published: 2026-01-07T00:00:00Z
date_updated: 2026-07-24T12:48:29Z
day: '07'
department:
- _id: MoHe
- _id: GradSch
doi: 10.1137/1.9781611978971.25
ec_funded: 1
external_id:
  arxiv:
  - '2512.13105'
fulldoi: https://doi.org/10.1137/1.9781611978971.25
intvolume: '      2026'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2512.13105
month: '01'
oa: 1
oa_version: Preprint
page: 613-663
project:
- _id: bd9ca328-d553-11ed-ba76-dc4f890cfe62
  call_identifier: H2020
  grant_number: '101019564'
  name: The design and evaluation of modern fully dynamic data structures
- _id: bda196b2-d553-11ed-ba76-8e8ee6c21103
  grant_number: I05982
  name: Static and Dynamic Hierarchical Graph Decompositions
publication: Proceedings of the Annual ACM SIAM Symposium on Discrete Algorithms
publication_identifier:
  eisbn:
  - '9781611978971'
  eissn:
  - 1557-9468
  issn:
  - 1071-9040
publication_status: published
publisher: Society for Industrial and Applied Mathematics
quality_controlled: '1'
related_material:
  record:
  - id: '22281'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: Deterministic and exact fully-dynamic minimum cut of superpolylogarithmic size
  in subpolynomial time
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 2026
year: '2026'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
PlanS_conform: '1'
_id: '22403'
abstract:
- lang: eng
  text: Linear phase‐contrast scanning transmission electron microscopy (STEM) techniques
    compatible with high‐throughput 4D‐STEM acquisition are widely used to enhance
    phase contrast in weakly scattering and beam‐sensitive materials. In these modalities,
    contrast transfer is often suppressed at low spatial frequencies, resulting in
    a characteristic contrast gap that limits contrast. Approaches that retain low‐frequency
    phase contrast exist but typically require substantially increased experimental
    complexity, restricting routine use. Dark‐field STEM imaging captures this missing
    low‐frequency information through electrons scattered outside the bright‐field
    disk, but discards a large fraction of the scattered signal and is therefore dose‐inefficient.
    Fused Full‐field STEM (FF‐STEM) is introduced as a 4D‐STEM imaging modality that
    overcomes these limitations by combining ptychographic phase reconstruction with
    tilt‐corrected dark‐field imaging within a single acquisition. Bright‐field data
    are used to estimate probe aberrations and reconstruct a high‐resolution phase
    image, while dark‐field data provide complementary low‐frequency contrast. The
    two channels are fused in Fourier space using Wiener‐band weighting based on the
    spectral signal‐to‐noise ratio, yielding transfer‐gap‐free images with high contrast.
    FF‐STEM preserves the upsampling and depth‐sectioning capabilities of ptychography,
    adds robust low‐frequency contrast characteristic of dark‐field imaging, and enables
    dose‐efficient, near–real‐time reconstruction.
acknowledgement: 'We thank Tadahiro Yokosawa for support and discussions during the
  experiments. This project has received funding from the European Research Council
  (ERC) under the European Union''s Horizon 2020 research and innovation programme
  (Project HyperScaleEM, Grant agreement No. 101164581) and from the Deutsche Forschungsgemeinschaft
  (DFG, German Research Foundation) through the Research Training Group GRK 3103 CorMic:
  Korrelative Materialmikroskopie – Von nanostrukturierten funktionalen Filmen zu
  hierarchischen Funktionsmaterialien (project number 537140136). B.Z. and X.Y. were
  supported by the U.S. National Science Foundation under award CHE-2404338. X.Y.
  also thanks the Principal Investigator Development in Sustainability Grant from
  the American Chemical Society.'
article_number: e76620
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Shengbo
  full_name: You, Shengbo
  last_name: You
- first_name: Georgios
  full_name: Varnavides, Georgios
  last_name: Varnavides
- first_name: Sagar
  full_name: Khavnekar, Sagar
  last_name: Khavnekar
- first_name: Nikita
  full_name: Palatkin, Nikita
  last_name: Palatkin
- first_name: Sihan
  full_name: Shao, Sihan
  last_name: Shao
- first_name: Mingjian
  full_name: Wu, Mingjian
  last_name: Wu
- first_name: Daniel
  full_name: Stroppa, Daniel
  last_name: Stroppa
- first_name: Darya
  full_name: Chernikova, Darya
  id: 7dbaf460-fa9e-11eb-b0ca-bc7c7ff21ad0
  last_name: Chernikova
- first_name: Baixu
  full_name: Zhu, Baixu
  last_name: Zhu
- first_name: Ricardo
  full_name: Egoavil, Ricardo
  last_name: Egoavil
- first_name: Stefano
  full_name: Vespucci, Stefano
  last_name: Vespucci
- first_name: Dileep
  full_name: Krishnan, Dileep
  last_name: Krishnan
- first_name: Xingchen
  full_name: Ye, Xingchen
  last_name: Ye
- first_name: Florian KM
  full_name: Schur, Florian KM
  id: 48AD8942-F248-11E8-B48F-1D18A9856A87
  last_name: Schur
  orcid: 0000-0003-4790-8078
- first_name: Erdmann
  full_name: Spiecker, Erdmann
  last_name: Spiecker
- first_name: Philipp
  full_name: Pelz, Philipp
  last_name: Pelz
citation:
  ama: You S, Varnavides G, Khavnekar S, et al. Gap‐free information transfer in 4D‐STEM
    via fusion of complementary scattering channels. <i>Advanced Science</i>. 2026.
    doi:<a href="https://doi.org/10.1002/advs.76620">10.1002/advs.76620</a>
  apa: You, S., Varnavides, G., Khavnekar, S., Palatkin, N., Shao, S., Wu, M., … Pelz,
    P. (2026). Gap‐free information transfer in 4D‐STEM via fusion of complementary
    scattering channels. <i>Advanced Science</i>. Wiley. <a href="https://doi.org/10.1002/advs.76620">https://doi.org/10.1002/advs.76620</a>
  chicago: You, Shengbo, Georgios Varnavides, Sagar Khavnekar, Nikita Palatkin, Sihan
    Shao, Mingjian Wu, Daniel Stroppa, et al. “Gap‐free Information Transfer in 4D‐STEM
    via Fusion of Complementary Scattering Channels.” <i>Advanced Science</i>. Wiley,
    2026. <a href="https://doi.org/10.1002/advs.76620">https://doi.org/10.1002/advs.76620</a>.
  ieee: S. You <i>et al.</i>, “Gap‐free information transfer in 4D‐STEM via fusion
    of complementary scattering channels,” <i>Advanced Science</i>. Wiley, 2026.
  ista: You S, Varnavides G, Khavnekar S, Palatkin N, Shao S, Wu M, Stroppa D, Chernikova
    D, Zhu B, Egoavil R, Vespucci S, Krishnan D, Ye X, Schur FK, Spiecker E, Pelz
    P. 2026. Gap‐free information transfer in 4D‐STEM via fusion of complementary
    scattering channels. Advanced Science., e76620.
  mla: You, Shengbo, et al. “Gap‐free Information Transfer in 4D‐STEM via Fusion of
    Complementary Scattering Channels.” <i>Advanced Science</i>, e76620, Wiley, 2026,
    doi:<a href="https://doi.org/10.1002/advs.76620">10.1002/advs.76620</a>.
  short: S. You, G. Varnavides, S. Khavnekar, N. Palatkin, S. Shao, M. Wu, D. Stroppa,
    D. Chernikova, B. Zhu, R. Egoavil, S. Vespucci, D. Krishnan, X. Ye, F.K. Schur,
    E. Spiecker, P. Pelz, Advanced Science (2026).
das_tickbox: '1'
dataavailabilitystatement: The data that support the findings of this study are openly
  available in Zenodo at https://doi.org/10.5281/zenodo.18008901. The reconstruction
  code is available as an open-source repository at the scatterem github repo.
date_created: 2026-07-26T19:01:34Z
date_published: 2026-07-23T00:00:00Z
date_updated: 2026-07-27T06:04:57Z
day: '23'
ddc:
- '570'
- '600'
department:
- _id: FlSc
- _id: GradSch
doi: 10.1002/advs.76620
external_id:
  arxiv:
  - '2512.19460'
fulldoi: https://doi.org/10.1002/advs.76620
has_accepted_license: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1002/advs.76620
month: '07'
oa: 1
oa_version: Published Version
publication: Advanced Science
publication_identifier:
  eissn:
  - 2198-3844
publication_status: epub_ahead
publisher: Wiley
quality_controlled: '1'
researchdata_availability: yes
scopus_import: '1'
status: public
supplementarymaterial: yes
title: Gap‐free information transfer in 4D‐STEM via fusion of complementary scattering
  channels
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2026'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '21006'
abstract:
- lang: eng
  text: Modern experimental methods in programmable self-assembly make it possible
    to precisely design particle concentrations, shapes and interactions. However,
    more physical insight is needed before we can take full advantage of this vast
    design space to assemble nanostructures with complex form and function. Here we
    show how a substantial part of this design space can be quickly and comprehensively
    understood by identifying a class of thermodynamic constraints that act on it.
    These thermodynamic constraints form a high-dimensional convex polyhedron that
    determines which nanostructures can be assembled at high equilibrium yield and
    reveals limitations that govern the coexistence of structures. We validate our
    predictions through detailed, quantitative assembly experiments of nanoscale particles
    synthesized using DNA origami. Our results uncover physical relationships underpinning
    many-component programmable self-assembly in equilibrium and form the basis for
    robust inverse design, applicable to various systems from biological protein complexes
    to synthetic nanomachines.
acknowledgement: We thank B. Isaac and A. Tiano for their technical support with the
  electron microscopy and S. Waitukaitis for helpful comments on the manuscript. The
  TEM images were prepared and imaged at the Brandeis Electron Microscopy facility.
  This work was supported by the Gesellschaft für Forschungsförderung Niederösterreich
  under project FTI23-G-011 (M.C.H. and C.P.G.), the Brandeis University Materials
  Research Science and Engineering Center (MRSEC) under grant number NSF DMR-2011846
  (T.E.V., D.H. and W.B.R.) and the Smith Family Foundation (W.B.R.). Open access
  funding provided by Institute of Science and Technology (IST Austria).
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Maximilian
  full_name: Hübl, Maximilian
  id: 5eb8629e-15b2-11ec-abd3-e6f3e5e01f32
  last_name: Hübl
- first_name: Thomas E.
  full_name: Videbæk, Thomas E.
  last_name: Videbæk
- first_name: Daichi
  full_name: Hayakawa, Daichi
  last_name: Hayakawa
- first_name: W. Benjamin
  full_name: Rogers, W. Benjamin
  last_name: Rogers
- first_name: Carl Peter
  full_name: Goodrich, Carl Peter
  id: EB352CD2-F68A-11E9-89C5-A432E6697425
  last_name: Goodrich
  orcid: 0000-0002-1307-5074
citation:
  ama: Hübl M, Videbæk TE, Hayakawa D, Rogers WB, Goodrich CP. A polyhedral structure
    controls programmable self-assembly. <i>Nature Physics</i>. 2026;22:294-301. doi:<a
    href="https://doi.org/10.1038/s41567-025-03120-3">10.1038/s41567-025-03120-3</a>
  apa: Hübl, M., Videbæk, T. E., Hayakawa, D., Rogers, W. B., &#38; Goodrich, C. P.
    (2026). A polyhedral structure controls programmable self-assembly. <i>Nature
    Physics</i>. Springer Nature. <a href="https://doi.org/10.1038/s41567-025-03120-3">https://doi.org/10.1038/s41567-025-03120-3</a>
  chicago: Hübl, Maximilian, Thomas E. Videbæk, Daichi Hayakawa, W. Benjamin Rogers,
    and Carl Peter Goodrich. “A Polyhedral Structure Controls Programmable Self-Assembly.”
    <i>Nature Physics</i>. Springer Nature, 2026. <a href="https://doi.org/10.1038/s41567-025-03120-3">https://doi.org/10.1038/s41567-025-03120-3</a>.
  ieee: M. Hübl, T. E. Videbæk, D. Hayakawa, W. B. Rogers, and C. P. Goodrich, “A
    polyhedral structure controls programmable self-assembly,” <i>Nature Physics</i>,
    vol. 22. Springer Nature, pp. 294–301, 2026.
  ista: Hübl M, Videbæk TE, Hayakawa D, Rogers WB, Goodrich CP. 2026. A polyhedral
    structure controls programmable self-assembly. Nature Physics. 22, 294–301.
  mla: Hübl, Maximilian, et al. “A Polyhedral Structure Controls Programmable Self-Assembly.”
    <i>Nature Physics</i>, vol. 22, Springer Nature, 2026, pp. 294–301, doi:<a href="https://doi.org/10.1038/s41567-025-03120-3">10.1038/s41567-025-03120-3</a>.
  short: M. Hübl, T.E. Videbæk, D. Hayakawa, W.B. Rogers, C.P. Goodrich, Nature Physics
    22 (2026) 294–301.
corr_author: '1'
das_tickbox: '1'
dataavailabilitystatement: "Design files and folding conditions of DNA origami used
  in this work are provided in the repository Nanobase68 and are accessible at https://nanobase.org/structures/247.
  All the TEM images and associated experimental data are available via Zenodo at
  https://doi.org/10.5281/zenodo.17314727 (ref. 70).\r\nStructure enumeration was
  performed using the Roly.jl27,71 (v.0.1.0) package developed by M.C.H. and C.P.G.,
  which is available via GitHub at https://github.com/mxhbl/Roly.jl. Polyhedral computation
  and linear programming were performed using the freely available Convex.jl72 (v.0.16.4)
  package, Polyhedra.jl73 (v.0.7.8) package and cddlib63 (v.0.9.4) library. The example
  code reproducing the calculations done on the three rings and reconfigurable squares
  is available via GitHub at https://github.com/mxhbl/PolyhedralStructureOfSelfAssembly.
  An implementation of the lattice Monte Carlo sampler is available via GitHub at
  https://github.com/mxhbl/LatticeSampler. Fitting of the yield curves was achieved
  using the freely available Optim.jl74 (v.1.12.0) package."
date_created: 2026-01-20T10:02:19Z
date_published: 2026-02-01T00:00:00Z
date_updated: 2026-07-27T10:59:15Z
day: '01'
ddc:
- '570'
- '540'
department:
- _id: CaGo
- _id: GradSch
doi: 10.1038/s41567-025-03120-3
file:
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  date_created: 2026-07-27T10:57:57Z
  date_updated: 2026-07-27T10:57:57Z
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has_accepted_license: '1'
intvolume: '        22'
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
page: 294-301
project:
- _id: 8dd93da8-16d5-11f0-9cad-d2c70200d9a5
  grant_number: FTI23-G-011
  name: Dynamically reconfigurable self-assembly with triangular DNA-origami bricks
publication: Nature Physics
publication_identifier:
  eissn:
  - 1745-2481
  issn:
  - 1745-2473
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
  link:
  - description: News on ISTA website
    relation: press_release
    url: https://ista.ac.at/en/news/behind-natures-blueprints/
researchdata_availability: yes
scopus_import: '1'
status: public
supplementarymaterial: yes
title: A polyhedral structure controls programmable self-assembly
tmp:
  image: /images/cc_by.png
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  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 22
year: '2026'
...
---
OA_place: publisher
OA_type: hybrid
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_id: '21295'
abstract:
- lang: eng
  text: 'Depending on the type of flow, the transition to turbulence can take one
    of two forms: either turbulence arises from a sequence of instabilities or from
    the spatial proliferation of transiently chaotic domains, a process analogous
    to directed percolation. The former scenario is commonly referred to as a supercritical
    transition and frequently encountered in flows destabilized by body forces, whereas
    the latter subcritical transition is common in shear flows. Both cases are inherently
    continuous in a sense that the transformation from ordered laminar to fully turbulent
    fluid motion is only accomplished gradually with flow speed. Here we show that
    these established transition types do not account for the more general setting
    of shear flows subject to body forces. The combination of the two continuous scenarios
    leads to the attenuation of spatial coupling; with increasing forcing amplitude,
    the transition becomes increasingly sharp and eventually discontinuous. We argue
    that the suppression of laminar–turbulent coexistence and the approach towards
    a discontinuous phase transition potentially apply to a broad range of situations
    including flows subject to, for example, buoyancy, centrifugal or electromagnetic
    forces.'
acknowledgement: The work was supported by the Simons Foundation (grant number 662960,
  to B.H.). Open access funding provided by Institute of Science and Technology (IST
  Austria).
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Bowen
  full_name: Yang, Bowen
  id: 71b6ff4b-15b2-11ec-abd3-aef6b028cf7e
  last_name: Yang
  orcid: 0000-0002-4843-6853
- first_name: Yi
  full_name: Zhuang, Yi
  id: 3677B57C-F248-11E8-B48F-1D18A9856A87
  last_name: Zhuang
- first_name: Gökhan
  full_name: Yalniz, Gökhan
  id: 66E74FA2-D8BF-11E9-8249-8DE2E5697425
  last_name: Yalniz
  orcid: 0000-0002-8490-9312
- first_name: Mukund
  full_name: Vasudevan, Mukund
  id: 3C5A959A-F248-11E8-B48F-1D18A9856A87
  last_name: Vasudevan
- first_name: Elena
  full_name: Marensi, Elena
  id: 0BE7553A-1004-11EA-B805-18983DDC885E
  last_name: Marensi
  orcid: 0000-0001-7173-4923
- first_name: Björn
  full_name: Hof, Björn
  id: 3A374330-F248-11E8-B48F-1D18A9856A87
  last_name: Hof
  orcid: 0000-0003-2057-2754
citation:
  ama: Yang B, Zhuang Y, Yalniz G, Vasudevan M, Marensi E, Hof B. Discontinuous transition
    to shear flow turbulence. <i>Nature Physics</i>. 2026;22:424-429. doi:<a href="https://doi.org/10.1038/s41567-025-03166-3">10.1038/s41567-025-03166-3</a>
  apa: Yang, B., Zhuang, Y., Yalniz, G., Vasudevan, M., Marensi, E., &#38; Hof, B.
    (2026). Discontinuous transition to shear flow turbulence. <i>Nature Physics</i>.
    Springer Nature. <a href="https://doi.org/10.1038/s41567-025-03166-3">https://doi.org/10.1038/s41567-025-03166-3</a>
  chicago: Yang, Bowen, Yi Zhuang, Gökhan Yalniz, Mukund Vasudevan, Elena Marensi,
    and Björn Hof. “Discontinuous Transition to Shear Flow Turbulence.” <i>Nature
    Physics</i>. Springer Nature, 2026. <a href="https://doi.org/10.1038/s41567-025-03166-3">https://doi.org/10.1038/s41567-025-03166-3</a>.
  ieee: B. Yang, Y. Zhuang, G. Yalniz, M. Vasudevan, E. Marensi, and B. Hof, “Discontinuous
    transition to shear flow turbulence,” <i>Nature Physics</i>, vol. 22. Springer
    Nature, pp. 424–429, 2026.
  ista: Yang B, Zhuang Y, Yalniz G, Vasudevan M, Marensi E, Hof B. 2026. Discontinuous
    transition to shear flow turbulence. Nature Physics. 22, 424–429.
  mla: Yang, Bowen, et al. “Discontinuous Transition to Shear Flow Turbulence.” <i>Nature
    Physics</i>, vol. 22, Springer Nature, 2026, pp. 424–29, doi:<a href="https://doi.org/10.1038/s41567-025-03166-3">10.1038/s41567-025-03166-3</a>.
  short: B. Yang, Y. Zhuang, G. Yalniz, M. Vasudevan, E. Marensi, B. Hof, Nature Physics
    22 (2026) 424–429.
corr_author: '1'
das_tickbox: '1'
dataavailabilitystatement: Source data are available via Zenodo at https://doi.org/10.5281/zenodo.17514317
  (ref. 51). The numerical simulations were carried out using the open-source codes
  openpipeflow41 and nsPipeflow45.
date_created: 2026-02-17T11:38:41Z
date_published: 2026-03-01T00:00:00Z
date_updated: 2026-07-27T11:13:48Z
day: '01'
ddc:
- '532'
department:
- _id: GradSch
- _id: BjHo
doi: 10.1038/s41567-025-03166-3
external_id:
  arxiv:
  - '2311.11474'
file:
- access_level: open_access
  checksum: 0636abba74896c467a7237411fa2369b
  content_type: application/pdf
  creator: dernst
  date_created: 2026-07-27T11:12:46Z
  date_updated: 2026-07-27T11:12:46Z
  file_id: '22420'
  file_name: 2026_NaturePhysics_Yang.pdf
  file_size: 5152735
  relation: main_file
  success: 1
file_date_updated: 2026-07-27T11:12:46Z
fulldoi: https://doi.org/10.1038/s41567-025-03166-3
has_accepted_license: '1'
intvolume: '        22'
language:
- iso: eng
month: '03'
oa: 1
oa_version: Published Version
page: 424-429
project:
- _id: 238598C6-32DE-11EA-91FC-C7463DDC885E
  grant_number: '662960'
  name: Revisiting the Turbulence Problem Using Statistical Mechanics
publication: Nature Physics
publication_identifier:
  eissn:
  - 1745-2481
  issn:
  - 1745-2473
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
researchdata_availability: yes
scopus_import: '1'
status: public
supplementarymaterial: yes
title: Discontinuous transition to shear flow turbulence
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 22
year: '2026'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '21483'
abstract:
- lang: eng
  text: 'Embryogenesis in the model plant Arabidopsis thaliana provides a framework
    for understanding how cell polarity and patterning coordinate with hormonal signalling
    to establish the plant body plan. Following fertilisation, the zygote divides
    asymmetrically to generate apical and basal lineages, establishing the apical–basal
    axis that defines future shoot and root poles. Genetic and molecular analyses
    of classical mutants including gnom, monopteros (mp), bodenlos (bdl) and topless
    revealed that localised auxin biosynthesis, directional transport and downstream
    transcriptional responses are central to apical–basal axis establishment and organ
    initiation. The main components of this regulation are polarly localised PIN auxin
    transporters and downstream modules involving MONOPTEROS and WUSCHEL-RELATED HOMEOBOX
    transcription factors. Advances in microscopy have transformed the study of Arabidopsis
    embryogenesis: fluorescence-compatible clearing reagents and three-dimensional
    reconstructions now permit quantitative analyses of cell geometry, division orientation,
    and cytoskeletal dynamics. Live ovule imaging setups with confocal laser scanning
    and multiphoton microscopes enable real-time observation of embryo development,
    while laser-assisted cell ablation can be used to probe cell-to-cell communication
    and fate plasticity. Together, these methodological breakthroughs position Arabidopsis
    embryos as a prime model for dissecting the chemical and biophysical cues that
    shape plant development.'
acknowledgement: The authors would like to acknowledge the many colleagues whose valuable
  contributions to the field could not be included in this review due to space limitations
  and reference constraints. Open Access funding provided by Institute of Science
  and Technology Austria/KEMÖ.
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: David
  full_name: Babic, David
  id: db566d23-f6e0-11ea-865d-e6f270e968e7
  last_name: Babic
- first_name: Milan
  full_name: Zupunski, Milan
  id: f6a21fce-573e-11f0-a150-a8d96aee2539
  last_name: Zupunski
- first_name: Jiří
  full_name: Friml, Jiří
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
citation:
  ama: Babic D, Zupunski M, Friml J. Imaging and genetic toolbox to study Arabidopsis
    embryogenesis. <i>New Phytologist</i>. 2026;250(3):1483-1491. doi:<a href="https://doi.org/10.1111/nph.71072">10.1111/nph.71072</a>
  apa: Babic, D., Zupunski, M., &#38; Friml, J. (2026). Imaging and genetic toolbox
    to study Arabidopsis embryogenesis. <i>New Phytologist</i>. Wiley. <a href="https://doi.org/10.1111/nph.71072">https://doi.org/10.1111/nph.71072</a>
  chicago: Babic, David, Milan Zupunski, and Jiří Friml. “Imaging and Genetic Toolbox
    to Study Arabidopsis Embryogenesis.” <i>New Phytologist</i>. Wiley, 2026. <a href="https://doi.org/10.1111/nph.71072">https://doi.org/10.1111/nph.71072</a>.
  ieee: D. Babic, M. Zupunski, and J. Friml, “Imaging and genetic toolbox to study
    Arabidopsis embryogenesis,” <i>New Phytologist</i>, vol. 250, no. 3. Wiley, pp.
    1483–1491, 2026.
  ista: Babic D, Zupunski M, Friml J. 2026. Imaging and genetic toolbox to study Arabidopsis
    embryogenesis. New Phytologist. 250(3), 1483–1491.
  mla: Babic, David, et al. “Imaging and Genetic Toolbox to Study Arabidopsis Embryogenesis.”
    <i>New Phytologist</i>, vol. 250, no. 3, Wiley, 2026, pp. 1483–91, doi:<a href="https://doi.org/10.1111/nph.71072">10.1111/nph.71072</a>.
  short: D. Babic, M. Zupunski, J. Friml, New Phytologist 250 (2026) 1483–1491.
corr_author: '1'
das_tickbox: '0'
date_created: 2026-03-23T14:59:06Z
date_published: 2026-05-01T00:00:00Z
date_updated: 2026-07-27T11:47:24Z
day: '01'
ddc:
- '580'
department:
- _id: JiFr
- _id: GradSch
doi: 10.1111/nph.71072
external_id:
  pmid:
  - '41808651'
file:
- access_level: open_access
  checksum: 67513dde983631bed9613fdaadbbee06
  content_type: application/pdf
  creator: dernst
  date_created: 2026-07-27T11:46:25Z
  date_updated: 2026-07-27T11:46:25Z
  file_id: '22424'
  file_name: 2026_NewPhytologist_Babic.pdf
  file_size: 1708392
  relation: main_file
  success: 1
file_date_updated: 2026-07-27T11:46:25Z
fulldoi: https://doi.org/10.1111/nph.71072
has_accepted_license: '1'
intvolume: '       250'
issue: '3'
language:
- iso: eng
month: '05'
oa: 1
oa_version: Published Version
page: 1483-1491
pmid: 1
publication: New Phytologist
publication_identifier:
  eissn:
  - 1469-8137
  issn:
  - 0028-646X
publication_status: published
publisher: Wiley
quality_controlled: '1'
researchdata_availability: no
scopus_import: '1'
status: public
supplementarymaterial: no
title: Imaging and genetic toolbox to study Arabidopsis embryogenesis
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 250
year: '2026'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
_id: '21486'
abstract:
- lang: eng
  text: Sex-chromosome systems are highly variable across animals, but how they transition
    from one to another is not well understood. Diptera have undergone multiple sex-chromosome
    turnovers and expansions while maintaining their general chromosomal content,
    which makes them an ideal clade to study such transitions. We analyzed more than
    100 dipteran whole-genome assemblies and identified 4 new lineages that underwent
    sex-chromosome turnover (in addition to the 5 previously reported). We find that
    the majority of turnovers happened in the group Schizophora, which tend to have
    fewer genes on Muller element F (the chromosome homologous to the ancestral insect
    X chromosome) than lower dipterans, a factor previously hypothesized to facilitate
    turnover. Most derived X chromosomes have higher GC content than autosomes, consistent
    with a high prevalence of male achiasmy in Diptera. In addition, an excess of
    gene movement out of the X is detected for most of these new X chromosomes, and
    many of these moved genes have high testis expression in Drosophila, suggesting
    that out-of-X gene movement contributes to the long-term demasculinization of
    X chromosomes.
acknowledged_ssus:
- _id: ScienComp
acknowledgement: This work was supported by a grant from the Austrian Science Fund
  (FWF, grant number PAT 8748323) to B.V. We thank the Vicoso group for their feedback
  on an early version of the manuscript. We are grateful to Kamil Jaron and Julia
  Gries for helpful discussions and for sharing their unpublished work. Computational
  resources and support were provided by the Scientific Computing Unit at ISTA.
article_number: qrag003
article_processing_charge: Yes
article_type: original
author:
- first_name: Lorena Alexandra
  full_name: Layana Franco, Lorena Alexandra
  id: 02814589-eb8f-11eb-b029-a70074f3f18f
  last_name: Layana Franco
  orcid: 0000-0002-1253-6297
- first_name: Melissa A
  full_name: Toups, Melissa A
  id: 4E099E4E-F248-11E8-B48F-1D18A9856A87
  last_name: Toups
  orcid: 0000-0002-9752-7380
- first_name: Beatriz
  full_name: Vicoso, Beatriz
  id: 49E1C5C6-F248-11E8-B48F-1D18A9856A87
  last_name: Vicoso
  orcid: 0000-0002-4579-8306
citation:
  ama: Layana Franco LA, Toups MA, Vicoso B. Causes and consequences of sex-chromosome
    turnovers in Diptera. <i>Evolution Letters</i>. 2026;10(3). doi:<a href="https://doi.org/10.1093/evlett/qrag003">10.1093/evlett/qrag003</a>
  apa: Layana Franco, L. A., Toups, M. A., &#38; Vicoso, B. (2026). Causes and consequences
    of sex-chromosome turnovers in Diptera. <i>Evolution Letters</i>. Oxford University
    Press. <a href="https://doi.org/10.1093/evlett/qrag003">https://doi.org/10.1093/evlett/qrag003</a>
  chicago: Layana Franco, Lorena Alexandra, Melissa A Toups, and Beatriz Vicoso. “Causes
    and Consequences of Sex-Chromosome Turnovers in Diptera.” <i>Evolution Letters</i>.
    Oxford University Press, 2026. <a href="https://doi.org/10.1093/evlett/qrag003">https://doi.org/10.1093/evlett/qrag003</a>.
  ieee: L. A. Layana Franco, M. A. Toups, and B. Vicoso, “Causes and consequences
    of sex-chromosome turnovers in Diptera,” <i>Evolution Letters</i>, vol. 10, no.
    3. Oxford University Press, 2026.
  ista: Layana Franco LA, Toups MA, Vicoso B. 2026. Causes and consequences of sex-chromosome
    turnovers in Diptera. Evolution Letters. 10(3), qrag003.
  mla: Layana Franco, Lorena Alexandra, et al. “Causes and Consequences of Sex-Chromosome
    Turnovers in Diptera.” <i>Evolution Letters</i>, vol. 10, no. 3, qrag003, Oxford
    University Press, 2026, doi:<a href="https://doi.org/10.1093/evlett/qrag003">10.1093/evlett/qrag003</a>.
  short: L.A. Layana Franco, M.A. Toups, B. Vicoso, Evolution Letters 10 (2026).
corr_author: '1'
dataavailabilitystatement: Scripts, Supplementary Datasets 1–7, and Tables S1, S2,
  S5 and S6 are also available at https://doi.org/10.15479/AT-ISTA-21116. Pipelines
  are available at https://git.ista.ac.at/llayanaf/transitions_diptera.
date_created: 2026-03-23T15:05:42Z
date_published: 2026-06-01T00:00:00Z
date_updated: 2026-07-27T12:00:11Z
day: '01'
ddc:
- '570'
department:
- _id: BeVi
- _id: GradSch
doi: 10.1093/evlett/qrag003
file:
- access_level: open_access
  checksum: 7c929e78c369a5e6e064bcf263e955ad
  content_type: application/pdf
  creator: dernst
  date_created: 2026-07-27T11:59:40Z
  date_updated: 2026-07-27T11:59:40Z
  file_id: '22426'
  file_name: 2026_EvolutionLetters_Layana.pdf
  file_size: 1895786
  relation: main_file
  success: 1
file_date_updated: 2026-07-27T11:59:40Z
fulldoi: https://doi.org/10.1093/evlett/qrag003
has_accepted_license: '1'
intvolume: '        10'
issue: '3'
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
project:
- _id: 8ed82125-16d5-11f0-9cad-fbcae312235b
  grant_number: PAT 8748323
  name: Sex chromosomes in evolution and development
publication: Evolution Letters
publication_identifier:
  eissn:
  - 2056-3744
publication_status: published
publisher: Oxford University Press
quality_controlled: '1'
researchdata_availability: yes
status: public
supplementarymaterial: yes
title: Causes and consequences of sex-chromosome turnovers in Diptera
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
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  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 10
year: '2026'
...
---
OA_place: publisher
OA_type: green
_id: '21857'
abstract:
- lang: eng
  text: "The availability of powerful open-source large language models (LLMs) opens
    exciting use cases, such as using personal data to fine-tune these models to imitate
    a user’s unique writing style. Two key requirements for this functionality are
    personalization–in the sense that the output should recognizably reflect the user’s
    own writing style—and privacy–users may justifiably be wary of uploading extremely
    personal data, such as their email archive, to a third-party service. In this
    paper, we demonstrate the feasibility of training and running such an assistant,
    which we call Panza, on commodity hardware, for the specific use case of email
    generation. Panza’s personalization features are based on a combination of parameter-efficient
    fine-tuning using a variant of the Reverse Instructions technique [1] and Retrieval-Augmented
    Generation (RAG) [2]. We demonstrate that this combination allows us to fine-tune
    an LLM to reflect a user’s writing style using limited data, while executing on
    extremely limited resources, e.g. on a free Google Colab instance. Our key methodological
    contribution is the first detailed study of evaluation metrics for this task,
    and\r\nof how different choices of system components–the use of RAG and of different
    fine-tuning approaches–impact the system’s performance. Additionally, we demonstrate
    that very little data - under 100 email samples - are sufficient to create models
    that convincingly imitate humans, showcasing a previously unknown attack vector
    in language models. We are releasing the full Panza code as well as three new
    email datasets licensed for research use."
article_number: '81'
article_processing_charge: No
author:
- first_name: Armand
  full_name: Nicolicioiu, Armand
  last_name: Nicolicioiu
- first_name: Eugenia B
  full_name: Iofinova, Eugenia B
  id: f9a17499-f6e0-11ea-865d-fdf9a3f77117
  last_name: Iofinova
  orcid: 0000-0002-7778-3221
- first_name: Andrej
  full_name: Jovanovic, Andrej
  last_name: Jovanovic
- first_name: Eldar
  full_name: Kurtic, Eldar
  id: 47beb3a5-07b5-11eb-9b87-b108ec578218
  last_name: Kurtic
- first_name: Mahdi
  full_name: Nikdan, Mahdi
  id: 66374281-f394-11eb-9cf6-869147deecc0
  last_name: Nikdan
- first_name: Andrei
  full_name: Panferov, Andrei
  id: 2c18daae-4dbe-11ef-8491-98ce2d960f09
  last_name: Panferov
- first_name: Ilia
  full_name: Markov, Ilia
  id: D0CF4148-C985-11E9-8066-0BDEE5697425
  last_name: Markov
- first_name: Nir
  full_name: Shavit, Nir
  last_name: Shavit
- first_name: Dan-Adrian
  full_name: Alistarh, Dan-Adrian
  id: 4A899BFC-F248-11E8-B48F-1D18A9856A87
  last_name: Alistarh
  orcid: 0000-0003-3650-940X
citation:
  ama: 'Nicolicioiu A, Iofinova EB, Jovanovic A, et al. <i>Panza: Investigating the
    Feasibility of Fully-Local Personalized Text Generation</i>. OpenReview; 2026.'
  apa: 'Nicolicioiu, A., Iofinova, E. B., Jovanovic, A., Kurtic, E., Nikdan, M., Panferov,
    A., … Alistarh, D.-A. (2026). <i>Panza: Investigating the feasibility of fully-local
    personalized text generation</i>. <i>Third Conference on Parsimony and Learning
    (Proceedings Track)</i>. Tübíngen, Germany: OpenReview.'
  chicago: 'Nicolicioiu, Armand, Eugenia B Iofinova, Andrej Jovanovic, Eldar Kurtic,
    Mahdi Nikdan, Andrei Panferov, Ilia Markov, Nir Shavit, and Dan-Adrian Alistarh.
    <i>Panza: Investigating the Feasibility of Fully-Local Personalized Text Generation</i>.
    <i>Third Conference on Parsimony and Learning (Proceedings Track)</i>. OpenReview,
    2026.'
  ieee: 'A. Nicolicioiu <i>et al.</i>, <i>Panza: Investigating the feasibility of
    fully-local personalized text generation</i>. OpenReview, 2026.'
  ista: 'Nicolicioiu A, Iofinova EB, Jovanovic A, Kurtic E, Nikdan M, Panferov A,
    Markov I, Shavit N, Alistarh D-A. 2026. Panza: Investigating the feasibility of
    fully-local personalized text generation, OpenReview,p.'
  mla: 'Nicolicioiu, Armand, et al. “Panza: Investigating the Feasibility of Fully-Local
    Personalized Text Generation.” <i>Third Conference on Parsimony and Learning (Proceedings
    Track)</i>, 81, OpenReview, 2026.'
  short: 'A. Nicolicioiu, E.B. Iofinova, A. Jovanovic, E. Kurtic, M. Nikdan, A. Panferov,
    I. Markov, N. Shavit, D.-A. Alistarh, Panza: Investigating the Feasibility of
    Fully-Local Personalized Text Generation, OpenReview, 2026.'
conference:
  end_date: 2026-03-26
  location: Tübíngen, Germany
  name: 'CPAL: Conference on Parsimony and Learning'
  start_date: 2026-03-23
corr_author: '1'
date_created: 2026-05-11T08:50:28Z
date_published: 2026-03-06T00:00:00Z
date_updated: 2026-07-27T12:50:03Z
day: '06'
department:
- _id: GradSch
- _id: DaAl
keyword:
- LLMs
- PEFT
- LoRA
- personalization
- efficient ML
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://openreview.net/pdf?id=soFWnTqd23
month: '03'
oa: 1
oa_version: Accepted Version
publication: Third Conference on Parsimony and Learning (Proceedings Track)
publication_status: published
publisher: OpenReview
quality_controlled: '1'
related_material:
  record:
  - id: '21854'
    relation: dissertation_contains
    status: public
status: public
title: 'Panza: Investigating the feasibility of fully-local personalized text generation'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: conference_poster
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
year: '2026'
...
---
OA_place: repository
OA_type: green
_id: '21859'
abstract:
- lang: eng
  text: As artificial neural networks, and specifically large language models, have
    improved rapidly in capabilities and quality, they have increasingly been deployed
    in real-world applications, from customer service to Google search, despite the
    fact that they frequently make factually incorrect or undesirable statements.
    This trend has inspired practical and academic interest in model editing, that
    is, in adjusting the weights of the model to modify its likely outputs for queries
    relating to a specific fact or set of facts. This may be done either to amend
    a fact or set of facts, for instance, to fix a frequent error in the training
    data, or to suppress a fact or set of facts entirely, for instance, in case of
    dangerous knowledge. Multiple methods have been proposed to do such edits. However,
    at the same time, it has been shown that such model editing can be brittle and
    incomplete. Moreover the effectiveness of any model editing method necessarily
    depends on the data on which the model is trained, and, therefore, a good understanding
    of the interaction of the training data distribution and the way it is stored
    in the network is necessary and helpful to reliably perform model editing. However,
    working with large language models trained on real-world data does not allow us
    to understand this relationship or fully measure the effects of model editing.
    We therefore propose Behemoth, a fully synthetic data generation framework. To
    demonstrate the practical insights from the framework, we explore model editing
    in the context of simple tabular data, demonstrating surprising findings that,
    in some cases, echo real-world results, for instance, that in some cases restricting
    the update rank results in a more effective update.
acknowledged_ssus:
- _id: ScienComp
acknowledgement: "EI thanks Weiwei Yang, Janardhan Kulkani, and Kate Lytvynets for
  their advice and support in\r\ndeveloping an earlier version of the Behemoth library.
  This research was supported by the Scientific\r\nService Units (SSU) of IST Austria
  through resources provided by Scientific Computing (SciComp).\r\nEI was supported
  in part by the FWF DK VGSCO, grant agreement number W1260-N35.\r\n"
article_processing_charge: No
arxiv: 1
author:
- first_name: Eugenia B
  full_name: Iofinova, Eugenia B
  id: f9a17499-f6e0-11ea-865d-fdf9a3f77117
  last_name: Iofinova
  orcid: 0000-0002-7778-3221
- first_name: Dan-Adrian
  full_name: Alistarh, Dan-Adrian
  id: 4A899BFC-F248-11E8-B48F-1D18A9856A87
  last_name: Alistarh
  orcid: 0000-0003-3650-940X
citation:
  ama: 'Iofinova EB, Alistarh D-A. Behemoth: Benchmarking unlearning in LLMs using
    fully synthetic data. <i>arXiv</i>. doi:<a href="https://doi.org/10.48550/arXiv.2601.23153">10.48550/arXiv.2601.23153</a>'
  apa: 'Iofinova, E. B., &#38; Alistarh, D.-A. (n.d.). Behemoth: Benchmarking unlearning
    in LLMs using fully synthetic data. <i>arXiv</i>. <a href="https://doi.org/10.48550/arXiv.2601.23153">https://doi.org/10.48550/arXiv.2601.23153</a>'
  chicago: 'Iofinova, Eugenia B, and Dan-Adrian Alistarh. “Behemoth: Benchmarking
    Unlearning in LLMs Using Fully Synthetic Data.” <i>ArXiv</i>, n.d. <a href="https://doi.org/10.48550/arXiv.2601.23153">https://doi.org/10.48550/arXiv.2601.23153</a>.'
  ieee: 'E. B. Iofinova and D.-A. Alistarh, “Behemoth: Benchmarking unlearning in
    LLMs using fully synthetic data,” <i>arXiv</i>. .'
  ista: 'Iofinova EB, Alistarh D-A. Behemoth: Benchmarking unlearning in LLMs using
    fully synthetic data. arXiv, <a href="https://doi.org/10.48550/arXiv.2601.23153">10.48550/arXiv.2601.23153</a>.'
  mla: 'Iofinova, Eugenia B., and Dan-Adrian Alistarh. “Behemoth: Benchmarking Unlearning
    in LLMs Using Fully Synthetic Data.” <i>ArXiv</i>, doi:<a href="https://doi.org/10.48550/arXiv.2601.23153">10.48550/arXiv.2601.23153</a>.'
  short: E.B. Iofinova, D.-A. Alistarh, ArXiv (n.d.).
corr_author: '1'
date_created: 2026-05-11T08:58:07Z
date_published: 2026-01-30T00:00:00Z
date_updated: 2026-07-27T12:50:03Z
day: '30'
department:
- _id: GradSch
- _id: DaAl
doi: 10.48550/arXiv.2601.23153
external_id:
  arxiv:
  - '2601.23153'
fulldoi: https://doi.org/10.48550/arXiv.2601.23153
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2601.23153
month: '01'
oa: 1
oa_version: Preprint
project:
- _id: 9B9290DE-BA93-11EA-9121-9846C619BF3A
  grant_number: W1260-N35
  name: Vienna Graduate School on Computational Optimization
publication: arXiv
publication_status: draft
related_material:
  record:
  - id: '21854'
    relation: dissertation_contains
    status: public
status: public
title: 'Behemoth: Benchmarking unlearning in LLMs using fully synthetic data'
type: preprint
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
year: '2026'
...
---
OA_place: publisher
_id: '21957'
abstract:
- lang: eng
  text: "This thesis investigates algorithmic certification and approximation methods
    for degenerate semidefinite programs (SDPs) and the singular roots of polynomial
    systems. In the first part, we present a hybrid symbolic-numeric algorithm for
    certifying the feasibility of weakly feasible, degenerate SDPs. By reformulating
    linear matrix inequalities (LMIs) into a structured polynomial system via facial
    reduction and incidence varieties, we guarantee the existence of an isolated exact
    solution. This algebraic reduction enables the certification of maximum-rank numerical
    approximations using methods from algebraic geometry.\r\n\r\nIn the second part,
    we address the severe ill-conditioning and loss of quadratic convergence that
    plague standard path-tracking methods near isolated singular roots. To overcome
    this, we propose tracking algorithms that achieve superlinear convergence without
    the computational bloat characteristic of classical deflation techniques. By modeling
    the solution path as a generalized fractional Puiseux series, our approach combines
    an explicitly derived algebraic predictor with a localized hyperplane desingularization
    phase during the corrector step. Furthermore, we introduce a continuous path-limit
    method and an extension of the geometric sequence rule to directly extract exact
    fractional exponents. This bypasses traditional heuristic trial-and-error methods
    and explicitly accommodates sparse series expansions. Numerical experiments confirm
    that our method significantly reduces the cumulative number of matrix inversions
    while achieving high-accuracy root approximations, even for heavily degenerate
    systems exhibiting higher coranks."
acknowledgement: 'Funding: Vienna Graduate School on Computational Optimization (FWF),
  grant DOI: 10.55776/W1260.'
alternative_title:
- ISTA Thesis
article_processing_charge: No
author:
- first_name: Jeferson
  full_name: Zapata, Jeferson
  id: 00223538-AF8F-11E9-A4C7-F729E6697425
  last_name: Zapata
citation:
  ama: 'Zapata J. Overcoming degeneracy and singularity: Techniques for semidefinite
    programs and homotopy continuation endgames. 2026. doi:<a href="https://doi.org/10.15479/AT-ISTA-21957">10.15479/AT-ISTA-21957</a>'
  apa: 'Zapata, J. (2026). <i>Overcoming degeneracy and singularity: Techniques for
    semidefinite programs and homotopy continuation endgames</i>. Institute of Science
    and Technology Austria. <a href="https://doi.org/10.15479/AT-ISTA-21957">https://doi.org/10.15479/AT-ISTA-21957</a>'
  chicago: 'Zapata, Jeferson. “Overcoming Degeneracy and Singularity: Techniques for
    Semidefinite Programs and Homotopy Continuation Endgames.” Institute of Science
    and Technology Austria, 2026. <a href="https://doi.org/10.15479/AT-ISTA-21957">https://doi.org/10.15479/AT-ISTA-21957</a>.'
  ieee: 'J. Zapata, “Overcoming degeneracy and singularity: Techniques for semidefinite
    programs and homotopy continuation endgames,” Institute of Science and Technology
    Austria, 2026.'
  ista: 'Zapata J. 2026. Overcoming degeneracy and singularity: Techniques for semidefinite
    programs and homotopy continuation endgames. Institute of Science and Technology
    Austria.'
  mla: 'Zapata, Jeferson. <i>Overcoming Degeneracy and Singularity: Techniques for
    Semidefinite Programs and Homotopy Continuation Endgames</i>. Institute of Science
    and Technology Austria, 2026, doi:<a href="https://doi.org/10.15479/AT-ISTA-21957">10.15479/AT-ISTA-21957</a>.'
  short: 'J. Zapata, Overcoming Degeneracy and Singularity: Techniques for Semidefinite
    Programs and Homotopy Continuation Endgames, Institute of Science and Technology
    Austria, 2026.'
corr_author: '1'
das_tickbox: '1'
date_created: 2026-06-08T13:29:52Z
date_published: 2026-06-09T00:00:00Z
date_updated: 2026-07-27T14:30:42Z
day: '09'
ddc:
- '500'
degree_awarded: PhD
department:
- _id: GradSch
- _id: VlKo
doi: 10.15479/AT-ISTA-21957
doi_confirm: '1'
file:
- access_level: closed
  checksum: b11a959e99d3dcf61040282b5c837141
  content_type: application/zip
  creator: jzapata
  date_created: 2026-06-08T13:20:02Z
  date_updated: 2026-06-08T13:20:02Z
  file_id: '21958'
  file_name: istaustriathesis_JZapata.zip
  file_size: 40811933
  relation: source_file
- access_level: open_access
  checksum: edf1e5899b2e31505cd1aa3fe8bd4b7f
  content_type: application/pdf
  creator: jzapata
  date_created: 2026-06-10T13:33:25Z
  date_updated: 2026-06-10T13:33:25Z
  file_id: '21992'
  file_name: 4_Final_Thesis_JZapata_REX.pdf
  file_size: 2207892
  relation: main_file
  success: 1
file_date_updated: 2026-06-10T13:33:25Z
fulldoi: https://doi.org/10.15479/AT-ISTA-21957
has_accepted_license: '1'
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
page: '89'
project:
- _id: 9B9290DE-BA93-11EA-9121-9846C619BF3A
  grant_number: W1260-N35
  name: Vienna Graduate School on Computational Optimization
publication_identifier:
  isbn:
  - 978-3-99078-079-4
  issn:
  - 2663-337X
publication_status: published
publisher: Institute of Science and Technology Austria
related_material:
  record:
  - id: '21144'
    relation: part_of_dissertation
    status: public
status: public
supervisor:
- first_name: Vladimir
  full_name: Kolmogorov, Vladimir
  id: 3D50B0BA-F248-11E8-B48F-1D18A9856A87
  last_name: Kolmogorov
title: 'Overcoming degeneracy and singularity: Techniques for semidefinite programs
  and homotopy continuation endgames'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: dissertation
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
year: '2026'
...
---
OA_place: repository
_id: '21360'
acknowledged_ssus:
- _id: LifeSc
- _id: Bio
acknowledgement: "I would like to acknowledge the Austrian Academy of Sciences (ÖAW)
  and European\r\nResearch Executive Agency (REA) for funding my research (DOC ÖAW
  Fellowship\r\n26130, Horizon Europe BOLERO Project 101060393). "
alternative_title:
- ISTA Thesis
article_processing_charge: No
author:
- first_name: Stefan
  full_name: Riegler, Stefan
  id: FF6018E0-D806-11E9-8E43-0B14E6697425
  last_name: Riegler
  orcid: 0000-0003-3413-1343
citation:
  ama: 'Riegler S. Root system plasticity under nutrient limitation: Investigating
    hormonal and molecular drivers in Arabidopsis thaliana and Coffea  species. 2026.
    doi:<a href="https://doi.org/10.15479/AT-ISTA-21360">10.15479/AT-ISTA-21360</a>'
  apa: 'Riegler, S. (2026). <i>Root system plasticity under nutrient limitation: Investigating
    hormonal and molecular drivers in Arabidopsis thaliana and Coffea  species</i>.
    Institute of Science and Technology Austria. <a href="https://doi.org/10.15479/AT-ISTA-21360">https://doi.org/10.15479/AT-ISTA-21360</a>'
  chicago: 'Riegler, Stefan. “Root System Plasticity under Nutrient Limitation: Investigating
    Hormonal and Molecular Drivers in Arabidopsis Thaliana and Coffea  Species.” Institute
    of Science and Technology Austria, 2026. <a href="https://doi.org/10.15479/AT-ISTA-21360">https://doi.org/10.15479/AT-ISTA-21360</a>.'
  ieee: 'S. Riegler, “Root system plasticity under nutrient limitation: Investigating
    hormonal and molecular drivers in Arabidopsis thaliana and Coffea  species,” Institute
    of Science and Technology Austria, 2026.'
  ista: 'Riegler S. 2026. Root system plasticity under nutrient limitation: Investigating
    hormonal and molecular drivers in Arabidopsis thaliana and Coffea  species. Institute
    of Science and Technology Austria.'
  mla: 'Riegler, Stefan. <i>Root System Plasticity under Nutrient Limitation: Investigating
    Hormonal and Molecular Drivers in Arabidopsis Thaliana and Coffea  Species</i>.
    Institute of Science and Technology Austria, 2026, doi:<a href="https://doi.org/10.15479/AT-ISTA-21360">10.15479/AT-ISTA-21360</a>.'
  short: 'S. Riegler, Root System Plasticity under Nutrient Limitation: Investigating
    Hormonal and Molecular Drivers in Arabidopsis Thaliana and Coffea  Species, Institute
    of Science and Technology Austria, 2026.'
corr_author: '1'
das_tickbox: '1'
date_created: 2026-02-27T09:08:14Z
date_published: 2026-02-26T00:00:00Z
date_updated: 2026-07-27T14:30:08Z
day: '26'
ddc:
- '570'
- '575'
- '583'
degree_awarded: PhD
department:
- _id: GradSch
- _id: EvBe
doi: 10.15479/AT-ISTA-21360
doi_confirm: '1'
file:
- access_level: closed
  checksum: 2f1f44e8536c2538f94a440217452c9f
  content_type: application/x-zip-compressed
  creator: sriegler
  date_created: 2026-03-02T10:59:50Z
  date_updated: 2026-03-02T10:59:50Z
  file_id: '21386'
  file_name: 2026_Riegler_Stefan_Thesis.zip
  file_size: 31430022
  relation: source_file
- access_level: closed
  checksum: 2e8dc39640bc26ae5684c944c619719b
  content_type: application/pdf
  creator: sriegler
  date_created: 2026-03-02T10:59:49Z
  date_updated: 2026-03-02T10:59:49Z
  embargo: 2027-02-27
  embargo_to: open_access
  file_id: '21387'
  file_name: 2026_Riegler_Stefan_Thesis.pdf
  file_size: 11635090
  relation: main_file
file_date_updated: 2026-03-02T10:59:50Z
fulldoi: https://doi.org/10.15479/AT-ISTA-21360
has_accepted_license: '1'
language:
- iso: eng
month: '02'
oa_version: Published Version
page: '185'
project:
- _id: 34afa094-11ca-11ed-8bc3-a375845a59fb
  grant_number: '101060393'
  name: Breeding for coffee and cocoa root resilience in low input farming systems
    based on improved rootstocks
publication_identifier:
  issn:
  - 2663-337X
publication_status: published
publisher: Institute of Science and Technology Austria
related_material:
  record:
  - id: '21363'
    relation: research_data
    status: public
status: public
supervisor:
- first_name: Eva
  full_name: Benková, Eva
  id: 38F4F166-F248-11E8-B48F-1D18A9856A87
  last_name: Benková
  orcid: 0000-0002-8510-9739
title: 'Root system plasticity under nutrient limitation: Investigating hormonal and
  molecular drivers in Arabidopsis thaliana and Coffea  species'
tmp:
  image: /images/cc_by_sa.png
  legal_code_url: https://creativecommons.org/licenses/by-sa/4.0/legalcode
  name: Creative Commons Attribution-ShareAlike 4.0 International Public License (CC
    BY-SA 4.0)
  short: CC BY-SA (4.0)
type: dissertation
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
year: '2026'
...
---
_id: '21363'
abstract:
- lang: eng
  text: The data contains information on coffee differential gene expression as well
    as co-expression and trait correlations in two separate experiments. First, contrasting
    nitrogen supply, second, intra- and interspecific grafting.
article_processing_charge: No
author:
- first_name: Stefan
  full_name: Riegler, Stefan
  id: FF6018E0-D806-11E9-8E43-0B14E6697425
  last_name: Riegler
  orcid: 0000-0003-3413-1343
citation:
  ama: 'Riegler S. Thesis Data for Root System Plasticity under Nutrient Limitation:
    Investigating Hormonal and Molecular Drivers in Arabidopsis thaliana and Coffea 
    species. 2026. doi:<a href="https://doi.org/10.15479/AT-ISTA-21363">10.15479/AT-ISTA-21363</a>'
  apa: 'Riegler, S. (2026). Thesis Data for Root System Plasticity under Nutrient
    Limitation: Investigating Hormonal and Molecular Drivers in Arabidopsis thaliana
    and Coffea  species. Institute of Science and Technology Austria. <a href="https://doi.org/10.15479/AT-ISTA-21363">https://doi.org/10.15479/AT-ISTA-21363</a>'
  chicago: 'Riegler, Stefan. “Thesis Data for Root System Plasticity under Nutrient
    Limitation: Investigating Hormonal and Molecular Drivers in Arabidopsis Thaliana
    and Coffea  Species.” Institute of Science and Technology Austria, 2026. <a href="https://doi.org/10.15479/AT-ISTA-21363">https://doi.org/10.15479/AT-ISTA-21363</a>.'
  ieee: 'S. Riegler, “Thesis Data for Root System Plasticity under Nutrient Limitation:
    Investigating Hormonal and Molecular Drivers in Arabidopsis thaliana and Coffea 
    species.” Institute of Science and Technology Austria, 2026.'
  ista: 'Riegler S. 2026. Thesis Data for Root System Plasticity under Nutrient Limitation:
    Investigating Hormonal and Molecular Drivers in Arabidopsis thaliana and Coffea 
    species, Institute of Science and Technology Austria, <a href="https://doi.org/10.15479/AT-ISTA-21363">10.15479/AT-ISTA-21363</a>.'
  mla: 'Riegler, Stefan. <i>Thesis Data for Root System Plasticity under Nutrient
    Limitation: Investigating Hormonal and Molecular Drivers in Arabidopsis Thaliana
    and Coffea  Species</i>. Institute of Science and Technology Austria, 2026, doi:<a
    href="https://doi.org/10.15479/AT-ISTA-21363">10.15479/AT-ISTA-21363</a>.'
  short: S. Riegler, (2026).
contributor:
- contributor_type: supervisor
  first_name: Eva
  id: 38F4F166-F248-11E8-B48F-1D18A9856A87
  last_name: Benková
  orcid: 0000-0002-8510-9739
corr_author: '1'
date_created: 2026-02-27T09:18:41Z
date_published: 2026-02-27T00:00:00Z
date_updated: 2026-07-27T14:30:07Z
day: '27'
ddc:
- '575'
department:
- _id: GradSch
- _id: EvBe
doi: 10.15479/AT-ISTA-21363
file:
- access_level: closed
  checksum: de9145fa166a28c588b5184a2d3d4fee
  content_type: application/vnd.openxmlformats-officedocument.spreadsheetml.sheet
  creator: sriegler
  date_created: 2026-02-27T09:11:33Z
  date_updated: 2026-02-27T09:11:33Z
  embargo: 2027-02-27
  embargo_to: open_access
  file_id: '21364'
  file_name: SupplementaryTables.xlsx
  file_size: 63749444
  relation: main_file
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  checksum: ce1f163551c96cee45943a8ea29720b6
  content_type: text/plain
  creator: sriegler
  date_created: 2026-02-27T09:13:11Z
  date_updated: 2026-02-27T09:13:11Z
  embargo: 2027-02-27
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  file_id: '21365'
  file_name: ReadMe.txt
  file_size: 124
  relation: main_file
file_date_updated: 2026-02-27T09:13:11Z
fulldoi: https://doi.org/10.15479/AT-ISTA-21363
has_accepted_license: '1'
month: '02'
oa_version: Published Version
publisher: Institute of Science and Technology Austria
related_material:
  record:
  - id: '21360'
    relation: used_in_publication
    status: public
status: public
title: 'Thesis Data for Root System Plasticity under Nutrient Limitation: Investigating
  Hormonal and Molecular Drivers in Arabidopsis thaliana and Coffea  species'
tmp:
  image: /images/cc_by_sa.png
  legal_code_url: https://creativecommons.org/licenses/by-sa/4.0/legalcode
  name: Creative Commons Attribution-ShareAlike 4.0 International Public License (CC
    BY-SA 4.0)
  short: CC BY-SA (4.0)
type: research_data
user_id: 68b8ca59-c5b3-11ee-8790-cd641c68093d
year: '2026'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '21980'
abstract:
- lang: eng
  text: Despite significant progress in the field of molecular electronics over the
    last two decades, the quantitative prediction of metal-molecule-metal junction
    conductance remains a challenge. The standard computational framework combines
    density functional theory (DFT) with nonequilibrium Green’s functions (NEGF) using
    low-rung exchange-correlation functionals such as PBE, which overestimate the
    conductances. More advanced correction methods exist but require complex workflows
    and high computational cost, limiting their accessibility. Here, we introduce
    a physically motivated approach that approximates results obtained with high-rung
    functionals. Our method fits the PBE-calculated transmission to a Breit-Wigner
    form and subsequently refines the fit parameters using molecular orbital energies
    and metal densities of states computed for the isolated subsystems with high-rung
    functionals. This approach is applicable to a broad range of molecular junctions
    yielding conductance values in quantitative agreement with experiments. Our approach
    is simple, low-cost, and accurate, making it well-suited for routine and large-scale
    prediction of single-molecule junction conductance.
acknowledgement: This work was supported primarily by the Institute of Science and
  Technology Austria. L.V. was supported in part by the National Science Foundation
  (No. NSF-DMR 2241180). Z.-F.L. was supported by an NSF CAREER Award, No. DMR-2044552
  and an Alfred P. Sloan Research Fellowship, No. FG-2024-21750.
article_processing_charge: Yes (via OA deal)
article_type: letter_note
author:
- first_name: Artem
  full_name: Gulyaev, Artem
  id: 83ed7901-7380-11f0-bf20-a0788d5e654d
  last_name: Gulyaev
- first_name: Jyotisman
  full_name: Hazarika, Jyotisman
  id: d87714c4-663d-11f0-bd06-caece19833e5
  last_name: Hazarika
  orcid: 0009-0007-2542-7878
- first_name: Zhen-Fei
  full_name: Liu, Zhen-Fei
  last_name: Liu
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
chemrxivid: 1
citation:
  ama: Gulyaev A, Hazarika J, Liu Z-F, Venkataraman L. A computationally efficient
    and accurate method for predicting conductance of single-molecule junctions. <i>Nano
    Letters</i>. 2026;26(22):7429–7434. doi:<a href="https://doi.org/10.1021/acs.nanolett.6c01462">10.1021/acs.nanolett.6c01462</a>
  apa: Gulyaev, A., Hazarika, J., Liu, Z.-F., &#38; Venkataraman, L. (2026). A computationally
    efficient and accurate method for predicting conductance of single-molecule junctions.
    <i>Nano Letters</i>. American Chemical Society. <a href="https://doi.org/10.1021/acs.nanolett.6c01462">https://doi.org/10.1021/acs.nanolett.6c01462</a>
  chicago: Gulyaev, Artem, Jyotisman Hazarika, Zhen-Fei Liu, and Latha Venkataraman.
    “A Computationally Efficient and Accurate Method for Predicting Conductance of
    Single-Molecule Junctions.” <i>Nano Letters</i>. American Chemical Society, 2026.
    <a href="https://doi.org/10.1021/acs.nanolett.6c01462">https://doi.org/10.1021/acs.nanolett.6c01462</a>.
  ieee: A. Gulyaev, J. Hazarika, Z.-F. Liu, and L. Venkataraman, “A computationally
    efficient and accurate method for predicting conductance of single-molecule junctions,”
    <i>Nano Letters</i>, vol. 26, no. 22. American Chemical Society, pp. 7429–7434,
    2026.
  ista: Gulyaev A, Hazarika J, Liu Z-F, Venkataraman L. 2026. A computationally efficient
    and accurate method for predicting conductance of single-molecule junctions. Nano
    Letters. 26(22), 7429–7434.
  mla: Gulyaev, Artem, et al. “A Computationally Efficient and Accurate Method for
    Predicting Conductance of Single-Molecule Junctions.” <i>Nano Letters</i>, vol.
    26, no. 22, American Chemical Society, 2026, pp. 7429–7434, doi:<a href="https://doi.org/10.1021/acs.nanolett.6c01462">10.1021/acs.nanolett.6c01462</a>.
  short: A. Gulyaev, J. Hazarika, Z.-F. Liu, L. Venkataraman, Nano Letters 26 (2026)
    7429–7434.
corr_author: '1'
das_tickbox: '1'
date_created: 2026-06-10T07:27:19Z
date_published: 2026-06-01T00:00:00Z
date_updated: 2026-07-28T09:57:28Z
day: '01'
ddc:
- '540'
department:
- _id: LaVe
- _id: GradSch
doi: 10.1021/acs.nanolett.6c01462
external_id:
  chemrxivid:
  - 10.26434/chemrxiv.15001696
  pmid:
  - '42223342'
file:
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  file_size: 3362800
  relation: main_file
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fulldoi: https://doi.org/10.1021/acs.nanolett.6c01462
has_accepted_license: '1'
intvolume: '        26'
issue: '22'
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
page: 7429–7434
pmid: 1
publication: Nano Letters
publication_identifier:
  eissn:
  - 1530-6992
  issn:
  - 1530-6984
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: A computationally efficient and accurate method for predicting conductance
  of single-molecule junctions
tmp:
  image: /images/cc_by.png
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  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 26
year: '2026'
...
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OA_type: green
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abstract:
- lang: eng
  text: We consider a class of two-dimensional tight binding models displaying conical
    intersections of the Bloch bands at the Fermi level. The setting includes the
    case of generic transitions between quantum Hall phases. We consider the longitudinal
    conductivity, as given by Kubo formula, describing the variation of the current
    after introducing a space-homogeneous electric field, in an adiabatic way. We
    obtain an explicit expression for the longitudinal conductivity, completely determined
    by the number of conical intersections and by the shape of the cones. In particular,
    the formula reproduces the known quantized values found for graphene and for the
    critical Haldane model. Furthermore, we discuss the validity of Kubo formula in
    presence of conical intersections in the spectrum, starting from the time-dependent
    Schrödinger equation. For electric fields which are weak and slowly varying in
    space and in time, we prove the validity of linear response from quantum dynamics.
acknowledgement: G. M. and M. P. acknowledge support by the European Research Council
  through the ERC-StG MaMBoQ, n. 802901. G. M. acknowledges financial support from
  the Independent Research Fund Denmark–Natural Sciences, grant DFF–10.46540/2032-00005B
  and from the European Research Council through the ERC CoG UniCoSM, grant agreement
  n.724939. M. P. acknowledges support from the MUR, PRIN 2022 project MaIQuFi cod.
  20223J85K3. This work has been carried out under the auspices of the GNFM of INdAM.
  We thank the anonymous referees for comments on a previous version of this manuscript.
article_number: '82'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Giovanna
  full_name: Marcelli, Giovanna
  last_name: Marcelli
- first_name: Lorenzo
  full_name: Pigozzi, Lorenzo
  id: efb8f850-3208-11ee-ac71-8c4f5803b9c6
  last_name: Pigozzi
- first_name: Marcello
  full_name: Porta, Marcello
  last_name: Porta
citation:
  ama: Marcelli G, Pigozzi L, Porta M. Longitudinal conductivity at integer quantum
    Hall transitions. <i>Letters in Mathematical Physics</i>. 2026;116(4). doi:<a
    href="https://doi.org/10.1007/s11005-026-02087-3">10.1007/s11005-026-02087-3</a>
  apa: Marcelli, G., Pigozzi, L., &#38; Porta, M. (2026). Longitudinal conductivity
    at integer quantum Hall transitions. <i>Letters in Mathematical Physics</i>. Springer
    Nature. <a href="https://doi.org/10.1007/s11005-026-02087-3">https://doi.org/10.1007/s11005-026-02087-3</a>
  chicago: Marcelli, Giovanna, Lorenzo Pigozzi, and Marcello Porta. “Longitudinal
    Conductivity at Integer Quantum Hall Transitions.” <i>Letters in Mathematical
    Physics</i>. Springer Nature, 2026. <a href="https://doi.org/10.1007/s11005-026-02087-3">https://doi.org/10.1007/s11005-026-02087-3</a>.
  ieee: G. Marcelli, L. Pigozzi, and M. Porta, “Longitudinal conductivity at integer
    quantum Hall transitions,” <i>Letters in Mathematical Physics</i>, vol. 116, no.
    4. Springer Nature, 2026.
  ista: Marcelli G, Pigozzi L, Porta M. 2026. Longitudinal conductivity at integer
    quantum Hall transitions. Letters in Mathematical Physics. 116(4), 82.
  mla: Marcelli, Giovanna, et al. “Longitudinal Conductivity at Integer Quantum Hall
    Transitions.” <i>Letters in Mathematical Physics</i>, vol. 116, no. 4, 82, Springer
    Nature, 2026, doi:<a href="https://doi.org/10.1007/s11005-026-02087-3">10.1007/s11005-026-02087-3</a>.
  short: G. Marcelli, L. Pigozzi, M. Porta, Letters in Mathematical Physics 116 (2026).
das_tickbox: '1'
dataavailabilitystatement: Data sharing is not applicable to this article as no datasets
  were generated or analyzed during the current study.
date_created: 2026-07-26T22:01:40Z
date_published: 2026-08-01T00:00:00Z
date_updated: 2026-07-29T10:51:55Z
day: '01'
department:
- _id: RoSe
- _id: GradSch
doi: 10.1007/s11005-026-02087-3
external_id:
  arxiv:
  - '2503.01381'
fulldoi: https://doi.org/10.1007/s11005-026-02087-3
intvolume: '       116'
issue: '4'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2503.01381
mathsc:
- 81V70
month: '08'
oa: 1
oa_version: Preprint
publication: Letters in Mathematical Physics
publication_identifier:
  eissn:
  - 1573-0530
  issn:
  - 0377-9017
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
researchdata_availability: not applicable
scopus_import: '1'
status: public
supplementarymaterial: no
title: Longitudinal conductivity at integer quantum Hall transitions
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 116
year: '2026'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '22607'
abstract:
- lang: eng
  text: "Farkas established that a system of linear inequalities has a solution if
    and only if we cannot obtain a contradiction by taking a linear combination of
    the inequalities. We state and formally prove several Farkas-like theorems over
    linearly ordered fields in Lean 4. Furthermore, we extend duality theory to the
    case when some coefficients are allowed to take \"infinite values\".\r\nCode:
    https://github.com/madvorak/duality/tree/v3.2.0"
acknowledgement: "We would like to thank David Bartl and Jasmin Blanchette for frequent
  consultations.\r\nWe would also like to express gratitude to Henrik Böving for a
  help with generalization\r\nfrom extended rationals to extended linearly ordered
  fields and to Andrew Yang for the\r\nproof of Finset.univ_sum_of_zero_when_not.
  We would also like to acknowledge Antoine\r\nChambert-Loir, Apurva Nakade, Yaël
  Dillies, Richard Copley, Edward van de Meent, Markus\r\nHimmel, Mario Carneiro,
  and Kevin Buzzard."
article_number: '14253'
article_processing_charge: Yes (in subscription journal)
article_type: original
arxiv: 1
author:
- first_name: Martin
  full_name: Dvorak, Martin
  id: 40ED02A8-C8B4-11E9-A9C0-453BE6697425
  last_name: Dvorak
  orcid: 0000-0001-5293-214X
- first_name: Vladimir
  full_name: Kolmogorov, Vladimir
  id: 3D50B0BA-F248-11E8-B48F-1D18A9856A87
  last_name: Kolmogorov
citation:
  ama: Dvorak M, Kolmogorov V. Duality theory in linear optimization and its extensions
    -- formally verified. <i>Annals of Formalized Mathematics</i>. 2026;2. doi:<a
    href="https://doi.org/10.46298/afm.14253">10.46298/afm.14253</a>
  apa: Dvorak, M., &#38; Kolmogorov, V. (2026). Duality theory in linear optimization
    and its extensions -- formally verified. <i>Annals of Formalized Mathematics</i>.
    EPI Sciences. <a href="https://doi.org/10.46298/afm.14253">https://doi.org/10.46298/afm.14253</a>
  chicago: Dvorak, Martin, and Vladimir Kolmogorov. “Duality Theory in Linear Optimization
    and Its Extensions -- Formally Verified.” <i>Annals of Formalized Mathematics</i>.
    EPI Sciences, 2026. <a href="https://doi.org/10.46298/afm.14253">https://doi.org/10.46298/afm.14253</a>.
  ieee: M. Dvorak and V. Kolmogorov, “Duality theory in linear optimization and its
    extensions -- formally verified,” <i>Annals of Formalized Mathematics</i>, vol.
    2. EPI Sciences, 2026.
  ista: Dvorak M, Kolmogorov V. 2026. Duality theory in linear optimization and its
    extensions -- formally verified. Annals of Formalized Mathematics. 2, 14253.
  mla: Dvorak, Martin, and Vladimir Kolmogorov. “Duality Theory in Linear Optimization
    and Its Extensions -- Formally Verified.” <i>Annals of Formalized Mathematics</i>,
    vol. 2, 14253, EPI Sciences, 2026, doi:<a href="https://doi.org/10.46298/afm.14253">10.46298/afm.14253</a>.
  short: M. Dvorak, V. Kolmogorov, Annals of Formalized Mathematics 2 (2026).
corr_author: '1'
das_tickbox: '0'
date_created: 2026-07-29T09:06:55Z
date_published: 2026-03-13T00:00:00Z
date_updated: 2026-07-29T10:50:17Z
day: '13'
ddc:
- '500'
department:
- _id: VlKo
- _id: GradSch
doi: 10.46298/afm.14253
external_id:
  arxiv:
  - '2409.08119'
fulldoi: https://doi.org/10.46298/afm.14253
has_accepted_license: '1'
intvolume: '         2'
keyword:
- Farkas lemma
- linear programming
- extended reals
- calculus of inductive constructions
language:
- iso: eng
mathsc:
- 68V20
- 15A39
- 90C05
month: '03'
oa_version: Published Version
publication: Annals of Formalized Mathematics
publication_identifier:
  eissn:
  - 3117-4604
publication_status: published
publisher: EPI Sciences
quality_controlled: '1'
related_material:
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  - id: '20071'
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    status: public
researchdata_availability: no
status: public
supplementarymaterial: no
title: Duality theory in linear optimization and its extensions -- formally verified
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  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 2
year: '2026'
...
---
OA_place: repository
_id: '21393'
abstract:
- lang: eng
  text: "This thesis documents a voyage towards truth and beauty via formal verification
    of theorems. To this end, we develop libraries in Lean 4 that present definitions
    and results from diverse areas of MathematiCS (i.e., Mathematics and Computer
    Science). The aim is to create code that is understandable, believable, useful,
    and elegant. The code should stand for itself as much as possible without a need
    for documentation; however, this text redundantly documents our code artifacts
    and provides additional context that isn’t present in the code. This thesis is
    written for readers who know Lean 4 but are not familiar with any of the topics
    presented. We manifest truth and beauty in three formalized areas of MathematiCS.\r\n\r\nWe
    formalize general grammars in Lean 4 and use grammars to show closure of the class
    of type-0 languages under four operations; union, reversal, concatenation, and
    the Kleene star.\r\n\r\nOur second stop is the theory of optimization. Farkas
    established that a system of linear inequalities has a solution if and only if
    we cannot obtain a contradiction by taking a linear combination of the inequalities.
    We state and formally prove several Farkas-like theorems over linearly ordered
    fields in Lean 4. Furthermore, we extend duality theory to the case when some
    coefficients are allowed to take “infinite values”. Additionally, we develop the
    basics of the theory of optimization in terms of the framework called General-Valued
    Constraint Satisfaction Problems, and we prove that, if a Rational-Valued Constraint
    Satisfaction Problem template has symmetric fractional polymorphisms of all arities,
    then its basic LP relaxation is tight.\r\n\r\nOur third stop is matroid theory.
    Seymour’s decomposition theorem is a hallmark result in matroid theory, presenting
    a structural characterization of the class of regular matroids. We aim to formally
    verify Seymour’s theorem in Lean 4. First, we build a library for working with
    totally unimodular matrices. We define binary matroids and their standard representations,
    and we prove that they form a matroid in the sense how Mathlib defines matroids.
    We define regular matroids to be matroids for which there exists a full representation
    rational matrix that is totally unimodular, and we prove that all regular matroids
    are binary. We define 1-sum, 2-sum, and 3 sum of binary matroids as specific ways
    to compose their standard representation matrices. We prove that the 1-sum, the
    2-sum, and the 3-sum of regular matroids are a regular matroid, which concludes
    the composition direction of the Seymour’s theorem. The (more difficult) decomposition
    direction remains unproved.\r\n\r\nIn the pursuit of truth, we focus on identifying
    the trusted code in each project and presenting it faithfully. We emphasize the
    readability and believability of definitions rather than choosing definitions
    that are easier to work with. In search for beauty, we focus on the philosophical
    framework of Roger Scruton, who emphasizes that beauty is not a mere decoration
    but, most importantly, beauty is the means for shaping our place in the world
    and a source of redemption, where it can be viewed as a substitute for religion."
alternative_title:
- ISTA Thesis
article_processing_charge: No
author:
- first_name: Martin
  full_name: Dvorak, Martin
  id: 40ED02A8-C8B4-11E9-A9C0-453BE6697425
  last_name: Dvorak
  orcid: 0000-0001-5293-214X
citation:
  ama: 'Dvorak M. Pursuit of truth and beauty in Lean 4: Formally verified theory
    of grammars, optimization, matroids. 2026. doi:<a href="https://doi.org/10.15479/AT-ISTA-21393">10.15479/AT-ISTA-21393</a>'
  apa: 'Dvorak, M. (2026). <i>Pursuit of truth and beauty in Lean 4: Formally verified
    theory of grammars, optimization, matroids</i>. Institute of Science and Technology
    Austria. <a href="https://doi.org/10.15479/AT-ISTA-21393">https://doi.org/10.15479/AT-ISTA-21393</a>'
  chicago: 'Dvorak, Martin. “Pursuit of Truth and Beauty in Lean 4: Formally Verified
    Theory of Grammars, Optimization, Matroids.” Institute of Science and Technology
    Austria, 2026. <a href="https://doi.org/10.15479/AT-ISTA-21393">https://doi.org/10.15479/AT-ISTA-21393</a>.'
  ieee: 'M. Dvorak, “Pursuit of truth and beauty in Lean 4: Formally verified theory
    of grammars, optimization, matroids,” Institute of Science and Technology Austria,
    2026.'
  ista: 'Dvorak M. 2026. Pursuit of truth and beauty in Lean 4: Formally verified
    theory of grammars, optimization, matroids. Institute of Science and Technology
    Austria.'
  mla: 'Dvorak, Martin. <i>Pursuit of Truth and Beauty in Lean 4: Formally Verified
    Theory of Grammars, Optimization, Matroids</i>. Institute of Science and Technology
    Austria, 2026, doi:<a href="https://doi.org/10.15479/AT-ISTA-21393">10.15479/AT-ISTA-21393</a>.'
  short: 'M. Dvorak, Pursuit of Truth and Beauty in Lean 4: Formally Verified Theory
    of Grammars, Optimization, Matroids, Institute of Science and Technology Austria,
    2026.'
corr_author: '1'
date_created: 2026-03-04T09:26:46Z
date_published: 2026-03-04T00:00:00Z
date_updated: 2026-07-29T12:56:52Z
day: '04'
ddc:
- '511'
- '000'
degree_awarded: PhD
department:
- _id: GradSch
- _id: VlKo
doi: 10.15479/AT-ISTA-21393
doi_confirm: '1'
file:
- access_level: open_access
  checksum: cface6dc18152680962b5361575f6e4f
  content_type: application/pdf
  creator: mdvorak
  date_created: 2026-03-04T08:56:15Z
  date_updated: 2026-03-04T08:56:15Z
  file_id: '21394'
  file_name: 2026_Dvorak_Martin_Thesis.pdf
  file_size: 1771231
  relation: main_file
  success: 1
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  checksum: 290ddfacfb7e07fb07e6f0b334e67c90
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  creator: mdvorak
  date_created: 2026-03-04T09:03:37Z
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fulldoi: https://doi.org/10.15479/AT-ISTA-21393
has_accepted_license: '1'
language:
- iso: eng
month: '03'
oa: 1
oa_version: Published Version
page: '160'
publication_identifier:
  isbn:
  - 978-3-99078-074-9
  issn:
  - 2663-337X
publication_status: published
publisher: Institute of Science and Technology Austria
related_material:
  link:
  - description: Full version of all definitions, statements, and proofs for Chapter
      3.1 (Linear duality)
    relation: software
    url: https://github.com/madvorak/duality/tree/v3.5.0
  - description: Full version of all definitions, statements, and proofs for Chapter
      3.2 (Valued Constraint Satisfaction Problems)
    relation: software
    url: https://github.com/madvorak/vcsp/tree/v8.2.0
  - description: Full version of all definitions, statements, and proofs for Chapter
      4 (Seymour project)
    relation: software
    url: https://github.com/Ivan-Sergeyev/seymour/tree/v1.2.0
  - description: Full version of all definitions, statements, and proofs for Chapter
      5 (Theory of grammars)
    relation: software
    url: https://github.com/madvorak/chomsky/tree/v1.2.0
  - description: Old version (Lean 3) of the project about grammars
    relation: software
    url: https://github.com/madvorak/grammars
  - description: Demonstration of (minimal) requirements for selected algebraic classes
      used in my Ph.D. thesis
    relation: software
    url: https://github.com/madvorak/preliminaries/blob/main/Preliminaries.lean
  record:
  - id: '13120'
    relation: part_of_dissertation
    status: public
  - id: '20071'
    relation: part_of_dissertation
    status: public
  - id: '21398'
    relation: part_of_dissertation
    status: public
status: public
supervisor:
- first_name: Vladimir
  full_name: Kolmogorov, Vladimir
  id: 3D50B0BA-F248-11E8-B48F-1D18A9856A87
  last_name: Kolmogorov
- first_name: Jasmin
  full_name: Blanchette, Jasmin
  last_name: Blanchette
title: 'Pursuit of truth and beauty in Lean 4: Formally verified theory of grammars,
  optimization, matroids'
tmp:
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  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: dissertation
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
year: '2026'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '22406'
abstract:
- lang: eng
  text: "It is known that for a uniform morphic sequence \U0001D496 =⟨\U0001D462\U0001D45B⟩∞\r\n\U0001D45B=0
    and an algebraic number \U0001D6FD such that |\U0001D6FD| >1, the number [[\U0001D496]]\U0001D6FD
    :=∑∞\r\n\U0001D45B=0(\U0001D462\U0001D45B/\U0001D6FD\U0001D45B) either lies in
    ℚ⁡(\U0001D6FD) or is transcendental. In this paper, we show a similar rational–transcendental
    dichotomy for sequences defined by irreducible Pisot morphisms on binary alphabets.
    Subject to the Pisot conjecture (an irreducible Pisot morphism has pure discrete
    spectrum), we generalise the latter result to arbitrary finite alphabets. In certain
    cases, we are able to show transcendence of [[\U0001D496]]\U0001D6FD outright.
    In particular, for \U0001D458 ≥2, if \U0001D496 is the k-Bonacci word, then [[\U0001D496]]\U0001D6FD
    is transcendental."
acknowledgement: "We thank the anonymous referee for identifying an error in an earlier\r\nversion
  of the paper. We gratefully acknowledge support from UKRI Frontier Research\r\nGrant
  EP/X033813/1, ERC grant DynAMiCS (101167561) and DFG grant 389792660 as\r\npart
  of TRR 248. J.O. is also affiliated with Keble College, Oxford as an Emmy Network\r\nfellow."
article_processing_charge: Yes (in subscription journal)
article_type: original
arxiv: 1
author:
- first_name: Pavol
  full_name: Kebis, Pavol
  id: 2e0132b3-4e98-11ef-b275-cf7281c2802a
  last_name: Kebis
- first_name: FLORIAN
  full_name: LUCA, FLORIAN
  last_name: LUCA
- first_name: JOEL
  full_name: OUAKNINE, JOEL
  last_name: OUAKNINE
- first_name: ANDREW
  full_name: SCOONES, ANDREW
  last_name: SCOONES
- first_name: JAMES
  full_name: WORRELL, JAMES
  last_name: WORRELL
citation:
  ama: Kebis P, LUCA F, OUAKNINE J, SCOONES A, WORRELL J. Transcendence for Pisot
    morphic words over an algebraic base. <i>Ergodic Theory and Dynamical Systems</i>.
    2026:1-22. doi:<a href="https://doi.org/10.1017/etds.2026.10324">10.1017/etds.2026.10324</a>
  apa: Kebis, P., LUCA, F., OUAKNINE, J., SCOONES, A., &#38; WORRELL, J. (2026). Transcendence
    for Pisot morphic words over an algebraic base. <i>Ergodic Theory and Dynamical
    Systems</i>. Cambridge University Press. <a href="https://doi.org/10.1017/etds.2026.10324">https://doi.org/10.1017/etds.2026.10324</a>
  chicago: Kebis, Pavol, FLORIAN LUCA, JOEL OUAKNINE, ANDREW SCOONES, and JAMES WORRELL.
    “Transcendence for Pisot Morphic Words over an Algebraic Base.” <i>Ergodic Theory
    and Dynamical Systems</i>. Cambridge University Press, 2026. <a href="https://doi.org/10.1017/etds.2026.10324">https://doi.org/10.1017/etds.2026.10324</a>.
  ieee: P. Kebis, F. LUCA, J. OUAKNINE, A. SCOONES, and J. WORRELL, “Transcendence
    for Pisot morphic words over an algebraic base,” <i>Ergodic Theory and Dynamical
    Systems</i>. Cambridge University Press, pp. 1–22, 2026.
  ista: Kebis P, LUCA F, OUAKNINE J, SCOONES A, WORRELL J. 2026. Transcendence for
    Pisot morphic words over an algebraic base. Ergodic Theory and Dynamical Systems.,
    1–22.
  mla: Kebis, Pavol, et al. “Transcendence for Pisot Morphic Words over an Algebraic
    Base.” <i>Ergodic Theory and Dynamical Systems</i>, Cambridge University Press,
    2026, pp. 1–22, doi:<a href="https://doi.org/10.1017/etds.2026.10324">10.1017/etds.2026.10324</a>.
  short: P. Kebis, F. LUCA, J. OUAKNINE, A. SCOONES, J. WORRELL, Ergodic Theory and
    Dynamical Systems (2026) 1–22.
das_tickbox: '0'
date_created: 2026-07-27T05:53:25Z
date_published: 2026-07-10T00:00:00Z
date_updated: 2026-08-03T06:17:50Z
day: '10'
ddc:
- '000'
department:
- _id: ToHe
- _id: GradSch
doi: 10.1017/etds.2026.10324
external_id:
  arxiv:
  - '2405.05279'
fulldoi: https://doi.org/10.1017/etds.2026.10324
has_accepted_license: '1'
keyword:
- balanced-pair algorithm
- Cobham’s conjecture
- k-Bonacci words
- Pisot conjecture
- subspace theorem
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1017/etds.2026.10324
mathsc:
- 11J81
- 37B10
- 11J87
month: '07'
oa: 1
oa_version: Published Version
page: 1-22
publication: Ergodic Theory and Dynamical Systems
publication_identifier:
  eissn:
  - 1469-4417
  issn:
  - 0143-3857
publication_status: epub_ahead
publisher: Cambridge University Press
quality_controlled: '1'
researchdata_availability: no
scopus_import: '1'
status: public
supplementarymaterial: no
title: Transcendence for Pisot morphic words over an algebraic base
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2026'
...
---
OA_place: repository
OA_type: green
_id: '22619'
abstract:
- lang: eng
  text: Planar germanium is currently the only semiconducting platform where high-coherence
    spin qubits and proximity-induced superconductivity have each been demonstrated.
    Recent research into spin qubits in Ge/SiGe heterostructures has focused on increasing
    the thickness of the SiGe capping layer, reporting improvements in the electrostatic
    noise levels. Meanwhile, heterostructures with thinner capping layers remain rather
    unexplored, despite the potential advantages for proximity-induced superconductivity.
    Here, we study a Ge/SiGe heterostructure with a thin SiGe cap d - 4nm and investigate
    its viability to host low-noise quantum dots. To keep the thermal budget compatible
    with superconducting layers, low-temperature oxide deposition processes were developed
    and implemented for the gate dielectrics. The charge noise level of the fabricated
    devices is estimated to be 1.8  +- 1.0 μeV/ square HZ⁠, comparable to devices
    fabricated on shallow heterostructures (⁠ d - 20nm⁠) with high-temperature deposited
    oxides. Low charge noise levels, together with the straightforward integration
    of superconductors, make this heterostructure an attractive platform for prototyping
    hybrid semiconducting–superconducting devices.
acknowledged_ssus:
- _id: M-Shop
- _id: NanoFab
acknowledgement: 'We sincerely thank Nick van Loo, Greg Mazur, Dhananjay Joshi, and
  Srijit Goswami for their inputs on low-temperature HfOx deposition; Matias Urdampilleta
  and Daniel Jirovec for discussions; and Kristen Léonard for the careful reading
  of the manuscript. This research was supported by the Scientific Service Units of
  ISTA through resources provided by the Miba Machine Shop and the Nanofabrication
  facility. The authors acknowledge support from the NOMIS Foundation; the European
  Innovation Council Pathfinder Grant No. 101115315 (QuKiT); the FWF Projects with
  DOI:10.55776/F86, DOI:10.55776/PAT7682124, and DOI:10.55776/P36507; and the HE-MSCA-PF
  project with DOI:10.3030/101150858. ICN2 is supported by the Severo Ochoa Program
  from Spanish MCIN/AEI (Grant No.: CEX2021-001214-S) and is funded by the CERCA Program/Generalitat
  de Catalunya. ICN2 acknowledges funding from Generalitat de Catalunya (No. 2021SGR00457).
  We acknowledge support from the CSIC Interdisciplinary Thematic Platform (PTI+)
  on Quantum Technologies (PTI-QTEP+).'
article_number: '033505'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Maksim
  full_name: Borovkov, Maksim
  id: 1fd0975f-8b61-11ed-b69e-d149334f28c5
  last_name: Borovkov
- first_name: Yona A
  full_name: Schell, Yona A
  id: fe39122d-06bb-11ec-a33b-9e22b40e40a5
  last_name: Schell
- first_name: Dina
  full_name: Sokolova, Dina
  id: 2d2d62f8-72f0-11ef-b75a-8ec3e8a60032
  last_name: Sokolova
- first_name: Kevin Etienne Robert
  full_name: Roux, Kevin Etienne Robert
  id: 53f93ea2-803f-11ed-ab7e-b283135794ef
  last_name: Roux
- first_name: Paul
  full_name: Falthansl-Scheinecker, Paul
  id: 85b43b21-15b2-11ec-abd3-e2c252cc2285
  last_name: Falthansl-Scheinecker
- first_name: Giorgio
  full_name: Fabris, Giorgio
  id: 298cf6f3-1ff6-11ee-9fa6-d94cfa0b3352
  last_name: Fabris
- first_name: Devashish C
  full_name: Shah, Devashish C
  id: de191434-4e7e-11ef-bf4b-9a056fc19fc3
  last_name: Shah
  orcid: 0009-0007-5829-7707
- first_name: Jaime
  full_name: Saez Mollejo, Jaime
  id: e0390f72-f6e0-11ea-865d-862393336714
  last_name: Saez Mollejo
- first_name: Rodolfo
  full_name: Previdi, Rodolfo
  id: bc4ea1dc-00ce-11ec-8a4e-b325ca8b9876
  last_name: Previdi
- first_name: Inas
  full_name: Taha, Inas
  last_name: Taha
- first_name: Aziz
  full_name: Genç, Aziz
  last_name: Genç
- first_name: Jordi
  full_name: Arbiol, Jordi
  last_name: Arbiol
- first_name: Stefano
  full_name: Calcaterra, Stefano
  last_name: Calcaterra
- first_name: Afonso De Cerdeira
  full_name: Oliveira, Afonso De Cerdeira
  last_name: Oliveira
- first_name: Daniel
  full_name: Chrastina, Daniel
  last_name: Chrastina
- first_name: Giovanni
  full_name: Isella, Giovanni
  last_name: Isella
- first_name: Anton
  full_name: Bubis, Anton
  id: 1f6212b5-f795-11ec-9c0c-de4780302890
  last_name: Bubis
- first_name: Georgios
  full_name: Katsaros, Georgios
  id: 38DB5788-F248-11E8-B48F-1D18A9856A87
  last_name: Katsaros
  orcid: 0000-0001-8342-202X
citation:
  ama: Borovkov M, Schell YA, Sokolova D, et al. Low-noise quantum dots in ultra-shallow
    Ge/SiGe heterostructures for prototyping hybrid semiconducting–superconducting
    devices. <i>Applied Physics Letters</i>. 2026;129(3). doi:<a href="https://doi.org/10.1063/5.0333142">10.1063/5.0333142</a>
  apa: Borovkov, M., Schell, Y. A., Sokolova, D., Roux, K. E. R., Falthansl-Scheinecker,
    P., Fabris, G., … Katsaros, G. (2026). Low-noise quantum dots in ultra-shallow
    Ge/SiGe heterostructures for prototyping hybrid semiconducting–superconducting
    devices. <i>Applied Physics Letters</i>. AIP Publishing. <a href="https://doi.org/10.1063/5.0333142">https://doi.org/10.1063/5.0333142</a>
  chicago: Borovkov, Maksim, Yona A Schell, Dina Sokolova, Kevin Etienne Robert Roux,
    Paul Falthansl-Scheinecker, Giorgio Fabris, Devashish C Shah, et al. “Low-Noise
    Quantum Dots in Ultra-Shallow Ge/SiGe Heterostructures for Prototyping Hybrid
    Semiconducting–Superconducting Devices.” <i>Applied Physics Letters</i>. AIP Publishing,
    2026. <a href="https://doi.org/10.1063/5.0333142">https://doi.org/10.1063/5.0333142</a>.
  ieee: M. Borovkov <i>et al.</i>, “Low-noise quantum dots in ultra-shallow Ge/SiGe
    heterostructures for prototyping hybrid semiconducting–superconducting devices,”
    <i>Applied Physics Letters</i>, vol. 129, no. 3. AIP Publishing, 2026.
  ista: Borovkov M, Schell YA, Sokolova D, Roux KER, Falthansl-Scheinecker P, Fabris
    G, Shah DC, Saez Mollejo J, Previdi R, Taha I, Genç A, Arbiol J, Calcaterra S,
    Oliveira ADC, Chrastina D, Isella G, Bubis A, Katsaros G. 2026. Low-noise quantum
    dots in ultra-shallow Ge/SiGe heterostructures for prototyping hybrid semiconducting–superconducting
    devices. Applied Physics Letters. 129(3), 033505.
  mla: Borovkov, Maksim, et al. “Low-Noise Quantum Dots in Ultra-Shallow Ge/SiGe Heterostructures
    for Prototyping Hybrid Semiconducting–Superconducting Devices.” <i>Applied Physics
    Letters</i>, vol. 129, no. 3, 033505, AIP Publishing, 2026, doi:<a href="https://doi.org/10.1063/5.0333142">10.1063/5.0333142</a>.
  short: M. Borovkov, Y.A. Schell, D. Sokolova, K.E.R. Roux, P. Falthansl-Scheinecker,
    G. Fabris, D.C. Shah, J. Saez Mollejo, R. Previdi, I. Taha, A. Genç, J. Arbiol,
    S. Calcaterra, A.D.C. Oliveira, D. Chrastina, G. Isella, A. Bubis, G. Katsaros,
    Applied Physics Letters 129 (2026).
corr_author: '1'
das_tickbox: '1'
dataavailabilitystatement: The data that support the findings of this study are openly
  available in Institute of Science and Technology repository at http://doi.org/10.15479/AT-ISTA-22242,
  Ref. 50.
date_created: 2026-08-02T22:01:53Z
date_published: 2026-07-20T00:00:00Z
date_updated: 2026-08-03T11:08:39Z
day: '20'
department:
- _id: GeKa
- _id: GradSch
- _id: NanoFab
doi: 10.1063/5.0333142
external_id:
  arxiv:
  - '2602.21363'
fulldoi: https://doi.org/10.1063/5.0333142
intvolume: '       129'
issue: '3'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2602.21363
month: '07'
oa: 1
oa_version: Preprint
project:
- _id: bdc2ca30-d553-11ed-ba76-cf164a5bb811
  grant_number: '101115315'
  name: Quantum bits with Kitaev Transmons
- _id: 34a66131-11ca-11ed-8bc3-a31681c6b03e
  grant_number: F8606
  name: 'Center for Correlated Quantum Materials and Solid State Quantum Systems:
    Conventional  and unconventional topological superconductors'
- _id: 5b9e579c-ab3d-11f0-914f-88754c5b5a3f
  grant_number: PAT 7682124
  name: Superconducting spin qubits in planar Ge
- _id: bd8bd29e-d553-11ed-ba76-f0070d4b237a
  grant_number: P36507
  name: Merging spin and superconducting qubits in planar Ge
- _id: 8ea8abf7-16d5-11f0-9cad-c41e56ec8bb3
  grant_number: '101150858'
  name: Realization and Manipulation of a Planar hybrid superconducting Andreev spin
    qubit in Germanium
publication: Applied Physics Letters
publication_identifier:
  eissn:
  - 1077-3118
  issn:
  - 0003-6951
publication_status: published
publisher: AIP Publishing
quality_controlled: '1'
related_material:
  record:
  - id: '22242'
    relation: research_data
    status: public
researchdata_availability: yes
scopus_import: '1'
status: public
supplementarymaterial: yes
title: Low-noise quantum dots in ultra-shallow Ge/SiGe heterostructures for prototyping
  hybrid semiconducting–superconducting devices
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 129
year: '2026'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
PlanS_conform: '1'
_id: '22618'
abstract:
- lang: eng
  text: "We use a function field version of the circle method to prove that a positive
    proportion of elements in \U0001D53D\U0001D45E⁡[\U0001D461] are representable
    as a sum of three cubes of minimal degree from \U0001D53D\U0001D45E⁡[\U0001D461],
    assuming a suitable form of the Ratios Conjecture and that char⁡(\U0001D53D\U0001D45E)
    >3. The analogue of this conjecture for quadratic Dirichlet L-functions is known
    for large fixed q, via recent developments in homological stability."
acknowledgement: While working on this paper the first two authors were supported
  by FWF grant (DOI 10.55776/P36278) and the third author was supported by the European
  Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie
  Grant Agreement No. 101034413, and by the National Science and Technology Council
  Project Grant 114-2115-M-001-010-MY2.
article_number: e112
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Timothy D
  full_name: Browning, Timothy D
  id: 35827D50-F248-11E8-B48F-1D18A9856A87
  last_name: Browning
  orcid: 0000-0002-8314-0177
- first_name: Jakob
  full_name: Glas, Jakob
  id: d6423cba-dc74-11ea-a0a7-ee61689ff5fb
  last_name: Glas
- first_name: Victor
  full_name: Wang, Victor
  id: 76096395-aea4-11ed-a680-ab8ebbd3f1b9
  last_name: Wang
  orcid: 0000-0002-0704-7026
citation:
  ama: Browning TD, Glas J, Wang V. Sums of three cubes over a function field. <i>Forum
    of Mathematics Sigma</i>. 2026;14. doi:<a href="https://doi.org/10.1017/fms.2026.10259">10.1017/fms.2026.10259</a>
  apa: Browning, T. D., Glas, J., &#38; Wang, V. (2026). Sums of three cubes over
    a function field. <i>Forum of Mathematics Sigma</i>. Cambridge University Press.
    <a href="https://doi.org/10.1017/fms.2026.10259">https://doi.org/10.1017/fms.2026.10259</a>
  chicago: Browning, Timothy D, Jakob Glas, and Victor Wang. “Sums of Three Cubes
    over a Function Field.” <i>Forum of Mathematics Sigma</i>. Cambridge University
    Press, 2026. <a href="https://doi.org/10.1017/fms.2026.10259">https://doi.org/10.1017/fms.2026.10259</a>.
  ieee: T. D. Browning, J. Glas, and V. Wang, “Sums of three cubes over a function
    field,” <i>Forum of Mathematics Sigma</i>, vol. 14. Cambridge University Press,
    2026.
  ista: Browning TD, Glas J, Wang V. 2026. Sums of three cubes over a function field.
    Forum of Mathematics Sigma. 14, e112.
  mla: Browning, Timothy D., et al. “Sums of Three Cubes over a Function Field.” <i>Forum
    of Mathematics Sigma</i>, vol. 14, e112, Cambridge University Press, 2026, doi:<a
    href="https://doi.org/10.1017/fms.2026.10259">10.1017/fms.2026.10259</a>.
  short: T.D. Browning, J. Glas, V. Wang, Forum of Mathematics Sigma 14 (2026).
corr_author: '1'
das_tickbox: '0'
date_created: 2026-08-02T22:01:52Z
date_published: 2026-07-22T00:00:00Z
date_updated: 2026-08-03T12:13:59Z
day: '22'
ddc:
- '500'
department:
- _id: TiBr
- _id: GradSch
doi: 10.1017/fms.2026.10259
ec_funded: 1
external_id:
  arxiv:
  - '2402.07146'
file:
- access_level: open_access
  checksum: e92a762e03f832bdca8c106a9a88ef9b
  content_type: application/pdf
  creator: dernst
  date_created: 2026-08-03T12:12:03Z
  date_updated: 2026-08-03T12:12:03Z
  file_id: '22636'
  file_name: 2026_ForumMathematics_Browning.pdf
  file_size: 810718
  relation: main_file
  success: 1
file_date_updated: 2026-08-03T12:12:03Z
fulldoi: https://doi.org/10.1017/fms.2026.10259
has_accepted_license: '1'
intvolume: '        14'
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
project:
- _id: bd8a4fdc-d553-11ed-ba76-80a0167441a3
  grant_number: P36278
  name: Rational curves via function field analytic number theory
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
  call_identifier: H2020
  grant_number: '101034413'
  name: 'IST-BRIDGE: International postdoctoral program'
publication: Forum of Mathematics Sigma
publication_identifier:
  eissn:
  - 2050-5094
publication_status: published
publisher: Cambridge University Press
quality_controlled: '1'
researchdata_availability: no
scopus_import: '1'
status: public
supplementarymaterial: no
title: Sums of three cubes over a function field
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 14
year: '2026'
...
---
OA_place: repository
_id: '22242'
abstract:
- lang: eng
  text: This deposit contains the data and analysis code accompanying the publication
    "Low-Noise Quantum Dots in Ultra-Shallow Ge/SiGe Heterostructures for Prototyping
    Hybrid Semiconducting–Superconducting Devices" (Borovkov et al.). The deposit
    includes the raw transport and current-noise measurements of three gate-defined
    quantum-dot devices as QCodes SQLite databases, the master table of the charge-noise
    (flank-method) analysis with the pointers linking every analyzed PSD trace to
    the raw data, the toy-model noise simulation datasets behind the supplementary
    figures, the archived analysis figures (PSD fits and lever-arm extractions), and
    the Python code reproducing the full analysis and all figures. The code is also
    maintained at https://github.com/ISTA-Nanoelectronics/noise_paper_public; instructions
    are provided in the README files.
acknowledged_ssus:
- _id: M-Shop
- _id: NanoFab
article_processing_charge: No
author:
- first_name: Maksim
  full_name: Borovkov, Maksim
  id: 1fd0975f-8b61-11ed-b69e-d149334f28c5
  last_name: Borovkov
citation:
  ama: Borovkov M. Low-Noise Quantum Dots in Ultra-Shallow Ge/SiGe Heterostructures
    for Prototyping Hybrid Semiconducting-Superconducting Devices. 2026. doi:<a href="https://doi.org/10.15479/AT-ISTA-22242">10.15479/AT-ISTA-22242</a>
  apa: Borovkov, M. (2026). Low-Noise Quantum Dots in Ultra-Shallow Ge/SiGe Heterostructures
    for Prototyping Hybrid Semiconducting-Superconducting Devices. Institute of Science
    and Technology Austria. <a href="https://doi.org/10.15479/AT-ISTA-22242">https://doi.org/10.15479/AT-ISTA-22242</a>
  chicago: Borovkov, Maksim. “Low-Noise Quantum Dots in Ultra-Shallow Ge/SiGe Heterostructures
    for Prototyping Hybrid Semiconducting-Superconducting Devices.” Institute of Science
    and Technology Austria, 2026. <a href="https://doi.org/10.15479/AT-ISTA-22242">https://doi.org/10.15479/AT-ISTA-22242</a>.
  ieee: M. Borovkov, “Low-Noise Quantum Dots in Ultra-Shallow Ge/SiGe Heterostructures
    for Prototyping Hybrid Semiconducting-Superconducting Devices.” Institute of Science
    and Technology Austria, 2026.
  ista: Borovkov M. 2026. Low-Noise Quantum Dots in Ultra-Shallow Ge/SiGe Heterostructures
    for Prototyping Hybrid Semiconducting-Superconducting Devices, Institute of Science
    and Technology Austria, <a href="https://doi.org/10.15479/AT-ISTA-22242">10.15479/AT-ISTA-22242</a>.
  mla: Borovkov, Maksim. <i>Low-Noise Quantum Dots in Ultra-Shallow Ge/SiGe Heterostructures
    for Prototyping Hybrid Semiconducting-Superconducting Devices</i>. Institute of
    Science and Technology Austria, 2026, doi:<a href="https://doi.org/10.15479/AT-ISTA-22242">10.15479/AT-ISTA-22242</a>.
  short: M. Borovkov, (2026).
contributor:
- contributor_type: contact_person
  first_name: Maksim
  id: 1fd0975f-8b61-11ed-b69e-d149334f28c5
  last_name: Borovkov
corr_author: '1'
date_created: 2026-07-04T17:32:27Z
date_published: 2026-07-04T00:00:00Z
date_updated: 2026-08-03T11:08:38Z
day: '04'
ddc:
- '530'
department:
- _id: GradSch
- _id: GeKa
doi: 10.15479/AT-ISTA-22242
doi_confirm: '1'
file:
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fulldoi: https://doi.org/10.15479/AT-ISTA-22242
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month: '07'
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oa_version: Published Version
project:
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  grant_number: '101115315'
  name: Quantum bits with Kitaev Transmons
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  name: Merging spin and superconducting qubits in planar Ge
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  name: Realization and Manipulation of a Planar hybrid superconducting Andreev spin
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  grant_number: PAT 7682124
  name: Superconducting spin qubits in planar Ge
publisher: Institute of Science and Technology Austria
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    url: https://github.com/ISTA-Nanoelectronics/noise_paper_public
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status: public
title: Low-Noise Quantum Dots in Ultra-Shallow Ge/SiGe Heterostructures for Prototyping
  Hybrid Semiconducting-Superconducting Devices
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: research_data
user_id: 68b8ca59-c5b3-11ee-8790-cd641c68093d
year: '2026'
...
