[{"department":[{"_id":"GradSch"}],"citation":{"mla":"Kopfová, Lenka, and Josef Tkadlec. “Colonization Times in Moran Process on Graphs.” <i>PLoS Computational Biology</i>, vol. 21, no. 5, Public Library of Science, 2025, p. e1012868, doi:<a href=\"https://doi.org/10.1371/journal.pcbi.1012868\">10.1371/journal.pcbi.1012868</a>.","apa":"Kopfová, L., &#38; Tkadlec, J. (2025). Colonization times in Moran process on graphs. <i>PLoS Computational Biology</i>. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pcbi.1012868\">https://doi.org/10.1371/journal.pcbi.1012868</a>","chicago":"Kopfová, Lenka, and Josef Tkadlec. “Colonization Times in Moran Process on Graphs.” <i>PLoS Computational Biology</i>. Public Library of Science, 2025. <a href=\"https://doi.org/10.1371/journal.pcbi.1012868\">https://doi.org/10.1371/journal.pcbi.1012868</a>.","ama":"Kopfová L, Tkadlec J. Colonization times in Moran process on graphs. <i>PLoS Computational Biology</i>. 2025;21(5):e1012868. doi:<a href=\"https://doi.org/10.1371/journal.pcbi.1012868\">10.1371/journal.pcbi.1012868</a>","ista":"Kopfová L, Tkadlec J. 2025. Colonization times in Moran process on graphs. PLoS Computational Biology. 21(5), e1012868.","short":"L. Kopfová, J. Tkadlec, PLoS Computational Biology 21 (2025) e1012868.","ieee":"L. Kopfová and J. Tkadlec, “Colonization times in Moran process on graphs,” <i>PLoS Computational Biology</i>, vol. 21, no. 5. Public Library of Science, p. e1012868, 2025."},"volume":21,"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"year":"2025","date_created":"2025-05-18T22:02:50Z","_id":"19702","oa":1,"date_updated":"2026-10-20T09:45:59Z","oa_version":"Published Version","status":"public","day":"01","arxiv":1,"publication":"PLoS Computational Biology","issue":"5","article_type":"original","language":[{"iso":"eng"}],"ddc":["000"],"file":[{"success":1,"creator":"dernst","file_size":6805943,"relation":"main_file","checksum":"73e35151eebd5064972c5a07ffdf2b69","content_type":"application/pdf","date_updated":"2025-05-19T07:45:31Z","date_created":"2025-05-19T07:45:31Z","file_name":"2025_PloSCompBio_Kopfova.pdf","access_level":"open_access","file_id":"19709"}],"external_id":{"arxiv":["2410.09476"],"isi":["001481670600002"]},"has_accepted_license":"1","publication_identifier":{"eissn":["1553-7358"]},"publication_status":"published","DOAJ_listed":"1","file_date_updated":"2025-05-19T07:45:31Z","abstract":[{"text":"Moran Birth-death process is a standard stochastic process that is used to model natural selection in spatially structured populations. A newly occurring mutation that invades a population of residents can either fixate on the whole population or it can go extinct due to random drift. The duration of the process depends not only on the total population size n, but also on the spatial structure of the population. In this work, we consider the Moran process with a single type of individuals who invade and colonize an otherwise empty environment. Mathematically, this corresponds to the setting where the residents have zero reproduction rate, thus they never reproduce. The spatial structure is represented by a graph. We present two main contributions. First, in contrast to the Moran process in which residents do reproduce, we show that the colonization time is always at most a polynomial function of the population size n. Namely, we show that colonization always takes at most 1/2n^3 - 1/2n^2 expected steps, and for each n, we identify the slowest graph where it takes exactly that many steps. Moreover, we establish a stronger bound of roughly n^2.5 steps for undirected graphs and an even stronger bound of roughly n^2 steps for so-called regular graphs. Second, we discuss various complications that one faces when attempting to measure fixation times and colonization times in spatially structured populations, and we propose to measure the real duration of the process, rather than counting the steps of the classic Moran process.","lang":"eng"}],"isi":1,"fulldoi":"https://doi.org/10.1371/journal.pcbi.1012868","type":"journal_article","author":[{"id":"17691681-50b9-11ef-ad56-edf4cacb21b0","last_name":"Kopfová","full_name":"Kopfová, Lenka","first_name":"Lenka"},{"orcid":"0000-0002-1097-9684","first_name":"Josef","full_name":"Tkadlec, Josef","last_name":"Tkadlec","id":"3F24CCC8-F248-11E8-B48F-1D18A9856A87"}],"month":"05","publisher":"Public Library of Science","intvolume":"        21","date_published":"2025-05-01T00:00:00Z","title":"Colonization times in Moran process on graphs","scopus_import":"1","page":"e1012868","OA_type":"gold","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","OA_place":"publisher","article_processing_charge":"Yes","doi":"10.1371/journal.pcbi.1012868","quality_controlled":"1"},{"publisher":"Zenodo","date_published":"2025-07-24T00:00:00Z","title":"BingqingCheng/cace-lr-fit: V0","ddc":["000"],"OA_type":"green","OA_place":"repository","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","doi":"10.5281/zenodo.16415060","article_processing_charge":"No","citation":{"apa":"Cheng, B., King, D., Kim, D., &#38; Zhong, P. (2025). BingqingCheng/cace-lr-fit: V0. Zenodo. <a href=\"https://doi.org/10.5281/zenodo.16415060\">https://doi.org/10.5281/zenodo.16415060</a>","mla":"Cheng, Bingqing, et al. <i>BingqingCheng/Cace-Lr-Fit: V0</i>. Zenodo, 2025, doi:<a href=\"https://doi.org/10.5281/zenodo.16415060\">10.5281/zenodo.16415060</a>.","ieee":"B. Cheng, D. King, D. Kim, and P. Zhong, “BingqingCheng/cace-lr-fit: V0.” Zenodo, 2025.","ama":"Cheng B, King D, Kim D, Zhong P. BingqingCheng/cace-lr-fit: V0. 2025. doi:<a href=\"https://doi.org/10.5281/zenodo.16415060\">10.5281/zenodo.16415060</a>","chicago":"Cheng, Bingqing, Daniel King, Dongjin Kim, and Peichen Zhong. “BingqingCheng/Cace-Lr-Fit: V0.” Zenodo, 2025. <a href=\"https://doi.org/10.5281/zenodo.16415060\">https://doi.org/10.5281/zenodo.16415060</a>.","ista":"Cheng B, King D, Kim D, Zhong P. 2025. BingqingCheng/cace-lr-fit: V0, Zenodo, <a href=\"https://doi.org/10.5281/zenodo.16415060\">10.5281/zenodo.16415060</a>.","short":"B. Cheng, D. King, D. Kim, P. Zhong, (2025)."},"department":[{"_id":"BiCh"}],"year":"2025","fulldoi":"https://doi.org/10.5281/zenodo.16415060","type":"research_data_reference","date_updated":"2026-10-20T09:48:08Z","main_file_link":[{"url":"https://doi.org/10.5281/zenodo.16415061","open_access":"1"}],"related_material":{"record":[{"id":"20452","status":"public","relation":"used_in_publication"}]},"_id":"22770","date_created":"2026-08-27T12:13:55Z","oa":1,"month":"07","author":[{"id":"cbe3cda4-d82c-11eb-8dc7-8ff94289fcc9","last_name":"Cheng","full_name":"Cheng, Bingqing","first_name":"Bingqing","orcid":"0000-0002-3584-9632"},{"first_name":"Daniel","full_name":"King, Daniel","last_name":"King"},{"last_name":"Kim","full_name":"Kim, Dongjin","first_name":"Dongjin"},{"last_name":"Zhong","first_name":"Peichen","full_name":"Zhong, Peichen"}],"status":"public","oa_version":"None","day":"24"},{"OA_place":"publisher","acknowledgement":"This publication is based upon work from COST Action CA18212 – Molecular Dynamics in the GAS phase (MD-GAS), supported by COST (European Cooperation in Science and Technology). This work was financially supported by the Slovenian Research Agency in the framework of research program P1-0112 Studies of Atoms, Molecules and Structures by Photons and Particles. Part of this work was financed by the European Research Council (ERC) through the Starting Grant No. 801770 (ANGULON). The authors acknowledge P. Lablanquie, H. Iwayama, F. Penent, K. Soejima and E. Shigemasa for sharing their unpublished experimental spectra on HCl.","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","dataavailabilitystatement":"Data for this article, including potential energy curves, Auger decay rates and spectral lines, are available at ZENODO at https://doi.org/10.5281/zenodo.13833475.","OA_type":"hybrid","corr_author":"1","quality_controlled":"1","doi":"10.1039/d4cp03727h","article_processing_charge":"Yes (via OA deal)","date_published":"2025-01-21T00:00:00Z","title":"Ab initio Auger spectrum of the ultrafast dissociating 2p3/2−1σ* resonance in HCl","intvolume":"        27","publisher":"Royal Society of Chemistry","scopus_import":"1","page":"1473-1482","author":[{"first_name":"Mateja","full_name":"Hrast, Mateja","id":"48dbb294-2a9c-11ef-905d-f56be71f0e5d","last_name":"Hrast"},{"full_name":"Ljubotina, Marko","first_name":"Marko","last_name":"Ljubotina","id":"F75EE9BE-5C90-11EA-905D-16643DDC885E","orcid":"0000-0003-0038-7068"},{"last_name":"Zitnik","full_name":"Zitnik, Matjaz","first_name":"Matjaz"}],"month":"01","researchdata_availability":"yes","related_material":{"record":[{"relation":"research_data","id":"18716","status":"public"},{"relation":"research_data","status":"public","id":"22866"}]},"ec_funded":1,"isi":1,"abstract":[{"lang":"eng","text":"We present an ab initio theoretical method to calculate the resonant Auger spectrum in the presence of ultrafast dissociation. The method is demonstrated by deriving the L-VV resonant Auger spectrum mediated by the 2p3/2−1σ* resonance in HCl, where the electronic Auger decay and nuclear dissociation occur on the same time scale. The Auger decay rates are calculated within the one-center approximation and are shown to vary significantly with the inter-nuclear distance. A quantum-mechanical description of dissociation is effectuated by propagating the corresponding Franck–Condon factors. The calculated profiles of Auger spectral lines resemble those of atomic Auger decay but here the characteristic tails extend towards lower electron kinetic energies, which reflect specific features of the potential energy curves. The presented method can describe the resonant Auger spectrum for an arbitrary speed of dissociation and simplifies to known approximations in the limiting cases."}],"file_date_updated":"2025-04-16T09:46:45Z","type":"journal_article","fulldoi":"https://doi.org/10.1039/d4cp03727h","pmid":1,"publication_identifier":{"issn":["1463-9076"]},"has_accepted_license":"1","das_tickbox":"1","publication_status":"published","supplementarymaterial":"no","license":"https://creativecommons.org/licenses/by-nc/3.0/","ddc":["530"],"language":[{"iso":"eng"}],"article_type":"original","issue":"3","external_id":{"pmid":["39698879"],"isi":["001379819100001"]},"file":[{"file_id":"19581","access_level":"open_access","file_name":"2025_PCCP_Hrast.pdf","date_created":"2025-04-16T09:46:45Z","content_type":"application/pdf","date_updated":"2025-04-16T09:46:45Z","checksum":"d035683179547b41b811107a8649aab0","file_size":1270582,"relation":"main_file","creator":"dernst","success":1}],"status":"public","oa_version":"Published Version","date_updated":"2026-10-21T07:56:55Z","_id":"18710","date_created":"2024-12-29T23:01:58Z","oa":1,"publication":"Physical Chemistry Chemical Physics","day":"21","tmp":{"name":"Creative Commons Attribution-NonCommercial 3.0 Unported (CC BY-NC 3.0)","image":"/images/cc_by_nc.png","legal_code_url":"https://creativecommons.org/licenses/by-nc/3.0/legalcode","short":"CC BY-NC (3.0)"},"volume":27,"citation":{"ieee":"M. Hrast, M. Ljubotina, and M. Zitnik, “Ab initio Auger spectrum of the ultrafast dissociating 2p3/2−1σ* resonance in HCl,” <i>Physical Chemistry Chemical Physics</i>, vol. 27, no. 3. Royal Society of Chemistry, pp. 1473–1482, 2025.","chicago":"Hrast, Mateja, Marko Ljubotina, and Matjaz Zitnik. “Ab Initio Auger Spectrum of the Ultrafast Dissociating 2p3/2−1σ* Resonance in HCl.” <i>Physical Chemistry Chemical Physics</i>. Royal Society of Chemistry, 2025. <a href=\"https://doi.org/10.1039/d4cp03727h\">https://doi.org/10.1039/d4cp03727h</a>.","short":"M. Hrast, M. Ljubotina, M. Zitnik, Physical Chemistry Chemical Physics 27 (2025) 1473–1482.","ama":"Hrast M, Ljubotina M, Zitnik M. Ab initio Auger spectrum of the ultrafast dissociating 2p3/2−1σ* resonance in HCl. <i>Physical Chemistry Chemical Physics</i>. 2025;27(3):1473-1482. doi:<a href=\"https://doi.org/10.1039/d4cp03727h\">10.1039/d4cp03727h</a>","ista":"Hrast M, Ljubotina M, Zitnik M. 2025. Ab initio Auger spectrum of the ultrafast dissociating 2p3/2−1σ* resonance in HCl. Physical Chemistry Chemical Physics. 27(3), 1473–1482.","mla":"Hrast, Mateja, et al. “Ab Initio Auger Spectrum of the Ultrafast Dissociating 2p3/2−1σ* Resonance in HCl.” <i>Physical Chemistry Chemical Physics</i>, vol. 27, no. 3, Royal Society of Chemistry, 2025, pp. 1473–82, doi:<a href=\"https://doi.org/10.1039/d4cp03727h\">10.1039/d4cp03727h</a>.","apa":"Hrast, M., Ljubotina, M., &#38; Zitnik, M. (2025). Ab initio Auger spectrum of the ultrafast dissociating 2p3/2−1σ* resonance in HCl. <i>Physical Chemistry Chemical Physics</i>. Royal Society of Chemistry. <a href=\"https://doi.org/10.1039/d4cp03727h\">https://doi.org/10.1039/d4cp03727h</a>"},"department":[{"_id":"MiLe"},{"_id":"MaSe"}],"project":[{"call_identifier":"H2020","grant_number":"801770","name":"Angulon: physics and applications of a new quasiparticle","_id":"2688CF98-B435-11E9-9278-68D0E5697425"}],"year":"2025"},{"day":"01","publication":"Journal of the European Academy of Dermatology and Venereology","oa_version":"Published Version","status":"public","_id":"17459","oa":1,"date_created":"2024-08-25T22:01:07Z","date_updated":"2026-10-21T07:59:34Z","year":"2025","volume":39,"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"department":[{"_id":"MiSi"}],"citation":{"ieee":"Y. Pan, M. Hochgerner, M. A. Cichon, T. Benezeder, T. Bieber, and P. Wolf, “Langerhans cells: Central players in the pathophysiology of atopic dermatitis,” <i>Journal of the European Academy of Dermatology and Venereology</i>, vol. 39, no. 2. Wiley, pp. 278–289, 2025.","chicago":"Pan, Yi, Mathias Hochgerner, Malgorzata Anna Cichon, Theresa Benezeder, Thomas Bieber, and Peter Wolf. “Langerhans Cells: Central Players in the Pathophysiology of Atopic Dermatitis.” <i>Journal of the European Academy of Dermatology and Venereology</i>. Wiley, 2025. <a href=\"https://doi.org/10.1111/jdv.20291\">https://doi.org/10.1111/jdv.20291</a>.","ista":"Pan Y, Hochgerner M, Cichon MA, Benezeder T, Bieber T, Wolf P. 2025. Langerhans cells: Central players in the pathophysiology of atopic dermatitis. Journal of the European Academy of Dermatology and Venereology. 39(2), 278–289.","ama":"Pan Y, Hochgerner M, Cichon MA, Benezeder T, Bieber T, Wolf P. Langerhans cells: Central players in the pathophysiology of atopic dermatitis. <i>Journal of the European Academy of Dermatology and Venereology</i>. 2025;39(2):278-289. doi:<a href=\"https://doi.org/10.1111/jdv.20291\">10.1111/jdv.20291</a>","short":"Y. Pan, M. Hochgerner, M.A. Cichon, T. Benezeder, T. Bieber, P. Wolf, Journal of the European Academy of Dermatology and Venereology 39 (2025) 278–289.","apa":"Pan, Y., Hochgerner, M., Cichon, M. A., Benezeder, T., Bieber, T., &#38; Wolf, P. (2025). Langerhans cells: Central players in the pathophysiology of atopic dermatitis. <i>Journal of the European Academy of Dermatology and Venereology</i>. Wiley. <a href=\"https://doi.org/10.1111/jdv.20291\">https://doi.org/10.1111/jdv.20291</a>","mla":"Pan, Yi, et al. “Langerhans Cells: Central Players in the Pathophysiology of Atopic Dermatitis.” <i>Journal of the European Academy of Dermatology and Venereology</i>, vol. 39, no. 2, Wiley, 2025, pp. 278–89, doi:<a href=\"https://doi.org/10.1111/jdv.20291\">10.1111/jdv.20291</a>."},"publication_status":"published","das_tickbox":"1","supplementarymaterial":"no","publication_identifier":{"eissn":["1468-3083"],"issn":["0926-9959"]},"pmid":1,"has_accepted_license":"1","external_id":{"pmid":["39157943"],"isi":["001292894900001"]},"file":[{"relation":"main_file","file_size":457698,"checksum":"12555ddb3490daf10b8d44e334e7312e","success":1,"creator":"dernst","access_level":"open_access","file_id":"19583","date_updated":"2025-04-16T09:59:37Z","content_type":"application/pdf","date_created":"2025-04-16T09:59:37Z","file_name":"2025_JEADV_Pan.pdf"}],"ddc":["570"],"issue":"2","article_type":"original","language":[{"iso":"eng"}],"author":[{"last_name":"Pan","full_name":"Pan, Yi","first_name":"Yi"},{"last_name":"Hochgerner","full_name":"Hochgerner, Mathias","first_name":"Mathias"},{"first_name":"Malgorzata Anna","full_name":"Cichon, Malgorzata Anna","last_name":"Cichon","id":"d63197a3-c188-11ed-9387-8d33a3f13871"},{"full_name":"Benezeder, Theresa","first_name":"Theresa","last_name":"Benezeder"},{"last_name":"Bieber","full_name":"Bieber, Thomas","first_name":"Thomas"},{"last_name":"Wolf","full_name":"Wolf, Peter","first_name":"Peter"}],"month":"02","researchdata_availability":"not applicable","type":"journal_article","fulldoi":"https://doi.org/10.1111/jdv.20291","isi":1,"file_date_updated":"2025-04-16T09:59:37Z","abstract":[{"lang":"eng","text":"Atopic dermatitis (AD) is the most common chronic inflammatory skin disease worldwide. AD is a highly complex disease with different subtypes. Many elements of AD pathophysiology have been described, but if/how they interact with each other or which mechanisms are important in which patients is still unclear. Langerhans cells (LCs) are antigen-presenting cells (APCs) in the epidermis. Depending on the context, they can act either pro- or anti-inflammatory. Many different studies have investigated LCs in the context of AD and found them to be connected to all major mechanisms of AD pathophysiology. As APCs, LCs recruit other immune cells and shape the immune response, especially adaptive immunity via polarization of T cells. As sentinel cells, LCs are primary sensors of the skin microbiome and are important for the decision of immunity versus tolerance. LCs are also involved with the integrity of the skin barrier by influencing tight junctions. Finally, LCs are important cells in the neuro-immune crosstalk in the skin. In this review, we provide an overview about the many different roles of LCs in AD. Understanding LCs might bring us closer to a more complete understanding of this highly complex disease. Potentially, modulating LCs might offer new options for targeted therapies for AD patients."}],"quality_controlled":"1","article_processing_charge":"Yes (in subscription journal)","doi":"10.1111/jdv.20291","acknowledgement":"This work was supported by the CK-CARE of the KühneFoundation, Switzerland; the China Scholarship Counciland Shanghai Biocelline Enterprise Co. Ltd, China.","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","OA_place":"publisher","OA_type":"hybrid","dataavailabilitystatement":"Data sharing not applicable to this article as no data sets were generated or analysed during the review.","page":"278-289","scopus_import":"1","intvolume":"        39","date_published":"2025-02-01T00:00:00Z","title":"Langerhans cells: Central players in the pathophysiology of atopic dermatitis","publisher":"Wiley"},{"date_updated":"2026-10-21T08:03:01Z","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2301.09217","open_access":"1"}],"_id":"15121","oa":1,"date_created":"2024-03-17T23:00:58Z","status":"public","oa_version":"Preprint","day":"01","arxiv":1,"publication":"Mathematical Programming","citation":{"mla":"Zheng, Da Wei, and Monika Henzinger. “Multiplicative Auction Algorithm for Approximate Maximum Weight Bipartite Matching.” <i>Mathematical Programming</i>, vol. 210, Springer Nature, 2025, pp. 881–94, doi:<a href=\"https://doi.org/10.1007/s10107-024-02066-3\">10.1007/s10107-024-02066-3</a>.","apa":"Zheng, D. W., &#38; Henzinger, M. (2025). Multiplicative auction algorithm for approximate maximum weight bipartite matching. <i>Mathematical Programming</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s10107-024-02066-3\">https://doi.org/10.1007/s10107-024-02066-3</a>","ieee":"D. W. Zheng and M. Henzinger, “Multiplicative auction algorithm for approximate maximum weight bipartite matching,” <i>Mathematical Programming</i>, vol. 210. Springer Nature, pp. 881–894, 2025.","chicago":"Zheng, Da Wei, and Monika Henzinger. “Multiplicative Auction Algorithm for Approximate Maximum Weight Bipartite Matching.” <i>Mathematical Programming</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1007/s10107-024-02066-3\">https://doi.org/10.1007/s10107-024-02066-3</a>.","short":"D.W. Zheng, M. Henzinger, Mathematical Programming 210 (2025) 881–894.","ama":"Zheng DW, Henzinger M. Multiplicative auction algorithm for approximate maximum weight bipartite matching. <i>Mathematical Programming</i>. 2025;210:881-894. doi:<a href=\"https://doi.org/10.1007/s10107-024-02066-3\">10.1007/s10107-024-02066-3</a>","ista":"Zheng DW, Henzinger M. 2025. Multiplicative auction algorithm for approximate maximum weight bipartite matching. Mathematical Programming. 210, 881–894."},"department":[{"_id":"MoHe"}],"volume":210,"year":"2025","project":[{"_id":"bd9ca328-d553-11ed-ba76-dc4f890cfe62","name":"The design and evaluation of modern fully dynamic data structures","call_identifier":"H2020","grant_number":"101019564"},{"grant_number":"P33775","_id":"bd9e3a2e-d553-11ed-ba76-8aa684ce17fe","name":"Fast Algorithms for a Reactive Network Layer"}],"publication_identifier":{"issn":["0025-5610"],"eissn":["1436-4646"]},"supplementarymaterial":"no","das_tickbox":"0","publication_status":"published","language":[{"iso":"eng"}],"article_type":"original","external_id":{"arxiv":["2301.09217"],"isi":["001176048100003"]},"related_material":{"record":[{"id":"13236","status":"public","relation":"earlier_version"}]},"researchdata_availability":"no","month":"03","author":[{"full_name":"Zheng, Da Wei","first_name":"Da Wei","last_name":"Zheng"},{"orcid":"0000-0002-5008-6530","first_name":"Monika H","full_name":"Henzinger, Monika H","last_name":"Henzinger","id":"540c9bbd-f2de-11ec-812d-d04a5be85630"}],"ec_funded":1,"abstract":[{"text":"We present an auction algorithm using multiplicative instead of constant weight updates to compute a (1-E)-approximate maximum weight matching (MWM) in a bipartite graph with n vertices and m edges in time 0(mE-1), beating the running time of the fastest known approximation algorithm of Duan and Pettie [JACM ’14] that runs in 0(mE-1 log E-1). Our algorithm is very simple and it can be extended to give a dynamic data structure that maintains a (1-E)-approximate maximum weight matching under (1) one-sided vertex deletions (with incident edges) and (2) one-sided vertex insertions (with incident edges sorted by weight) to the other side. The total time time used is 0(mE-1), where m is the sum of the number of initially existing and inserted edges.","lang":"eng"}],"isi":1,"fulldoi":"https://doi.org/10.1007/s10107-024-02066-3","type":"journal_article","OA_type":"green","OA_place":"repository","acknowledgement":"The first author thanks Chandra Chekuri for useful discussions about this paper. This work was done in part at the University of Vienna. This project has received funding from the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (Grant agreement No. 101019564 “The Design of Modern Fully Dynamic Data Structures (MoDynStruct)” and from the Austrian Science Fund (FWF) project “Fast Algorithms for a Reactive Network Layer (ReactNet)”, P 33775-N, with additional funding from the netidee SCIENCE Stiftung, 2020–2024.","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","doi":"10.1007/s10107-024-02066-3","article_processing_charge":"No","corr_author":"1","quality_controlled":"1","publisher":"Springer Nature","title":"Multiplicative auction algorithm for approximate maximum weight bipartite matching","date_published":"2025-03-01T00:00:00Z","intvolume":"       210","page":"881-894","scopus_import":"1"},{"title":"Nanoarchitecture of CaV>2.1 channels and GABAB receptors in the mouse hippocampus: Impact of APP/PS1 pathology","date_published":"2025-03-01T00:00:00Z","intvolume":"        35","publisher":"Wiley","scopus_import":"1","OA_place":"publisher","acknowledgement":"Funding sources were Spanish Ministerio de Economía y Competitividad, Junta de Comunidades de Castilla-La Mancha (Spain), Life Science Innovation Center at University of Fukui and German Research Foundation.\r\nGrants RTI2018-095812-B-I00 and PID2021-125875OB-I00 funded by MCIN/AEI/10.13039/501100011033 and by “ERDF A way of making Europe” to Rafael Luján. This study was also supported by a grant from Junta de Comunidades de Castilla-La Mancha (SBPLY/17/180501/000229 and SBPLY/21/180501/000064) and Universidad de Castilla-La Mancha (2023-GRIN-34187) to Rafael Luján, and Life Science Innovation Center (Research and Education Program for Life Science) at University of Fukui and JSPS KAKENHI Grant Numbers 16H04662, 17K19446, 18H05120 to Yugo Fukazawa and Margarita Salas fellowship from Ministerio de Universidades and Universidad de Castilla-La Mancha to Alejandro Martín-Belmonte. German Research Foundation (DFG FOR 2143) and BIOSS-2 to Akos Kulik.","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","dataavailabilitystatement":"All data used and/or analyzed during the current study are available from the corresponding author on reasonable request.","OA_type":"gold","quality_controlled":"1","doi":"10.1111/bpa.13279","article_processing_charge":"Yes","isi":1,"abstract":[{"lang":"eng","text":"Voltage-gated CaV2.1 (P/Q-type) Ca2+ channels play a crucial role in regulating neurotransmitter release, thus contributing to synaptic plasticity and to processes such as learning and memory. Despite their recognized importance in neural function, there is limited information on their potential involvement in neurodegenerative conditions such as Alzheimer's disease (AD). Here, we aimed to explore the impact of AD pathology on the density and nanoscale compartmentalization of CaV2.1 channels in the hippocampus in association with GABAB receptors. Histoblotting experiments showed that the density of CaV2.1 channel was significantly reduced in the hippocampus of APP/PS1 mice in a laminar-dependent manner. CaV2.1 channel was enriched in the active zone of the axon terminals and was present at a very low density over the surface of dendritic tree of the CA1 pyramidal cells, as shown by quantitative SDS-digested freeze-fracture replica labelling (SDS-FRL). In APP/PS1 mice, the density of CaV2.1 channel in the active zone was significantly reduced in the strata radiatum and lacunosum-moleculare, while it remained unaltered in the stratum oriens. The decline in Cav2.1 channel density was found to be associated with a corresponding impairment in the GABAergic synaptic function, as evidenced by electrophysiological experiments carried out in the hippocampus of APP/PS1 mice. Remarkably, double SDS-FRL showed a co-clustering of CaV2.1 channel and GABAB1 receptor in nanodomains (~40–50 nm) in wild type mice, while in APP/PS1 mice this nanoarchitecture was absent. Together, these findings suggest that the AD pathology-induced reduction in CaV2.1 channel density and CaV2.1-GABAB1 de-clustering may play a role in the synaptic transmission alterations shown in the AD hippocampus. Therefore, uncovering these layer-dependent changes in P/Q calcium currents associated with AD pathology can benefit the development of future strategies for AD management."}],"file_date_updated":"2025-04-16T09:56:08Z","DOAJ_listed":"1","type":"journal_article","fulldoi":"https://doi.org/10.1111/bpa.13279","month":"03","author":[{"first_name":"Alejandro","full_name":"Martín‐Belmonte, Alejandro","last_name":"Martín‐Belmonte"},{"last_name":"Aguado","first_name":"Carolina","full_name":"Aguado, Carolina"},{"full_name":"Alfaro‐Ruiz, Rocío","first_name":"Rocío","last_name":"Alfaro‐Ruiz"},{"first_name":"Akos","full_name":"Kulik, Akos","last_name":"Kulik"},{"last_name":"de la Ossa","first_name":"Luis","full_name":"de la Ossa, Luis"},{"last_name":"Moreno‐Martínez","full_name":"Moreno‐Martínez, Ana Esther","first_name":"Ana Esther"},{"last_name":"Alberquilla","full_name":"Alberquilla, Samuel","first_name":"Samuel"},{"full_name":"García‐Carracedo, Lucía","first_name":"Lucía","last_name":"García‐Carracedo"},{"last_name":"Fernández","full_name":"Fernández, Miriam","first_name":"Miriam"},{"last_name":"Fajardo‐Serrano","first_name":"Ana","full_name":"Fajardo‐Serrano, Ana"},{"full_name":"Aso, Ester","first_name":"Ester","last_name":"Aso"},{"orcid":"0000-0001-8761-9444","last_name":"Shigemoto","id":"499F3ABC-F248-11E8-B48F-1D18A9856A87","full_name":"Shigemoto, Ryuichi","first_name":"Ryuichi"},{"last_name":"Martín","first_name":"Eduardo D.","full_name":"Martín, Eduardo D."},{"last_name":"Fukazawa","full_name":"Fukazawa, Yugo","first_name":"Yugo"},{"last_name":"Ciruela","full_name":"Ciruela, Francisco","first_name":"Francisco"},{"full_name":"Luján, Rafael","first_name":"Rafael","last_name":"Luján"}],"researchdata_availability":"upon request","article_number":"e13279","ddc":["570"],"language":[{"iso":"eng"}],"article_type":"original","issue":"2","external_id":{"pmid":["38887180"],"isi":["001250034200001"]},"file":[{"file_id":"19582","access_level":"open_access","date_updated":"2025-04-16T09:56:08Z","content_type":"application/pdf","file_name":"2025_BrainPathology_MartinBelmonte.pdf","date_created":"2025-04-16T09:56:08Z","checksum":"75a172800ab2e949abb66fba97cf70f0","relation":"main_file","file_size":8767863,"success":1,"creator":"dernst"}],"pmid":1,"publication_identifier":{"issn":["1015-6305"],"eissn":["1750-3639"]},"has_accepted_license":"1","das_tickbox":"1","publication_status":"published","supplementarymaterial":"yes","license":"https://creativecommons.org/licenses/by-nc-nd/4.0/","tmp":{"name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","short":"CC BY-NC-ND (4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","image":"/images/cc_by_nc_nd.png"},"volume":35,"citation":{"mla":"Martín‐Belmonte, Alejandro, et al. “Nanoarchitecture of CaV&#62;2.1 Channels and GABAB Receptors in the Mouse Hippocampus: Impact of APP/PS1 Pathology.” <i>Brain Pathology</i>, vol. 35, no. 2, e13279, Wiley, 2025, doi:<a href=\"https://doi.org/10.1111/bpa.13279\">10.1111/bpa.13279</a>.","apa":"Martín‐Belmonte, A., Aguado, C., Alfaro‐Ruiz, R., Kulik, A., de la Ossa, L., Moreno‐Martínez, A. E., … Luján, R. (2025). Nanoarchitecture of CaV&#62;2.1 channels and GABAB receptors in the mouse hippocampus: Impact of APP/PS1 pathology. <i>Brain Pathology</i>. Wiley. <a href=\"https://doi.org/10.1111/bpa.13279\">https://doi.org/10.1111/bpa.13279</a>","ieee":"A. Martín‐Belmonte <i>et al.</i>, “Nanoarchitecture of CaV&#62;2.1 channels and GABAB receptors in the mouse hippocampus: Impact of APP/PS1 pathology,” <i>Brain Pathology</i>, vol. 35, no. 2. Wiley, 2025.","ista":"Martín‐Belmonte A, Aguado C, Alfaro‐Ruiz R, Kulik A, de la Ossa L, Moreno‐Martínez AE, Alberquilla S, García‐Carracedo L, Fernández M, Fajardo‐Serrano A, Aso E, Shigemoto R, Martín ED, Fukazawa Y, Ciruela F, Luján R. 2025. Nanoarchitecture of CaV&#62;2.1 channels and GABAB receptors in the mouse hippocampus: Impact of APP/PS1 pathology. Brain Pathology. 35(2), e13279.","ama":"Martín‐Belmonte A, Aguado C, Alfaro‐Ruiz R, et al. Nanoarchitecture of CaV&#62;2.1 channels and GABAB receptors in the mouse hippocampus: Impact of APP/PS1 pathology. <i>Brain Pathology</i>. 2025;35(2). doi:<a href=\"https://doi.org/10.1111/bpa.13279\">10.1111/bpa.13279</a>","chicago":"Martín‐Belmonte, Alejandro, Carolina Aguado, Rocío Alfaro‐Ruiz, Akos Kulik, Luis de la Ossa, Ana Esther Moreno‐Martínez, Samuel Alberquilla, et al. “Nanoarchitecture of CaV&#62;2.1 Channels and GABAB Receptors in the Mouse Hippocampus: Impact of APP/PS1 Pathology.” <i>Brain Pathology</i>. Wiley, 2025. <a href=\"https://doi.org/10.1111/bpa.13279\">https://doi.org/10.1111/bpa.13279</a>.","short":"A. Martín‐Belmonte, C. Aguado, R. Alfaro‐Ruiz, A. Kulik, L. de la Ossa, A.E. Moreno‐Martínez, S. Alberquilla, L. García‐Carracedo, M. Fernández, A. Fajardo‐Serrano, E. Aso, R. Shigemoto, E.D. Martín, Y. Fukazawa, F. Ciruela, R. Luján, Brain Pathology 35 (2025)."},"department":[{"_id":"RySh"}],"year":"2025","status":"public","oa_version":"Published Version","date_updated":"2026-10-21T08:30:00Z","oa":1,"_id":"17293","date_created":"2024-07-22T07:48:20Z","day":"01","publication":"Brain Pathology"},{"publisher":"Springer Nature","title":"Almost optimal upper bound for the ground state energy of a dilute Fermi gas via cluster expansion","date_published":"2025-01-01T00:00:00Z","intvolume":"        26","scopus_import":"1","page":"203-243","OA_type":"hybrid","OA_place":"publisher","acknowledgement":"Open access funding provided by Institute of Science and Technology (IST Austria).\r\nWe thank Alessandro Giuliani and Robert Seiringer for helpful discussions and Robert Seiringer for his comments on the manuscript. Financial support by the Austrian Science Fund (FWF) through Grant https://doi.org/10.55776/I6427 (as part of the SFB/TRR 352) is gratefully acknowledged.","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","doi":"10.1007/s00023-024-01450-1","article_processing_charge":"Yes (via OA deal)","PlanS_conform":"1","corr_author":"1","quality_controlled":"1","abstract":[{"lang":"eng","text":"We prove an upper bound on the energy density of the dilute spin-\\(\\frac {1}{2}\\) Fermi gas capturing the leading correction to the kinetic energy\\(8\\pi a\\rho _\\uparrow\\rho _\\downarrow\\) with an error of size smaller than\\(a\\rho^{2}(a^ 3\\rho)^{1/3-\\varepsilon}\\) for any\\(\\varepsilon> 0\\), where a denotes the scattering length of the interaction. The result is valid for a large class of interactions including interactions with a hard core. A central ingredient in the proof is a rigorous version of a fermionic cluster expansion adapted from the formal expansion of Gaudin et al. (Nucl Phys A 176(2):237–260, 1971. https://doi.org/10.1016/0375-9474(71)90267-3)."}],"file_date_updated":"2025-08-05T11:42:27Z","isi":1,"fulldoi":"https://doi.org/10.1007/s00023-024-01450-1","type":"journal_article","researchdata_availability":"no","related_material":{"record":[{"relation":"dissertation_contains","status":"public","id":"18135"}]},"author":[{"id":"e1a2682f-dc8d-11ea-abe3-81da9ac728f1","last_name":"Lauritsen","full_name":"Lauritsen, Asbjørn Bækgaard","first_name":"Asbjørn Bækgaard","orcid":"0000-0003-4476-2288"}],"month":"01","language":[{"iso":"eng"}],"article_type":"original","ddc":["510"],"file":[{"success":1,"creator":"dernst","relation":"main_file","file_size":797241,"checksum":"01b6572f55f721e97498522c85072ed2","date_updated":"2025-08-05T11:42:27Z","content_type":"application/pdf","file_name":"2025_AnnalesHenriPoincare_Lauritsen.pdf","date_created":"2025-08-05T11:42:27Z","access_level":"open_access","file_id":"20125"}],"external_id":{"isi":["001261197700002"],"pmid":["39926012"]},"has_accepted_license":"1","pmid":1,"publication_identifier":{"issn":["1424-0637"]},"supplementarymaterial":"no","das_tickbox":"0","publication_status":"published","citation":{"mla":"Lauritsen, Asbjørn Bækgaard. “Almost Optimal Upper Bound for the Ground State Energy of a Dilute Fermi Gas via Cluster Expansion.” <i>Annales Henri Poincare</i>, vol. 26, Springer Nature, 2025, pp. 203–43, doi:<a href=\"https://doi.org/10.1007/s00023-024-01450-1\">10.1007/s00023-024-01450-1</a>.","apa":"Lauritsen, A. B. (2025). Almost optimal upper bound for the ground state energy of a dilute Fermi gas via cluster expansion. <i>Annales Henri Poincare</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00023-024-01450-1\">https://doi.org/10.1007/s00023-024-01450-1</a>","ama":"Lauritsen AB. Almost optimal upper bound for the ground state energy of a dilute Fermi gas via cluster expansion. <i>Annales Henri Poincare</i>. 2025;26:203-243. doi:<a href=\"https://doi.org/10.1007/s00023-024-01450-1\">10.1007/s00023-024-01450-1</a>","ista":"Lauritsen AB. 2025. Almost optimal upper bound for the ground state energy of a dilute Fermi gas via cluster expansion. Annales Henri Poincare. 26, 203–243.","short":"A.B. Lauritsen, Annales Henri Poincare 26 (2025) 203–243.","chicago":"Lauritsen, Asbjørn Bækgaard. “Almost Optimal Upper Bound for the Ground State Energy of a Dilute Fermi Gas via Cluster Expansion.” <i>Annales Henri Poincare</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1007/s00023-024-01450-1\">https://doi.org/10.1007/s00023-024-01450-1</a>.","ieee":"A. B. Lauritsen, “Almost optimal upper bound for the ground state energy of a dilute Fermi gas via cluster expansion,” <i>Annales Henri Poincare</i>, vol. 26. Springer Nature, pp. 203–243, 2025."},"department":[{"_id":"RoSe"}],"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"volume":26,"year":"2025","project":[{"grant_number":"I06427","_id":"bda63fe5-d553-11ed-ba76-a16e3d2f256b","name":"Mathematical Challenges in BCS Theory of Superconductivity"}],"date_updated":"2026-10-21T08:28:52Z","date_created":"2024-07-14T22:01:12Z","_id":"17240","oa":1,"status":"public","oa_version":"Published Version","day":"01","publication":"Annales Henri Poincare"},{"related_material":{"record":[{"status":"public","id":"12109","relation":"part_of_dissertation"},{"status":"public","id":"19278","relation":"part_of_dissertation"},{"relation":"part_of_dissertation","id":"15322","status":"public"}]},"month":"08","author":[{"last_name":"Sobarzo Ponce","id":"4B807D68-AE37-11E9-AC72-31CAE5697425","first_name":"Juan Carlos A","full_name":"Sobarzo Ponce, Juan Carlos A"}],"ec_funded":1,"file_date_updated":"2025-08-28T08:19:07Z","supervisor":[{"id":"3A1FFC16-F248-11E8-B48F-1D18A9856A87","last_name":"Waitukaitis","full_name":"Waitukaitis, Scott R","first_name":"Scott R","orcid":"0000-0002-2299-3176"}],"abstract":[{"lang":"eng","text":"Tribocharging, or contact electrification, is the phenomenon in which two initially neutral materials exchange electric charge through contact and subsequent separation. While it is widely observed in everyday life and crucial to numerous natural processes, even the most basic aspects of tribocharging are still a mystery—what are the charge carriers involved and what drives their exchange? This work spans three separate projects that address different aspects of tribocharging. First, we introduce a novel strategy combining Finite Element Method (FEM) simulations with Kelvin Probe Force Microscopy (KPFM) to quantitatively extract surface charge density from surface voltage maps. Second, we present a simple theoretical model that allows for the existence of triboelectric cycles, under the assumption that multiple charge carrying species are involved. Third, we present experimental evidence that identical materials can spontaneously evolve into a triboelectric series, driven by contact history. Modeling this behavior enables the replication of experimental results with simulations, and even experimentally forcing the appearance of a pre-designed series by manipulating contact history. Together, the findings from these projects challenge traditional views on tribocharging, provide new tools for probing it, and open up new avenues of research—all with the hopes of bringing us closer to understanding this puzzling phenomenon."}],"fulldoi":"https://doi.org/10.15479/AT-ISTA-20203","type":"dissertation","user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","acknowledgement":"The project in Chapter 2 has received funding from the European Research Council (ERC) under\r\nthe European Union’s Horizon 2020 research and innovation programme (Grant Agreement\r\nNo. 949120).\r\nThe project in Chapter 3 has received funding from the European Research Council (ERC) under\r\nthe European Union’s Horizon 2020 research and innovation programme (Grant Agreement\r\nNo. 949120).\r\nThe project in Chapter 4 has received financing from the European Research Council grant\r\nagreement No. 949120 under the European Union’s Horizon 2020 research and innovation\r\nprogramme. The Analytical Instrumentation Center of the TU Wien acknowledges support by\r\nthe FFG project ‘ELSA’ under grant no. 884672. C.M.P. and M.O. acknowledge the state\r\nof Lower Austria and the European Regional Development Fund under grant no. WST3-F542638/004-2021.\r\n","OA_place":"publisher","article_processing_charge":"No","doi":"10.15479/AT-ISTA-20203","corr_author":"1","publisher":"Institute of Science and Technology Austria","date_published":"2025-08-27T00:00:00Z","title":"Tribocharging of identical insulators: Triboelectric series, triboelectric cycles and surface charges","page":"96","degree_awarded":"PhD","date_created":"2025-08-21T11:42:59Z","_id":"20203","oa":1,"date_updated":"2026-10-21T08:38:30Z","oa_version":"Published Version","doi_confirm":"1","status":"public","day":"27","department":[{"_id":"GradSch"},{"_id":"ScWa"}],"citation":{"mla":"Sobarzo Ponce, Juan Carlos A. <i>Tribocharging of Identical Insulators: Triboelectric Series, Triboelectric Cycles and Surface Charges</i>. Institute of Science and Technology Austria, 2025, doi:<a href=\"https://doi.org/10.15479/AT-ISTA-20203\">10.15479/AT-ISTA-20203</a>.","apa":"Sobarzo Ponce, J. C. A. (2025). <i>Tribocharging of identical insulators: Triboelectric series, triboelectric cycles and surface charges</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT-ISTA-20203\">https://doi.org/10.15479/AT-ISTA-20203</a>","ista":"Sobarzo Ponce JCA. 2025. Tribocharging of identical insulators: Triboelectric series, triboelectric cycles and surface charges. Institute of Science and Technology Austria.","chicago":"Sobarzo Ponce, Juan Carlos A. “Tribocharging of Identical Insulators: Triboelectric Series, Triboelectric Cycles and Surface Charges.” Institute of Science and Technology Austria, 2025. <a href=\"https://doi.org/10.15479/AT-ISTA-20203\">https://doi.org/10.15479/AT-ISTA-20203</a>.","ama":"Sobarzo Ponce JCA. Tribocharging of identical insulators: Triboelectric series, triboelectric cycles and surface charges. 2025. doi:<a href=\"https://doi.org/10.15479/AT-ISTA-20203\">10.15479/AT-ISTA-20203</a>","short":"J.C.A. Sobarzo Ponce, Tribocharging of Identical Insulators: Triboelectric Series, Triboelectric Cycles and Surface Charges, Institute of Science and Technology Austria, 2025.","ieee":"J. C. A. Sobarzo Ponce, “Tribocharging of identical insulators: Triboelectric series, triboelectric cycles and surface charges,” Institute of Science and Technology Austria, 2025."},"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"year":"2025","alternative_title":["ISTA Thesis"],"project":[{"_id":"0aa60e99-070f-11eb-9043-a6de6bdc3afa","name":"Tribocharge: a multi-scale approach to an enduring problem in physics","grant_number":"949120","call_identifier":"H2020"}],"has_accepted_license":"1","publication_identifier":{"isbn":["978-3-99078-062-6"],"issn":["2663-337X"]},"acknowledged_ssus":[{"_id":"M-Shop"},{"_id":"NanoFab"},{"_id":"EM-Fac"},{"_id":"LifeSc"},{"_id":"ScienComp"}],"publication_status":"published","language":[{"iso":"eng"}],"ddc":["530"],"file":[{"success":1,"creator":"jsobarzo","checksum":"661b9d3786cfc985be811befc3262bf5","relation":"main_file","file_size":12667200,"content_type":"application/pdf","date_updated":"2025-08-27T14:50:32Z","date_created":"2025-08-27T14:50:32Z","file_name":"2025_Sobarzo_JuanCarlos_Thesis.pdf","file_id":"20237","access_level":"open_access"},{"file_id":"20238","access_level":"closed","date_updated":"2025-08-28T08:19:07Z","content_type":"application/x-zip-compressed","date_created":"2025-08-27T14:50:32Z","file_name":"2025_Sobarzo_JuanCarlos_Thesis.zip","checksum":"ca2f24e6c3b55912982521707552a0f5","file_size":18940521,"relation":"source_file","creator":"jsobarzo"}]},{"has_accepted_license":"1","publication_identifier":{"issn":["2663-337X"],"isbn":["978-3-99078-071-8"]},"acknowledged_ssus":[{"_id":"Bio"},{"_id":"SSU"},{"_id":"LifeSc"},{"_id":"M-Shop"}],"publication_status":"published","das_tickbox":"1","language":[{"iso":"eng"}],"ddc":["541","543","542"],"file":[{"content_type":"application/vnd.openxmlformats-officedocument.wordprocessingml.document","date_updated":"2025-11-13T16:47:47Z","date_created":"2025-11-13T16:47:47Z","file_name":"2025_Mondal_Soumyadip_Thesis.docx","access_level":"closed","file_id":"20644","creator":"smondal","relation":"source_file","file_size":32589295,"checksum":"b5eed6a3dccb83cd2a8a22e11fd7d867"},{"file_size":5007370,"relation":"main_file","checksum":"89b1529e0a7b524f46624d73ecadf8cb","creator":"smondal","access_level":"closed","embargo_to":"open_access","file_id":"20645","embargo":"2026-11-13","file_name":"2025_Mondal_Soumyadip_Thesis.pdf","date_created":"2025-11-13T16:47:46Z","content_type":"application/pdf","date_updated":"2025-11-13T16:47:46Z"}],"_id":"20607","date_created":"2025-11-07T12:40:54Z","date_updated":"2026-10-21T10:25:04Z","doi_confirm":"1","oa_version":"Published Version","status":"public","day":"19","department":[{"_id":"GradSch"},{"_id":"StFr"}],"citation":{"ieee":"S. Mondal, “Oxygen and sulfur redox: Conversion kinetics and phase equilibria,” Institute of Science and Technology Austria, 2025.","ama":"Mondal S. Oxygen and sulfur redox: Conversion kinetics and phase equilibria. 2025. doi:<a href=\"https://doi.org/10.15479/AT-ISTA-20607\">10.15479/AT-ISTA-20607</a>","ista":"Mondal S. 2025. Oxygen and sulfur redox: Conversion kinetics and phase equilibria. Institute of Science and Technology Austria.","short":"S. Mondal, Oxygen and Sulfur Redox: Conversion Kinetics and Phase Equilibria, Institute of Science and Technology Austria, 2025.","chicago":"Mondal, Soumyadip. “Oxygen and Sulfur Redox: Conversion Kinetics and Phase Equilibria.” Institute of Science and Technology Austria, 2025. <a href=\"https://doi.org/10.15479/AT-ISTA-20607\">https://doi.org/10.15479/AT-ISTA-20607</a>.","apa":"Mondal, S. (2025). <i>Oxygen and sulfur redox: Conversion kinetics and phase equilibria</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT-ISTA-20607\">https://doi.org/10.15479/AT-ISTA-20607</a>","mla":"Mondal, Soumyadip. <i>Oxygen and Sulfur Redox: Conversion Kinetics and Phase Equilibria</i>. Institute of Science and Technology Austria, 2025, doi:<a href=\"https://doi.org/10.15479/AT-ISTA-20607\">10.15479/AT-ISTA-20607</a>."},"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"alternative_title":["ISTA Thesis"],"year":"2025","project":[{"_id":"8df062be-16d5-11f0-9cad-f559b6612c7e","name":"Singlet oxygen in non-aqueous oxygen redox chemistry","grant_number":"P37169"},{"_id":"5eaf4378-b033-11f1-b276-f928018a46c1","name":"Materials for Energy Conversion and Storage (Freunberger)","grant_number":"COE05"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","acknowledgement":"I gratefully acknowledge the support of the ISTA Graduate School and the Scientific Service Units of\r\nISTA, whose resources made this work possible—especially the Imaging & Optics Facility, the Lab\r\nSupport Facility, and the Miba Machine Shop. I would like to thank two staff scientists in particular:\r\nRobert Hauschild (Imaging & Optics Facility) and Daniel Balazs (Lab Support Facility), for their\r\nassistance and advice. My PhD was partially funded by the Austrian Science Fund (FWF)\r\n(10.55776/P37169 and 10.55776/COE5).","OA_place":"publisher","article_processing_charge":"No","doi":"10.15479/AT-ISTA-20607","corr_author":"1","publisher":"Institute of Science and Technology Austria","title":"Oxygen and sulfur redox: Conversion kinetics and phase equilibria","date_published":"2025-09-19T00:00:00Z","page":"71","degree_awarded":"PhD","related_material":{"record":[{"status":"public","id":"12065","relation":"part_of_dissertation"},{"relation":"part_of_dissertation","id":"20437","status":"deleted"},{"relation":"part_of_dissertation","status":"public","id":"13044"},{"status":"public","id":"14687","relation":"part_of_dissertation"}]},"month":"09","author":[{"first_name":"Soumyadip","full_name":"Mondal, Soumyadip","last_name":"Mondal","id":"d25d21ef-dc8d-11ea-abe3-ec4576307f48"}],"file_date_updated":"2025-11-13T16:47:47Z","supervisor":[{"full_name":"Freunberger, Stefan Alexander","first_name":"Stefan Alexander","id":"A8CA28E6-CE23-11E9-AD2D-EC27E6697425","last_name":"Freunberger","orcid":"0000-0003-2902-5319"}],"fulldoi":"https://doi.org/10.15479/AT-ISTA-20607","type":"dissertation"},{"ec_funded":1,"month":"12","author":[{"last_name":"Dawson","id":"31B4E2D0-F248-11E8-B48F-1D18A9856A87","first_name":"Erika","full_name":"Dawson, Erika"},{"first_name":"Michaela","full_name":"Hönigsberger, Michaela","last_name":"Hönigsberger","id":"953894f3-25bd-11ec-8556-f70a9d38ef60"},{"first_name":"Niklas","full_name":"Kampleitner, Niklas","last_name":"Kampleitner","id":"2AC57FAC-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Grasse, Anna V","first_name":"Anna V","id":"406F989C-F248-11E8-B48F-1D18A9856A87","last_name":"Grasse"},{"first_name":"Lukas","full_name":"Lindorfer, Lukas","last_name":"Lindorfer","id":"85f0e6d3-06b3-11ec-8982-8c5049fa4455"},{"first_name":"Jennifer","full_name":"Robb, Jennifer","last_name":"Robb","id":"7bc2734a-e2c6-11ea-9824-a2ed5f0662a8"},{"first_name":"Farnaz","full_name":"Beikzadeh Abbasi, Farnaz","id":"0344bfb9-3feb-11ee-87e9-c27edc800bcd","last_name":"Beikzadeh Abbasi"},{"id":"979E35EE-C996-11E9-8C7C-CF13E6697425","last_name":"Strahodinsky","first_name":"Florian","full_name":"Strahodinsky, Florian"},{"first_name":"Hanna","full_name":"Leitner, Hanna","id":"8fc5c6f6-5903-11ec-abad-c83f046253e7","last_name":"Leitner"},{"last_name":"Rajendran","id":"876b6b34-8ff4-11ec-97c9-8d95a7aae416","first_name":"Harikrishnan","full_name":"Rajendran, Harikrishnan"},{"first_name":"Thomas","full_name":"Schmitt, Thomas","last_name":"Schmitt"},{"orcid":"0000-0002-2193-3868","full_name":"Cremer, Sylvia","first_name":"Sylvia","last_name":"Cremer","id":"2F64EC8C-F248-11E8-B48F-1D18A9856A87"}],"related_material":{"record":[{"relation":"research_data","id":"20471","status":"public"}],"link":[{"url":"https://ista.ac.at/en/news/ants-signal-deadly-infection/","relation":"press_release","description":"News on ISTA website"}]},"researchdata_availability":"no","article_number":"10511","type":"journal_article","fulldoi":"https://doi.org/10.1038/s41467-025-66175-z","abstract":[{"text":"Sick individuals often conceal their disease status to group members, thereby preventing social exclusion or aggression. Here we show by behavioural, chemical, immunological and infection load analyses that sick ant pupae instead actively emit a chemical signal that in itself is sufficient to trigger their own destruction by colony members. In our experiments, this altruistic disease-signalling was performed only by worker but not queen pupae. The lack of signalling by queen pupae did not constitute cheating behaviour, but reflected their superior immune capabilities. Worker pupae suffered from extensive pathogen replication whereas queen pupae were able to restrain their infection. Our data suggest the evolution of a finely-tuned signalling system in which it is not the induction of an individual’s immune response, but rather its failure to overcome the infection, that triggers pupal signalling for sacrifice. This demonstrates a balanced interplay between individual and social immunity that efficiently achieves whole-colony health.","lang":"eng"}],"file_date_updated":"2025-12-15T13:30:33Z","DOAJ_listed":"1","corr_author":"1","quality_controlled":"1","doi":"10.1038/s41467-025-66175-z","PlanS_conform":"1","article_processing_charge":"Yes","OA_place":"publisher","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","acknowledgement":"We thank Joergen Eilenberg and Nicolai V. Meyling for the fungal strain, and the ISTA Social Immunity team, Jonghyun Park and Yuko Ulrich for ant collection. We also thank the Social Immunity team, in particular David Moreno Martínez, Tanvi Madaan, Wilfrid Jean Louis and Jessica Kirchner, for experimental and molecular support, as well as Friedrich Fochler for technical support with the chemical analysis, and the ISTA Lab Support Facility, including the mass spectrometry unit, for general and chemical laboratory support. We further thank Marco Ribezzi for advice on 13C calculations and Ernst Pittenauer for discussion of the chemical data, Chris Pull and Michael Sixt for project discussion, and the Social Immunity team for comments on the manuscript. The study was funded by the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation Programme (No. 771402; EPIDEMICSonCHIP) to SC.","OA_type":"gold","scopus_import":"1","title":"Altruistic disease signalling in ant colonies","date_published":"2025-12-01T00:00:00Z","intvolume":"        16","publisher":"Springer Nature","day":"01","publication":"Nature Communications","status":"public","oa_version":"Published Version","date_updated":"2026-10-21T10:53:39Z","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1101/2024.02.27.582277"}],"_id":"18892","oa":1,"date_created":"2025-01-27T11:28:05Z","project":[{"grant_number":"771402","call_identifier":"H2020","_id":"2649B4DE-B435-11E9-9278-68D0E5697425","name":"Epidemics in ant societies on a chip"},{"_id":"B67AFEDC-15C9-11EA-A837-991A96BB2854","name":"IST Austria Open Access Fund"}],"year":"2025","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"volume":16,"citation":{"ieee":"E. Dawson <i>et al.</i>, “Altruistic disease signalling in ant colonies,” <i>Nature Communications</i>, vol. 16. Springer Nature, 2025.","ista":"Dawson E, Hönigsberger M, Kampleitner N, Grasse AV, Lindorfer L, Robb J, Beikzadeh F, Strahodinsky F, Leitner H, Rajendran H, Schmitt T, Cremer S. 2025. Altruistic disease signalling in ant colonies. Nature Communications. 16, 10511.","ama":"Dawson E, Hönigsberger M, Kampleitner N, et al. Altruistic disease signalling in ant colonies. <i>Nature Communications</i>. 2025;16. doi:<a href=\"https://doi.org/10.1038/s41467-025-66175-z\">10.1038/s41467-025-66175-z</a>","chicago":"Dawson, Erika, Michaela Hönigsberger, Niklas Kampleitner, Anna V Grasse, Lukas Lindorfer, Jennifer Robb, Farnaz Beikzadeh, et al. “Altruistic Disease Signalling in Ant Colonies.” <i>Nature Communications</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1038/s41467-025-66175-z\">https://doi.org/10.1038/s41467-025-66175-z</a>.","short":"E. Dawson, M. Hönigsberger, N. Kampleitner, A.V. Grasse, L. Lindorfer, J. Robb, F. Beikzadeh, F. Strahodinsky, H. Leitner, H. Rajendran, T. Schmitt, S. Cremer, Nature Communications 16 (2025).","mla":"Dawson, Erika, et al. “Altruistic Disease Signalling in Ant Colonies.” <i>Nature Communications</i>, vol. 16, 10511, Springer Nature, 2025, doi:<a href=\"https://doi.org/10.1038/s41467-025-66175-z\">10.1038/s41467-025-66175-z</a>.","apa":"Dawson, E., Hönigsberger, M., Kampleitner, N., Grasse, A. V., Lindorfer, L., Robb, J., … Cremer, S. (2025). Altruistic disease signalling in ant colonies. <i>Nature Communications</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41467-025-66175-z\">https://doi.org/10.1038/s41467-025-66175-z</a>"},"department":[{"_id":"SyCr"},{"_id":"LifeSc"}],"das_tickbox":"0","publication_status":"published","supplementarymaterial":"no","acknowledged_ssus":[{"_id":"LifeSc"},{"_id":"MassSpec"}],"pmid":1,"publication_identifier":{"eissn":["2041-1723"]},"APC_amount":"7068 EUR","has_accepted_license":"1","external_id":{"pmid":["41330896"]},"file":[{"file_id":"20826","access_level":"open_access","content_type":"application/pdf","date_updated":"2025-12-15T13:30:33Z","file_name":"2025_NatureComm_Dawson.pdf","date_created":"2025-12-15T13:30:33Z","checksum":"06244623bb7611c636652ecbc4787889","file_size":805323,"relation":"main_file","success":1,"creator":"dernst"}],"ddc":["570"],"article_type":"original","language":[{"iso":"eng"}]},{"ec_funded":1,"related_material":{"record":[{"relation":"used_in_publication","status":"public","id":"18892"}]},"month":"10","author":[{"id":"2F64EC8C-F248-11E8-B48F-1D18A9856A87","last_name":"Cremer","full_name":"Cremer, Sylvia","first_name":"Sylvia","orcid":"0000-0002-2193-3868"}],"fulldoi":"https://doi.org/10.15479/AT-ISTA-20471","type":"research_data","contributor":[{"last_name":"Dawson","id":"31B4E2D0-F248-11E8-B48F-1D18A9856A87","first_name":"Erika"},{"id":"953894f3-25bd-11ec-8556-f70a9d38ef60","last_name":"Hönigsberger","first_name":"Michaela"},{"first_name":"Niklas","last_name":"Kampleitner","id":"2AC57FAC-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Anna V","id":"406F989C-F248-11E8-B48F-1D18A9856A87","last_name":"Grasse"},{"first_name":"Lukas","id":"85f0e6d3-06b3-11ec-8982-8c5049fa4455","last_name":"Lindorfer"},{"id":"7bc2734a-e2c6-11ea-9824-a2ed5f0662a8","last_name":"Robb","first_name":"Jennifer"},{"id":"0344bfb9-3feb-11ee-87e9-c27edc800bcd","last_name":"Beikzadeh Abbasi","first_name":"Farnaz"},{"first_name":"Florian","last_name":"Strahodinsky","id":"979E35EE-C996-11E9-8C7C-CF13E6697425"},{"id":"8fc5c6f6-5903-11ec-abad-c83f046253e7","last_name":"Leitner","first_name":"Hanna"},{"id":"876b6b34-8ff4-11ec-97c9-8d95a7aae416","last_name":"Rajendran","first_name":"Harikrishnan"},{"last_name":"Schmitt","first_name":"Thomas"},{"first_name":"Sylvia","last_name":"Cremer","id":"2F64EC8C-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-2193-3868"}],"abstract":[{"lang":"eng","text":"Sick individuals often conceal their disease status to group members, thereby preventing social exclusion or aggression. Here we show by behavioural, chemical, immunological and infection load analyses that sick ant pupae instead actively emit a chemical signal that in itself is sufficient to trigger their own destruction by colony members. In our experiments, this altruistic disease-signalling was performed only by worker but not queen pupae. The lack of signalling by queen pupae did not constitute cheating behaviour, but reflected their superior immune capabilities. Worker pupae suffered from extensive pathogen replication whereas queen pupae were able to restrain their infection. Our data suggest the evolution of a finely-tuned signalling system in which it is not the induction of an individual’s immune response, but rather its failure to overcome the infection, that triggers pupal signalling for sacrifice. This demonstrates a balanced interplay between individual and social immunity that efficiently achieves whole-colony health. "}],"file_date_updated":"2025-10-16T08:52:26Z","doi":"10.15479/AT-ISTA-20471","article_processing_charge":"No","corr_author":"1","keyword":["host-parasite interactions","social insects","social immunity","chemical communication","cooperation"],"user_id":"68b8ca59-c5b3-11ee-8790-cd641c68093d","acknowledgement":"We thank Joergen Eilenberg and Nicolai V. Meyling for the fungal strain, and the ISTA Social Immunity team, Jonghyun Park and Yuko Ulrich for ant collection. We also thank the Social Immunity team, in particular David Moreno Martínez, Tanvi Madaan, Wilfrid Jean Louis and Jessica Kirchner, for experimental and molecular support, as well as Friedrich Fochler for technical support with the chemical analysis, and the ISTA Lab Support Facility, including the mass spectrometry unit, for general and chemical laboratory support. We further thank Marco Ribezzi for advice on 13C calculations and Ernst Pittenauer for discussion of the chemical data, Chris Pull and Michael Sixt for project discussion and the Social Immunity team for comments on the manuscript. The study was funded by the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation Programme (No. 771402; EPIDEMICSonCHIP) to SC. ","publisher":"Institute of Science and Technology Austria","title":"Altruistic disease signalling in ant colonies","date_published":"2025-10-16T00:00:00Z","day":"16","date_updated":"2026-10-21T10:53:38Z","oa":1,"_id":"20471","date_created":"2025-10-16T09:02:16Z","status":"public","oa_version":"Published Version","year":"2025","project":[{"_id":"2649B4DE-B435-11E9-9278-68D0E5697425","name":"Epidemics in ant societies on a chip","call_identifier":"H2020","grant_number":"771402"}],"citation":{"apa":"Cremer, S. (2025). Altruistic disease signalling in ant colonies. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT-ISTA-20471\">https://doi.org/10.15479/AT-ISTA-20471</a>","mla":"Cremer, Sylvia. <i>Altruistic Disease Signalling in Ant Colonies</i>. Institute of Science and Technology Austria, 2025, doi:<a href=\"https://doi.org/10.15479/AT-ISTA-20471\">10.15479/AT-ISTA-20471</a>.","ieee":"S. Cremer, “Altruistic disease signalling in ant colonies.” Institute of Science and Technology Austria, 2025.","ama":"Cremer S. Altruistic disease signalling in ant colonies. 2025. doi:<a href=\"https://doi.org/10.15479/AT-ISTA-20471\">10.15479/AT-ISTA-20471</a>","ista":"Cremer S. 2025. Altruistic disease signalling in ant colonies, Institute of Science and Technology Austria, <a href=\"https://doi.org/10.15479/AT-ISTA-20471\">10.15479/AT-ISTA-20471</a>.","chicago":"Cremer, Sylvia. “Altruistic Disease Signalling in Ant Colonies.” Institute of Science and Technology Austria, 2025. <a href=\"https://doi.org/10.15479/AT-ISTA-20471\">https://doi.org/10.15479/AT-ISTA-20471</a>.","short":"S. Cremer, (2025)."},"department":[{"_id":"SyCr"}],"tmp":{"name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","short":"CC BY-NC-ND (4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","image":"/images/cc_by_nc_nd.png"},"has_accepted_license":"1","file":[{"creator":"scremer","success":1,"checksum":"01fbc46af38c4f72970fe2865d47a29b","file_size":620,"relation":"main_file","file_name":"Dawson_etal_README.txt","date_created":"2025-10-16T08:52:07Z","content_type":"text/plain","date_updated":"2025-10-16T08:52:07Z","file_id":"20474","access_level":"open_access"},{"relation":"main_file","file_size":942172,"checksum":"c3cfd7659e6fd4a6f4397ca5cd3318e7","creator":"scremer","success":1,"access_level":"open_access","file_id":"20475","file_name":"Dawson_etal_Mass_Spectra.pdf","date_created":"2025-10-16T08:52:12Z","content_type":"application/pdf","date_updated":"2025-10-16T08:52:12Z"},{"relation":"main_file","file_size":582129,"checksum":"e5ff8e8fdf2520d18d9f1d11c60c1117","success":1,"creator":"scremer","access_level":"open_access","file_id":"20476","content_type":"application/vnd.openxmlformats-officedocument.spreadsheetml.sheet","date_updated":"2025-10-16T08:52:26Z","file_name":"Dawson_etal_Peak_Areas.xlsx","date_created":"2025-10-16T08:52:26Z"}],"ddc":["570"]},{"scopus_import":"1","page":"1646-1660","publisher":"Cambridge University Press","intvolume":"       155","date_published":"2025-10-01T00:00:00Z","title":"Common valuations of division polynomials","PlanS_conform":"1","article_processing_charge":"Yes (via OA deal)","doi":"10.1017/prm.2024.7","quality_controlled":"1","corr_author":"1","OA_type":"hybrid","acknowledgement":"Silverman, and Paul Voutier for the comments on the earlier version of this paper. The first author acknowledges the support by Dioscuri programme initiated by the Max Planck Society, jointly managed with the National Science Centre (Poland), and mutually funded by the Polish Ministry of Science and Higher Education and the German Federal Ministry of Education and Research. The second author has been supported by MIUR (Italy) through PRIN 2017 ‘Geometric, algebraic and analytic methods in arithmetic’ and has received funding from the European Union's Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie Grant Agreement No. 101034413.","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","keyword":["Elliptic curves","Néron models","division polynomials","height functions","discrete valuation rings"],"OA_place":"publisher","fulldoi":"https://doi.org/10.1017/prm.2024.7","type":"journal_article","file_date_updated":"2025-12-30T06:45:47Z","abstract":[{"text":"In this note, we prove a formula for the cancellation exponent  kv,n between division polynomials  ψn  and  ϕn  associated with a sequence  {nP}n∈N of points on an elliptic curve  E  defined over a discrete valuation field  K. The formula greatly generalizes the previously known special cases and treats also the case of non-standard Kodaira types for non-perfect residue fields.","lang":"eng"}],"isi":1,"ec_funded":1,"researchdata_availability":"no","month":"10","author":[{"first_name":"Bartosz","full_name":"Naskręcki, Bartosz","last_name":"Naskręcki"},{"first_name":"Matteo","full_name":"Verzobio, Matteo","last_name":"Verzobio","id":"7aa8f170-131e-11ed-88e1-a9efd01027cb","orcid":"0000-0002-0854-0306"}],"file":[{"relation":"main_file","file_size":477624,"checksum":"c5ec6e29aca2fb4533cb95fac409a0b2","creator":"dernst","success":1,"access_level":"open_access","file_id":"20878","file_name":"2025_ProceedingsRoyalSocEdinburghA_Naskrecki.pdf","date_created":"2025-12-30T06:45:47Z","date_updated":"2025-12-30T06:45:47Z","content_type":"application/pdf"}],"external_id":{"isi":["001174907100001"],"arxiv":["2203.02015"]},"issue":"5","article_type":"original","language":[{"iso":"eng"}],"ddc":["510"],"supplementarymaterial":"no","publication_status":"published","das_tickbox":"0","has_accepted_license":"1","publication_identifier":{"eissn":["1473-7124"],"issn":["0308-2105"]},"year":"2025","project":[{"call_identifier":"H2020","grant_number":"101034413","name":"IST-BRIDGE: International postdoctoral program","_id":"fc2ed2f7-9c52-11eb-aca3-c01059dda49c"}],"department":[{"_id":"TiBr"}],"citation":{"apa":"Naskręcki, B., &#38; Verzobio, M. (2025). Common valuations of division polynomials. <i>Proceedings of the Royal Society of Edinburgh Section A: Mathematics</i>. Cambridge University Press. <a href=\"https://doi.org/10.1017/prm.2024.7\">https://doi.org/10.1017/prm.2024.7</a>","mla":"Naskręcki, Bartosz, and Matteo Verzobio. “Common Valuations of Division Polynomials.” <i>Proceedings of the Royal Society of Edinburgh Section A: Mathematics</i>, vol. 155, no. 5, Cambridge University Press, 2025, pp. 1646–60, doi:<a href=\"https://doi.org/10.1017/prm.2024.7\">10.1017/prm.2024.7</a>.","ieee":"B. Naskręcki and M. Verzobio, “Common valuations of division polynomials,” <i>Proceedings of the Royal Society of Edinburgh Section A: Mathematics</i>, vol. 155, no. 5. Cambridge University Press, pp. 1646–1660, 2025.","chicago":"Naskręcki, Bartosz, and Matteo Verzobio. “Common Valuations of Division Polynomials.” <i>Proceedings of the Royal Society of Edinburgh Section A: Mathematics</i>. Cambridge University Press, 2025. <a href=\"https://doi.org/10.1017/prm.2024.7\">https://doi.org/10.1017/prm.2024.7</a>.","ista":"Naskręcki B, Verzobio M. 2025. Common valuations of division polynomials. Proceedings of the Royal Society of Edinburgh Section A: Mathematics. 155(5), 1646–1660.","short":"B. Naskręcki, M. Verzobio, Proceedings of the Royal Society of Edinburgh Section A: Mathematics 155 (2025) 1646–1660.","ama":"Naskręcki B, Verzobio M. Common valuations of division polynomials. <i>Proceedings of the Royal Society of Edinburgh Section A: Mathematics</i>. 2025;155(5):1646-1660. doi:<a href=\"https://doi.org/10.1017/prm.2024.7\">10.1017/prm.2024.7</a>"},"volume":155,"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"arxiv":1,"day":"01","publication":"Proceedings of the Royal Society of Edinburgh Section A: Mathematics","oa":1,"_id":"12311","date_created":"2023-01-16T11:45:22Z","date_updated":"2026-10-21T11:01:35Z","oa_version":"Published Version","status":"public"},{"ddc":["510"],"language":[{"iso":"eng"}],"article_type":"original","external_id":{"isi":["001376740400001"],"arxiv":["2208.05422"]},"file":[{"date_updated":"2025-04-16T09:38:55Z","content_type":"application/pdf","date_created":"2025-04-16T09:38:55Z","file_name":"2025_MathAnnalen_Glas.pdf","access_level":"open_access","file_id":"19579","success":1,"creator":"dernst","relation":"main_file","file_size":650021,"checksum":"dcf57a8b01332c36e0cf2b0d1aeecb36"}],"publication_identifier":{"eissn":["1432-1807"],"issn":["0025-5831"]},"has_accepted_license":"1","das_tickbox":"1","publication_status":"published","supplementarymaterial":"no","volume":391,"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"citation":{"chicago":"Glas, Jakob, and Leonhard Hochfilzer. “On a Question of Davenport and Diagonal Cubic Forms over Fq(T).” <i>Mathematische Annalen</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1007/s00208-024-03035-z\">https://doi.org/10.1007/s00208-024-03035-z</a>.","ista":"Glas J, Hochfilzer L. 2025. On a question of Davenport and diagonal cubic forms over Fq(t). Mathematische Annalen. 391, 5485–5533.","short":"J. Glas, L. Hochfilzer, Mathematische Annalen 391 (2025) 5485–5533.","ama":"Glas J, Hochfilzer L. On a question of Davenport and diagonal cubic forms over Fq(t). <i>Mathematische Annalen</i>. 2025;391:5485-5533. doi:<a href=\"https://doi.org/10.1007/s00208-024-03035-z\">10.1007/s00208-024-03035-z</a>","ieee":"J. Glas and L. Hochfilzer, “On a question of Davenport and diagonal cubic forms over Fq(t),” <i>Mathematische Annalen</i>, vol. 391. Springer Nature, pp. 5485–5533, 2025.","apa":"Glas, J., &#38; Hochfilzer, L. (2025). On a question of Davenport and diagonal cubic forms over Fq(t). <i>Mathematische Annalen</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00208-024-03035-z\">https://doi.org/10.1007/s00208-024-03035-z</a>","mla":"Glas, Jakob, and Leonhard Hochfilzer. “On a Question of Davenport and Diagonal Cubic Forms over Fq(T).” <i>Mathematische Annalen</i>, vol. 391, Springer Nature, 2025, pp. 5485–533, doi:<a href=\"https://doi.org/10.1007/s00208-024-03035-z\">10.1007/s00208-024-03035-z</a>."},"department":[{"_id":"TiBr"}],"year":"2025","status":"public","oa_version":"Published Version","date_updated":"2026-10-21T11:06:30Z","_id":"18705","oa":1,"date_created":"2024-12-22T23:01:48Z","publication":"Mathematische Annalen","arxiv":1,"day":"01","date_published":"2025-04-01T00:00:00Z","title":"On a question of Davenport and diagonal cubic forms over Fq(t)","intvolume":"       391","publisher":"Springer Nature","page":"5485-5533","scopus_import":"1","OA_place":"publisher","acknowledgement":"Open Access funding enabled and organized by Projekt DEAL.\r\nThe authors would like to thank Tim Browning for suggesting this project. Further they are grateful for his and Damaris Schindler’s helpful comments. We would also like to thank Efthymios Sofos for bringing Davenport’s question to our attention and Keith Matthews for providing us with scanned copies of the original correspondence. Finally we would like to thank the reviewer for helpful comments.","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","dataavailabilitystatement":"Data sharing is not applicable to this article as no datasets were generated or analysed\r\nduring the current study.","OA_type":"hybrid","corr_author":"1","quality_controlled":"1","doi":"10.1007/s00208-024-03035-z","article_processing_charge":"Yes (via OA deal)","isi":1,"abstract":[{"lang":"eng","text":"Given a non-singular diagonal cubic hypersurface X⊂Pn−1 over Fq(t) with char(Fq)≠3, we show that the number of rational points of height at most |P| is O(|P|3+ε) for n=6 and O(|P|2+ε) for n=4. In fact, if n=4 and char(Fq)>3 we prove that the number of rational points away from any rational line contained in X is bounded by O(|P|3/2+ε). From the result in 6 variables we deduce weak approximation for diagonal cubic hypersurfaces for n≥7 over Fq(t) when char(Fq)>3 and handle Waring's problem for cubes in 7 variables over Fq(t) when char(Fq)≠3. Our results answer a question of Davenport regarding the number of solutions of bounded height to x31+x32+x33=x34+x35+x36 with xi∈Fq[t]."}],"file_date_updated":"2025-04-16T09:38:55Z","type":"journal_article","fulldoi":"https://doi.org/10.1007/s00208-024-03035-z","author":[{"first_name":"Jakob","full_name":"Glas, Jakob","last_name":"Glas","id":"d6423cba-dc74-11ea-a0a7-ee61689ff5fb"},{"first_name":"Leonhard","full_name":"Hochfilzer, Leonhard","last_name":"Hochfilzer"}],"month":"04","researchdata_availability":"not applicable","related_material":{"record":[{"status":"public","id":"18293","relation":"earlier_version"}]}},{"arxiv":1,"day":"01","publication":"Formal Methods in System Design","oa":1,"_id":"17094","date_created":"2024-06-02T22:00:57Z","date_updated":"2026-10-21T12:02:29Z","oa_version":"Published Version","status":"public","year":"2025","project":[{"_id":"62781420-2b32-11ec-9570-8d9b63373d4d","name":"Vigilant Algorithmic Monitoring of Software","grant_number":"101020093","call_identifier":"H2020"},{"grant_number":"F8502","name":"Interface Theory for Security and Privacy","_id":"34a1b658-11ca-11ed-8bc3-c75229f0241e"}],"department":[{"_id":"ToHe"}],"citation":{"apa":"Bartocci, E., Ferrere, T., Henzinger, T. A., Nickovic, D., &#38; Oliveira da Costa, A. (2025). Information-flow interfaces. <i>Formal Methods in System Design</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s10703-024-00447-0\">https://doi.org/10.1007/s10703-024-00447-0</a>","mla":"Bartocci, Ezio, et al. “Information-Flow Interfaces.” <i>Formal Methods in System Design</i>, vol. 66, Springer Nature, 2025, pp. 3–48, doi:<a href=\"https://doi.org/10.1007/s10703-024-00447-0\">10.1007/s10703-024-00447-0</a>.","ama":"Bartocci E, Ferrere T, Henzinger TA, Nickovic D, Oliveira da Costa A. Information-flow interfaces. <i>Formal Methods in System Design</i>. 2025;66:3-48. doi:<a href=\"https://doi.org/10.1007/s10703-024-00447-0\">10.1007/s10703-024-00447-0</a>","chicago":"Bartocci, Ezio, Thomas Ferrere, Thomas A Henzinger, Dejan Nickovic, and Ana Oliveira da Costa. “Information-Flow Interfaces.” <i>Formal Methods in System Design</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1007/s10703-024-00447-0\">https://doi.org/10.1007/s10703-024-00447-0</a>.","short":"E. Bartocci, T. Ferrere, T.A. Henzinger, D. Nickovic, A. Oliveira da Costa, Formal Methods in System Design 66 (2025) 3–48.","ista":"Bartocci E, Ferrere T, Henzinger TA, Nickovic D, Oliveira da Costa A. 2025. Information-flow interfaces. Formal Methods in System Design. 66, 3–48.","ieee":"E. Bartocci, T. Ferrere, T. A. Henzinger, D. Nickovic, and A. Oliveira da Costa, “Information-flow interfaces,” <i>Formal Methods in System Design</i>, vol. 66. Springer Nature, pp. 3–48, 2025."},"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"volume":66,"supplementarymaterial":"yes","publication_status":"published","das_tickbox":"1","has_accepted_license":"1","publication_identifier":{"issn":["0925-9856"],"eissn":["1572-8102"]},"file":[{"checksum":"244a71a916103b8ea08e9d0bab32bcd9","relation":"main_file","file_size":3860690,"success":1,"creator":"dernst","file_id":"20879","access_level":"open_access","content_type":"application/pdf","date_updated":"2025-12-30T06:50:12Z","file_name":"2025_FormalMethodsSysDesign_Bartocci.pdf","date_created":"2025-12-30T06:50:12Z"}],"external_id":{"arxiv":["2002.06465"],"isi":["001230084200001"]},"article_type":"original","language":[{"iso":"eng"}],"ddc":["000"],"ec_funded":1,"researchdata_availability":"not applicable","related_material":{"record":[{"status":"public","id":"11355","relation":"shorter_version"}]},"month":"05","author":[{"last_name":"Bartocci","first_name":"Ezio","full_name":"Bartocci, Ezio"},{"last_name":"Ferrere","id":"40960E6E-F248-11E8-B48F-1D18A9856A87","first_name":"Thomas","full_name":"Ferrere, Thomas","orcid":"0000-0001-5199-3143"},{"id":"40876CD8-F248-11E8-B48F-1D18A9856A87","last_name":"Henzinger","first_name":"Thomas A","full_name":"Henzinger, Thomas A","orcid":"0000-0002-2985-7724"},{"first_name":"Dejan","full_name":"Nickovic, Dejan","last_name":"Nickovic","id":"41BCEE5C-F248-11E8-B48F-1D18A9856A87"},{"orcid":"0000-0002-8741-5799","id":"f347ec37-6676-11ee-b395-a888cb7b4fb4","last_name":"Oliveira da Costa","full_name":"Oliveira da Costa, Ana","first_name":"Ana"}],"fulldoi":"https://doi.org/10.1007/s10703-024-00447-0","type":"journal_article","file_date_updated":"2025-12-30T06:50:12Z","abstract":[{"text":"Contract-based design is a promising methodology for taming the complexity of developing sophisticated systems. A formal contract distinguishes between assumptions, which are constraints that the designer of a component puts on the environments in which the component can be used safely, and guarantees, which are promises that the designer asks from the team that implements the component. A theory of formal contracts can be formalized as an interface theory, which supports the composition and refinement of both assumptions and guarantees. Although there is a rich landscape of contract-based design methods that address functional and extra-functional properties, we present the first interface theory designed to ensure system-wide security properties. Our framework provides a refinement relation and a composition operation that support both incremental design and independent implementability. We develop our theory for both stateless and stateful interfaces. Additionally, we introduce information-flow contracts where assumptions and guarantees are sets of flow relations. We use these contracts to illustrate how to enrich information-flow interfaces with a semantic view. We illustrate the applicability of our framework with two examples inspired by the automotive domain.","lang":"eng"}],"isi":1,"PlanS_conform":"1","article_processing_charge":"Yes (via OA deal)","doi":"10.1007/s10703-024-00447-0","quality_controlled":"1","corr_author":"1","OA_type":"hybrid","dataavailabilitystatement":"This manuscript has no associated data.\r\n\r\n","acknowledgement":"This project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No 956123 and it was funded in part by the Austrian Science Fund (FWF) project W1255-N23, by the Austrian FWF project ZK-35, by the FWF project SpyCoDe 10.55776/F85 and by the ERC-2020-AdG 101020093. This paper extends the text and the results of the manuscript published at FASE 2022 [1].","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","OA_place":"publisher","scopus_import":"1","page":"3-48","publisher":"Springer Nature","intvolume":"        66","title":"Information-flow interfaces","date_published":"2025-05-01T00:00:00Z"},{"publication_identifier":{"issn":["2663-337X"]},"has_accepted_license":"1","publication_status":"published","license":"https://creativecommons.org/licenses/by-nc-sa/4.0/","ddc":["516"],"language":[{"iso":"eng"}],"file":[{"creator":"gtasinat","file_size":2218562,"relation":"source_file","checksum":"ae097a515b9bb4d4b025ca854ae2ed76","file_name":"thesis-source.zip","date_created":"2025-09-11T12:24:12Z","date_updated":"2025-09-11T12:24:12Z","content_type":"application/x-zip-compressed","access_level":"closed","file_id":"20344"},{"date_updated":"2025-09-11T12:26:14Z","content_type":"application/pdf","date_created":"2025-09-11T12:26:14Z","file_name":"2025_Tasinato_Gianluca_Thesis.pdf","file_id":"20345","access_level":"open_access","success":1,"creator":"gtasinat","checksum":"04b2e016409e52167ce42b0eef839fbf","relation":"main_file","file_size":10071982}],"doi_confirm":"1","oa_version":"Published Version","status":"public","_id":"20339","oa":1,"date_created":"2025-09-10T12:17:55Z","date_updated":"2026-10-21T13:23:55Z","day":"10","tmp":{"name":"Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)","short":"CC BY-NC-SA (4.0)","image":"/images/cc_by_nc_sa.png","legal_code_url":"https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode"},"department":[{"_id":"GradSch"},{"_id":"UlWa"}],"citation":{"ieee":"G. Tasinato, “Topological methods in discrete geometry and theoretical computer science: Measure partitioning and constraint satisfaction problems,” Institute of Science and Technology Austria, 2025.","short":"G. Tasinato, Topological Methods in Discrete Geometry and Theoretical Computer Science: Measure Partitioning and Constraint Satisfaction Problems, Institute of Science and Technology Austria, 2025.","chicago":"Tasinato, Gianluca. “Topological Methods in Discrete Geometry and Theoretical Computer Science: Measure Partitioning and Constraint Satisfaction Problems.” Institute of Science and Technology Austria, 2025. <a href=\"https://doi.org/10.15479/AT-ISTA-20339\">https://doi.org/10.15479/AT-ISTA-20339</a>.","ista":"Tasinato G. 2025. Topological methods in discrete geometry and theoretical computer science: Measure partitioning and constraint satisfaction problems. Institute of Science and Technology Austria.","ama":"Tasinato G. Topological methods in discrete geometry and theoretical computer science: Measure partitioning and constraint satisfaction problems. 2025. doi:<a href=\"https://doi.org/10.15479/AT-ISTA-20339\">10.15479/AT-ISTA-20339</a>","mla":"Tasinato, Gianluca. <i>Topological Methods in Discrete Geometry and Theoretical Computer Science: Measure Partitioning and Constraint Satisfaction Problems</i>. Institute of Science and Technology Austria, 2025, doi:<a href=\"https://doi.org/10.15479/AT-ISTA-20339\">10.15479/AT-ISTA-20339</a>.","apa":"Tasinato, G. (2025). <i>Topological methods in discrete geometry and theoretical computer science: Measure partitioning and constraint satisfaction problems</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT-ISTA-20339\">https://doi.org/10.15479/AT-ISTA-20339</a>"},"year":"2025","alternative_title":["ISTA Thesis"],"user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","OA_place":"publisher","corr_author":"1","article_processing_charge":"No","doi":"10.15479/AT-ISTA-20339","date_published":"2025-09-10T00:00:00Z","title":"Topological methods in discrete geometry and theoretical computer science: Measure partitioning and constraint satisfaction problems","publisher":"Institute of Science and Technology Austria","degree_awarded":"PhD","page":"106","month":"09","author":[{"id":"0433290C-AF8F-11E9-A4C7-F729E6697425","last_name":"Tasinato","first_name":"Gianluca","full_name":"Tasinato, Gianluca"}],"related_material":{"record":[{"id":"20008","status":"public","relation":"part_of_dissertation"},{"status":"public","id":"19860","relation":"part_of_dissertation"},{"relation":"part_of_dissertation","id":"15168","status":"public"}]},"file_date_updated":"2025-09-11T12:26:14Z","supervisor":[{"orcid":"0000-0002-1494-0568","last_name":"Wagner","id":"36690CA2-F248-11E8-B48F-1D18A9856A87","full_name":"Wagner, Uli","first_name":"Uli"}],"abstract":[{"lang":"eng","text":"This thesis investigates the interplay between algebraic and topological methods and combinatorial problems, focusing on approximate graph colourings and mass partitioning. The unifying theme throughout the dissertation is the use of continuous maps and symmetry constraints to extract combinatorial insights.\r\n\r\nWe first explore approximate graph colouring problems and more generally promise constraint satisfaction problems. Using tools from equivariant topology in combination with the general theory of polymorphism of a promise constraint satisfaction problem, we establish hardness for specific types of approximations.\r\n\r\nIn the second part, we address mass partitioning problems, where one seeks to divide geometric objects or measures in Euclidean space into parts of equal size using hyperplanes. Employing techniques from topological combinatorics (configuration space/test map setup and Borsuk–Ulam type theorems), we both obtain a new equipartitioning result in the and provide a fast algorithm for computing equipartitioning of point sets in 3D.\r\n"}],"type":"dissertation","fulldoi":"https://doi.org/10.15479/AT-ISTA-20339"},{"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","acknowledgement":"Open access funding provided by Copenhagen University.","OA_place":"publisher","OA_type":"hybrid","quality_controlled":"1","article_processing_charge":"Yes (via OA deal)","doi":"10.1007/s00283-024-10358-x","intvolume":"        47","date_published":"2025-03-01T00:00:00Z","title":"Books, Hallways, and social butterflies: A note on sliding block puzzles","publisher":"Springer Nature","scopus_import":"1","page":"52-65","author":[{"full_name":"Brunck, Florestan R","first_name":"Florestan R","last_name":"Brunck","id":"6ab6e556-f394-11eb-9cf6-9dfb78f00d8d"},{"orcid":"0000-0002-4003-7567","id":"5fca0887-a1db-11eb-95d1-ca9d5e0453b3","last_name":"Kwan","full_name":"Kwan, Matthew Alan","first_name":"Matthew Alan"}],"month":"03","researchdata_availability":"no","isi":1,"file_date_updated":"2025-04-08T11:17:45Z","abstract":[{"text":"Interest in sliding block puzzles dates back to the 15-puzzle, seemingly invented by Noyes Chapman in 1874 (see [23] for an account of the fascinating history of the puzzle). The game consists of fifteen movable square blocks numbered \r\n and arranged within a \r\n square box, leaving one empty space (see Figure 1). The task at hand is to start from a given configuration of the numbered blocks and reach the desired target configuration, where the only allowed move is to slide a numbered block into an adjacent empty space. This task seemed to be unpredictably either very easy to accomplish, or completely impossible, and the puzzle turned into a worldwide sensation in the spring of 1880. A particularly challenging instance, known as the 13-15-14 puzzle, consisted of initial and target configurations that differed by a single swap (historically this swap involved the blocks labeled 14 and 15). The craze of this puzzle was such that it consistently made newspaper headlines in 1880, with an article in the New York Times lamenting that it was “threatening our free institutions” [23, p. 9]. Various prizes were offered for anyone who could solve this challenge, beginning with a $25 set of teeth and culminating with Sam Loyd’s famous $1,000 cash prize.","lang":"eng"}],"type":"journal_article","fulldoi":"https://doi.org/10.1007/s00283-024-10358-x","publication_identifier":{"issn":["0343-6993"]},"has_accepted_license":"1","publication_status":"published","das_tickbox":"0","supplementarymaterial":"no","ddc":["510"],"article_type":"original","language":[{"iso":"eng"}],"external_id":{"isi":["001318056000001"],"arxiv":["2303.09459"]},"file":[{"file_id":"19530","access_level":"open_access","date_created":"2025-04-08T11:17:45Z","file_name":"2025_MathIntelligencer_Brunck.pdf","content_type":"application/pdf","date_updated":"2025-04-08T11:17:45Z","checksum":"c932ebe45c460d4a73f5b2dcca643db1","relation":"main_file","file_size":1760643,"creator":"dernst","success":1}],"oa_version":"Published Version","status":"public","_id":"18157","oa":1,"date_created":"2024-09-29T22:01:38Z","date_updated":"2026-10-21T13:42:19Z","day":"01","publication":"Mathematical Intelligencer","arxiv":1,"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"volume":47,"department":[{"_id":"UlWa"},{"_id":"MaKw"}],"citation":{"ieee":"F. R. Brunck and M. A. Kwan, “Books, Hallways, and social butterflies: A note on sliding block puzzles,” <i>Mathematical Intelligencer</i>, vol. 47. Springer Nature, pp. 52–65, 2025.","chicago":"Brunck, Florestan R, and Matthew Alan Kwan. “Books, Hallways, and Social Butterflies: A Note on Sliding Block Puzzles.” <i>Mathematical Intelligencer</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1007/s00283-024-10358-x\">https://doi.org/10.1007/s00283-024-10358-x</a>.","ista":"Brunck FR, Kwan MA. 2025. Books, Hallways, and social butterflies: A note on sliding block puzzles. Mathematical Intelligencer. 47, 52–65.","ama":"Brunck FR, Kwan MA. Books, Hallways, and social butterflies: A note on sliding block puzzles. <i>Mathematical Intelligencer</i>. 2025;47:52-65. doi:<a href=\"https://doi.org/10.1007/s00283-024-10358-x\">10.1007/s00283-024-10358-x</a>","short":"F.R. Brunck, M.A. Kwan, Mathematical Intelligencer 47 (2025) 52–65.","mla":"Brunck, Florestan R., and Matthew Alan Kwan. “Books, Hallways, and Social Butterflies: A Note on Sliding Block Puzzles.” <i>Mathematical Intelligencer</i>, vol. 47, Springer Nature, 2025, pp. 52–65, doi:<a href=\"https://doi.org/10.1007/s00283-024-10358-x\">10.1007/s00283-024-10358-x</a>.","apa":"Brunck, F. R., &#38; Kwan, M. A. (2025). Books, Hallways, and social butterflies: A note on sliding block puzzles. <i>Mathematical Intelligencer</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00283-024-10358-x\">https://doi.org/10.1007/s00283-024-10358-x</a>"},"year":"2025"},{"type":"journal_article","fulldoi":"https://doi.org/10.1145/3748723","abstract":[{"text":"Currently, the best known tradeoff between approximation ratio and complexity for the Sparsest Cut problem is achieved by the algorithm in [Sherman, FOCS 2009]: it computes O(√(log n)/ε)-approximation using O(nε logO(1) n) maxflows for any ε∈[Θ(1/log n),Θ(1)]. It works by solving the SDP relaxation of [Arora-Rao-Vazirani, STOC 2004] using the Multiplicative Weights Update algorithm (MW) of [Arora-Kale, JACM 2016]. To implement one MW step, Sherman approximately solves a multicommodity flow problem using another application of MW. Nested MW steps are solved via a certain \"chaining\" algorithm that combines results of multiple calls to the maxflow algorithm. We present an alternative approach that avoids solving the multicommodity flow problem and instead computes \"violating paths\". This simplifies Sherman's algorithm by removing a need for a nested application of MW, and also allows parallelization: we show how to compute O(√(log n)/ε)-approximation via O(logO(1) n) maxflows using O(nε) processors. We also revisit Sherman's chaining algorithm, and present a simpler version together with a new analysis.","lang":"eng"}],"file_date_updated":"2026-01-21T09:38:09Z","month":"10","author":[{"full_name":"Kolmogorov, Vladimir","first_name":"Vladimir","id":"3D50B0BA-F248-11E8-B48F-1D18A9856A87","last_name":"Kolmogorov"}],"related_material":{"record":[{"relation":"shorter_version","id":"17236","status":"public"}]},"scopus_import":"1","page":"1-22","title":"A simpler and parallelizable O(√log n)-approximation algorithm for SPARSEST CUT","date_published":"2025-10-01T00:00:00Z","intvolume":"        21","publisher":"Association for Computing Machinery","corr_author":"1","quality_controlled":"1","doi":"10.1145/3748723","PlanS_conform":"1","article_processing_charge":"Yes (via OA deal)","OA_place":"publisher","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","OA_type":"hybrid","year":"2025","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"volume":21,"citation":{"short":"V. Kolmogorov, ACM Transactions on Algorithms 21 (2025) 1–22.","ama":"Kolmogorov V. A simpler and parallelizable O(√log n)-approximation algorithm for SPARSEST CUT. <i>ACM Transactions on Algorithms</i>. 2025;21(4):1-22. doi:<a href=\"https://doi.org/10.1145/3748723\">10.1145/3748723</a>","chicago":"Kolmogorov, Vladimir. “A Simpler and Parallelizable O(√log n)-Approximation Algorithm for SPARSEST CUT.” <i>ACM Transactions on Algorithms</i>. Association for Computing Machinery, 2025. <a href=\"https://doi.org/10.1145/3748723\">https://doi.org/10.1145/3748723</a>.","ista":"Kolmogorov V. 2025. A simpler and parallelizable O(√log n)-approximation algorithm for SPARSEST CUT. ACM Transactions on Algorithms. 21(4), 1–22.","ieee":"V. Kolmogorov, “A simpler and parallelizable O(√log n)-approximation algorithm for SPARSEST CUT,” <i>ACM Transactions on Algorithms</i>, vol. 21, no. 4. Association for Computing Machinery, pp. 1–22, 2025.","mla":"Kolmogorov, Vladimir. “A Simpler and Parallelizable O(√log n)-Approximation Algorithm for SPARSEST CUT.” <i>ACM Transactions on Algorithms</i>, vol. 21, no. 4, Association for Computing Machinery, 2025, pp. 1–22, doi:<a href=\"https://doi.org/10.1145/3748723\">10.1145/3748723</a>.","apa":"Kolmogorov, V. (2025). A simpler and parallelizable O(√log n)-approximation algorithm for SPARSEST CUT. <i>ACM Transactions on Algorithms</i>. Association for Computing Machinery. <a href=\"https://doi.org/10.1145/3748723\">https://doi.org/10.1145/3748723</a>"},"department":[{"_id":"VlKo"}],"arxiv":1,"day":"01","publication":"ACM Transactions on Algorithms","status":"public","oa_version":"Published Version","date_updated":"2026-10-21T13:45:27Z","oa":1,"_id":"21007","date_created":"2026-01-20T10:04:02Z","external_id":{"arxiv":["2307.00115"]},"file":[{"content_type":"application/pdf","date_updated":"2026-01-21T09:38:09Z","date_created":"2026-01-21T09:38:09Z","file_name":"2025_ACMToA_Kolmogorov.pdf","file_id":"21031","access_level":"open_access","success":1,"creator":"dernst","checksum":"4a80fdb1e3711b9a2768d2bb8f6d3b4e","relation":"main_file","file_size":2208302}],"ddc":["510"],"language":[{"iso":"eng"}],"article_type":"original","issue":"4","publication_status":"published","publication_identifier":{"eissn":["1549-6333"],"issn":["1549-6325"]},"has_accepted_license":"1"},{"project":[{"name":"Cavity electromechanics across a quantum phase transition","_id":"0aa3608a-070f-11eb-9043-e9cd8a2bd931","grant_number":"P33692"},{"name":"Surface Charge and Tunneling Multi-Mode Imaging","_id":"62843413-2b32-11ec-9570-c4ec6eabfae7","grant_number":"26088"}],"year":"2025","volume":25,"department":[{"_id":"AnHi"}],"citation":{"ieee":"D. Puglia, R. H. Odessey, P. Burns, N. Luhmann, S. Schmid, and A. P. Higginbotham, “Room temperature, cavity-free capacitive strong coupling to mechanical motion,” <i>Nano Letters</i>, vol. 25, no. 7. American Chemical Society, pp. 2749–2755, 2025.","ama":"Puglia D, Odessey RH, Burns P, Luhmann N, Schmid S, Higginbotham AP. Room temperature, cavity-free capacitive strong coupling to mechanical motion. <i>Nano Letters</i>. 2025;25(7):2749-2755. doi:<a href=\"https://doi.org/10.1021/acs.nanolett.4c05796\">10.1021/acs.nanolett.4c05796</a>","ista":"Puglia D, Odessey RH, Burns P, Luhmann N, Schmid S, Higginbotham AP. 2025. Room temperature, cavity-free capacitive strong coupling to mechanical motion. Nano Letters. 25(7), 2749–2755.","short":"D. Puglia, R.H. Odessey, P. Burns, N. Luhmann, S. Schmid, A.P. Higginbotham, Nano Letters 25 (2025) 2749–2755.","chicago":"Puglia, Denise, Rachel H Odessey, Peter Burns, Niklas Luhmann, Silvan Schmid, and Andrew P Higginbotham. “Room Temperature, Cavity-Free Capacitive Strong Coupling to Mechanical Motion.” <i>Nano Letters</i>. American Chemical Society, 2025. <a href=\"https://doi.org/10.1021/acs.nanolett.4c05796\">https://doi.org/10.1021/acs.nanolett.4c05796</a>.","apa":"Puglia, D., Odessey, R. H., Burns, P., Luhmann, N., Schmid, S., &#38; Higginbotham, A. P. (2025). Room temperature, cavity-free capacitive strong coupling to mechanical motion. <i>Nano Letters</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acs.nanolett.4c05796\">https://doi.org/10.1021/acs.nanolett.4c05796</a>","mla":"Puglia, Denise, et al. “Room Temperature, Cavity-Free Capacitive Strong Coupling to Mechanical Motion.” <i>Nano Letters</i>, vol. 25, no. 7, American Chemical Society, 2025, pp. 2749–55, doi:<a href=\"https://doi.org/10.1021/acs.nanolett.4c05796\">10.1021/acs.nanolett.4c05796</a>."},"arxiv":1,"day":"06","publication":"Nano Letters","oa_version":"Preprint","status":"public","oa":1,"_id":"19026","date_created":"2025-02-16T23:02:34Z","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2407.15314","open_access":"1"}],"date_updated":"2026-10-21T14:08:09Z","external_id":{"arxiv":["2407.15314"],"isi":["001415246000001"]},"issue":"7","article_type":"original","language":[{"iso":"eng"}],"publication_status":"published","acknowledged_ssus":[{"_id":"M-Shop"},{"_id":"NanoFab"}],"publication_identifier":{"issn":["1530-6984"],"eissn":["1530-6992"]},"type":"journal_article","fulldoi":"https://doi.org/10.1021/acs.nanolett.4c05796","isi":1,"abstract":[{"lang":"eng","text":"The back-action damping of mechanical motion by electromagnetic radiation is typically overwhelmed by internal loss channels unless demanding experimental ingredients such as superconducting resonators, high-quality optical cavities, or large magnetic fields are employed. Here we demonstrate the first room temperature, cavity-free, all-electric device where back-action damping exceeds internal loss, enabled by a mechanically compliant parallel-plate capacitor with a nanoscale plate separation and an aspect ratio exceeding 1,000. The device has 4 orders of magnitude lower insertion loss than a comparable commercial quartz crystal and achieves a position imprecision rivaling optical interferometers. With the help of a back-action isolation scheme, we observe radiative cooling of mechanical motion by a remote cryogenic load. This work provides a technologically accessible route to high-precision sensing, transduction, and signal processing."}],"month":"02","author":[{"orcid":"0000-0003-1144-2763","id":"4D495994-AE37-11E9-AC72-31CAE5697425","last_name":"Puglia","first_name":"Denise","full_name":"Puglia, Denise"},{"first_name":"Rachel H","full_name":"Odessey, Rachel H","id":"9a7a5123-8972-11ed-ae7b-dd1f2af457bd","last_name":"Odessey"},{"last_name":"Burns","first_name":"Peter","full_name":"Burns, Peter"},{"last_name":"Luhmann","first_name":"Niklas","full_name":"Luhmann, Niklas"},{"first_name":"Silvan","full_name":"Schmid, Silvan","last_name":"Schmid"},{"orcid":"0000-0003-2607-2363","last_name":"Higginbotham","id":"4AD6785A-F248-11E8-B48F-1D18A9856A87","first_name":"Andrew P","full_name":"Higginbotham, Andrew P"}],"related_material":{"record":[{"relation":"earlier_version","id":"18143","status":"public"}]},"page":"2749-2755","scopus_import":"1","intvolume":"        25","date_published":"2025-02-06T00:00:00Z","title":"Room temperature, cavity-free capacitive strong coupling to mechanical motion","publisher":"American Chemical Society","quality_controlled":"1","corr_author":"1","article_processing_charge":"No","doi":"10.1021/acs.nanolett.4c05796","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","acknowledgement":"We thank Carissa Kumar and Vibha Padmanabhan for assistance in comparing performance with devices across the literature. We thank Andrew Cleland for helpful comments on this work. We are grateful for support from the Miba Machine Shop and Nanofabrication facility at IST Austria. This work was supported by the Austrian FWF grant P33692–N and includes a recipient of a DOC Fellowship of the Austrian Academy of Sciences (DOC – No. 26088) at the Institute of Science and Technology, Austria.","OA_place":"repository","OA_type":"green"},{"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"volume":188,"department":[{"_id":"JiFr"},{"_id":"XiFe"}],"citation":{"short":"L. Rodriguez Solovey, L. Fiedler, M. Zou, C. Giannini, A. Monzer, D. Vladimirtsev, M. Randuch, Y. Yu, Z. Gelová, I. Verstraeten, J. Hajny, M. Chen, S. Tan, L. Hörmayer, L. Li, M.M. Marques-Bueno, Z. Quddoos, G. Molnar, I. Kulich, Y. Jaillais, J. Friml, Cell 188 (2025) 6138–6150.e17.","ista":"Rodriguez Solovey L, Fiedler L, Zou M, Giannini C, Monzer A, Vladimirtsev D, Randuch M, Yu Y, Gelová Z, Verstraeten I, Hajny J, Chen M, Tan S, Hörmayer L, Li L, Marques-Bueno MM, Quddoos Z, Molnar G, Kulich I, Jaillais Y, Friml J. 2025. ABP1/ABL3-TMK1 cell-surface auxin signaling targets PIN2-mediated auxin fluxes for root gravitropism. Cell. 188(22), 6138–6150.e17.","chicago":"Rodriguez Solovey, Lesia, Lukas Fiedler, Minxia Zou, Caterina Giannini, Aline Monzer, Dmitrii Vladimirtsev, Marek Randuch, et al. “ABP1/ABL3-TMK1 Cell-Surface Auxin Signaling Targets PIN2-Mediated Auxin Fluxes for Root Gravitropism.” <i>Cell</i>. Cell Press, 2025. <a href=\"https://doi.org/10.1016/j.cell.2025.08.026\">https://doi.org/10.1016/j.cell.2025.08.026</a>.","ama":"Rodriguez Solovey L, Fiedler L, Zou M, et al. ABP1/ABL3-TMK1 cell-surface auxin signaling targets PIN2-mediated auxin fluxes for root gravitropism. <i>Cell</i>. 2025;188(22):6138-6150.e17. doi:<a href=\"https://doi.org/10.1016/j.cell.2025.08.026\">10.1016/j.cell.2025.08.026</a>","ieee":"L. Rodriguez Solovey <i>et al.</i>, “ABP1/ABL3-TMK1 cell-surface auxin signaling targets PIN2-mediated auxin fluxes for root gravitropism,” <i>Cell</i>, vol. 188, no. 22. Cell Press, p. 6138–6150.e17, 2025.","apa":"Rodriguez Solovey, L., Fiedler, L., Zou, M., Giannini, C., Monzer, A., Vladimirtsev, D., … Friml, J. (2025). ABP1/ABL3-TMK1 cell-surface auxin signaling targets PIN2-mediated auxin fluxes for root gravitropism. <i>Cell</i>. Cell Press. <a href=\"https://doi.org/10.1016/j.cell.2025.08.026\">https://doi.org/10.1016/j.cell.2025.08.026</a>","mla":"Rodriguez Solovey, Lesia, et al. “ABP1/ABL3-TMK1 Cell-Surface Auxin Signaling Targets PIN2-Mediated Auxin Fluxes for Root Gravitropism.” <i>Cell</i>, vol. 188, no. 22, Cell Press, 2025, p. 6138–6150.e17, doi:<a href=\"https://doi.org/10.1016/j.cell.2025.08.026\">10.1016/j.cell.2025.08.026</a>."},"project":[{"name":"Cyclic nucleotides as second messengers in plants","_id":"8f347782-16d5-11f0-9cad-8c19706ee739","grant_number":"101142681"},{"grant_number":"I06123","name":"Peptide receptors for auxin canalization in Arabidopsis","_id":"bd76d395-d553-11ed-ba76-f678c14f9033"},{"grant_number":"ALTF 985-2016","name":"Cell surface receptor complexes for auxin signaling in plants","_id":"26060676-B435-11E9-9278-68D0E5697425"},{"grant_number":"291734","call_identifier":"FP7","name":"International IST Postdoc Fellowship Programme","_id":"25681D80-B435-11E9-9278-68D0E5697425"}],"year":"2025","oa_version":"Published Version","status":"public","oa":1,"_id":"20656","date_created":"2025-11-19T09:44:31Z","date_updated":"2026-10-22T09:15:44Z","publication":"Cell","day":"30","ddc":["580"],"issue":"22","article_type":"original","language":[{"iso":"eng"}],"external_id":{"pmid":["41043433"],"isi":["001616077900005"]},"file":[{"file_name":"2025_Cell_Rodriguez.pdf","date_created":"2025-11-24T10:55:18Z","content_type":"application/pdf","date_updated":"2025-11-24T10:55:18Z","file_id":"20679","access_level":"open_access","creator":"dernst","success":1,"checksum":"8ac396a0806ad7f2e4e7a0c1eed712ce","file_size":17825465,"relation":"main_file"}],"publication_identifier":{"issn":["0092-8674"]},"pmid":1,"has_accepted_license":"1","publication_status":"published","acknowledged_ssus":[{"_id":"Bio"},{"_id":"LifeSc"}],"isi":1,"file_date_updated":"2025-11-24T10:55:18Z","abstract":[{"lang":"eng","text":"Phytohormone auxin and its directional transport mediate much of the remarkably plastic development of higher plants. Positive feedback between auxin signaling and transport is a prerequisite for (1) self-organizing processes, including vascular tissue formation, and (2) directional growth responses such as gravitropism. Here, we identify a mechanism by which auxin signaling directly targets PIN auxin transporters. Via the cell-surface AUXIN-BINDING PROTEIN1 (ABP1)-TRANSMEMBRANE KINASE 1 (TMK1) receptor module, auxin rapidly induces phosphorylation and thus stabilization of PIN2. Following gravistimulation, initial auxin asymmetry activates autophosphorylation of the TMK1 kinase. This induces TMK1 interaction with and phosphorylation of PIN2, stabilizing PIN2 at the lower root side, thus reinforcing asymmetric auxin flow for root bending. Upstream of TMK1 in this regulation, ABP1 acts redundantly with the root-expressed ABP1-LIKE 3 (ABL3) auxin receptor. Such positive feedback between cell-surface auxin signaling and PIN-mediated polar auxin transport is fundamental for robust root gravitropism and presumably for other self-organizing developmental phenomena."}],"type":"journal_article","fulldoi":"https://doi.org/10.1016/j.cell.2025.08.026","author":[{"id":"3922B506-F248-11E8-B48F-1D18A9856A87","last_name":"Rodriguez Solovey","full_name":"Rodriguez Solovey, Lesia","first_name":"Lesia","orcid":"0000-0002-7244-7237"},{"full_name":"Fiedler, Lukas","first_name":"Lukas","id":"7c417475-8972-11ed-ae7b-8b674ca26986","last_name":"Fiedler"},{"first_name":"Minxia","full_name":"Zou, Minxia","id":"5c243f41-03f3-11ec-841c-96faf48a7ef9","last_name":"Zou"},{"last_name":"Giannini","id":"e3fdddd5-f6e0-11ea-865d-ca99ee6367f4","full_name":"Giannini, Caterina","first_name":"Caterina"},{"last_name":"Monzer","id":"2DB5D88C-D7B3-11E9-B8FD-7907E6697425","full_name":"Monzer, Aline","first_name":"Aline"},{"id":"60466724-5355-11ee-ae5a-fa55e8f99c3d","last_name":"Vladimirtsev","full_name":"Vladimirtsev, Dmitrii","first_name":"Dmitrii"},{"first_name":"Marek","full_name":"Randuch, Marek","id":"6ac4636d-15b2-11ec-abd3-fb8df79972ae","last_name":"Randuch"},{"full_name":"Yu, Yongfan","first_name":"Yongfan","last_name":"Yu"},{"orcid":"0000-0003-4783-1752","first_name":"Zuzana","full_name":"Gelová, Zuzana","id":"0AE74790-0E0B-11E9-ABC7-1ACFE5697425","last_name":"Gelová"},{"orcid":"0000-0001-7241-2328","full_name":"Verstraeten, Inge","first_name":"Inge","id":"362BF7FE-F248-11E8-B48F-1D18A9856A87","last_name":"Verstraeten"},{"orcid":"0000-0003-2140-7195","full_name":"Hajny, Jakub","first_name":"Jakub","last_name":"Hajny","id":"4800CC20-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Chen","first_name":"Meng","full_name":"Chen, Meng"},{"id":"2DE75584-F248-11E8-B48F-1D18A9856A87","last_name":"Tan","first_name":"Shutang","full_name":"Tan, Shutang","orcid":"0000-0002-0471-8285"},{"first_name":"Lukas","full_name":"Hörmayer, Lukas","last_name":"Hörmayer","id":"2EEE7A2A-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-8295-2926"},{"orcid":"0000-0002-5607-272X","id":"367EF8FA-F248-11E8-B48F-1D18A9856A87","last_name":"Li","full_name":"Li, Lanxin","first_name":"Lanxin"},{"full_name":"Marques-Bueno, Maria Mar","first_name":"Maria Mar","last_name":"Marques-Bueno"},{"first_name":"Zainab","full_name":"Quddoos, Zainab","id":"32ff3c64-04a0-11f0-a50f-d0c45bfac466","last_name":"Quddoos"},{"first_name":"Gergely","full_name":"Molnar, Gergely","id":"34F1AF46-F248-11E8-B48F-1D18A9856A87","last_name":"Molnar"},{"full_name":"Kulich, Ivan","first_name":"Ivan","id":"57a1567c-8314-11eb-9063-c9ddc3451a54","last_name":"Kulich"},{"first_name":"Yvon","full_name":"Jaillais, Yvon","last_name":"Jaillais"},{"id":"4159519E-F248-11E8-B48F-1D18A9856A87","last_name":"Friml","first_name":"Jiří","full_name":"Friml, Jiří","orcid":"0000-0002-8302-7596"}],"month":"10","related_material":{"record":[{"relation":"earlier_version","id":"19399","status":"public"},{"status":"public","id":"23145","relation":"dissertation_contains"}]},"ec_funded":1,"intvolume":"       188","date_published":"2025-10-30T00:00:00Z","title":"ABP1/ABL3-TMK1 cell-surface auxin signaling targets PIN2-mediated auxin fluxes for root gravitropism","publisher":"Cell Press","page":"6138-6150.e17","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","acknowledgement":"We gratefully acknowledge Tongda Xu for experimental, material, and conceptual support. We thank William Gray for providing material, Nataliia Gnyliukh and Ema Cervenova for help with manuscript preparation, and Julia Schmid for help with cloning. We thank Dolf Weijers, Mark Roosjen, and Andre Kuhn for discussions and support with phospho-proteomic analyses. We thank the Bioimaging and Life Science facilities at the Institute of Science and Technology Austria (ISTA) for their excellent service and assistance. The research leading to these results has received funding from the European Union (ERC, CYNIPS, 101142681) and Austrian Science Fund (FWF; I 6123-B) to J.F., and Y.J. was funded by ERC no. 3363360-APPL under FP/2007-2013. L.R. was supported by the FP7-PEOPLE-2011-COFUND ISTFELLOW program (IC1023FELL01) and the European Molecular Biology Organization (EMBO) long-term postdoctoral fellowship (ALTF 985-2016). S.T. was supported by the National Natural Science Foundation of China (32321001, 32570366). The work of J.H. was supported by the project JG_2024_003 implemented within the Palacký University Young Researcher Grant.","OA_place":"publisher","OA_type":"hybrid","quality_controlled":"1","corr_author":"1","article_processing_charge":"Yes (via OA deal)","PlanS_conform":"1","doi":"10.1016/j.cell.2025.08.026"},{"title":"Cytosolic Ca2+ as a universal signal for rapid root growth regulation","date_published":"2025-10-17T00:00:00Z","OA_type":"green","OA_place":"repository","acknowledgement":"We gratefully acknowledge Dr. Andrea Bleckmann, creator of pBLAX000 vector and Dr. Shiqiang Gao for donation of template used in XXM-ER cloning. This research was supported by the Laboratory Support Facility, the Plant Facility, the IT Facility and the Imaging and Optical Facility of the Institute of Science and Technology Austria. The graphical elements used in Fig. 5 were adapted and modified from Servier, https://smart.servier.com, and are used under CC BY 3.0 licence. The authors acknowledge the use of AI-tools (Microsoft Copilot, Gemini) for language refinement. All content was critically reviewed by authors.\r\n\r\nFunder Information Declared\r\nEuropean Research Council, 101142681 CYNIPS\r\nAustrian Science Fund, P 37051-B","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","doi":"10.1101/2025.10.17.683082","article_processing_charge":"No","corr_author":"1","abstract":[{"lang":"eng","text":"Roots must continuously adapt their growth and have evolved the ability to rapidly respond to diverse environmental and hormonal cues, including the phytohormone auxin. Auxin-induced cellular responses involve membrane depolarization, cytosolic calcium (Ca²⁺) elevation, and extracellular pH increase, but how these processes lead to rapid growth regulation remains unclear. Here, we show that cytosolic Ca²⁺ acts as a universal signal integrating diverse cues for rapid regulation of root growth. Using live imaging, microfluidics, and optogenetics in Arabidopsis, we demonstrate that a swift rise in cytosolic Ca²⁺ is the primary target of auxin signaling affecting growth inhibition. Disruption of Ca²⁺ influx abolishes these responses, whereas light-gated Ca²⁺ influx from the apoplast or endoplasmic reticulum stores inhibits growth. Multiple unrelated stimuli—including auxin, extracellular ATP, RALF peptides, and hydrogen peroxide—converge on this Ca²⁺-dependent mechanism. Cytosolic Ca²⁺ elevation thus represents a necessary and sufficient step for rapid growth inhibition, revealing a unifying principle of root signaling."}],"fulldoi":"https://doi.org/10.1101/2025.10.17.683082","type":"preprint","biorxivid":1,"related_material":{"record":[{"status":"public","id":"23145","relation":"dissertation_contains"}]},"month":"10","author":[{"first_name":"Marek","full_name":"Randuch, Marek","id":"6ac4636d-15b2-11ec-abd3-fb8df79972ae","last_name":"Randuch"},{"last_name":"Kulich","id":"57a1567c-8314-11eb-9063-c9ddc3451a54","full_name":"Kulich, Ivan","first_name":"Ivan"},{"full_name":"Vladimirtsev, Dmitrii","first_name":"Dmitrii","last_name":"Vladimirtsev","id":"60466724-5355-11ee-ae5a-fa55e8f99c3d"},{"first_name":"Shouguang","full_name":"Huang, Shouguang","last_name":"Huang"},{"last_name":"Hedrich","full_name":"Hedrich, Rainer","first_name":"Rainer"},{"last_name":"Friml","id":"4159519E-F248-11E8-B48F-1D18A9856A87","first_name":"Jiří","full_name":"Friml, Jiří","orcid":"0000-0002-8302-7596"}],"language":[{"iso":"eng"}],"external_id":{"biorxivid":["10.1101/2025.10.17.683082"]},"publication_status":"draft","citation":{"apa":"Randuch, M., Kulich, I., Vladimirtsev, D., Huang, S., Hedrich, R., &#38; Friml, J. (n.d.). Cytosolic Ca2+ as a universal signal for rapid root growth regulation. <i>bioRxiv</i>. <a href=\"https://doi.org/10.1101/2025.10.17.683082\">https://doi.org/10.1101/2025.10.17.683082</a>","mla":"Randuch, Marek, et al. “Cytosolic Ca2+ as a Universal Signal for Rapid Root Growth Regulation.” <i>BioRxiv</i>, doi:<a href=\"https://doi.org/10.1101/2025.10.17.683082\">10.1101/2025.10.17.683082</a>.","ama":"Randuch M, Kulich I, Vladimirtsev D, Huang S, Hedrich R, Friml J. Cytosolic Ca2+ as a universal signal for rapid root growth regulation. <i>bioRxiv</i>. doi:<a href=\"https://doi.org/10.1101/2025.10.17.683082\">10.1101/2025.10.17.683082</a>","short":"M. Randuch, I. Kulich, D. Vladimirtsev, S. Huang, R. Hedrich, J. Friml, BioRxiv (n.d.).","chicago":"Randuch, Marek, Ivan Kulich, Dmitrii Vladimirtsev, Shouguang Huang, Rainer Hedrich, and Jiří Friml. “Cytosolic Ca2+ as a Universal Signal for Rapid Root Growth Regulation.” <i>BioRxiv</i>, n.d. <a href=\"https://doi.org/10.1101/2025.10.17.683082\">https://doi.org/10.1101/2025.10.17.683082</a>.","ista":"Randuch M, Kulich I, Vladimirtsev D, Huang S, Hedrich R, Friml J. Cytosolic Ca2+ as a universal signal for rapid root growth regulation. bioRxiv, <a href=\"https://doi.org/10.1101/2025.10.17.683082\">10.1101/2025.10.17.683082</a>.","ieee":"M. Randuch, I. Kulich, D. Vladimirtsev, S. Huang, R. Hedrich, and J. Friml, “Cytosolic Ca2+ as a universal signal for rapid root growth regulation,” <i>bioRxiv</i>. ."},"department":[{"_id":"JiFr"}],"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"year":"2025","project":[{"name":"Cyclic nucleotides as second messengers in plants","_id":"8f347782-16d5-11f0-9cad-8c19706ee739","grant_number":"101142681"},{"grant_number":"P37051","name":"Guanylate cyclase activity of TIR1/AFBs auxin receptors","_id":"7bcece63-9f16-11ee-852c-ae94e099eeb6"}],"main_file_link":[{"open_access":"1","url":"https://doi.org/10.1101/2025.10.17.683082"}],"date_updated":"2026-10-22T09:15:44Z","date_created":"2026-10-19T11:44:48Z","_id":"23174","oa":1,"status":"public","oa_version":"Preprint","publication":"bioRxiv","day":"17"}]