[{"OA_type":"closed access","project":[{"_id":"62781420-2b32-11ec-9570-8d9b63373d4d","call_identifier":"H2020","name":"Vigilant Algorithmic Monitoring of Software","grant_number":"101020093"},{"_id":"34a1b658-11ca-11ed-8bc3-c75229f0241e","name":"Interface Theory for Security and Privacy","grant_number":"F8502"}],"date_updated":"2025-09-08T14:47:22Z","intvolume":"     15234","language":[{"iso":"eng"}],"ec_funded":1,"citation":{"ieee":"M. Chalupa, T. A. Henzinger, and A. Oliveira da Costa, “Monitoring extended hypernode logic,” in <i>Integrated Formal Methods</i>, 2024, vol. 15234, pp. 151–171.","ista":"Chalupa M, Henzinger TA, Oliveira da Costa A. 2024. Monitoring extended hypernode logic. Integrated Formal Methods. , LNCS, vol. 15234, 151–171.","ama":"Chalupa M, Henzinger TA, Oliveira da Costa A. Monitoring extended hypernode logic. In: <i>Integrated Formal Methods</i>. Vol 15234. Springer Nature; 2024:151-171. doi:<a href=\"https://doi.org/10.1007/978-3-031-76554-4_9\">10.1007/978-3-031-76554-4_9</a>","apa":"Chalupa, M., Henzinger, T. A., &#38; Oliveira da Costa, A. (2024). Monitoring extended hypernode logic. In <i>Integrated Formal Methods</i> (Vol. 15234, pp. 151–171). Springer Nature. <a href=\"https://doi.org/10.1007/978-3-031-76554-4_9\">https://doi.org/10.1007/978-3-031-76554-4_9</a>","short":"M. Chalupa, T.A. Henzinger, A. Oliveira da Costa, in:, Integrated Formal Methods, Springer Nature, 2024, pp. 151–171.","mla":"Chalupa, Marek, et al. “Monitoring Extended Hypernode Logic.” <i>Integrated Formal Methods</i>, vol. 15234, Springer Nature, 2024, pp. 151–71, doi:<a href=\"https://doi.org/10.1007/978-3-031-76554-4_9\">10.1007/978-3-031-76554-4_9</a>.","chicago":"Chalupa, Marek, Thomas A Henzinger, and Ana Oliveira da Costa. “Monitoring Extended Hypernode Logic.” In <i>Integrated Formal Methods</i>, 15234:151–71. Springer Nature, 2024. <a href=\"https://doi.org/10.1007/978-3-031-76554-4_9\">https://doi.org/10.1007/978-3-031-76554-4_9</a>."},"external_id":{"isi":["001416640500009"]},"status":"public","abstract":[{"lang":"eng","text":"Hypernode logic can reason about the prefix relation on stutter-reduced finite traces through the stutter-reduced prefix predicate. We increase the expressiveness of hypernode logic in two ways. First, we split the stutter-reduced prefix predicate into an explicit stutter-reduction operator and the classical prefix predicate on words. This change gives hypernode logic the ability to combine synchronous and asynchronous reasoning by explicitly stating which parts of traces can stutter. Second, we allow the use of regular expressions in formulas to reason about the structure of traces. This change enables hypernode logic to describe a mixture of trace properties and hyperproperties.\r\n\r\nWe show how to translate extended hypernode logic formulas into multi-track automata, which are automata that read multiple input words. Then we describe a fully online monitoring algorithm for monitoring k-safety hyperproperties specified in the logic. We have implemented the monitoring algorithm, and evaluated it on monitoring synchronous and asynchronous versions of observational determinism, and on checking the privacy preservation by compiler optimizations."}],"type":"conference","corr_author":"1","publication":"Integrated Formal Methods","oa_version":"None","date_created":"2024-12-01T23:01:52Z","scopus_import":"1","month":"11","volume":15234,"publication_status":"published","year":"2024","page":"151-171","author":[{"first_name":"Marek","last_name":"Chalupa","id":"87e34708-d6c6-11ec-9f5b-9391e7be2463","full_name":"Chalupa, Marek"},{"last_name":"Henzinger","first_name":"Thomas A","orcid":"0000-0002-2985-7724","id":"40876CD8-F248-11E8-B48F-1D18A9856A87","full_name":"Henzinger, Thomas A"},{"orcid":"0000-0002-8741-5799","first_name":"Ana","last_name":"Oliveira da Costa","full_name":"Oliveira da Costa, Ana","id":"f347ec37-6676-11ee-b395-a888cb7b4fb4"}],"alternative_title":["LNCS"],"publisher":"Springer Nature","doi":"10.1007/978-3-031-76554-4_9","acknowledgement":"This work was supported in part by the ERC-2020-AdG 101020093, and by the Austrian Science Fund (FWF) SFB project SpyCoDe F8502.","isi":1,"date_published":"2024-11-13T00:00:00Z","_id":"18599","quality_controlled":"1","department":[{"_id":"ToHe"}],"day":"13","title":"Monitoring extended hypernode logic","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","publication_identifier":{"issn":["0302-9743"],"eissn":["1611-3349"],"isbn":["9783031765537"]},"article_processing_charge":"No"},{"page":"90-146","alternative_title":["LNCS"],"author":[{"full_name":"Andriushchenko, Roman","last_name":"Andriushchenko","first_name":"Roman"},{"full_name":"Bork, Alexander","first_name":"Alexander","last_name":"Bork"},{"full_name":"Budde, Carlos E.","last_name":"Budde","first_name":"Carlos E."},{"full_name":"Češka, Milan","last_name":"Češka","first_name":"Milan"},{"last_name":"Grover","first_name":"Kush","full_name":"Grover, Kush"},{"full_name":"Hahn, Ernst Moritz","last_name":"Hahn","first_name":"Ernst Moritz"},{"last_name":"Hartmanns","first_name":"Arnd","full_name":"Hartmanns, Arnd"},{"last_name":"Israelsen","first_name":"Bryant","full_name":"Israelsen, Bryant"},{"first_name":"Nils","last_name":"Jansen","full_name":"Jansen, Nils"},{"first_name":"Joshua","last_name":"Jeppson","full_name":"Jeppson, Joshua"},{"first_name":"Sebastian","last_name":"Junges","full_name":"Junges, Sebastian"},{"first_name":"Maximilian A.","last_name":"Köhl","full_name":"Köhl, Maximilian A."},{"first_name":"Bettina","last_name":"Könighofer","full_name":"Könighofer, Bettina"},{"full_name":"Kretinsky, Jan","id":"44CEF464-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-8122-2881","first_name":"Jan","last_name":"Kretinsky"},{"orcid":"0000-0002-1712-2165","first_name":"Tobias","last_name":"Meggendorfer","full_name":"Meggendorfer, Tobias","id":"b21b0c15-30a2-11eb-80dc-f13ca25802e1"},{"full_name":"Parker, David","last_name":"Parker","first_name":"David"},{"full_name":"Pranger, Stefan","first_name":"Stefan","last_name":"Pranger"},{"first_name":"Tim","last_name":"Quatmann","full_name":"Quatmann, Tim"},{"last_name":"Ruijters","first_name":"Enno","full_name":"Ruijters, Enno"},{"first_name":"Landon","last_name":"Taylor","full_name":"Taylor, Landon"},{"full_name":"Volk, Matthias","last_name":"Volk","first_name":"Matthias"},{"last_name":"Weininger","first_name":"Maximilian","full_name":"Weininger, Maximilian","id":"02ab0197-cc70-11ed-ab61-918e71f56881"},{"last_name":"Zhang","first_name":"Zhen","full_name":"Zhang, Zhen"}],"volume":14550,"month":"11","year":"2024","publication_status":"published","language":[{"iso":"eng"}],"citation":{"chicago":"Andriushchenko, Roman, Alexander Bork, Carlos E. Budde, Milan Češka, Kush Grover, Ernst Moritz Hahn, Arnd Hartmanns, et al. “Tools at the Frontiers of Quantitative Verification: QComp 2023 Competition Report.” In <i>TOOLympics Challenge 2023</i>, 14550:90–146. Springer Nature, 2024. <a href=\"https://doi.org/10.1007/978-3-031-67695-6_4\">https://doi.org/10.1007/978-3-031-67695-6_4</a>.","apa":"Andriushchenko, R., Bork, A., Budde, C. E., Češka, M., Grover, K., Hahn, E. M., … Zhang, Z. (2024). Tools at the Frontiers of Quantitative Verification: QComp 2023 Competition Report. In <i>TOOLympics Challenge 2023</i> (Vol. 14550, pp. 90–146). Springer Nature. <a href=\"https://doi.org/10.1007/978-3-031-67695-6_4\">https://doi.org/10.1007/978-3-031-67695-6_4</a>","ista":"Andriushchenko R, Bork A, Budde CE, Češka M, Grover K, Hahn EM, Hartmanns A, Israelsen B, Jansen N, Jeppson J, Junges S, Köhl MA, Könighofer B, Kretinsky J, Meggendorfer T, Parker D, Pranger S, Quatmann T, Ruijters E, Taylor L, Volk M, Weininger M, Zhang Z. 2024. Tools at the Frontiers of Quantitative Verification: QComp 2023 Competition Report. TOOLympics Challenge 2023. , LNCS, vol. 14550, 90–146.","ieee":"R. Andriushchenko <i>et al.</i>, “Tools at the Frontiers of Quantitative Verification: QComp 2023 Competition Report,” in <i>TOOLympics Challenge 2023</i>, 2024, vol. 14550, pp. 90–146.","ama":"Andriushchenko R, Bork A, Budde CE, et al. Tools at the Frontiers of Quantitative Verification: QComp 2023 Competition Report. In: <i>TOOLympics Challenge 2023</i>. Vol 14550. Springer Nature; 2024:90-146. doi:<a href=\"https://doi.org/10.1007/978-3-031-67695-6_4\">10.1007/978-3-031-67695-6_4</a>","mla":"Andriushchenko, Roman, et al. “Tools at the Frontiers of Quantitative Verification: QComp 2023 Competition Report.” <i>TOOLympics Challenge 2023</i>, vol. 14550, Springer Nature, 2024, pp. 90–146, doi:<a href=\"https://doi.org/10.1007/978-3-031-67695-6_4\">10.1007/978-3-031-67695-6_4</a>.","short":"R. Andriushchenko, A. Bork, C.E. Budde, M. Češka, K. Grover, E.M. Hahn, A. Hartmanns, B. Israelsen, N. Jansen, J. Jeppson, S. Junges, M.A. Köhl, B. Könighofer, J. Kretinsky, T. Meggendorfer, D. Parker, S. Pranger, T. Quatmann, E. Ruijters, L. Taylor, M. Volk, M. Weininger, Z. Zhang, in:, TOOLympics Challenge 2023, Springer Nature, 2024, pp. 90–146."},"type":"conference","main_file_link":[{"url":" https://doi.org/10.48550/arXiv.2405.13583","open_access":"1"}],"publication":"TOOLympics Challenge 2023","scopus_import":"1","oa_version":"Preprint","date_created":"2024-12-01T23:01:53Z","status":"public","external_id":{"arxiv":["2405.13583"],"isi":["001434957500004"]},"abstract":[{"text":"The analysis of formal models that include quantitative aspects such as timing or probabilistic choices is performed by quantitative verification tools. Broad and mature tool support is available for computing basic properties such as expected rewards on basic models such as Markov chains. Previous editions of QComp, the comparison of tools for the analysis of quantitative formal models, focused on this setting. Many application scenarios, however, require more advanced property types such as LTL and parameter synthesis queries as well as advanced models like stochastic games and partially observable MDPs. For these, tool support is in its infancy today. This paper presents the outcomes of QComp 2023: a survey of the state of the art in quantitative verification tool support for advanced property types and models. With tools ranging from first research prototypes to well-supported integrations into established toolsets, this report highlights today’s active areas and tomorrow’s challenges in tool-focused research for quantitative verification.","lang":"eng"}],"OA_type":"green","intvolume":"     14550","OA_place":"repository","arxiv":1,"date_updated":"2025-09-08T14:45:11Z","article_processing_charge":"No","publication_identifier":{"issn":["0302-9743"],"eissn":["1611-3349"],"isbn":["9783031676949"]},"day":"01","department":[{"_id":"KrCh"}],"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","title":"Tools at the Frontiers of Quantitative Verification: QComp 2023 Competition Report","oa":1,"date_published":"2024-11-01T00:00:00Z","_id":"18600","quality_controlled":"1","doi":"10.1007/978-3-031-67695-6_4","acknowledgement":"The authors are ordered alphabetically. This work was supported by DFG RTG 2236/2 (UnRAVeL) and DFG project TRR 248 (CPEC, ID 389792660), by the EU under MSCA grant agreements 101008233 (MISSION), 101034413 (IST-BRIDGE), and 101067199 (ProSVED), by ERC Starting Grant 101077178 (DEUCE), ERC Consolidator Grant 864075 (CAESAR), and ERC Advanced Grant 834115 (FUN2MODEL), by GAČR grant GA23-06963S (VESCAA), by National Science Foundation grant 1856733, by NextGenerationEU project D53D23008400006 (SMARTITUDE), and by NWO VENI grant 639.021.754.","isi":1,"publisher":"Springer Nature"},{"has_accepted_license":"1","external_id":{"pmid":["39580488"],"isi":["001362684200001"]},"status":"public","abstract":[{"text":"Semiconductor quantum dots (QDs) in planar germanium (Ge) heterostructures have emerged as front-runners for future hole-based quantum processors. Here, we present strong coupling between a hole charge qubit, defined in a double quantum dot (DQD) in planar Ge, and microwave photons in a high-impedance (Zr = 1.3 kΩ) resonator based on an array of superconducting quantum interference devices (SQUIDs). Our investigation reveals vacuum-Rabi splittings with coupling strengths up to g0/2π = 260 MHz, and a cooperativity of C ~ 100, dependent on DQD tuning. Furthermore, utilizing the frequency tunability of our resonator, we explore the quenched energy splitting associated with strong Coulomb correlation effects in Ge QDs. The observed enhanced coherence of the strongly correlated excited state signals the presence of distinct symmetries within related spin functions, serving as a precursor to the strong coupling between photons and spin-charge hybrid qubits in planar Ge. This work paves the way towards coherent quantum connections between remote hole qubits in planar Ge, required to scale up hole-based quantum processors.","lang":"eng"}],"type":"journal_article","date_created":"2024-12-01T23:01:53Z","scopus_import":"1","oa_version":"Published Version","publication":"Nature Communications","language":[{"iso":"eng"}],"DOAJ_listed":"1","citation":{"apa":"De Palma, F., Oppliger, F., Jang, W., Bosco, S., Janik, M., Calcaterra, S., … Scarlino, P. (2024). Strong hole-photon coupling in planar Ge for probing charge degree and strongly correlated states. <i>Nature Communications</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41467-024-54520-7\">https://doi.org/10.1038/s41467-024-54520-7</a>","ieee":"F. De Palma <i>et al.</i>, “Strong hole-photon coupling in planar Ge for probing charge degree and strongly correlated states,” <i>Nature Communications</i>, vol. 15. Springer Nature, 2024.","ista":"De Palma F, Oppliger F, Jang W, Bosco S, Janik M, Calcaterra S, Katsaros G, Isella G, Loss D, Scarlino P. 2024. Strong hole-photon coupling in planar Ge for probing charge degree and strongly correlated states. Nature Communications. 15, 10177.","ama":"De Palma F, Oppliger F, Jang W, et al. Strong hole-photon coupling in planar Ge for probing charge degree and strongly correlated states. <i>Nature Communications</i>. 2024;15. doi:<a href=\"https://doi.org/10.1038/s41467-024-54520-7\">10.1038/s41467-024-54520-7</a>","mla":"De Palma, Franco, et al. “Strong Hole-Photon Coupling in Planar Ge for Probing Charge Degree and Strongly Correlated States.” <i>Nature Communications</i>, vol. 15, 10177, Springer Nature, 2024, doi:<a href=\"https://doi.org/10.1038/s41467-024-54520-7\">10.1038/s41467-024-54520-7</a>.","short":"F. De Palma, F. Oppliger, W. Jang, S. Bosco, M. Janik, S. Calcaterra, G. Katsaros, G. Isella, D. Loss, P. Scarlino, Nature Communications 15 (2024).","chicago":"De Palma, Franco, Fabian Oppliger, Wonjin Jang, Stefano Bosco, Marian Janik, Stefano Calcaterra, Georgios Katsaros, Giovanni Isella, Daniel Loss, and Pasquale Scarlino. “Strong Hole-Photon Coupling in Planar Ge for Probing Charge Degree and Strongly Correlated States.” <i>Nature Communications</i>. Springer Nature, 2024. <a href=\"https://doi.org/10.1038/s41467-024-54520-7\">https://doi.org/10.1038/s41467-024-54520-7</a>."},"article_type":"original","ddc":["530"],"date_updated":"2025-09-08T14:46:06Z","intvolume":"        15","OA_place":"publisher","OA_type":"gold","project":[{"grant_number":"P32235","call_identifier":"FWF","name":"Towards scalable hut wire quantum devices","_id":"237B3DA4-32DE-11EA-91FC-C7463DDC885E"},{"name":"High impedance circuit quantum electrodynamics with hole spins","_id":"c0977eea-5a5b-11eb-8a69-a862db0cf4d1","grant_number":"I05060"}],"author":[{"full_name":"De Palma, Franco","last_name":"De Palma","first_name":"Franco"},{"full_name":"Oppliger, Fabian","first_name":"Fabian","last_name":"Oppliger"},{"last_name":"Jang","first_name":"Wonjin","full_name":"Jang, Wonjin"},{"first_name":"Stefano","last_name":"Bosco","full_name":"Bosco, Stefano"},{"full_name":"Janik, Marian","id":"396A1950-F248-11E8-B48F-1D18A9856A87","orcid":"0009-0003-9037-8831","first_name":"Marian","last_name":"Janik"},{"full_name":"Calcaterra, Stefano","first_name":"Stefano","last_name":"Calcaterra"},{"orcid":"0000-0001-8342-202X","first_name":"Georgios","last_name":"Katsaros","full_name":"Katsaros, Georgios","id":"38DB5788-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Isella, Giovanni","first_name":"Giovanni","last_name":"Isella"},{"full_name":"Loss, Daniel","last_name":"Loss","first_name":"Daniel"},{"full_name":"Scarlino, Pasquale","last_name":"Scarlino","first_name":"Pasquale"}],"pmid":1,"publication_status":"published","file_date_updated":"2024-12-03T11:00:15Z","year":"2024","month":"12","volume":15,"article_number":"10177","quality_controlled":"1","_id":"18602","date_published":"2024-12-01T00:00:00Z","publisher":"Springer Nature","isi":1,"acknowledgement":"The authors thank Simone Frasca, Vincent Jouanny, Guillaume Beaulieu, Camille Roy, Dominic Dahinden, Davide Lombardo, Daniel Chrastina, and Siddhart Gautam for contributing to some cleanroom fabrication steps, the measurement setup, device simulations, data analysis, and for the useful discussions. P.S. acknowledges support from the Swiss National Science Foundation (SNSF) through the grants Ref. No. 200021 200418 and Ref. No. 206021_205335, and from the Swiss State Secretariat for Education, Research and Innovation (SERI) under contract number 01042765 SEFRI MB22.00081. W.J. acknowledges support from the EPFL QSE Postdoctoral Fellowship Grant. S.B., D.L., and P.S. acknowledge support from the NCCR Spin Qubit in Silicon (NCCR-SPIN) Grant No. 51NF40-180604. M.J., G.K., G.I., and S.C. acknowledge support from the Horizon Europe Project IGNITE ID 101070193. G.K. acknowledges support from the FWF via the P32235 and I05060 projects.","doi":"10.1038/s41467-024-54520-7","file":[{"file_id":"18611","file_name":"2024_NatureComm_dePalma.pdf","date_updated":"2024-12-03T11:00:15Z","checksum":"ef9f99a84089c388904cc8aa8d89c55a","success":1,"file_size":5288092,"date_created":"2024-12-03T11:00:15Z","content_type":"application/pdf","access_level":"open_access","creator":"dernst","relation":"main_file"}],"tmp":{"short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"publication_identifier":{"eissn":["2041-1723"]},"article_processing_charge":"Yes","title":"Strong hole-photon coupling in planar Ge for probing charge degree and strongly correlated states","oa":1,"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","department":[{"_id":"GeKa"}],"day":"01"},{"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","oa":1,"title":"Presynaptic cAMP-PKA-mediated potentiation induces reconfiguration of synaptic vesicle pools and channel-vesicle coupling at hippocampal mossy fiber boutons","day":"18","department":[{"_id":"PeJo"},{"_id":"EM-Fac"},{"_id":"RySh"}],"article_processing_charge":"Yes","APC_amount":"6248,82 EUR","publication_identifier":{"eissn":["1545-7885"],"issn":["1544-9173"]},"tmp":{"short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"acknowledgement":"We thank Carolina Borges-Merjane, Jing-Jing Chen, Katharina Lichter, and Samuel Young for critically reading the manuscript; the Electron Microscopy Facility of ISTA, in particular Vanessa Zheden, for extensive support, advice, and experimental assistance; the Preclinical Facility of ISTA, in particular Victoria Wimmer and Michael Schunn, for experimental assistance; Florian Marr and Christina Altmutter for technical support; Alois Schlögl for help with analysis; and Eleftheria Kralli-Beller for manuscript editing. We also thank Cordelia Imig for providing Munc13-1cKO-Munc13-2/3(−/−) mutant mice. Part of the work has been published in O.K.’s thesis in partial fulfillment of the requirements for the degree of Doctor of Philosophy.\r\nThis project received funding from the European Research Council and European Union’s Horizon 2020 research and innovation programme (ERC 692692 to P.J.; https://cordis.europa.eu/project/id/692692/de) and from the Fond zur Förderung der Wissenschaftlichen Forschung (Z312-B27 Wittgenstein award to P.J., https://www.fwf.ac.at/en/funding/portfolio/projects/fwf-wittgenstein-award; W1205-B09 and P36232-B to P.J., https://www.fwf.ac.at/en/funding; I6166-B to R.S.; https://www.fwf.ac.at/en/funding). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.","file":[{"checksum":"7de2dcb50deb65dde05c80082bb85a82","success":1,"date_updated":"2024-12-03T08:56:53Z","file_name":"2024_PloSBio_Kim.pdf","file_id":"18608","file_size":3057631,"content_type":"application/pdf","date_created":"2024-12-03T08:56:53Z","relation":"main_file","creator":"dernst","access_level":"open_access"}],"isi":1,"doi":"10.1371/journal.pbio.3002879","publisher":"Public Library of Science","date_published":"2024-11-18T00:00:00Z","_id":"18603","quality_controlled":"1","article_number":"e3002879","year":"2024","publication_status":"published","file_date_updated":"2024-12-03T08:56:53Z","issue":"11","related_material":{"record":[{"relation":"research_data","id":"18296","status":"public"}]},"volume":22,"month":"11","acknowledged_ssus":[{"_id":"EM-Fac"},{"_id":"PreCl"}],"author":[{"full_name":"Kim, Olena","id":"3F8ABDDA-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-2344-1039","first_name":"Olena","last_name":"Kim"},{"full_name":"Okamoto, Yuji","id":"3337E116-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-0408-6094","first_name":"Yuji","last_name":"Okamoto"},{"last_name":"Kaufmann","first_name":"Walter","orcid":"0000-0001-9735-5315","id":"3F99E422-F248-11E8-B48F-1D18A9856A87","full_name":"Kaufmann, Walter"},{"full_name":"Brose, Nils","last_name":"Brose","first_name":"Nils"},{"first_name":"Ryuichi","orcid":"0000-0001-8761-9444","last_name":"Shigemoto","id":"499F3ABC-F248-11E8-B48F-1D18A9856A87","full_name":"Shigemoto, Ryuichi"},{"full_name":"Jonas, Peter M","id":"353C1B58-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-5001-4804","first_name":"Peter M","last_name":"Jonas"}],"pmid":1,"OA_place":"publisher","intvolume":"        22","date_updated":"2026-04-16T12:20:34Z","ddc":["570"],"OA_type":"gold","project":[{"name":"Biophysics and circuit function of a giant cortical glutamatergic synapse","call_identifier":"H2020","_id":"25B7EB9E-B435-11E9-9278-68D0E5697425","grant_number":"692692"},{"grant_number":"Z00312","_id":"25C5A090-B435-11E9-9278-68D0E5697425","call_identifier":"FWF","name":"Synaptic communication in neuronal microcircuits"},{"name":"Mechanisms of GABA release in hippocampal circuits","_id":"bd88be38-d553-11ed-ba76-81d5a70a6ef5","grant_number":"P36232"},{"grant_number":"I06166","_id":"b1b85715-d554-11ed-a5ad-84a07fc9f18e","name":"Structural & functional basis of presynaptic plasticity"},{"grant_number":"W01205","name":"Zellkommunikation in Gesundheit und Krankheit","_id":"25C3DBB6-B435-11E9-9278-68D0E5697425","call_identifier":"FWF"},{"_id":"3AC91DDA-15DF-11EA-824D-93A3E7B544D1","call_identifier":"FWF","name":"FWF Open Access Fund"}],"oa_version":"Published Version","publication":"PLoS Biology","scopus_import":"1","date_created":"2024-12-01T23:01:54Z","type":"journal_article","corr_author":"1","abstract":[{"lang":"eng","text":"It is widely believed that information storage in neuronal circuits involves nanoscopic structural changes at synapses, resulting in the formation of synaptic engrams. However, direct evidence for this hypothesis is lacking. To test this conjecture, we combined chemical potentiation, functional analysis by paired pre-postsynaptic recordings, and structural analysis by electron microscopy (EM) and freeze-fracture replica labeling (FRL) at the rodent hippocampal mossy fiber synapse, a key synapse in the trisynaptic circuit of the hippocampus. Biophysical analysis of synaptic transmission revealed that forskolin-induced chemical potentiation increased the readily releasable vesicle pool size and vesicular release probability by 146% and 49%, respectively. Structural analysis of mossy fiber synapses by EM and FRL demonstrated an increase in the number of vesicles close to the plasma membrane and the number of clusters of the priming protein Munc13-1, indicating an increase in the number of both docked and primed vesicles. Furthermore, FRL analysis revealed a significant reduction of the distance between Munc13-1 and CaV2.1 Ca2+ channels, suggesting reconfiguration of the channel-vesicle coupling nanotopography. Our results indicate that presynaptic plasticity is associated with structural reorganization of active zones. We propose that changes in potential nanoscopic organization at synaptic vesicle release sites may be correlates of learning and memory at a plastic central synapse."}],"has_accepted_license":"1","external_id":{"isi":["001358568700003"],"pmid":["39556620"]},"status":"public","DOAJ_listed":"1","citation":{"ama":"Kim O, Okamoto Y, Kaufmann W, Brose N, Shigemoto R, Jonas PM. Presynaptic cAMP-PKA-mediated potentiation induces reconfiguration of synaptic vesicle pools and channel-vesicle coupling at hippocampal mossy fiber boutons. <i>PLoS Biology</i>. 2024;22(11). doi:<a href=\"https://doi.org/10.1371/journal.pbio.3002879\">10.1371/journal.pbio.3002879</a>","ieee":"O. Kim, Y. Okamoto, W. Kaufmann, N. Brose, R. Shigemoto, and P. M. Jonas, “Presynaptic cAMP-PKA-mediated potentiation induces reconfiguration of synaptic vesicle pools and channel-vesicle coupling at hippocampal mossy fiber boutons,” <i>PLoS Biology</i>, vol. 22, no. 11. Public Library of Science, 2024.","ista":"Kim O, Okamoto Y, Kaufmann W, Brose N, Shigemoto R, Jonas PM. 2024. Presynaptic cAMP-PKA-mediated potentiation induces reconfiguration of synaptic vesicle pools and channel-vesicle coupling at hippocampal mossy fiber boutons. PLoS Biology. 22(11), e3002879.","apa":"Kim, O., Okamoto, Y., Kaufmann, W., Brose, N., Shigemoto, R., &#38; Jonas, P. M. (2024). Presynaptic cAMP-PKA-mediated potentiation induces reconfiguration of synaptic vesicle pools and channel-vesicle coupling at hippocampal mossy fiber boutons. <i>PLoS Biology</i>. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pbio.3002879\">https://doi.org/10.1371/journal.pbio.3002879</a>","short":"O. Kim, Y. Okamoto, W. Kaufmann, N. Brose, R. Shigemoto, P.M. Jonas, PLoS Biology 22 (2024).","mla":"Kim, Olena, et al. “Presynaptic CAMP-PKA-Mediated Potentiation Induces Reconfiguration of Synaptic Vesicle Pools and Channel-Vesicle Coupling at Hippocampal Mossy Fiber Boutons.” <i>PLoS Biology</i>, vol. 22, no. 11, e3002879, Public Library of Science, 2024, doi:<a href=\"https://doi.org/10.1371/journal.pbio.3002879\">10.1371/journal.pbio.3002879</a>.","chicago":"Kim, Olena, Yuji Okamoto, Walter Kaufmann, Nils Brose, Ryuichi Shigemoto, and Peter M Jonas. “Presynaptic CAMP-PKA-Mediated Potentiation Induces Reconfiguration of Synaptic Vesicle Pools and Channel-Vesicle Coupling at Hippocampal Mossy Fiber Boutons.” <i>PLoS Biology</i>. Public Library of Science, 2024. <a href=\"https://doi.org/10.1371/journal.pbio.3002879\">https://doi.org/10.1371/journal.pbio.3002879</a>."},"article_type":"original","ec_funded":1,"language":[{"iso":"eng"}]},{"page":"47-82","author":[{"full_name":"De Nooijer, Phoebe","last_name":"De Nooijer","first_name":"Phoebe"},{"full_name":"Terziadis, Soeren","last_name":"Terziadis","first_name":"Soeren"},{"first_name":"Alexandra","last_name":"Weinberger","full_name":"Weinberger, Alexandra"},{"full_name":"Masárová, Zuzana","id":"45CFE238-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-6660-1322","first_name":"Zuzana","last_name":"Masárová"},{"full_name":"Mchedlidze, Tamara","first_name":"Tamara","last_name":"Mchedlidze"},{"last_name":"Löffler","first_name":"Maarten","full_name":"Löffler, Maarten"},{"first_name":"Günter","last_name":"Rote","full_name":"Rote, Günter"}],"month":"11","volume":28,"issue":"2","publication_status":"published","file_date_updated":"2024-12-03T09:45:00Z","year":"2024","language":[{"iso":"eng"}],"article_type":"original","citation":{"apa":"De Nooijer, P., Terziadis, S., Weinberger, A., Masárová, Z., Mchedlidze, T., Löffler, M., &#38; Rote, G. (2024). Removing popular faces in curve arrangements. <i>Journal of Graph Algorithms and Applications</i>. Brown University. <a href=\"https://doi.org/10.7155/jgaa.v28i2.2988\">https://doi.org/10.7155/jgaa.v28i2.2988</a>","ama":"De Nooijer P, Terziadis S, Weinberger A, et al. Removing popular faces in curve arrangements. <i>Journal of Graph Algorithms and Applications</i>. 2024;28(2):47-82. doi:<a href=\"https://doi.org/10.7155/jgaa.v28i2.2988\">10.7155/jgaa.v28i2.2988</a>","ista":"De Nooijer P, Terziadis S, Weinberger A, Masárová Z, Mchedlidze T, Löffler M, Rote G. 2024. Removing popular faces in curve arrangements. Journal of Graph Algorithms and Applications. 28(2), 47–82.","ieee":"P. De Nooijer <i>et al.</i>, “Removing popular faces in curve arrangements,” <i>Journal of Graph Algorithms and Applications</i>, vol. 28, no. 2. Brown University, pp. 47–82, 2024.","mla":"De Nooijer, Phoebe, et al. “Removing Popular Faces in Curve Arrangements.” <i>Journal of Graph Algorithms and Applications</i>, vol. 28, no. 2, Brown University, 2024, pp. 47–82, doi:<a href=\"https://doi.org/10.7155/jgaa.v28i2.2988\">10.7155/jgaa.v28i2.2988</a>.","short":"P. De Nooijer, S. Terziadis, A. Weinberger, Z. Masárová, T. Mchedlidze, M. Löffler, G. Rote, Journal of Graph Algorithms and Applications 28 (2024) 47–82.","chicago":"De Nooijer, Phoebe, Soeren Terziadis, Alexandra Weinberger, Zuzana Masárová, Tamara Mchedlidze, Maarten Löffler, and Günter Rote. “Removing Popular Faces in Curve Arrangements.” <i>Journal of Graph Algorithms and Applications</i>. Brown University, 2024. <a href=\"https://doi.org/10.7155/jgaa.v28i2.2988\">https://doi.org/10.7155/jgaa.v28i2.2988</a>."},"DOAJ_listed":"1","external_id":{"arxiv":["2202.12175"]},"status":"public","has_accepted_license":"1","abstract":[{"text":"A face in a curve arrangement is called popular if it is bounded by the same curve multiple times. Motivated by the automatic generation of curved nonogram puzzles, we investigate possibilities to eliminate the popular faces in an arrangement by inserting a single additional curve. This turns out to be NP-hard; however, it becomes tractable when the number of popular faces is small: We present a randomized FPT-time algorithm where the parameter is the number of popular faces.","lang":"eng"}],"type":"journal_article","corr_author":"1","publication":"Journal of Graph Algorithms and Applications","oa_version":"Published Version","date_created":"2024-12-01T23:01:54Z","scopus_import":"1","OA_type":"gold","arxiv":1,"ddc":["510"],"date_updated":"2024-12-03T09:49:18Z","OA_place":"publisher","intvolume":"        28","tmp":{"short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"publication_identifier":{"issn":["1526-1719"]},"article_processing_charge":"No","department":[{"_id":"UlWa"},{"_id":"HeEd"}],"day":"03","title":"Removing popular faces in curve arrangements","oa":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2024-11-03T00:00:00Z","_id":"18604","quality_controlled":"1","publisher":"Brown University","acknowledgement":"This work was initiated at the 16th European Research Week on Geometric Graphs in Strobl in 2019. A.W. has been supported by the Austrian Science Fund (FWF): W1230. S.T. has been funded by the Vienna Science and Technology Fund (WWTF) [10.47379/ICT19035] and by the NWO Gravitation project NETWORKS under grant no. 024.002.003. Part of the work was done while A.W. was emplyed at Graz University of Technology. Preliminary versions of this work have been presented at the 38th European Workshop on Computational Geometry (EuroCG\r\n2022) in Perugia [10] and at the 31st International Symposium on Graph Drawing and Network Visualization (GD 2023) in Isola delle Femmine [11].","file":[{"file_size":1582493,"success":1,"checksum":"be611da6f9d790dc980d6fb7283fe889","file_name":"2024_JourGraphAlgorithms_deNooijer.pdf","file_id":"18609","date_updated":"2024-12-03T09:45:00Z","creator":"dernst","relation":"main_file","access_level":"open_access","date_created":"2024-12-03T09:45:00Z","content_type":"application/pdf"}],"doi":"10.7155/jgaa.v28i2.2988"},{"day":"27","department":[{"_id":"MaSe"}],"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","title":"Quantum scars make their mark in graphene","article_processing_charge":"No","publication_identifier":{"issn":["0028-0836"],"eissn":["1476-4687"]},"isi":1,"doi":"10.1038/d41586-024-03649-y","publisher":"Springer Nature","quality_controlled":"1","_id":"18616","date_published":"2024-11-27T00:00:00Z","volume":635,"issue":"8040","month":"11","year":"2024","publication_status":"published","pmid":1,"page":"825-826","author":[{"first_name":"Dmitry","last_name":"Abanin","full_name":"Abanin, Dmitry"},{"orcid":"0000-0002-2399-5827","first_name":"Maksym","last_name":"Serbyn","full_name":"Serbyn, Maksym","id":"47809E7E-F248-11E8-B48F-1D18A9856A87"}],"OA_type":"closed access","intvolume":"       635","date_updated":"2025-09-08T14:57:35Z","language":[{"iso":"eng"}],"citation":{"chicago":"Abanin, Dmitry, and Maksym Serbyn. “Quantum Scars Make Their Mark in Graphene.” <i>Nature</i>. Springer Nature, 2024. <a href=\"https://doi.org/10.1038/d41586-024-03649-y\">https://doi.org/10.1038/d41586-024-03649-y</a>.","short":"D. Abanin, M. Serbyn, Nature 635 (2024) 825–826.","mla":"Abanin, Dmitry, and Maksym Serbyn. “Quantum Scars Make Their Mark in Graphene.” <i>Nature</i>, vol. 635, no. 8040, Springer Nature, 2024, pp. 825–26, doi:<a href=\"https://doi.org/10.1038/d41586-024-03649-y\">10.1038/d41586-024-03649-y</a>.","ista":"Abanin D, Serbyn M. 2024. Quantum scars make their mark in graphene. Nature. 635(8040), 825–826.","ieee":"D. Abanin and M. Serbyn, “Quantum scars make their mark in graphene,” <i>Nature</i>, vol. 635, no. 8040. Springer Nature, pp. 825–826, 2024.","ama":"Abanin D, Serbyn M. Quantum scars make their mark in graphene. <i>Nature</i>. 2024;635(8040):825-826. doi:<a href=\"https://doi.org/10.1038/d41586-024-03649-y\">10.1038/d41586-024-03649-y</a>","apa":"Abanin, D., &#38; Serbyn, M. (2024). Quantum scars make their mark in graphene. <i>Nature</i>. Springer Nature. <a href=\"https://doi.org/10.1038/d41586-024-03649-y\">https://doi.org/10.1038/d41586-024-03649-y</a>"},"article_type":"letter_note","type":"journal_article","scopus_import":"1","oa_version":"None","date_created":"2024-12-03T18:08:16Z","publication":"Nature","status":"public","external_id":{"pmid":["39604614"],"isi":["001367935000029"]},"abstract":[{"lang":"eng","text":"By patterning an ultrathin layered structure with tiny wells, physicists have created and imaged peculiar states known as quantum scars — revealing behaviour that could be used to boost the performance of electronic devices."}]},{"page":"281-304","author":[{"id":"78ea3cc9-31e7-11ee-aa02-a6169bbfe1f1","full_name":"Beďatš, Daniel","first_name":"Daniel","orcid":"0009-0004-1828-0044","last_name":"Beďatš"}],"volume":651,"month":"08","year":"2024","publication_status":"published","file_date_updated":"2024-12-09T13:56:26Z","language":[{"iso":"eng"}],"article_type":"original","citation":{"mla":"Beďatš, Daniel. “Separation of Variables for Scalar-Valued Polynomials in the Non-Stable Range.” <i>Journal of Algebra</i>, vol. 651, Elsevier, 2024, pp. 281–304, doi:<a href=\"https://doi.org/10.1016/j.jalgebra.2024.04.013\">10.1016/j.jalgebra.2024.04.013</a>.","short":"D. Beďatš, Journal of Algebra 651 (2024) 281–304.","apa":"Beďatš, D. (2024). Separation of variables for scalar-valued polynomials in the non-stable range. <i>Journal of Algebra</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.jalgebra.2024.04.013\">https://doi.org/10.1016/j.jalgebra.2024.04.013</a>","ama":"Beďatš D. Separation of variables for scalar-valued polynomials in the non-stable range. <i>Journal of Algebra</i>. 2024;651:281-304. doi:<a href=\"https://doi.org/10.1016/j.jalgebra.2024.04.013\">10.1016/j.jalgebra.2024.04.013</a>","ieee":"D. Beďatš, “Separation of variables for scalar-valued polynomials in the non-stable range,” <i>Journal of Algebra</i>, vol. 651. Elsevier, pp. 281–304, 2024.","ista":"Beďatš D. 2024. Separation of variables for scalar-valued polynomials in the non-stable range. Journal of Algebra. 651, 281–304.","chicago":"Beďatš, Daniel. “Separation of Variables for Scalar-Valued Polynomials in the Non-Stable Range.” <i>Journal of Algebra</i>. Elsevier, 2024. <a href=\"https://doi.org/10.1016/j.jalgebra.2024.04.013\">https://doi.org/10.1016/j.jalgebra.2024.04.013</a>."},"corr_author":"1","type":"journal_article","publication":"Journal of Algebra","oa_version":"Published Version","date_created":"2024-12-04T07:58:45Z","scopus_import":"1","external_id":{"isi":["001232775600001"],"arxiv":["2309.11154"]},"has_accepted_license":"1","status":"public","abstract":[{"lang":"eng","text":"Any complex-valued polynomial on (Rn)k decomposes into an algebraic combination of O(n)-invariant polynomials and harmonic polynomials. This decomposition, separation of variables, is granted to be unique if n≥2k−1. We prove that the condition n≥2k−1 is not only sufficient, but also necessary for uniqueness of the separation. Moreover, we describe the structure of non-uniqueness of the separation in the boundary cases when n=2k−2 and n=2k−3.\r\nFormally, we study the kernel of a multiplication map ϕ carrying out separation of variables. We devise a general algorithmic procedure for describing Ker ϕ in the restricted non-stable range k≤n<2k−1. In the full non-stable range n<2k−1, we give formulas for highest weights of generators of the kernel as well as formulas for its Hilbert series. Using the developed methods, we obtain a list of highest weight vectors generating Ker ϕ."}],"OA_type":"hybrid","intvolume":"       651","OA_place":"publisher","ddc":["510"],"arxiv":1,"date_updated":"2025-09-08T14:57:00Z","article_processing_charge":"Yes (via OA deal)","tmp":{"short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"publication_identifier":{"issn":["0021-8693"]},"day":"01","department":[{"_id":"UlWa"}],"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","title":"Separation of variables for scalar-valued polynomials in the non-stable range","oa":1,"_id":"18617","quality_controlled":"1","date_published":"2024-08-01T00:00:00Z","isi":1,"file":[{"file_size":486969,"success":1,"checksum":"7b01c89128ba16d5334dfab389a03878","file_id":"18638","file_name":"2024_JourAlgebra_Bedats.pdf","date_updated":"2024-12-09T13:56:26Z","creator":"dernst","relation":"main_file","access_level":"open_access","date_created":"2024-12-09T13:56:26Z","content_type":"application/pdf"}],"acknowledgement":"The author is sincerely grateful for guidance, advice and valuable feedback from Roman Lávička.","doi":"10.1016/j.jalgebra.2024.04.013","publisher":"Elsevier"},{"article_processing_charge":"No","publication_identifier":{"issn":["0031-9007"],"eissn":["1079-7114"]},"day":"22","department":[{"_id":"MaSe"}],"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","title":"Enhanced many-body quantum scars from the non-hermitian fock skin effect","oa":1,"quality_controlled":"1","_id":"18627","date_published":"2024-11-22T00:00:00Z","article_number":"216601","acknowledgement":"F. Q. and C. H. L. acknowledge support from the QEP2.0 Grant from the Singapore National Research Foundation (Grant No. NRF2021-QEP2-02-P09) and the Singapore MOE Tier-II Grant (Grant No. MOE-T2EP50222-0003). J.-Y. D. and Z. P. acknowledge support by the Leverhulme Trust Research Leadership Award RL-2019-015. This project has received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie Grant Agreement No. 101034413. This research was supported in part by Grant No. NSF PHY-2309135 to the Kavli Institute for Theoretical Physics (KITP). We acknowledge the use of IBM Quantum services for this work. The views expressed are those of the authors and do not reflect the official policy or position of IBM or the IBM Quantum team.","doi":"10.1103/PhysRevLett.133.216601","isi":1,"publisher":"American Physical Society","pmid":1,"author":[{"full_name":"Shen, Ruizhe","first_name":"Ruizhe","last_name":"Shen"},{"last_name":"Qin","first_name":"Fang","full_name":"Qin, Fang"},{"first_name":"Jean-Yves Marc","orcid":"0000-0002-3749-6375","last_name":"Desaules","id":"6c292945-a610-11ed-9eec-c3be1ad62a80","full_name":"Desaules, Jean-Yves Marc"},{"last_name":"Papić","first_name":"Zlatko","full_name":"Papić, Zlatko"},{"first_name":"Ching Hua","last_name":"Lee","full_name":"Lee, Ching Hua"}],"volume":133,"related_material":{"record":[{"status":"public","id":"17471","relation":"research_data"}]},"issue":"21","month":"11","year":"2024","publication_status":"published","language":[{"iso":"eng"}],"article_type":"original","citation":{"ista":"Shen R, Qin F, Desaules J-YM, Papić Z, Lee CH. 2024. Enhanced many-body quantum scars from the non-hermitian fock skin effect. Physical Review Letters. 133(21), 216601.","ama":"Shen R, Qin F, Desaules J-YM, Papić Z, Lee CH. Enhanced many-body quantum scars from the non-hermitian fock skin effect. <i>Physical Review Letters</i>. 2024;133(21). doi:<a href=\"https://doi.org/10.1103/PhysRevLett.133.216601\">10.1103/PhysRevLett.133.216601</a>","ieee":"R. Shen, F. Qin, J.-Y. M. Desaules, Z. Papić, and C. H. Lee, “Enhanced many-body quantum scars from the non-hermitian fock skin effect,” <i>Physical Review Letters</i>, vol. 133, no. 21. American Physical Society, 2024.","apa":"Shen, R., Qin, F., Desaules, J.-Y. M., Papić, Z., &#38; Lee, C. H. (2024). Enhanced many-body quantum scars from the non-hermitian fock skin effect. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevLett.133.216601\">https://doi.org/10.1103/PhysRevLett.133.216601</a>","short":"R. Shen, F. Qin, J.-Y.M. Desaules, Z. Papić, C.H. Lee, Physical Review Letters 133 (2024).","mla":"Shen, Ruizhe, et al. “Enhanced Many-Body Quantum Scars from the Non-Hermitian Fock Skin Effect.” <i>Physical Review Letters</i>, vol. 133, no. 21, 216601, American Physical Society, 2024, doi:<a href=\"https://doi.org/10.1103/PhysRevLett.133.216601\">10.1103/PhysRevLett.133.216601</a>.","chicago":"Shen, Ruizhe, Fang Qin, Jean-Yves Marc Desaules, Zlatko Papić, and Ching Hua Lee. “Enhanced Many-Body Quantum Scars from the Non-Hermitian Fock Skin Effect.” <i>Physical Review Letters</i>. American Physical Society, 2024. <a href=\"https://doi.org/10.1103/PhysRevLett.133.216601\">https://doi.org/10.1103/PhysRevLett.133.216601</a>."},"ec_funded":1,"main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2403.02395"}],"type":"journal_article","publication":"Physical Review Letters","oa_version":"Preprint","date_created":"2024-12-08T23:01:55Z","scopus_import":"1","external_id":{"arxiv":["2403.02395"],"isi":["001369697800005"],"pmid":["39642519"]},"status":"public","abstract":[{"lang":"eng","text":"In contrast with extended Bloch waves, a single particle can become spatially localized due to the so-called skin effect originating from non-Hermitian pumping. Here we show that in kinetically constrained many-body systems, the skin effect can instead manifest as dynamical amplification within the Fock space, beyond the intuitively expected and previously studied particle localization and clustering. We exemplify this non-Hermitian Fock skin effect in an asymmetric version of the PXP model and show that it gives rise to ergodicity-breaking eigenstates—the non-Hermitian analogs of quantum many-body scars. A distinguishing feature of these non-Hermitian scars is their enhanced robustness against external disorders. We propose an experimental realization of the non-Hermitian scar enhancement in a tilted Bose-Hubbard optical lattice with laser-induced loss. Additionally, we implement digital simulations of such scar enhancement on the IBM quantum processor. Our results show that the Fock skin effect provides a powerful tool for creating robust nonergodic states in generic open quantum systems."}],"OA_type":"green","project":[{"grant_number":"101034413","name":"IST-BRIDGE: International postdoctoral program","call_identifier":"H2020","_id":"fc2ed2f7-9c52-11eb-aca3-c01059dda49c"}],"intvolume":"       133","OA_place":"repository","arxiv":1,"date_updated":"2026-06-10T07:52:52Z"},{"day":"12","department":[{"_id":"FrPe"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa":1,"title":"The importance of solving Subglaciar hydrology in modeling glacier retreat: A case study of Hansbreen, Svalbard","article_processing_charge":"Yes","publication_identifier":{"eissn":["2306-5338"]},"tmp":{"short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"file":[{"content_type":"application/pdf","date_created":"2024-12-09T09:43:33Z","access_level":"open_access","creator":"dernst","relation":"main_file","file_id":"18635","file_name":"2024_Hydrology_deAndres.pdf","date_updated":"2024-12-09T09:43:33Z","success":1,"checksum":"0665c5bfca97782bf0b041f23dd7e8d7","file_size":5709093}],"acknowledgement":"E. De Andrés is supported by Margarita-Salas Grant No. UP2021-035 under the Next Generation-EU program. This research was also funded by grant PID2020-113051RB-C31 from MCIN/AEI/10.13039/501100011033/FEDER, UE.\r\nWe gratefully acknowledge Michal Cieply and Dariusz Ignatiuk from the Faculty of Natural Sciences, University of Silesia in Katowice, Poland, for their essential contributions to the Hansbreen data collection. We also extend our sincere thanks to Waldemar Walczowski from the Institute of Oceanology, Polish Academy of Sciences, Sopot, Poland, for providing Hansbuka data. Additionally, we would like to thank two anonymous reviewers for their constructive feedback, which helped to enhance the quality and clarity of this work.","doi":"10.3390/hydrology11110193","publisher":"MDPI","_id":"18628","date_published":"2024-11-12T00:00:00Z","quality_controlled":"1","article_number":"193","issue":"11","related_material":{"record":[{"relation":"used_in_publication","id":"18634","status":"public"}]},"volume":11,"month":"11","year":"2024","publication_status":"published","file_date_updated":"2024-12-09T09:43:33Z","author":[{"first_name":"Eva","last_name":"De Andrés","full_name":"De Andrés, Eva"},{"id":"e1037a6d-646e-11ef-b402-e0ed9ab0901e","full_name":"Muñoz Hermosilla, José M","last_name":"Muñoz Hermosilla","first_name":"José M"},{"full_name":"Shahateet, Kaian","first_name":"Kaian","last_name":"Shahateet"},{"full_name":"Otero, Jaime","last_name":"Otero","first_name":"Jaime"}],"OA_type":"gold","intvolume":"        11","OA_place":"publisher","date_updated":"2024-12-09T09:43:48Z","ddc":["550"],"DOAJ_listed":"1","citation":{"chicago":"De Andrés, Eva, José M Muñoz Hermosilla, Kaian Shahateet, and Jaime Otero. “The Importance of Solving Subglaciar Hydrology in Modeling Glacier Retreat: A Case Study of Hansbreen, Svalbard.” <i>Hydrology</i>. MDPI, 2024. <a href=\"https://doi.org/10.3390/hydrology11110193\">https://doi.org/10.3390/hydrology11110193</a>.","ista":"De Andrés E, Muñoz Hermosilla JM, Shahateet K, Otero J. 2024. The importance of solving Subglaciar hydrology in modeling glacier retreat: A case study of Hansbreen, Svalbard. Hydrology. 11(11), 193.","ieee":"E. De Andrés, J. M. Muñoz Hermosilla, K. Shahateet, and J. Otero, “The importance of solving Subglaciar hydrology in modeling glacier retreat: A case study of Hansbreen, Svalbard,” <i>Hydrology</i>, vol. 11, no. 11. MDPI, 2024.","ama":"De Andrés E, Muñoz Hermosilla JM, Shahateet K, Otero J. The importance of solving Subglaciar hydrology in modeling glacier retreat: A case study of Hansbreen, Svalbard. <i>Hydrology</i>. 2024;11(11). doi:<a href=\"https://doi.org/10.3390/hydrology11110193\">10.3390/hydrology11110193</a>","apa":"De Andrés, E., Muñoz Hermosilla, J. M., Shahateet, K., &#38; Otero, J. (2024). The importance of solving Subglaciar hydrology in modeling glacier retreat: A case study of Hansbreen, Svalbard. <i>Hydrology</i>. MDPI. <a href=\"https://doi.org/10.3390/hydrology11110193\">https://doi.org/10.3390/hydrology11110193</a>","short":"E. De Andrés, J.M. Muñoz Hermosilla, K. Shahateet, J. Otero, Hydrology 11 (2024).","mla":"De Andrés, Eva, et al. “The Importance of Solving Subglaciar Hydrology in Modeling Glacier Retreat: A Case Study of Hansbreen, Svalbard.” <i>Hydrology</i>, vol. 11, no. 11, 193, MDPI, 2024, doi:<a href=\"https://doi.org/10.3390/hydrology11110193\">10.3390/hydrology11110193</a>."},"article_type":"original","language":[{"iso":"eng"}],"date_created":"2024-12-08T23:01:55Z","scopus_import":"1","publication":"Hydrology","oa_version":"Published Version","type":"journal_article","corr_author":"1","abstract":[{"text":"Arctic tidewater glaciers are retreating, serving as key indicators of global warming. This study aims to assess how subglacial hydrology affects glacier front retreat by comparing two glacier–fjord models of the Hansbreen glacier: one incorporating a detailed subglacial hydrology model and another simplifying the subglacial discharge to a single channel centered in the flow line. We first validate the subglacial hydrology model by comparing its discharge channels with observations of plume activity. Simulations conducted from April to December 2010 revealed that the glacier front position aligns more closely with the observations in the coupled model than in the simplified version. Furthermore, the mass loss due to calving and submarine melting is greater in the coupled model, with the calving mass loss reaching 6 Mt by the end of the simulation compared to 4 Mt in the simplified model. These findings highlight the critical role of subglacial hydrology in predicting glacier dynamics and emphasize the importance of detailed modeling in understanding the responses of Arctic tidewater glaciers to climate change.","lang":"eng"}],"has_accepted_license":"1","status":"public"},{"publisher":"American Physical Society","doi":"10.1103/PhysRevA.110.053317","isi":1,"acknowledgement":"The authors acknowledge that this material is based upon work supported by the National Science Foundation/EPSCoR RII Track-1: Emergent Quantum Materials and Technologies (EQUATE), Award No. OIA-2044049.","article_number":"053317","date_published":"2024-11-18T00:00:00Z","_id":"18629","quality_controlled":"1","department":[{"_id":"MiLe"}],"day":"18","oa":1,"title":"Anisotropic potential immersed in a dipolar Bose-Einstein condensate","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","publication_identifier":{"eissn":["2469-9934"],"issn":["2469-9926"]},"article_processing_charge":"No","OA_type":"green","date_updated":"2025-09-08T14:56:22Z","arxiv":1,"intvolume":"       110","OA_place":"repository","article_type":"original","citation":{"short":"N. Shukla, A. Volosniev, J.R. Armstrong, Physical Review A 110 (2024).","mla":"Shukla, Neelam, et al. “Anisotropic Potential Immersed in a Dipolar Bose-Einstein Condensate.” <i>Physical Review A</i>, vol. 110, no. 5, 053317, American Physical Society, 2024, doi:<a href=\"https://doi.org/10.1103/PhysRevA.110.053317\">10.1103/PhysRevA.110.053317</a>.","ieee":"N. Shukla, A. Volosniev, and J. R. Armstrong, “Anisotropic potential immersed in a dipolar Bose-Einstein condensate,” <i>Physical Review A</i>, vol. 110, no. 5. American Physical Society, 2024.","ama":"Shukla N, Volosniev A, Armstrong JR. Anisotropic potential immersed in a dipolar Bose-Einstein condensate. <i>Physical Review A</i>. 2024;110(5). doi:<a href=\"https://doi.org/10.1103/PhysRevA.110.053317\">10.1103/PhysRevA.110.053317</a>","ista":"Shukla N, Volosniev A, Armstrong JR. 2024. Anisotropic potential immersed in a dipolar Bose-Einstein condensate. Physical Review A. 110(5), 053317.","apa":"Shukla, N., Volosniev, A., &#38; Armstrong, J. R. (2024). Anisotropic potential immersed in a dipolar Bose-Einstein condensate. <i>Physical Review A</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevA.110.053317\">https://doi.org/10.1103/PhysRevA.110.053317</a>","chicago":"Shukla, Neelam, Artem Volosniev, and Jeremy R. Armstrong. “Anisotropic Potential Immersed in a Dipolar Bose-Einstein Condensate.” <i>Physical Review A</i>. American Physical Society, 2024. <a href=\"https://doi.org/10.1103/PhysRevA.110.053317\">https://doi.org/10.1103/PhysRevA.110.053317</a>."},"language":[{"iso":"eng"}],"abstract":[{"lang":"eng","text":"We study a three-dimensional Gross-Pitaevskii equation that describes a static impurity in a dipolar Bose-Einstein condensate. Our focus is on the interplay between the shape of the impurity and the anisotropy of the medium manifested in the energy and the density of the system. Without external confinement, properties of the system are derived with basic analytical approaches. For a system in a harmonic trap, the model is investigated numerically, using the split-step Crank-Nicolson method. Our results demonstrate that the impurity self-energy is minimized when its shape more closely aligns with the anisotropic character of the bath; in particular a prolate deformed impurity aligned with the direction of the dipoles has the smallest self-energy for a repulsive impurity. Our work complements studies of impurities in Bose gases with zero-range interactions and paves the way for studies of dipolar polarons with a Gross-Pitaevskii equation."}],"external_id":{"isi":["001362623400019"],"arxiv":["2406.00217"]},"status":"public","scopus_import":"1","publication":"Physical Review A","oa_version":"Preprint","date_created":"2024-12-08T23:01:55Z","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2406.00217"}],"type":"journal_article","month":"11","issue":"5","volume":110,"publication_status":"published","year":"2024","author":[{"full_name":"Shukla, Neelam","first_name":"Neelam","last_name":"Shukla"},{"last_name":"Volosniev","orcid":"0000-0003-0393-5525","first_name":"Artem","full_name":"Volosniev, Artem","id":"37D278BC-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Armstrong, Jeremy R.","last_name":"Armstrong","first_name":"Jeremy R."}]},{"issue":"24","volume":34,"month":"12","year":"2024","publication_status":"published","pmid":1,"page":"R1230-R1232","author":[{"last_name":"Hino","first_name":"Naoya","id":"5299a9ce-7679-11eb-a7bc-d1e62b936307","full_name":"Hino, Naoya"},{"id":"6347dca5-074c-11ed-af92-a80f860d9d5b","full_name":"Santos Fernandes Lasbarrères Camelo, Carolina","last_name":"Santos Fernandes Lasbarrères Camelo","first_name":"Carolina"},{"last_name":"Heisenberg","first_name":"Carl-Philipp J","orcid":"0000-0002-0912-4566","id":"39427864-F248-11E8-B48F-1D18A9856A87","full_name":"Heisenberg, Carl-Philipp J"}],"OA_type":"closed access","intvolume":"        34","date_updated":"2025-09-09T11:51:15Z","citation":{"mla":"Hino, Naoya, et al. “Development: Turing Mechanics.” <i>Current Biology</i>, vol. 34, no. 24, Elsevier, 2024, pp. R1230–32, doi:<a href=\"https://doi.org/10.1016/j.cub.2024.10.065\">10.1016/j.cub.2024.10.065</a>.","short":"N. Hino, C. Santos Fernandes Lasbarrères Camelo, C.-P.J. Heisenberg, Current Biology 34 (2024) R1230–R1232.","apa":"Hino, N., Santos Fernandes Lasbarrères Camelo, C., &#38; Heisenberg, C.-P. J. (2024). Development: Turing mechanics. <i>Current Biology</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.cub.2024.10.065\">https://doi.org/10.1016/j.cub.2024.10.065</a>","ieee":"N. Hino, C. Santos Fernandes Lasbarrères Camelo, and C.-P. J. Heisenberg, “Development: Turing mechanics,” <i>Current Biology</i>, vol. 34, no. 24. Elsevier, pp. R1230–R1232, 2024.","ista":"Hino N, Santos Fernandes Lasbarrères Camelo C, Heisenberg C-PJ. 2024. Development: Turing mechanics. Current Biology. 34(24), R1230–R1232.","ama":"Hino N, Santos Fernandes Lasbarrères Camelo C, Heisenberg C-PJ. Development: Turing mechanics. <i>Current Biology</i>. 2024;34(24):R1230-R1232. doi:<a href=\"https://doi.org/10.1016/j.cub.2024.10.065\">10.1016/j.cub.2024.10.065</a>","chicago":"Hino, Naoya, Carolina Santos Fernandes Lasbarrères Camelo, and Carl-Philipp J Heisenberg. “Development: Turing Mechanics.” <i>Current Biology</i>. Elsevier, 2024. <a href=\"https://doi.org/10.1016/j.cub.2024.10.065\">https://doi.org/10.1016/j.cub.2024.10.065</a>."},"article_type":"letter_note","language":[{"iso":"eng"}],"publication":"Current Biology","date_created":"2024-12-15T23:01:49Z","oa_version":"None","scopus_import":"1","corr_author":"1","type":"journal_article","abstract":[{"text":"Embryo axis formation begins with the localized expression of biochemical signals, which organize cell movements and determine cell fate. A quail study finds that tissue contraction and resulting long-range changes in tissue tension restrict the area where these biochemical signals are expressed.","lang":"eng"}],"status":"public","external_id":{"isi":["001392077000001"],"pmid":["39689690"]},"day":"16","department":[{"_id":"CaHe"}],"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","title":"Development: Turing mechanics","article_processing_charge":"No","publication_identifier":{"issn":["0960-9822"],"eissn":["1879-0445"]},"isi":1,"doi":"10.1016/j.cub.2024.10.065","publisher":"Elsevier","_id":"18651","date_published":"2024-12-16T00:00:00Z","quality_controlled":"1"},{"author":[{"full_name":"Dey, Bikash Kumar","last_name":"Dey","first_name":"Bikash Kumar"},{"full_name":"Jaggi, Sidharth","first_name":"Sidharth","last_name":"Jaggi"},{"full_name":"Langberg, Michael","first_name":"Michael","last_name":"Langberg"},{"first_name":"Anand D.","last_name":"Sarwate","full_name":"Sarwate, Anand D."},{"first_name":"Yihan","orcid":"0000-0002-6465-6258","last_name":"Zhang","id":"2ce5da42-b2ea-11eb-bba5-9f264e9d002c","full_name":"Zhang, Yihan"}],"page":"300-588","publication_status":"published","year":"2024","month":"12","issue":"3-4","volume":21,"abstract":[{"text":"Over the last 70 years, information theory and coding has enabled communication technologies that have had an astounding impact on our lives. This is possible due to the match between encoding/decoding strategies and corresponding channel models. Traditional studies of channels have taken one of two extremes: Shannon-theoretic models are inherently average-case in which channel noise is governed by a memoryless stochastic process, whereas coding-theoretic (referred to as “Hamming”) models take a worst-case, adversarial, view of the noise. However, for several existing and emerging communication systems the Shannon/average-case view may be too optimistic, whereas the Hamming/worstcase view may be too pessimistic. This monograph takes up the challenge of studying adversarial channel models that lie between the Shannon and Hamming extremes.","lang":"eng"}],"status":"public","oa_version":"None","scopus_import":"1","date_created":"2024-12-15T23:01:50Z","publication":"Foundations and Trends in Communications and Information Theory","type":"journal_article","corr_author":"1","article_type":"original","citation":{"ama":"Dey BK, Jaggi S, Langberg M, Sarwate AD, Zhang Y. Codes for adversaries: Between worst-case and average-case jamming. <i>Foundations and Trends in Communications and Information Theory</i>. 2024;21(3-4):300-588. doi:<a href=\"https://doi.org/10.1561/0100000112\">10.1561/0100000112</a>","ista":"Dey BK, Jaggi S, Langberg M, Sarwate AD, Zhang Y. 2024. Codes for adversaries: Between worst-case and average-case jamming. Foundations and Trends in Communications and Information Theory. 21(3–4), 300–588.","ieee":"B. K. Dey, S. Jaggi, M. Langberg, A. D. Sarwate, and Y. Zhang, “Codes for adversaries: Between worst-case and average-case jamming,” <i>Foundations and Trends in Communications and Information Theory</i>, vol. 21, no. 3–4. Now Publishers, pp. 300–588, 2024.","apa":"Dey, B. K., Jaggi, S., Langberg, M., Sarwate, A. D., &#38; Zhang, Y. (2024). Codes for adversaries: Between worst-case and average-case jamming. <i>Foundations and Trends in Communications and Information Theory</i>. Now Publishers. <a href=\"https://doi.org/10.1561/0100000112\">https://doi.org/10.1561/0100000112</a>","short":"B.K. Dey, S. Jaggi, M. Langberg, A.D. Sarwate, Y. Zhang, Foundations and Trends in Communications and Information Theory 21 (2024) 300–588.","mla":"Dey, Bikash Kumar, et al. “Codes for Adversaries: Between Worst-Case and Average-Case Jamming.” <i>Foundations and Trends in Communications and Information Theory</i>, vol. 21, no. 3–4, Now Publishers, 2024, pp. 300–588, doi:<a href=\"https://doi.org/10.1561/0100000112\">10.1561/0100000112</a>.","chicago":"Dey, Bikash Kumar, Sidharth Jaggi, Michael Langberg, Anand D. Sarwate, and Yihan Zhang. “Codes for Adversaries: Between Worst-Case and Average-Case Jamming.” <i>Foundations and Trends in Communications and Information Theory</i>. Now Publishers, 2024. <a href=\"https://doi.org/10.1561/0100000112\">https://doi.org/10.1561/0100000112</a>."},"language":[{"iso":"eng"}],"date_updated":"2024-12-16T10:38:44Z","intvolume":"        21","OA_type":"closed access","publication_identifier":{"issn":["1567-2190"],"eissn":["1567-2328"]},"article_processing_charge":"No","title":"Codes for adversaries: Between worst-case and average-case jamming","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","department":[{"_id":"MaMo"}],"day":"03","_id":"18652","quality_controlled":"1","date_published":"2024-12-03T00:00:00Z","publisher":"Now Publishers","doi":"10.1561/0100000112"},{"citation":{"apa":"Hickie, J., Van Straaten, B., Fedele, F., Jirovec, D., Ballabio, A., Chrastina, D., … Ares, N. (2024). Automated long-range compensation of an rf quantum dot sensor. <i>Physical Review Applied</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevApplied.22.064026\">https://doi.org/10.1103/PhysRevApplied.22.064026</a>","ista":"Hickie J, Van Straaten B, Fedele F, Jirovec D, Ballabio A, Chrastina D, Isella G, Katsaros G, Ares N. 2024. Automated long-range compensation of an rf quantum dot sensor. Physical Review Applied. 22(6), 064026.","ieee":"J. Hickie <i>et al.</i>, “Automated long-range compensation of an rf quantum dot sensor,” <i>Physical Review Applied</i>, vol. 22, no. 6. American Physical Society, 2024.","ama":"Hickie J, Van Straaten B, Fedele F, et al. Automated long-range compensation of an rf quantum dot sensor. <i>Physical Review Applied</i>. 2024;22(6). doi:<a href=\"https://doi.org/10.1103/PhysRevApplied.22.064026\">10.1103/PhysRevApplied.22.064026</a>","mla":"Hickie, Joseph, et al. “Automated Long-Range Compensation of an Rf Quantum Dot Sensor.” <i>Physical Review Applied</i>, vol. 22, no. 6, 064026, American Physical Society, 2024, doi:<a href=\"https://doi.org/10.1103/PhysRevApplied.22.064026\">10.1103/PhysRevApplied.22.064026</a>.","short":"J. Hickie, B. Van Straaten, F. Fedele, D. Jirovec, A. Ballabio, D. Chrastina, G. Isella, G. Katsaros, N. Ares, Physical Review Applied 22 (2024).","chicago":"Hickie, Joseph, Barnaby Van Straaten, Federico Fedele, Daniel Jirovec, Andrea Ballabio, Daniel Chrastina, Giovanni Isella, Georgios Katsaros, and Natalia Ares. “Automated Long-Range Compensation of an Rf Quantum Dot Sensor.” <i>Physical Review Applied</i>. American Physical Society, 2024. <a href=\"https://doi.org/10.1103/PhysRevApplied.22.064026\">https://doi.org/10.1103/PhysRevApplied.22.064026</a>."},"article_type":"original","language":[{"iso":"eng"}],"oa_version":"Published Version","scopus_import":"1","date_created":"2024-12-15T23:01:50Z","publication":"Physical Review Applied","type":"journal_article","abstract":[{"lang":"eng","text":"Charge sensing is a sensitive technique for probing quantum devices, of particular importance for spin-qubit readout. To achieve good readout sensitivities, the proximity of the charge sensor to the device to be measured is a necessity. However, this proximity also means that the operation of the device affects, in turn, the sensor tuning and ultimately the readout sensitivity. We present an approach for compensating for this crosstalk effect allowing for the gate voltages of the measured device to be swept in a 1-V × 1-V window while maintaining a sensor configuration chosen by a Bayesian optimizer. Our algorithm will hopefully be a major contribution to the suite of fully automated solutions required for the operation of large quantum device architectures."}],"status":"public","has_accepted_license":"1","external_id":{"isi":["001379155900003"]},"OA_type":"hybrid","project":[{"grant_number":"I05060","name":"High impedance circuit quantum electrodynamics with hole spins","_id":"c0977eea-5a5b-11eb-8a69-a862db0cf4d1"},{"_id":"34c0acea-11ca-11ed-8bc3-8775e10fd452","name":"Integrated Germanium Quantum Technology","grant_number":"101069515"}],"intvolume":"        22","OA_place":"publisher","date_updated":"2025-09-09T11:47:52Z","ddc":["530"],"acknowledged_ssus":[{"_id":"NanoFab"}],"author":[{"full_name":"Hickie, Joseph","last_name":"Hickie","first_name":"Joseph"},{"last_name":"Van Straaten","first_name":"Barnaby","full_name":"Van Straaten, Barnaby"},{"full_name":"Fedele, Federico","first_name":"Federico","last_name":"Fedele"},{"orcid":"0000-0002-7197-4801","first_name":"Daniel","last_name":"Jirovec","full_name":"Jirovec, Daniel","id":"4C473F58-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Ballabio","first_name":"Andrea","full_name":"Ballabio, Andrea"},{"first_name":"Daniel","last_name":"Chrastina","full_name":"Chrastina, Daniel"},{"first_name":"Giovanni","last_name":"Isella","full_name":"Isella, Giovanni"},{"full_name":"Katsaros, Georgios","id":"38DB5788-F248-11E8-B48F-1D18A9856A87","last_name":"Katsaros","orcid":"0000-0001-8342-202X","first_name":"Georgios"},{"full_name":"Ares, Natalia","first_name":"Natalia","last_name":"Ares"}],"issue":"6","volume":22,"month":"12","year":"2024","file_date_updated":"2024-12-16T11:13:48Z","publication_status":"published","date_published":"2024-12-01T00:00:00Z","_id":"18653","quality_controlled":"1","article_number":"064026","isi":1,"acknowledgement":"We thank Nicholas Sim for providing help with the experiment and Sebastian Orbell for helpful discussions. This work was supported by the Royal Society, the Engineering and Physical Sciences Research Council (EPSRC) National Quantum Technology Hub in Networked Quantum Information Technology (Grant No. EP/M013243/1), Quantum Technology Capital (Grant No. EP/N014995/1), the EPSRC Platform Grant (Grant No. EP/R029229/1), the European Research Council (Grant Agreement No. 948932), the Scientific Service Units of the Institute of Science and Technology Austria through resources provided by the nanofabrication facility and, the FWF-I 05060 and HORIZON-RIA 101069515 projects.","doi":"10.1103/PhysRevApplied.22.064026","file":[{"date_created":"2024-12-16T11:13:48Z","content_type":"application/pdf","relation":"main_file","creator":"dernst","access_level":"open_access","success":1,"checksum":"bc29a40819abc4969867b6cd6563f7ad","date_updated":"2024-12-16T11:13:48Z","file_name":"2024_PhysicalReviewApplied_Hickie.pdf","file_id":"18662","file_size":3560132}],"publisher":"American Physical Society","article_processing_charge":"No","publication_identifier":{"eissn":["2331-7019"]},"tmp":{"short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"day":"01","department":[{"_id":"GeKa"}],"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","oa":1,"title":"Automated long-range compensation of an rf quantum dot sensor"},{"publication_identifier":{"eissn":["2469-9969"],"issn":["2469-9950"]},"article_processing_charge":"No","department":[{"_id":"KiMo"}],"day":"15","oa":1,"title":"Scale-invariant magnetic anisotropy in α-RuCl3: A quantum Monte Carlo study","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","article_number":"L201114","_id":"18654","date_published":"2024-11-15T00:00:00Z","quality_controlled":"1","publisher":"American Physical Society","acknowledgement":"We gratefully acknowledge the Gauss Centre for Supercomputing e.V. for funding this project by providing computing time on the GCS Supercomputer SUPERMUC-NG at the Leibniz Supercomputing Centre (Project No. pn73xu) as well as the scientific support and HPC resources provided by the Erlangen National High Performance Computing Center (NHR@FAU) of the Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU) under the NHR Project b133ae. NHR funding is provided by federal and Bavarian state authorities. NHR@FAU hardware is partially funded by the German Research Foundation (DFG) – 440719683. T.S. thanks funding from the Deutsche Forschungsgemeinschaft under Grant No. SA 3986/1-1 as well as the Würzburg-Dresden Cluster of Excellence on Complexity and Topology in Quantum Matter ct.qmat (EXC 2147, Project ID 390858490). F.F.A. acknowledges financial support from the German Research Foundation (DFG) under the Grant AS 120/16-1 (Project No. 493886309) that is part of the collaborative research project SFB Q-M&S funded by the Austrian Science Fund (FWF) F 86. K.A.M. thanks financial support from the Austrian Science Fund, SFB F 86, Q-M&S.","isi":1,"doi":"10.1103/PhysRevB.110.L201114","author":[{"full_name":"Sato, Toshihiro","last_name":"Sato","first_name":"Toshihiro"},{"first_name":"B. J.","last_name":"Ramshaw","full_name":"Ramshaw, B. J."},{"full_name":"Modic, Kimberly A","id":"13C26AC0-EB69-11E9-87C6-5F3BE6697425","last_name":"Modic","orcid":"0000-0001-9760-3147","first_name":"Kimberly A"},{"first_name":"Fakher F.","last_name":"Assaad","full_name":"Assaad, Fakher F."}],"month":"11","issue":"20","volume":110,"publication_status":"published","year":"2024","citation":{"short":"T. Sato, B.J. Ramshaw, K.A. Modic, F.F. Assaad, Physical Review B 110 (2024).","mla":"Sato, Toshihiro, et al. “Scale-Invariant Magnetic Anisotropy in α-RuCl3: A Quantum Monte Carlo Study.” <i>Physical Review B</i>, vol. 110, no. 20, L201114, American Physical Society, 2024, doi:<a href=\"https://doi.org/10.1103/PhysRevB.110.L201114\">10.1103/PhysRevB.110.L201114</a>.","ista":"Sato T, Ramshaw BJ, Modic KA, Assaad FF. 2024. Scale-invariant magnetic anisotropy in α-RuCl3: A quantum Monte Carlo study. Physical Review B. 110(20), L201114.","ama":"Sato T, Ramshaw BJ, Modic KA, Assaad FF. Scale-invariant magnetic anisotropy in α-RuCl3: A quantum Monte Carlo study. <i>Physical Review B</i>. 2024;110(20). doi:<a href=\"https://doi.org/10.1103/PhysRevB.110.L201114\">10.1103/PhysRevB.110.L201114</a>","ieee":"T. Sato, B. J. Ramshaw, K. A. Modic, and F. F. Assaad, “Scale-invariant magnetic anisotropy in α-RuCl3: A quantum Monte Carlo study,” <i>Physical Review B</i>, vol. 110, no. 20. American Physical Society, 2024.","apa":"Sato, T., Ramshaw, B. J., Modic, K. A., &#38; Assaad, F. F. (2024). Scale-invariant magnetic anisotropy in α-RuCl3: A quantum Monte Carlo study. <i>Physical Review B</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevB.110.L201114\">https://doi.org/10.1103/PhysRevB.110.L201114</a>","chicago":"Sato, Toshihiro, B. J. Ramshaw, Kimberly A Modic, and Fakher F. Assaad. “Scale-Invariant Magnetic Anisotropy in α-RuCl3: A Quantum Monte Carlo Study.” <i>Physical Review B</i>. American Physical Society, 2024. <a href=\"https://doi.org/10.1103/PhysRevB.110.L201114\">https://doi.org/10.1103/PhysRevB.110.L201114</a>."},"article_type":"letter_note","language":[{"iso":"eng"}],"abstract":[{"lang":"eng","text":"We compute the rotational anisotropy of the free energy of 𝛼−RuCl3 in an external magnetic field. This quantity, known as the magnetotropic susceptibility, 𝑘, relates to the second derivative of the free energy with respect to the angle of rotation. We have used approximation-free, auxiliary-field quantum Monte Carlo simulations for a realistic model of 𝛼−RuCl3 and optimized the path integral to alleviate the negative sign problem. This allows us to reach temperatures down to 30K—an energy scale below the dominant Kitaev coupling. We demonstrate that the magnetotropic spin susceptibility in this model of 𝛼−RuCl3 displays scaling behavior 𝑘=𝑇⁢𝑓⁡(𝐵/𝑇) at high temperatures. Once the uniform susceptibility departs from the Curie law (i.e., at the energy scale of the exchange interactions), it appears to transition to an emergent scalinglike behavior, characterized by a different function 𝑓 at lower temperatures, stemming from the locality of torque fluctuations. We observe a remarkable numerical match between experiment and simulations and we also find qualitative agreement with the pure Kitaev model. In comparison, for the XXZ Heisenberg Hamiltonian, the scaling 𝑘=𝑇⁢𝑓⁡(𝐵/𝑇) breaks down at a temperature scale where the uniform spin susceptibility deviates from the Curie law and never reemerges at low temperatures."}],"external_id":{"arxiv":["2312.03080"],"isi":["001447562900001"]},"status":"public","scopus_import":"1","date_created":"2024-12-15T23:01:50Z","oa_version":"Preprint","publication":"Physical Review B","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2312.03080"}],"type":"journal_article","OA_type":"green","project":[{"grant_number":"F8607","_id":"34ac8b51-11ca-11ed-8bc3-86c15daa9f8f","name":"Center for Correlated Quantum Materials and Solid State Quantum Systems: Scale- invariance in entangled quantum spin systems"}],"date_updated":"2025-09-09T11:48:35Z","arxiv":1,"intvolume":"       110","OA_place":"repository"},{"oa_version":"Published Version","scopus_import":"1","publication":"Electronic Communications in Probability","date_created":"2024-12-15T23:01:51Z","type":"journal_article","corr_author":"1","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2311.16631","open_access":"1"}],"abstract":[{"lang":"eng","text":"Let Qd be the d-dimensional binary hypercube. We say that P={v1,…,vk} is an increasing path of length k−1 in Qd, if for every i∈[k−1] the edge vivi+1 is obtained by switching some zero coordinate in vi to a one coordinate in vi+1.\r\nForm a random subgraph Qdp by retaining each edge in E(Qd) independently with probability p. We show that there is a phase transition with respect to the length of a longest increasing path around p=ed. Let α be a constant and let p=αd. When α<e, then there exists a δ∈[0,1) such that whp a longest increasing path in Qdp is of length at most δd. On the other hand, when α>e, whp there is a path of length d−2 in Qdp, and in fact, whether it is of length d−2,d−1, or d depends on whether the all-zero and all-one vertices percolate or not."}],"external_id":{"isi":["001356019700001"],"arxiv":["2311.16631"]},"has_accepted_license":"1","status":"public","DOAJ_listed":"1","citation":{"mla":"Anastos, Michael, et al. “Climbing up a Random Subgraph of the Hypercube.” <i>Electronic Communications in Probability</i>, vol. 29, 70, Duke University Press, 2024, doi:<a href=\"https://doi.org/10.1214/24-ECP639\">10.1214/24-ECP639</a>.","short":"M. Anastos, S. Diskin, D. Elboim, M. Krivelevich, Electronic Communications in Probability 29 (2024).","apa":"Anastos, M., Diskin, S., Elboim, D., &#38; Krivelevich, M. (2024). Climbing up a random subgraph of the hypercube. <i>Electronic Communications in Probability</i>. Duke University Press. <a href=\"https://doi.org/10.1214/24-ECP639\">https://doi.org/10.1214/24-ECP639</a>","ista":"Anastos M, Diskin S, Elboim D, Krivelevich M. 2024. Climbing up a random subgraph of the hypercube. Electronic Communications in Probability. 29, 70.","ama":"Anastos M, Diskin S, Elboim D, Krivelevich M. Climbing up a random subgraph of the hypercube. <i>Electronic Communications in Probability</i>. 2024;29. doi:<a href=\"https://doi.org/10.1214/24-ECP639\">10.1214/24-ECP639</a>","ieee":"M. Anastos, S. Diskin, D. Elboim, and M. Krivelevich, “Climbing up a random subgraph of the hypercube,” <i>Electronic Communications in Probability</i>, vol. 29. Duke University Press, 2024.","chicago":"Anastos, Michael, Sahar Diskin, Dor Elboim, and Michael Krivelevich. “Climbing up a Random Subgraph of the Hypercube.” <i>Electronic Communications in Probability</i>. Duke University Press, 2024. <a href=\"https://doi.org/10.1214/24-ECP639\">https://doi.org/10.1214/24-ECP639</a>."},"article_type":"original","ec_funded":1,"language":[{"iso":"eng"}],"OA_place":"repository","intvolume":"        29","date_updated":"2025-09-09T11:46:53Z","arxiv":1,"ddc":["510"],"project":[{"call_identifier":"H2020","_id":"fc2ed2f7-9c52-11eb-aca3-c01059dda49c","name":"IST-BRIDGE: International postdoctoral program","grant_number":"101034413"}],"OA_type":"gold","author":[{"last_name":"Anastos","first_name":"Michael","full_name":"Anastos, Michael","id":"0b2a4358-bb35-11ec-b7b9-e3279b593dbb"},{"last_name":"Diskin","first_name":"Sahar","full_name":"Diskin, Sahar"},{"full_name":"Elboim, Dor","first_name":"Dor","last_name":"Elboim"},{"first_name":"Michael","last_name":"Krivelevich","full_name":"Krivelevich, Michael"}],"year":"2024","file_date_updated":"2024-12-16T07:33:34Z","publication_status":"published","volume":29,"month":"11","_id":"18655","date_published":"2024-11-24T00:00:00Z","quality_controlled":"1","article_number":"70","file":[{"relation":"main_file","creator":"dernst","access_level":"open_access","content_type":"application/pdf","date_created":"2024-12-16T07:33:34Z","file_size":530169,"checksum":"307a9d049325e6ca9bfe8b4a1f275983","success":1,"date_updated":"2024-12-16T07:33:34Z","file_id":"18657","file_name":"2024_ElectrCommProbability_Anastos.pdf"}],"isi":1,"doi":"10.1214/24-ECP639","acknowledgement":"Research supported by the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No. 101034413.\r\nThe authors wish to thank Ross Pinsky for his comments on an earlier version of the paper, and for bringing reference [12] to our attention. The authors are grateful to the anonymous referees for their helpful comments and suggestions.","publisher":"Duke University Press","article_processing_charge":"Yes","publication_identifier":{"eissn":["1083-589X"]},"tmp":{"short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","oa":1,"title":"Climbing up a random subgraph of the hypercube","day":"24","department":[{"_id":"MaKw"}]},{"month":"08","related_material":{"record":[{"relation":"dissertation_contains","status":"public","id":"18667"}]},"publication_status":"draft","year":"2024","author":[{"orcid":"0000-0002-9823-6833","first_name":"Herbert","last_name":"Edelsbrunner","full_name":"Edelsbrunner, Herbert","id":"3FB178DA-F248-11E8-B48F-1D18A9856A87"},{"id":"4879BB4E-F248-11E8-B48F-1D18A9856A87","full_name":"Heiss, Teresa","last_name":"Heiss","first_name":"Teresa","orcid":"0000-0002-1780-2689"}],"project":[{"_id":"266A2E9E-B435-11E9-9278-68D0E5697425","name":"Alpha Shape Theory Extended","call_identifier":"H2020","grant_number":"788183"},{"grant_number":"I02979-N35","name":"Persistence and stability of geometric complexes","call_identifier":"FWF","_id":"2561EBF4-B435-11E9-9278-68D0E5697425"}],"date_updated":"2026-04-07T12:54:09Z","arxiv":1,"OA_place":"repository","citation":{"chicago":"Edelsbrunner, Herbert, and Teresa Heiss. “Merge Trees of Periodic Filtrations.” <i>ArXiv</i>, n.d. <a href=\"https://doi.org/10.48550/arXiv.2408.16575\">https://doi.org/10.48550/arXiv.2408.16575</a>.","short":"H. Edelsbrunner, T. Heiss, ArXiv (n.d.).","mla":"Edelsbrunner, Herbert, and Teresa Heiss. “Merge Trees of Periodic Filtrations.” <i>ArXiv</i>, doi:<a href=\"https://doi.org/10.48550/arXiv.2408.16575\">10.48550/arXiv.2408.16575</a>.","ama":"Edelsbrunner H, Heiss T. Merge trees of periodic filtrations. <i>arXiv</i>. doi:<a href=\"https://doi.org/10.48550/arXiv.2408.16575\">10.48550/arXiv.2408.16575</a>","ieee":"H. Edelsbrunner and T. Heiss, “Merge trees of periodic filtrations,” <i>arXiv</i>. .","ista":"Edelsbrunner H, Heiss T. Merge trees of periodic filtrations. arXiv, <a href=\"https://doi.org/10.48550/arXiv.2408.16575\">10.48550/arXiv.2408.16575</a>.","apa":"Edelsbrunner, H., &#38; Heiss, T. (n.d.). Merge trees of periodic filtrations. <i>arXiv</i>. <a href=\"https://doi.org/10.48550/arXiv.2408.16575\">https://doi.org/10.48550/arXiv.2408.16575</a>"},"ec_funded":1,"language":[{"iso":"eng"}],"abstract":[{"text":"Motivated by applications to crystalline materials, we generalize the merge tree and the related barcode of a filtered complex to the periodic setting in Euclidean space. They are invariant under isometries, changing bases, and indeed changing lattices. In addition, we prove stability under perturbations and provide an algorithm that under mild geometric conditions typically satisfied by crystalline materials takes O((n+m)logn) time, in which n and m are the numbers of vertices and edges in the quotient complex, respectively.\r\n","lang":"eng"}],"status":"public","external_id":{"arxiv":["2408.16575"]},"publication":"arXiv","date_created":"2024-12-18T14:06:57Z","oa_version":"Preprint","type":"preprint","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2408.16575","open_access":"1"}],"corr_author":"1","department":[{"_id":"HeEd"}],"day":"29","oa":1,"title":"Merge trees of periodic filtrations","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","tmp":{"short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"article_processing_charge":"No","doi":"10.48550/arXiv.2408.16575","acknowledgement":"Both authors are partially supported by the European Research Council (ERC) Horizon 2020 project\r\n‘Alpha Shape Theory Extended’, grant no. 788183. The first author is also partially supported by the DFG\r\nCollaborative Research Center TRR 109, ‘Discretization in Geometry and Dynamics’, Austrian Science Fund\r\n(FWF), grant no. I 02979-N35.","_id":"18673","date_published":"2024-08-29T00:00:00Z"},{"publication_status":"published","file_date_updated":"2024-12-18T14:41:53Z","year":"2024","month":"12","related_material":{"record":[{"relation":"part_of_dissertation","id":"11160","status":"public"},{"status":"public","id":"18677","relation":"part_of_dissertation"},{"id":"13267","status":"public","relation":"part_of_dissertation"},{"relation":"part_of_dissertation","status":"public","id":"14257"}]},"acknowledged_ssus":[{"_id":"Bio"}],"author":[{"last_name":"Lyudchik","first_name":"Julia","id":"46E28B80-F248-11E8-B48F-1D18A9856A87","full_name":"Lyudchik, Julia"}],"alternative_title":["ISTA Thesis"],"page":"217","date_updated":"2026-04-14T08:34:35Z","ddc":["004"],"OA_place":"publisher","project":[{"grant_number":"665385","call_identifier":"H2020","_id":"2564DBCA-B435-11E9-9278-68D0E5697425","name":"International IST Doctoral Program"}],"abstract":[{"text":"Mapping the complex and dense arrangement of cells and their connectivity in brain tissue requires volumetric imaging at nanoscale spatial resolution. While light microscopy excels at visualizing specific molecules and individual cells, achieving dense, synapse-level circuit reconstruction has not been possible with any light microscopy technique. Thus, the goal of my work was to develop image and data analysis pipelines for brain tissue visualization and reconstruction with light microscopy. To achieve dense circuit reconstruction with single-synapse resolution, I developed both conventional and deep-learning-based synapse detection algorithms, as well as connectivity analysis pipelines that integrate synapse detection with volumetric segmentation of brain tissue.","lang":"eng"}],"has_accepted_license":"1","status":"public","oa_version":"Published Version","date_created":"2024-12-18T14:24:43Z","type":"dissertation","corr_author":"1","citation":{"short":"J. Lyudchik, Image Analysis for Brain Tissue Reconstruction with Super-Resolution Light Microscopy, Institute of Science and Technology Austria, 2024.","mla":"Lyudchik, Julia. <i>Image Analysis for Brain Tissue Reconstruction with Super-Resolution Light Microscopy</i>. Institute of Science and Technology Austria, 2024, doi:<a href=\"https://doi.org/10.15479/at:ista:18674\">10.15479/at:ista:18674</a>.","ama":"Lyudchik J. Image analysis for brain tissue reconstruction with super-resolution light microscopy. 2024. doi:<a href=\"https://doi.org/10.15479/at:ista:18674\">10.15479/at:ista:18674</a>","ista":"Lyudchik J. 2024. Image analysis for brain tissue reconstruction with super-resolution light microscopy. Institute of Science and Technology Austria.","ieee":"J. Lyudchik, “Image analysis for brain tissue reconstruction with super-resolution light microscopy,” Institute of Science and Technology Austria, 2024.","apa":"Lyudchik, J. (2024). <i>Image analysis for brain tissue reconstruction with super-resolution light microscopy</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/at:ista:18674\">https://doi.org/10.15479/at:ista:18674</a>","chicago":"Lyudchik, Julia. “Image Analysis for Brain Tissue Reconstruction with Super-Resolution Light Microscopy.” Institute of Science and Technology Austria, 2024. <a href=\"https://doi.org/10.15479/at:ista:18674\">https://doi.org/10.15479/at:ista:18674</a>."},"ec_funded":1,"language":[{"iso":"eng"}],"oa":1,"title":"Image analysis for brain tissue reconstruction with super-resolution light microscopy","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","department":[{"_id":"GradSch"},{"_id":"JoDa"}],"day":"18","publication_identifier":{"issn":["2663-337X"],"isbn":[" 978-3-99078-051-0"]},"tmp":{"short":"CC BY-NC-ND (4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","image":"/images/cc_by_nc_nd.png"},"article_processing_charge":"No","degree_awarded":"PhD","publisher":"Institute of Science and Technology Austria","file":[{"checksum":"1b42b8073e2bc09fc504da52372248c1","success":1,"file_id":"18675","file_name":"18122024_PhDthesis_corrected_final_pdfa.pdf","date_updated":"2024-12-18T14:17:34Z","file_size":160536833,"content_type":"application/pdf","date_created":"2024-12-18T14:17:34Z","creator":"jlyudchi","relation":"main_file","access_level":"open_access"},{"file_name":"18122024_PhDthesis_corrected_final_JL_markup.docx","file_id":"18676","date_updated":"2024-12-18T14:41:53Z","checksum":"b4da84624060745519723698f7ddf54b","file_size":99172203,"date_created":"2024-12-18T14:21:06Z","content_type":"application/vnd.openxmlformats-officedocument.wordprocessingml.document","access_level":"closed","creator":"jlyudchi","relation":"source_file"}],"doi":"10.15479/at:ista:18674","supervisor":[{"orcid":"0000-0001-8559-3973","first_name":"Johann G","last_name":"Danzl","full_name":"Danzl, Johann G","id":"42EFD3B6-F248-11E8-B48F-1D18A9856A87"}],"_id":"18674","date_published":"2024-12-18T00:00:00Z"},{"publisher":"American Physical Society","doi":"10.1103/PhysRevE.110.064403","isi":1,"acknowledgement":"We thank Markus Mund, Aline Tschanz, and Jonas Ries for helpful discussions and a critical reading of the manuscript. We also kindly acknowledge Simon Scheuring for providing the HS-AFM data for the analysis of clathrin coat invagination. We thank the reviewers of previous versions of this manuscript for useful feedback that helped us to improve this work. F.F. acknowledges financial support by the NOMIS foundation. U.S.S. was supported by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Project No. 240245660 (SFB 1129). Moreover, he is a member of the Interdisciplinary Center for Scientific Computing (IWR) at Heidelberg and of the Max Planck School Matter to Life supported by the German Federal Ministry of Education and Research (BMBF) in collaboration with the Max Planck Society.","article_number":"064403","date_published":"2024-12-10T00:00:00Z","_id":"18704","quality_controlled":"1","department":[{"_id":"AnSa"}],"day":"10","title":"Coat stiffening can explain invagination of clathrin-coated membranes","oa":1,"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","publication_identifier":{"eissn":["2470-0053"],"issn":["2470-0045"]},"article_processing_charge":"No","OA_type":"green","arxiv":1,"date_updated":"2025-09-09T11:56:34Z","OA_place":"repository","intvolume":"       110","language":[{"iso":"eng"}],"article_type":"original","citation":{"chicago":"Frey, Felix F, and Ulrich S. Schwarz. “Coat Stiffening Can Explain Invagination of Clathrin-Coated Membranes.” <i>Physical Review E</i>. American Physical Society, 2024. <a href=\"https://doi.org/10.1103/PhysRevE.110.064403\">https://doi.org/10.1103/PhysRevE.110.064403</a>.","apa":"Frey, F. F., &#38; Schwarz, U. S. (2024). Coat stiffening can explain invagination of clathrin-coated membranes. <i>Physical Review E</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevE.110.064403\">https://doi.org/10.1103/PhysRevE.110.064403</a>","ama":"Frey FF, Schwarz US. Coat stiffening can explain invagination of clathrin-coated membranes. <i>Physical Review E</i>. 2024;110(6). doi:<a href=\"https://doi.org/10.1103/PhysRevE.110.064403\">10.1103/PhysRevE.110.064403</a>","ieee":"F. F. Frey and U. S. Schwarz, “Coat stiffening can explain invagination of clathrin-coated membranes,” <i>Physical Review E</i>, vol. 110, no. 6. American Physical Society, 2024.","ista":"Frey FF, Schwarz US. 2024. Coat stiffening can explain invagination of clathrin-coated membranes. Physical Review E. 110(6), 064403.","mla":"Frey, Felix F., and Ulrich S. Schwarz. “Coat Stiffening Can Explain Invagination of Clathrin-Coated Membranes.” <i>Physical Review E</i>, vol. 110, no. 6, 064403, American Physical Society, 2024, doi:<a href=\"https://doi.org/10.1103/PhysRevE.110.064403\">10.1103/PhysRevE.110.064403</a>.","short":"F.F. Frey, U.S. Schwarz, Physical Review E 110 (2024)."},"status":"public","external_id":{"isi":["001379135100004"],"pmid":["39916158"],"arxiv":["2405.02820"]},"abstract":[{"text":"Clathrin-mediated endocytosis is the main pathway used by eukaryotic cells to take up extracellular material, but the dominant physical mechanisms driving this process are still elusive. Recently, several high-resolution imaging techniques have been used on different cell lines to measure the geometrical properties of clathrin-coated pits over their whole lifetime. Here, we first show that the combination of all datasets with the recently introduced cooperative curvature model defines a consensus pathway, which is characterized by a flat-to-curved transition at finite area, followed by linear growth and subsequent saturation of curvature. We then apply an energetic model for the composite of the plasma membrane and clathrin coat to this consensus pathway to show that the dominant mechanism for invagination could be coat stiffening, which might originate from cooperative interactions between the different clathrin molecules and progressively drives the system toward its intrinsic curvature. Our theory predicts that two length scales determine the invagination pathway, namely the patch size at which the flat-to-curved transition occurs and the final pit radius.","lang":"eng"}],"main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2405.02820"}],"type":"journal_article","oa_version":"Preprint","publication":"Physical Review E","date_created":"2024-12-22T23:01:48Z","scopus_import":"1","month":"12","volume":110,"issue":"6","publication_status":"published","year":"2024","pmid":1,"author":[{"full_name":"Frey, Felix F","id":"a0270b37-8f1a-11ec-95c7-8e710c59a4f3","orcid":"0000-0001-8501-6017","first_name":"Felix F","last_name":"Frey"},{"full_name":"Schwarz, Ulrich S.","first_name":"Ulrich S.","last_name":"Schwarz"}]},{"publisher":"Springer Nature","isi":1,"file":[{"creator":"dernst","relation":"main_file","access_level":"open_access","content_type":"application/pdf","date_created":"2025-01-02T08:49:13Z","file_size":1927871,"success":1,"checksum":"6b3148315a444835113c32b399010370","file_id":"18717","file_name":"2024_npjclimate_Paik.pdf","date_updated":"2025-01-02T08:49:13Z"}],"acknowledgement":"This study was supported by the National Research Foundation of Korea (NRF) grant funded by the Korean government (MSIT) (NRF-2018R1A5A1024958, NRF-2021R1C1C2094185, RS-2024-00336160). Model simulation and data transfer were supported by the National Supercomputing Center with supercomputing resources including technical support (KSC-2021-CHA-0030), the National Center for Meteorological Supercomputer of the Korea Meteorological Administration (KMA), and by the Korea Research Environment Open NETwork (KREONET), respectively. DK was supported by New Faculty Startup Fund from Seoul National University. We acknowledge the World Climate Research Programme, which, through its Working Group on Coupled Modelling, coordinated and promoted CMIP6. We thank the climate modeling groups for producing and making available their model output, the Earth System Grid Federation (ESGF) for archiving the data and providing access (https://esgf-node.llnl.gov/projects/cmip6/), and the multiple funding agencies who support CMIP6 and ESGF.","doi":"10.1038/s41612-024-00858-0","article_number":"305","_id":"18708","quality_controlled":"1","date_published":"2024-12-19T00:00:00Z","department":[{"_id":"CaMu"}],"day":"19","title":"Exploring causes of distinct regional and subseasonal Indian summer monsoon precipitation responses to CO2 removal","oa":1,"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","tmp":{"short":"CC BY-NC-ND (4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","image":"/images/cc_by_nc_nd.png"},"publication_identifier":{"eissn":["2397-3722"]},"article_processing_charge":"Yes","OA_type":"gold","ddc":["550"],"date_updated":"2025-09-09T11:51:56Z","OA_place":"publisher","intvolume":"         7","language":[{"iso":"eng"}],"citation":{"chicago":"Paik, Seungmok, Daehyun Kim, Soon Il An, Hyoeun Oh, Jongsoo Shin, BIDYUT B GOSWAMI, Seung Ki Min, and Sanjit Kumar Mondal. “Exploring Causes of Distinct Regional and Subseasonal Indian Summer Monsoon Precipitation Responses to CO2 Removal.” <i>Npj Climate and Atmospheric Science</i>. Springer Nature, 2024. <a href=\"https://doi.org/10.1038/s41612-024-00858-0\">https://doi.org/10.1038/s41612-024-00858-0</a>.","ista":"Paik S, Kim D, An SI, Oh H, Shin J, GOSWAMI BB, Min SK, Mondal SK. 2024. Exploring causes of distinct regional and subseasonal Indian summer monsoon precipitation responses to CO2 removal. npj Climate and Atmospheric Science. 7, 305.","ama":"Paik S, Kim D, An SI, et al. Exploring causes of distinct regional and subseasonal Indian summer monsoon precipitation responses to CO2 removal. <i>npj Climate and Atmospheric Science</i>. 2024;7. doi:<a href=\"https://doi.org/10.1038/s41612-024-00858-0\">10.1038/s41612-024-00858-0</a>","ieee":"S. Paik <i>et al.</i>, “Exploring causes of distinct regional and subseasonal Indian summer monsoon precipitation responses to CO2 removal,” <i>npj Climate and Atmospheric Science</i>, vol. 7. Springer Nature, 2024.","apa":"Paik, S., Kim, D., An, S. I., Oh, H., Shin, J., GOSWAMI, B. B., … Mondal, S. K. (2024). Exploring causes of distinct regional and subseasonal Indian summer monsoon precipitation responses to CO2 removal. <i>Npj Climate and Atmospheric Science</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41612-024-00858-0\">https://doi.org/10.1038/s41612-024-00858-0</a>","short":"S. Paik, D. Kim, S.I. An, H. Oh, J. Shin, B.B. GOSWAMI, S.K. Min, S.K. Mondal, Npj Climate and Atmospheric Science 7 (2024).","mla":"Paik, Seungmok, et al. “Exploring Causes of Distinct Regional and Subseasonal Indian Summer Monsoon Precipitation Responses to CO2 Removal.” <i>Npj Climate and Atmospheric Science</i>, vol. 7, 305, Springer Nature, 2024, doi:<a href=\"https://doi.org/10.1038/s41612-024-00858-0\">10.1038/s41612-024-00858-0</a>."},"article_type":"original","DOAJ_listed":"1","status":"public","has_accepted_license":"1","external_id":{"isi":["001381218300007"]},"abstract":[{"lang":"eng","text":"This study investigates the response of Indian summer monsoon (ISM) precipitation to CO2 removal, with a specific focus on regional and subseasonal variations. Following CO2 removal, monsoon circulation weakens throughout the summer owing to the reduced large-scale meridional temperature gradient around India. Weakened monsoon circulation decreases the local-scale thermodynamic stability within India, following monsoon-onset periods. While the frequency of synoptic-scale ISM low-pressure systems (LPSs) decreases overall, the lower thermodynamic stability causes the LPSs to form and resultantly shift west and south from their typical paths, last longer and move more quickly zonally during August and September. Changes in these rain-producing processes induce distinct regional (Western Ghats, south-central-east India, and Tamil Nadu) and subseasonal precipitation responses. Also, extreme precipitation exhibits similar patterns, but is more strongly affected by changes in LPS. Our results suggest that reliable future projections of regional hydroclimate change require a more accurate understanding of multi-scale precipitation processes."}],"type":"journal_article","oa_version":"Published Version","date_created":"2024-12-29T23:01:57Z","publication":"npj Climate and Atmospheric Science","scopus_import":"1","month":"12","volume":7,"file_date_updated":"2025-01-02T08:49:13Z","publication_status":"published","year":"2024","author":[{"full_name":"Paik, Seungmok","last_name":"Paik","first_name":"Seungmok"},{"first_name":"Daehyun","last_name":"Kim","full_name":"Kim, Daehyun"},{"first_name":"Soon Il","last_name":"An","full_name":"An, Soon Il"},{"last_name":"Oh","first_name":"Hyoeun","full_name":"Oh, Hyoeun"},{"full_name":"Shin, Jongsoo","first_name":"Jongsoo","last_name":"Shin"},{"id":"3a4ac09c-6d61-11ec-bf66-884cde66b64b","full_name":"Goswami, Bidyut B","first_name":"Bidyut B","orcid":"0000-0001-8602-3083","last_name":"Goswami"},{"first_name":"Seung Ki","last_name":"Min","full_name":"Min, Seung Ki"},{"full_name":"Mondal, Sanjit Kumar","first_name":"Sanjit Kumar","last_name":"Mondal"}]},{"article_processing_charge":"No","publication_identifier":{"issn":["0004-6280"]},"tmp":{"name":"Creative Commons Attribution 3.0 Unported (CC BY 3.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/3.0/legalcode","short":"CC BY (3.0)"},"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","oa":1,"title":"The companion mass distribution of post common envelope hot subdwarf binaries: Evidence for boosted and disrupted magnetic braking?","day":"01","department":[{"_id":"IlCa"}],"_id":"18709","date_published":"2024-12-01T00:00:00Z","quality_controlled":"1","article_number":"124201","isi":1,"file":[{"file_size":7539133,"success":1,"checksum":"56fe719e26bc0c2a99ac5322791107e5","file_name":"2024_PASP_Blomberg.pdf","file_id":"18719","date_updated":"2025-01-02T09:34:25Z","creator":"dernst","relation":"main_file","access_level":"open_access","date_created":"2025-01-02T09:34:25Z","content_type":"application/pdf"}],"acknowledgement":"We thank the referee for their constructive comments. We also thank Jim Fuller and Stefan Geier for helpful discussions. The Kavli Institute for Theoretical Physics (KITP) hosted the program, \"White Dwarfs as Probes of the Evolution of Planets, Stars, the Milky Way, and the Expanding Universe,\" during which this project was initiated.\r\n\r\nThis research was supported in part by the U.S. National Science Foundation (NSF) grant AST-2307232, and in part by grants PHY-1748958 and AST-2107070.\r\n\r\nThis work has made use of data from the European Space Agency (ESA) mission Gaia (https://www.cosmos.esa.int/gaia), processed by the Gaia Data Processing and Analysis Consortium (DPAC, https://www.cosmos.esa.int/web/gaia/dpac/consortium). Funding for the DPAC has been provided by national institutions, in particular the institutions participating in the Gaia Multilateral Agreement.\r\n\r\nThis work is based in part on observations obtained with the Samuel Oschin 48 inch Telescope at the Palomar Observatory as part of the Zwicky Transient Facility project. ZTF is supported by the NSF under grant AST-1440341 and a collaboration including Caltech, IPAC, the Weizmann Institute for Science, the Oskar Klein Center at Stockholm University, the University of Maryland, the University of Washington, Deutsches Elektronen-Synchrotron and Humboldt University, Los Alamos National Laboratories, the TANGO Consortium of Taiwan, the University of Wisconsin at Milwaukee, and the Lawrence Berkeley National Laboratory. Operations are conducted by the Caltech Optical Observatories (COO), the Infrared Processing and Analysis Center (IPAC), and the University of Washington (UW).\r\n\r\nSome of the data presented herein were obtained at Keck Observatory, which is a private 501(c)3 non-profit organization operated as a scientific partnership among the California Institute of Technology, the University of California, and the National Aeronautics and Space Administration. The Observatory was made possible by the generous financial support of the W. M. Keck Foundation.","doi":"10.1088/1538-3873/ad94a2","publisher":"IOP Publishing","author":[{"full_name":"Blomberg, Lisa","first_name":"Lisa","last_name":"Blomberg"},{"last_name":"El-Badry","first_name":"Kareem","full_name":"El-Badry, Kareem"},{"first_name":"Katelyn","last_name":"Breivik","full_name":"Breivik, Katelyn"},{"id":"8ae5b6e7-2a03-11ee-914d-b58ed7a3b47d","full_name":"Caiazzo, Ilaria","last_name":"Caiazzo","first_name":"Ilaria","orcid":"0000-0002-4770-5388"},{"full_name":"Nagarajan, Pranav","first_name":"Pranav","last_name":"Nagarajan"},{"first_name":"Antonio","last_name":"Rodriguez","full_name":"Rodriguez, Antonio"},{"first_name":"Jan","last_name":"Van Roestel","full_name":"Van Roestel, Jan"},{"full_name":"Vanderbosch, Zachary P.","last_name":"Vanderbosch","first_name":"Zachary P."},{"last_name":"Yamaguchi","first_name":"Natsuko","full_name":"Yamaguchi, Natsuko"}],"year":"2024","publication_status":"published","file_date_updated":"2025-01-02T09:34:25Z","issue":"12","volume":136,"month":"12","oa_version":"Published Version","date_created":"2024-12-29T23:01:57Z","scopus_import":"1","publication":"Publications of the Astronomical Society of the Pacific","type":"journal_article","abstract":[{"text":"We measure the mass distribution of main-sequence (MS) companions to hot subdwarf B stars (sdBs) in post-common envelope binaries (PCEBs). We carried out a spectroscopic survey of 14 eclipsing systems (\"HW Vir binaries\") with orbital periods of 3.8 < Porb < 12 hr, resulting in a well-understood selection function and a near-complete sample of HW Vir binaries with G < 16. We constrain companion masses from the radial velocity curves of the sdB stars. The companion mass distribution peaks at MMS ≈ 0.15 M⊙ and drops off at MMS > 0.2 M⊙, with only two systems hosting companions above the fully convective limit. There is no correlation between Porb and MMS within the sample. A similar drop-off in the companion mass distribution of white dwarf (WD) + MS PCEBs has been attributed to disrupted magnetic braking (MB) below the fully convective limit. We compare the sdB companion mass distribution to predictions of binary evolution simulations with a range of MB laws. Because sdBs have short lifetimes compared to WDs, explaining the lack of higher-mass MS companions to sdBs with disrupted MB requires MB to be boosted by a factor of 20–100 relative to MB laws inferred from the rotation evolution of single stars. We speculate that such boosting may be a result of irradiation-driven enhancement of the MS stars' winds. An alternative possibility is that common envelope evolution favors low-mass companions in short-period orbits, but the existence of massive WD companions to sdBs with similar periods disfavors this scenario.","lang":"eng"}],"external_id":{"isi":["001379604600001"],"arxiv":["2408.15334"]},"status":"public","has_accepted_license":"1","article_type":"original","citation":{"ama":"Blomberg L, El-Badry K, Breivik K, et al. The companion mass distribution of post common envelope hot subdwarf binaries: Evidence for boosted and disrupted magnetic braking? <i>Publications of the Astronomical Society of the Pacific</i>. 2024;136(12). doi:<a href=\"https://doi.org/10.1088/1538-3873/ad94a2\">10.1088/1538-3873/ad94a2</a>","ista":"Blomberg L, El-Badry K, Breivik K, Caiazzo I, Nagarajan P, Rodriguez A, Van Roestel J, Vanderbosch ZP, Yamaguchi N. 2024. The companion mass distribution of post common envelope hot subdwarf binaries: Evidence for boosted and disrupted magnetic braking? Publications of the Astronomical Society of the Pacific. 136(12), 124201.","ieee":"L. Blomberg <i>et al.</i>, “The companion mass distribution of post common envelope hot subdwarf binaries: Evidence for boosted and disrupted magnetic braking?,” <i>Publications of the Astronomical Society of the Pacific</i>, vol. 136, no. 12. IOP Publishing, 2024.","apa":"Blomberg, L., El-Badry, K., Breivik, K., Caiazzo, I., Nagarajan, P., Rodriguez, A., … Yamaguchi, N. (2024). The companion mass distribution of post common envelope hot subdwarf binaries: Evidence for boosted and disrupted magnetic braking? <i>Publications of the Astronomical Society of the Pacific</i>. IOP Publishing. <a href=\"https://doi.org/10.1088/1538-3873/ad94a2\">https://doi.org/10.1088/1538-3873/ad94a2</a>","short":"L. Blomberg, K. El-Badry, K. Breivik, I. Caiazzo, P. Nagarajan, A. Rodriguez, J. Van Roestel, Z.P. Vanderbosch, N. Yamaguchi, Publications of the Astronomical Society of the Pacific 136 (2024).","mla":"Blomberg, Lisa, et al. “The Companion Mass Distribution of Post Common Envelope Hot Subdwarf Binaries: Evidence for Boosted and Disrupted Magnetic Braking?” <i>Publications of the Astronomical Society of the Pacific</i>, vol. 136, no. 12, 124201, IOP Publishing, 2024, doi:<a href=\"https://doi.org/10.1088/1538-3873/ad94a2\">10.1088/1538-3873/ad94a2</a>.","chicago":"Blomberg, Lisa, Kareem El-Badry, Katelyn Breivik, Ilaria Caiazzo, Pranav Nagarajan, Antonio Rodriguez, Jan Van Roestel, Zachary P. Vanderbosch, and Natsuko Yamaguchi. “The Companion Mass Distribution of Post Common Envelope Hot Subdwarf Binaries: Evidence for Boosted and Disrupted Magnetic Braking?” <i>Publications of the Astronomical Society of the Pacific</i>. IOP Publishing, 2024. <a href=\"https://doi.org/10.1088/1538-3873/ad94a2\">https://doi.org/10.1088/1538-3873/ad94a2</a>."},"language":[{"iso":"eng"}],"OA_place":"publisher","intvolume":"       136","date_updated":"2025-09-09T11:55:13Z","arxiv":1,"ddc":["520"],"OA_type":"hybrid"}]