---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
_id: '19702'
abstract:
- lang: eng
  text: Moran Birth-death process is a standard stochastic process that is used to
    model natural selection in spatially structured populations. A newly occurring
    mutation that invades a population of residents can either fixate on the whole
    population or it can go extinct due to random drift. The duration of the process
    depends not only on the total population size n, but also on the spatial structure
    of the population. In this work, we consider the Moran process with a single type
    of individuals who invade and colonize an otherwise empty environment. Mathematically,
    this corresponds to the setting where the residents have zero reproduction rate,
    thus they never reproduce. The spatial structure is represented by a graph. We
    present two main contributions. First, in contrast to the Moran process in which
    residents do reproduce, we show that the colonization time is always at most a
    polynomial function of the population size n. Namely, we show that colonization
    always takes at most 1/2n^3 - 1/2n^2 expected steps, and for each n, we identify
    the slowest graph where it takes exactly that many steps. Moreover, we establish
    a stronger bound of roughly n^2.5 steps for undirected graphs and an even stronger
    bound of roughly n^2 steps for so-called regular graphs. Second, we discuss various
    complications that one faces when attempting to measure fixation times and colonization
    times in spatially structured populations, and we propose to measure the real
    duration of the process, rather than counting the steps of the classic Moran process.
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Lenka
  full_name: Kopfová, Lenka
  id: 17691681-50b9-11ef-ad56-edf4cacb21b0
  last_name: Kopfová
- first_name: Josef
  full_name: Tkadlec, Josef
  id: 3F24CCC8-F248-11E8-B48F-1D18A9856A87
  last_name: Tkadlec
  orcid: 0000-0002-1097-9684
citation:
  ama: Kopfová L, Tkadlec J. Colonization times in Moran process on graphs. <i>PLoS
    Computational Biology</i>. 2025;21(5):e1012868. doi:<a href="https://doi.org/10.1371/journal.pcbi.1012868">10.1371/journal.pcbi.1012868</a>
  apa: Kopfová, L., &#38; Tkadlec, J. (2025). Colonization times in Moran process
    on graphs. <i>PLoS Computational Biology</i>. Public Library of Science. <a href="https://doi.org/10.1371/journal.pcbi.1012868">https://doi.org/10.1371/journal.pcbi.1012868</a>
  chicago: Kopfová, Lenka, and Josef Tkadlec. “Colonization Times in Moran Process
    on Graphs.” <i>PLoS Computational Biology</i>. Public Library of Science, 2025.
    <a href="https://doi.org/10.1371/journal.pcbi.1012868">https://doi.org/10.1371/journal.pcbi.1012868</a>.
  ieee: L. Kopfová and J. Tkadlec, “Colonization times in Moran process on graphs,”
    <i>PLoS Computational Biology</i>, vol. 21, no. 5. Public Library of Science,
    p. e1012868, 2025.
  ista: Kopfová L, Tkadlec J. 2025. Colonization times in Moran process on graphs.
    PLoS Computational Biology. 21(5), e1012868.
  mla: Kopfová, Lenka, and Josef Tkadlec. “Colonization Times in Moran Process on
    Graphs.” <i>PLoS Computational Biology</i>, vol. 21, no. 5, Public Library of
    Science, 2025, p. e1012868, doi:<a href="https://doi.org/10.1371/journal.pcbi.1012868">10.1371/journal.pcbi.1012868</a>.
  short: L. Kopfová, J. Tkadlec, PLoS Computational Biology 21 (2025) e1012868.
date_created: 2025-05-18T22:02:50Z
date_published: 2025-05-01T00:00:00Z
date_updated: 2026-10-20T09:45:59Z
day: '01'
ddc:
- '000'
department:
- _id: GradSch
doi: 10.1371/journal.pcbi.1012868
external_id:
  arxiv:
  - '2410.09476'
  isi:
  - '001481670600002'
file:
- access_level: open_access
  checksum: 73e35151eebd5064972c5a07ffdf2b69
  content_type: application/pdf
  creator: dernst
  date_created: 2025-05-19T07:45:31Z
  date_updated: 2025-05-19T07:45:31Z
  file_id: '19709'
  file_name: 2025_PloSCompBio_Kopfova.pdf
  file_size: 6805943
  relation: main_file
  success: 1
file_date_updated: 2025-05-19T07:45:31Z
fulldoi: https://doi.org/10.1371/journal.pcbi.1012868
has_accepted_license: '1'
intvolume: '        21'
isi: 1
issue: '5'
language:
- iso: eng
month: '05'
oa: 1
oa_version: Published Version
page: e1012868
publication: PLoS Computational Biology
publication_identifier:
  eissn:
  - 1553-7358
publication_status: published
publisher: Public Library of Science
quality_controlled: '1'
scopus_import: '1'
status: public
title: Colonization times in Moran process on graphs
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 21
year: '2025'
...
---
OA_place: repository
OA_type: green
_id: '22770'
article_processing_charge: No
author:
- first_name: Bingqing
  full_name: Cheng, Bingqing
  id: cbe3cda4-d82c-11eb-8dc7-8ff94289fcc9
  last_name: Cheng
  orcid: 0000-0002-3584-9632
- first_name: Daniel
  full_name: King, Daniel
  last_name: King
- first_name: Dongjin
  full_name: Kim, Dongjin
  last_name: Kim
- first_name: Peichen
  full_name: Zhong, Peichen
  last_name: Zhong
citation:
  ama: 'Cheng B, King D, Kim D, Zhong P. BingqingCheng/cace-lr-fit: V0. 2025. doi:<a
    href="https://doi.org/10.5281/zenodo.16415060">10.5281/zenodo.16415060</a>'
  apa: 'Cheng, B., King, D., Kim, D., &#38; Zhong, P. (2025). BingqingCheng/cace-lr-fit:
    V0. Zenodo. <a href="https://doi.org/10.5281/zenodo.16415060">https://doi.org/10.5281/zenodo.16415060</a>'
  chicago: 'Cheng, Bingqing, Daniel King, Dongjin Kim, and Peichen Zhong. “BingqingCheng/Cace-Lr-Fit:
    V0.” Zenodo, 2025. <a href="https://doi.org/10.5281/zenodo.16415060">https://doi.org/10.5281/zenodo.16415060</a>.'
  ieee: 'B. Cheng, D. King, D. Kim, and P. Zhong, “BingqingCheng/cace-lr-fit: V0.”
    Zenodo, 2025.'
  ista: 'Cheng B, King D, Kim D, Zhong P. 2025. BingqingCheng/cace-lr-fit: V0, Zenodo,
    <a href="https://doi.org/10.5281/zenodo.16415060">10.5281/zenodo.16415060</a>.'
  mla: 'Cheng, Bingqing, et al. <i>BingqingCheng/Cace-Lr-Fit: V0</i>. Zenodo, 2025,
    doi:<a href="https://doi.org/10.5281/zenodo.16415060">10.5281/zenodo.16415060</a>.'
  short: B. Cheng, D. King, D. Kim, P. Zhong, (2025).
date_created: 2026-08-27T12:13:55Z
date_published: 2025-07-24T00:00:00Z
date_updated: 2026-10-20T09:48:08Z
day: '24'
ddc:
- '000'
department:
- _id: BiCh
doi: 10.5281/zenodo.16415060
fulldoi: https://doi.org/10.5281/zenodo.16415060
main_file_link:
- open_access: '1'
  url: https://doi.org/10.5281/zenodo.16415061
month: '07'
oa: 1
oa_version: None
publisher: Zenodo
related_material:
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  - id: '20452'
    relation: used_in_publication
    status: public
status: public
title: 'BingqingCheng/cace-lr-fit: V0'
type: research_data_reference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
_id: '18710'
abstract:
- lang: eng
  text: We present an ab initio theoretical method to calculate the resonant Auger
    spectrum in the presence of ultrafast dissociation. The method is demonstrated
    by deriving the L-VV resonant Auger spectrum mediated by the 2p3/2−1σ* resonance
    in HCl, where the electronic Auger decay and nuclear dissociation occur on the
    same time scale. The Auger decay rates are calculated within the one-center approximation
    and are shown to vary significantly with the inter-nuclear distance. A quantum-mechanical
    description of dissociation is effectuated by propagating the corresponding Franck–Condon
    factors. The calculated profiles of Auger spectral lines resemble those of atomic
    Auger decay but here the characteristic tails extend towards lower electron kinetic
    energies, which reflect specific features of the potential energy curves. The
    presented method can describe the resonant Auger spectrum for an arbitrary speed
    of dissociation and simplifies to known approximations in the limiting cases.
acknowledgement: This publication is based upon work from COST Action CA18212 – Molecular
  Dynamics in the GAS phase (MD-GAS), supported by COST (European Cooperation in Science
  and Technology). This work was financially supported by the Slovenian Research Agency
  in the framework of research program P1-0112 Studies of Atoms, Molecules and Structures
  by Photons and Particles. Part of this work was financed by the European Research
  Council (ERC) through the Starting Grant No. 801770 (ANGULON). The authors acknowledge
  P. Lablanquie, H. Iwayama, F. Penent, K. Soejima and E. Shigemasa for sharing their
  unpublished experimental spectra on HCl.
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Mateja
  full_name: Hrast, Mateja
  id: 48dbb294-2a9c-11ef-905d-f56be71f0e5d
  last_name: Hrast
- first_name: Marko
  full_name: Ljubotina, Marko
  id: F75EE9BE-5C90-11EA-905D-16643DDC885E
  last_name: Ljubotina
  orcid: 0000-0003-0038-7068
- first_name: Matjaz
  full_name: Zitnik, Matjaz
  last_name: Zitnik
citation:
  ama: Hrast M, Ljubotina M, Zitnik M. Ab initio Auger spectrum of the ultrafast dissociating
    2p3/2−1σ* resonance in HCl. <i>Physical Chemistry Chemical Physics</i>. 2025;27(3):1473-1482.
    doi:<a href="https://doi.org/10.1039/d4cp03727h">10.1039/d4cp03727h</a>
  apa: Hrast, M., Ljubotina, M., &#38; Zitnik, M. (2025). Ab initio Auger spectrum
    of the ultrafast dissociating 2p3/2−1σ* resonance in HCl. <i>Physical Chemistry
    Chemical Physics</i>. Royal Society of Chemistry. <a href="https://doi.org/10.1039/d4cp03727h">https://doi.org/10.1039/d4cp03727h</a>
  chicago: Hrast, Mateja, Marko Ljubotina, and Matjaz Zitnik. “Ab Initio Auger Spectrum
    of the Ultrafast Dissociating 2p3/2−1σ* Resonance in HCl.” <i>Physical Chemistry
    Chemical Physics</i>. Royal Society of Chemistry, 2025. <a href="https://doi.org/10.1039/d4cp03727h">https://doi.org/10.1039/d4cp03727h</a>.
  ieee: M. Hrast, M. Ljubotina, and M. Zitnik, “Ab initio Auger spectrum of the ultrafast
    dissociating 2p3/2−1σ* resonance in HCl,” <i>Physical Chemistry Chemical Physics</i>,
    vol. 27, no. 3. Royal Society of Chemistry, pp. 1473–1482, 2025.
  ista: Hrast M, Ljubotina M, Zitnik M. 2025. Ab initio Auger spectrum of the ultrafast
    dissociating 2p3/2−1σ* resonance in HCl. Physical Chemistry Chemical Physics.
    27(3), 1473–1482.
  mla: Hrast, Mateja, et al. “Ab Initio Auger Spectrum of the Ultrafast Dissociating
    2p3/2−1σ* Resonance in HCl.” <i>Physical Chemistry Chemical Physics</i>, vol.
    27, no. 3, Royal Society of Chemistry, 2025, pp. 1473–82, doi:<a href="https://doi.org/10.1039/d4cp03727h">10.1039/d4cp03727h</a>.
  short: M. Hrast, M. Ljubotina, M. Zitnik, Physical Chemistry Chemical Physics 27
    (2025) 1473–1482.
corr_author: '1'
das_tickbox: '1'
dataavailabilitystatement: Data for this article, including potential energy curves,
  Auger decay rates and spectral lines, are available at ZENODO at https://doi.org/10.5281/zenodo.13833475.
date_created: 2024-12-29T23:01:58Z
date_published: 2025-01-21T00:00:00Z
date_updated: 2026-10-21T07:56:55Z
day: '21'
ddc:
- '530'
department:
- _id: MiLe
- _id: MaSe
doi: 10.1039/d4cp03727h
ec_funded: 1
external_id:
  isi:
  - '001379819100001'
  pmid:
  - '39698879'
file:
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  checksum: d035683179547b41b811107a8649aab0
  content_type: application/pdf
  creator: dernst
  date_created: 2025-04-16T09:46:45Z
  date_updated: 2025-04-16T09:46:45Z
  file_id: '19581'
  file_name: 2025_PCCP_Hrast.pdf
  file_size: 1270582
  relation: main_file
  success: 1
file_date_updated: 2025-04-16T09:46:45Z
fulldoi: https://doi.org/10.1039/d4cp03727h
has_accepted_license: '1'
intvolume: '        27'
isi: 1
issue: '3'
language:
- iso: eng
license: https://creativecommons.org/licenses/by-nc/3.0/
month: '01'
oa: 1
oa_version: Published Version
page: 1473-1482
pmid: 1
project:
- _id: 2688CF98-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '801770'
  name: 'Angulon: physics and applications of a new quasiparticle'
publication: Physical Chemistry Chemical Physics
publication_identifier:
  issn:
  - 1463-9076
publication_status: published
publisher: Royal Society of Chemistry
quality_controlled: '1'
related_material:
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    relation: research_data
    status: public
  - id: '22866'
    relation: research_data
    status: public
researchdata_availability: yes
scopus_import: '1'
status: public
supplementarymaterial: no
title: Ab initio Auger spectrum of the ultrafast dissociating 2p3/2−1σ* resonance
  in HCl
tmp:
  image: /images/cc_by_nc.png
  legal_code_url: https://creativecommons.org/licenses/by-nc/3.0/legalcode
  name: Creative Commons Attribution-NonCommercial 3.0 Unported (CC BY-NC 3.0)
  short: CC BY-NC (3.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 27
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
_id: '17459'
abstract:
- lang: eng
  text: Atopic dermatitis (AD) is the most common chronic inflammatory skin disease
    worldwide. AD is a highly complex disease with different subtypes. Many elements
    of AD pathophysiology have been described, but if/how they interact with each
    other or which mechanisms are important in which patients is still unclear. Langerhans
    cells (LCs) are antigen-presenting cells (APCs) in the epidermis. Depending on
    the context, they can act either pro- or anti-inflammatory. Many different studies
    have investigated LCs in the context of AD and found them to be connected to all
    major mechanisms of AD pathophysiology. As APCs, LCs recruit other immune cells
    and shape the immune response, especially adaptive immunity via polarization of
    T cells. As sentinel cells, LCs are primary sensors of the skin microbiome and
    are important for the decision of immunity versus tolerance. LCs are also involved
    with the integrity of the skin barrier by influencing tight junctions. Finally,
    LCs are important cells in the neuro-immune crosstalk in the skin. In this review,
    we provide an overview about the many different roles of LCs in AD. Understanding
    LCs might bring us closer to a more complete understanding of this highly complex
    disease. Potentially, modulating LCs might offer new options for targeted therapies
    for AD patients.
acknowledgement: This work was supported by the CK-CARE of the KühneFoundation, Switzerland;
  the China Scholarship Counciland Shanghai Biocelline Enterprise Co. Ltd, China.
article_processing_charge: Yes (in subscription journal)
article_type: original
author:
- first_name: Yi
  full_name: Pan, Yi
  last_name: Pan
- first_name: Mathias
  full_name: Hochgerner, Mathias
  last_name: Hochgerner
- first_name: Malgorzata Anna
  full_name: Cichon, Malgorzata Anna
  id: d63197a3-c188-11ed-9387-8d33a3f13871
  last_name: Cichon
- first_name: Theresa
  full_name: Benezeder, Theresa
  last_name: Benezeder
- first_name: Thomas
  full_name: Bieber, Thomas
  last_name: Bieber
- first_name: Peter
  full_name: Wolf, Peter
  last_name: Wolf
citation:
  ama: 'Pan Y, Hochgerner M, Cichon MA, Benezeder T, Bieber T, Wolf P. Langerhans
    cells: Central players in the pathophysiology of atopic dermatitis. <i>Journal
    of the European Academy of Dermatology and Venereology</i>. 2025;39(2):278-289.
    doi:<a href="https://doi.org/10.1111/jdv.20291">10.1111/jdv.20291</a>'
  apa: 'Pan, Y., Hochgerner, M., Cichon, M. A., Benezeder, T., Bieber, T., &#38; Wolf,
    P. (2025). Langerhans cells: Central players in the pathophysiology of atopic
    dermatitis. <i>Journal of the European Academy of Dermatology and Venereology</i>.
    Wiley. <a href="https://doi.org/10.1111/jdv.20291">https://doi.org/10.1111/jdv.20291</a>'
  chicago: 'Pan, Yi, Mathias Hochgerner, Malgorzata Anna Cichon, Theresa Benezeder,
    Thomas Bieber, and Peter Wolf. “Langerhans Cells: Central Players in the Pathophysiology
    of Atopic Dermatitis.” <i>Journal of the European Academy of Dermatology and Venereology</i>.
    Wiley, 2025. <a href="https://doi.org/10.1111/jdv.20291">https://doi.org/10.1111/jdv.20291</a>.'
  ieee: 'Y. Pan, M. Hochgerner, M. A. Cichon, T. Benezeder, T. Bieber, and P. Wolf,
    “Langerhans cells: Central players in the pathophysiology of atopic dermatitis,”
    <i>Journal of the European Academy of Dermatology and Venereology</i>, vol. 39,
    no. 2. Wiley, pp. 278–289, 2025.'
  ista: 'Pan Y, Hochgerner M, Cichon MA, Benezeder T, Bieber T, Wolf P. 2025. Langerhans
    cells: Central players in the pathophysiology of atopic dermatitis. Journal of
    the European Academy of Dermatology and Venereology. 39(2), 278–289.'
  mla: 'Pan, Yi, et al. “Langerhans Cells: Central Players in the Pathophysiology
    of Atopic Dermatitis.” <i>Journal of the European Academy of Dermatology and Venereology</i>,
    vol. 39, no. 2, Wiley, 2025, pp. 278–89, doi:<a href="https://doi.org/10.1111/jdv.20291">10.1111/jdv.20291</a>.'
  short: Y. Pan, M. Hochgerner, M.A. Cichon, T. Benezeder, T. Bieber, P. Wolf, Journal
    of the European Academy of Dermatology and Venereology 39 (2025) 278–289.
das_tickbox: '1'
dataavailabilitystatement: Data sharing not applicable to this article as no data
  sets were generated or analysed during the review.
date_created: 2024-08-25T22:01:07Z
date_published: 2025-02-01T00:00:00Z
date_updated: 2026-10-21T07:59:34Z
day: '01'
ddc:
- '570'
department:
- _id: MiSi
doi: 10.1111/jdv.20291
external_id:
  isi:
  - '001292894900001'
  pmid:
  - '39157943'
file:
- access_level: open_access
  checksum: 12555ddb3490daf10b8d44e334e7312e
  content_type: application/pdf
  creator: dernst
  date_created: 2025-04-16T09:59:37Z
  date_updated: 2025-04-16T09:59:37Z
  file_id: '19583'
  file_name: 2025_JEADV_Pan.pdf
  file_size: 457698
  relation: main_file
  success: 1
file_date_updated: 2025-04-16T09:59:37Z
fulldoi: https://doi.org/10.1111/jdv.20291
has_accepted_license: '1'
intvolume: '        39'
isi: 1
issue: '2'
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
page: 278-289
pmid: 1
publication: Journal of the European Academy of Dermatology and Venereology
publication_identifier:
  eissn:
  - 1468-3083
  issn:
  - 0926-9959
publication_status: published
publisher: Wiley
quality_controlled: '1'
researchdata_availability: not applicable
scopus_import: '1'
status: public
supplementarymaterial: no
title: 'Langerhans cells: Central players in the pathophysiology of atopic dermatitis'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 39
year: '2025'
...
---
OA_place: repository
OA_type: green
_id: '15121'
abstract:
- lang: eng
  text: We present an auction algorithm using multiplicative instead of constant weight
    updates to compute a (1-E)-approximate maximum weight matching (MWM) in a bipartite
    graph with n vertices and m edges in time 0(mE-1), beating the running time of
    the fastest known approximation algorithm of Duan and Pettie [JACM ’14] that runs
    in 0(mE-1 log E-1). Our algorithm is very simple and it can be extended to give
    a dynamic data structure that maintains a (1-E)-approximate maximum weight matching
    under (1) one-sided vertex deletions (with incident edges) and (2) one-sided vertex
    insertions (with incident edges sorted by weight) to the other side. The total
    time time used is 0(mE-1), where m is the sum of the number of initially existing
    and inserted edges.
acknowledgement: The first author thanks Chandra Chekuri for useful discussions about
  this paper. This work was done in part at the University of Vienna. This project
  has received funding from the European Research Council (ERC) under the European
  Union’s Horizon 2020 research and innovation programme (Grant agreement No. 101019564
  “The Design of Modern Fully Dynamic Data Structures (MoDynStruct)” and from the
  Austrian Science Fund (FWF) project “Fast Algorithms for a Reactive Network Layer
  (ReactNet)”, P 33775-N, with additional funding from the netidee SCIENCE Stiftung,
  2020–2024.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Da Wei
  full_name: Zheng, Da Wei
  last_name: Zheng
- first_name: Monika H
  full_name: Henzinger, Monika H
  id: 540c9bbd-f2de-11ec-812d-d04a5be85630
  last_name: Henzinger
  orcid: 0000-0002-5008-6530
citation:
  ama: Zheng DW, Henzinger M. Multiplicative auction algorithm for approximate maximum
    weight bipartite matching. <i>Mathematical Programming</i>. 2025;210:881-894.
    doi:<a href="https://doi.org/10.1007/s10107-024-02066-3">10.1007/s10107-024-02066-3</a>
  apa: Zheng, D. W., &#38; Henzinger, M. (2025). Multiplicative auction algorithm
    for approximate maximum weight bipartite matching. <i>Mathematical Programming</i>.
    Springer Nature. <a href="https://doi.org/10.1007/s10107-024-02066-3">https://doi.org/10.1007/s10107-024-02066-3</a>
  chicago: Zheng, Da Wei, and Monika Henzinger. “Multiplicative Auction Algorithm
    for Approximate Maximum Weight Bipartite Matching.” <i>Mathematical Programming</i>.
    Springer Nature, 2025. <a href="https://doi.org/10.1007/s10107-024-02066-3">https://doi.org/10.1007/s10107-024-02066-3</a>.
  ieee: D. W. Zheng and M. Henzinger, “Multiplicative auction algorithm for approximate
    maximum weight bipartite matching,” <i>Mathematical Programming</i>, vol. 210.
    Springer Nature, pp. 881–894, 2025.
  ista: Zheng DW, Henzinger M. 2025. Multiplicative auction algorithm for approximate
    maximum weight bipartite matching. Mathematical Programming. 210, 881–894.
  mla: Zheng, Da Wei, and Monika Henzinger. “Multiplicative Auction Algorithm for
    Approximate Maximum Weight Bipartite Matching.” <i>Mathematical Programming</i>,
    vol. 210, Springer Nature, 2025, pp. 881–94, doi:<a href="https://doi.org/10.1007/s10107-024-02066-3">10.1007/s10107-024-02066-3</a>.
  short: D.W. Zheng, M. Henzinger, Mathematical Programming 210 (2025) 881–894.
corr_author: '1'
das_tickbox: '0'
date_created: 2024-03-17T23:00:58Z
date_published: 2025-03-01T00:00:00Z
date_updated: 2026-10-21T08:03:01Z
day: '01'
department:
- _id: MoHe
doi: 10.1007/s10107-024-02066-3
ec_funded: 1
external_id:
  arxiv:
  - '2301.09217'
  isi:
  - '001176048100003'
fulldoi: https://doi.org/10.1007/s10107-024-02066-3
intvolume: '       210'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2301.09217
month: '03'
oa: 1
oa_version: Preprint
page: 881-894
project:
- _id: bd9ca328-d553-11ed-ba76-dc4f890cfe62
  call_identifier: H2020
  grant_number: '101019564'
  name: The design and evaluation of modern fully dynamic data structures
- _id: bd9e3a2e-d553-11ed-ba76-8aa684ce17fe
  grant_number: P33775
  name: Fast Algorithms for a Reactive Network Layer
publication: Mathematical Programming
publication_identifier:
  eissn:
  - 1436-4646
  issn:
  - 0025-5610
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
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supplementarymaterial: no
title: Multiplicative auction algorithm for approximate maximum weight bipartite matching
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 210
year: '2025'
...
---
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abstract:
- lang: eng
  text: Voltage-gated CaV2.1 (P/Q-type) Ca2+ channels play a crucial role in regulating
    neurotransmitter release, thus contributing to synaptic plasticity and to processes
    such as learning and memory. Despite their recognized importance in neural function,
    there is limited information on their potential involvement in neurodegenerative
    conditions such as Alzheimer's disease (AD). Here, we aimed to explore the impact
    of AD pathology on the density and nanoscale compartmentalization of CaV2.1 channels
    in the hippocampus in association with GABAB receptors. Histoblotting experiments
    showed that the density of CaV2.1 channel was significantly reduced in the hippocampus
    of APP/PS1 mice in a laminar-dependent manner. CaV2.1 channel was enriched in
    the active zone of the axon terminals and was present at a very low density over
    the surface of dendritic tree of the CA1 pyramidal cells, as shown by quantitative
    SDS-digested freeze-fracture replica labelling (SDS-FRL). In APP/PS1 mice, the
    density of CaV2.1 channel in the active zone was significantly reduced in the
    strata radiatum and lacunosum-moleculare, while it remained unaltered in the stratum
    oriens. The decline in Cav2.1 channel density was found to be associated with
    a corresponding impairment in the GABAergic synaptic function, as evidenced by
    electrophysiological experiments carried out in the hippocampus of APP/PS1 mice.
    Remarkably, double SDS-FRL showed a co-clustering of CaV2.1 channel and GABAB1
    receptor in nanodomains (~40–50 nm) in wild type mice, while in APP/PS1 mice this
    nanoarchitecture was absent. Together, these findings suggest that the AD pathology-induced
    reduction in CaV2.1 channel density and CaV2.1-GABAB1 de-clustering may play a
    role in the synaptic transmission alterations shown in the AD hippocampus. Therefore,
    uncovering these layer-dependent changes in P/Q calcium currents associated with
    AD pathology can benefit the development of future strategies for AD management.
acknowledgement: "Funding sources were Spanish Ministerio de Economía y Competitividad,
  Junta de Comunidades de Castilla-La Mancha (Spain), Life Science Innovation Center
  at University of Fukui and German Research Foundation.\r\nGrants RTI2018-095812-B-I00
  and PID2021-125875OB-I00 funded by MCIN/AEI/10.13039/501100011033 and by “ERDF A
  way of making Europe” to Rafael Luján. This study was also supported by a grant
  from Junta de Comunidades de Castilla-La Mancha (SBPLY/17/180501/000229 and SBPLY/21/180501/000064)
  and Universidad de Castilla-La Mancha (2023-GRIN-34187) to Rafael Luján, and Life
  Science Innovation Center (Research and Education Program for Life Science) at University
  of Fukui and JSPS KAKENHI Grant Numbers 16H04662, 17K19446, 18H05120 to Yugo Fukazawa
  and Margarita Salas fellowship from Ministerio de Universidades and Universidad
  de Castilla-La Mancha to Alejandro Martín-Belmonte. German Research Foundation (DFG
  FOR 2143) and BIOSS-2 to Akos Kulik."
article_number: e13279
article_processing_charge: Yes
article_type: original
author:
- first_name: Alejandro
  full_name: Martín‐Belmonte, Alejandro
  last_name: Martín‐Belmonte
- first_name: Carolina
  full_name: Aguado, Carolina
  last_name: Aguado
- first_name: Rocío
  full_name: Alfaro‐Ruiz, Rocío
  last_name: Alfaro‐Ruiz
- first_name: Akos
  full_name: Kulik, Akos
  last_name: Kulik
- first_name: Luis
  full_name: de la Ossa, Luis
  last_name: de la Ossa
- first_name: Ana Esther
  full_name: Moreno‐Martínez, Ana Esther
  last_name: Moreno‐Martínez
- first_name: Samuel
  full_name: Alberquilla, Samuel
  last_name: Alberquilla
- first_name: Lucía
  full_name: García‐Carracedo, Lucía
  last_name: García‐Carracedo
- first_name: Miriam
  full_name: Fernández, Miriam
  last_name: Fernández
- first_name: Ana
  full_name: Fajardo‐Serrano, Ana
  last_name: Fajardo‐Serrano
- first_name: Ester
  full_name: Aso, Ester
  last_name: Aso
- first_name: Ryuichi
  full_name: Shigemoto, Ryuichi
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: Eduardo D.
  full_name: Martín, Eduardo D.
  last_name: Martín
- first_name: Yugo
  full_name: Fukazawa, Yugo
  last_name: Fukazawa
- first_name: Francisco
  full_name: Ciruela, Francisco
  last_name: Ciruela
- first_name: Rafael
  full_name: Luján, Rafael
  last_name: Luján
citation:
  ama: 'Martín‐Belmonte A, Aguado C, Alfaro‐Ruiz R, et al. Nanoarchitecture of CaV&#62;2.1
    channels and GABAB receptors in the mouse hippocampus: Impact of APP/PS1 pathology.
    <i>Brain Pathology</i>. 2025;35(2). doi:<a href="https://doi.org/10.1111/bpa.13279">10.1111/bpa.13279</a>'
  apa: 'Martín‐Belmonte, A., Aguado, C., Alfaro‐Ruiz, R., Kulik, A., de la Ossa, L.,
    Moreno‐Martínez, A. E., … Luján, R. (2025). Nanoarchitecture of CaV&#62;2.1 channels
    and GABAB receptors in the mouse hippocampus: Impact of APP/PS1 pathology. <i>Brain
    Pathology</i>. Wiley. <a href="https://doi.org/10.1111/bpa.13279">https://doi.org/10.1111/bpa.13279</a>'
  chicago: 'Martín‐Belmonte, Alejandro, Carolina Aguado, Rocío Alfaro‐Ruiz, Akos Kulik,
    Luis de la Ossa, Ana Esther Moreno‐Martínez, Samuel Alberquilla, et al. “Nanoarchitecture
    of CaV&#62;2.1 Channels and GABAB Receptors in the Mouse Hippocampus: Impact of
    APP/PS1 Pathology.” <i>Brain Pathology</i>. Wiley, 2025. <a href="https://doi.org/10.1111/bpa.13279">https://doi.org/10.1111/bpa.13279</a>.'
  ieee: 'A. Martín‐Belmonte <i>et al.</i>, “Nanoarchitecture of CaV&#62;2.1 channels
    and GABAB receptors in the mouse hippocampus: Impact of APP/PS1 pathology,” <i>Brain
    Pathology</i>, vol. 35, no. 2. Wiley, 2025.'
  ista: 'Martín‐Belmonte A, Aguado C, Alfaro‐Ruiz R, Kulik A, de la Ossa L, Moreno‐Martínez
    AE, Alberquilla S, García‐Carracedo L, Fernández M, Fajardo‐Serrano A, Aso E,
    Shigemoto R, Martín ED, Fukazawa Y, Ciruela F, Luján R. 2025. Nanoarchitecture
    of CaV&#62;2.1 channels and GABAB receptors in the mouse hippocampus: Impact of
    APP/PS1 pathology. Brain Pathology. 35(2), e13279.'
  mla: 'Martín‐Belmonte, Alejandro, et al. “Nanoarchitecture of CaV&#62;2.1 Channels
    and GABAB Receptors in the Mouse Hippocampus: Impact of APP/PS1 Pathology.” <i>Brain
    Pathology</i>, vol. 35, no. 2, e13279, Wiley, 2025, doi:<a href="https://doi.org/10.1111/bpa.13279">10.1111/bpa.13279</a>.'
  short: A. Martín‐Belmonte, C. Aguado, R. Alfaro‐Ruiz, A. Kulik, L. de la Ossa, A.E.
    Moreno‐Martínez, S. Alberquilla, L. García‐Carracedo, M. Fernández, A. Fajardo‐Serrano,
    E. Aso, R. Shigemoto, E.D. Martín, Y. Fukazawa, F. Ciruela, R. Luján, Brain Pathology
    35 (2025).
das_tickbox: '1'
dataavailabilitystatement: All data used and/or analyzed during the current study
  are available from the corresponding author on reasonable request.
date_created: 2024-07-22T07:48:20Z
date_published: 2025-03-01T00:00:00Z
date_updated: 2026-10-21T08:30:00Z
day: '01'
ddc:
- '570'
department:
- _id: RySh
doi: 10.1111/bpa.13279
external_id:
  isi:
  - '001250034200001'
  pmid:
  - '38887180'
file:
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pmid: 1
publication: Brain Pathology
publication_identifier:
  eissn:
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  issn:
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publication_status: published
publisher: Wiley
quality_controlled: '1'
researchdata_availability: upon request
scopus_import: '1'
status: public
supplementarymaterial: yes
title: 'Nanoarchitecture of CaV>2.1 channels and GABAB receptors in the mouse hippocampus:
  Impact of APP/PS1 pathology'
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type: journal_article
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OA_place: publisher
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_id: '17240'
abstract:
- lang: eng
  text: We prove an upper bound on the energy density of the dilute spin-\(\frac {1}{2}\)
    Fermi gas capturing the leading correction to the kinetic energy\(8\pi a\rho _\uparrow\rho
    _\downarrow\) with an error of size smaller than\(a\rho^{2}(a^ 3\rho)^{1/3-\varepsilon}\)
    for any\(\varepsilon> 0\), where a denotes the scattering length of the interaction.
    The result is valid for a large class of interactions including interactions with
    a hard core. A central ingredient in the proof is a rigorous version of a fermionic
    cluster expansion adapted from the formal expansion of Gaudin et al. (Nucl Phys
    A 176(2):237–260, 1971. https://doi.org/10.1016/0375-9474(71)90267-3).
acknowledgement: "Open access funding provided by Institute of Science and Technology
  (IST Austria).\r\nWe thank Alessandro Giuliani and Robert Seiringer for helpful
  discussions and Robert Seiringer for his comments on the manuscript. Financial support
  by the Austrian Science Fund (FWF) through Grant https://doi.org/10.55776/I6427
  (as part of the SFB/TRR 352) is gratefully acknowledged."
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Asbjørn Bækgaard
  full_name: Lauritsen, Asbjørn Bækgaard
  id: e1a2682f-dc8d-11ea-abe3-81da9ac728f1
  last_name: Lauritsen
  orcid: 0000-0003-4476-2288
citation:
  ama: Lauritsen AB. Almost optimal upper bound for the ground state energy of a dilute
    Fermi gas via cluster expansion. <i>Annales Henri Poincare</i>. 2025;26:203-243.
    doi:<a href="https://doi.org/10.1007/s00023-024-01450-1">10.1007/s00023-024-01450-1</a>
  apa: Lauritsen, A. B. (2025). Almost optimal upper bound for the ground state energy
    of a dilute Fermi gas via cluster expansion. <i>Annales Henri Poincare</i>. Springer
    Nature. <a href="https://doi.org/10.1007/s00023-024-01450-1">https://doi.org/10.1007/s00023-024-01450-1</a>
  chicago: Lauritsen, Asbjørn Bækgaard. “Almost Optimal Upper Bound for the Ground
    State Energy of a Dilute Fermi Gas via Cluster Expansion.” <i>Annales Henri Poincare</i>.
    Springer Nature, 2025. <a href="https://doi.org/10.1007/s00023-024-01450-1">https://doi.org/10.1007/s00023-024-01450-1</a>.
  ieee: A. B. Lauritsen, “Almost optimal upper bound for the ground state energy of
    a dilute Fermi gas via cluster expansion,” <i>Annales Henri Poincare</i>, vol.
    26. Springer Nature, pp. 203–243, 2025.
  ista: Lauritsen AB. 2025. Almost optimal upper bound for the ground state energy
    of a dilute Fermi gas via cluster expansion. Annales Henri Poincare. 26, 203–243.
  mla: Lauritsen, Asbjørn Bækgaard. “Almost Optimal Upper Bound for the Ground State
    Energy of a Dilute Fermi Gas via Cluster Expansion.” <i>Annales Henri Poincare</i>,
    vol. 26, Springer Nature, 2025, pp. 203–43, doi:<a href="https://doi.org/10.1007/s00023-024-01450-1">10.1007/s00023-024-01450-1</a>.
  short: A.B. Lauritsen, Annales Henri Poincare 26 (2025) 203–243.
corr_author: '1'
das_tickbox: '0'
date_created: 2024-07-14T22:01:12Z
date_published: 2025-01-01T00:00:00Z
date_updated: 2026-10-21T08:28:52Z
day: '01'
ddc:
- '510'
department:
- _id: RoSe
doi: 10.1007/s00023-024-01450-1
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project:
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  grant_number: I06427
  name: Mathematical Challenges in BCS Theory of Superconductivity
publication: Annales Henri Poincare
publication_identifier:
  issn:
  - 1424-0637
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
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supplementarymaterial: no
title: Almost optimal upper bound for the ground state energy of a dilute Fermi gas
  via cluster expansion
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
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  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 26
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...
---
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_id: '20203'
abstract:
- lang: eng
  text: Tribocharging, or contact electrification, is the phenomenon in which two
    initially neutral materials exchange electric charge through contact and subsequent
    separation. While it is widely observed in everyday life and crucial to numerous
    natural processes, even the most basic aspects of tribocharging are still a mystery—what
    are the charge carriers involved and what drives their exchange? This work spans
    three separate projects that address different aspects of tribocharging. First,
    we introduce a novel strategy combining Finite Element Method (FEM) simulations
    with Kelvin Probe Force Microscopy (KPFM) to quantitatively extract surface charge
    density from surface voltage maps. Second, we present a simple theoretical model
    that allows for the existence of triboelectric cycles, under the assumption that
    multiple charge carrying species are involved. Third, we present experimental
    evidence that identical materials can spontaneously evolve into a triboelectric
    series, driven by contact history. Modeling this behavior enables the replication
    of experimental results with simulations, and even experimentally forcing the
    appearance of a pre-designed series by manipulating contact history. Together,
    the findings from these projects challenge traditional views on tribocharging,
    provide new tools for probing it, and open up new avenues of research—all with
    the hopes of bringing us closer to understanding this puzzling phenomenon.
acknowledged_ssus:
- _id: M-Shop
- _id: NanoFab
- _id: EM-Fac
- _id: LifeSc
- _id: ScienComp
acknowledgement: "The project in Chapter 2 has received funding from the European
  Research Council (ERC) under\r\nthe European Union’s Horizon 2020 research and innovation
  programme (Grant Agreement\r\nNo. 949120).\r\nThe project in Chapter 3 has received
  funding from the European Research Council (ERC) under\r\nthe European Union’s Horizon
  2020 research and innovation programme (Grant Agreement\r\nNo. 949120).\r\nThe project
  in Chapter 4 has received financing from the European Research Council grant\r\nagreement
  No. 949120 under the European Union’s Horizon 2020 research and innovation\r\nprogramme.
  The Analytical Instrumentation Center of the TU Wien acknowledges support by\r\nthe
  FFG project ‘ELSA’ under grant no. 884672. C.M.P. and M.O. acknowledge the state\r\nof
  Lower Austria and the European Regional Development Fund under grant no. WST3-F542638/004-2021.\r\n"
alternative_title:
- ISTA Thesis
article_processing_charge: No
author:
- first_name: Juan Carlos A
  full_name: Sobarzo Ponce, Juan Carlos A
  id: 4B807D68-AE37-11E9-AC72-31CAE5697425
  last_name: Sobarzo Ponce
citation:
  ama: 'Sobarzo Ponce JCA. Tribocharging of identical insulators: Triboelectric series,
    triboelectric cycles and surface charges. 2025. doi:<a href="https://doi.org/10.15479/AT-ISTA-20203">10.15479/AT-ISTA-20203</a>'
  apa: 'Sobarzo Ponce, J. C. A. (2025). <i>Tribocharging of identical insulators:
    Triboelectric series, triboelectric cycles and surface charges</i>. Institute
    of Science and Technology Austria. <a href="https://doi.org/10.15479/AT-ISTA-20203">https://doi.org/10.15479/AT-ISTA-20203</a>'
  chicago: 'Sobarzo Ponce, Juan Carlos A. “Tribocharging of Identical Insulators:
    Triboelectric Series, Triboelectric Cycles and Surface Charges.” Institute of
    Science and Technology Austria, 2025. <a href="https://doi.org/10.15479/AT-ISTA-20203">https://doi.org/10.15479/AT-ISTA-20203</a>.'
  ieee: 'J. C. A. Sobarzo Ponce, “Tribocharging of identical insulators: Triboelectric
    series, triboelectric cycles and surface charges,” Institute of Science and Technology
    Austria, 2025.'
  ista: 'Sobarzo Ponce JCA. 2025. Tribocharging of identical insulators: Triboelectric
    series, triboelectric cycles and surface charges. Institute of Science and Technology
    Austria.'
  mla: 'Sobarzo Ponce, Juan Carlos A. <i>Tribocharging of Identical Insulators: Triboelectric
    Series, Triboelectric Cycles and Surface Charges</i>. Institute of Science and
    Technology Austria, 2025, doi:<a href="https://doi.org/10.15479/AT-ISTA-20203">10.15479/AT-ISTA-20203</a>.'
  short: 'J.C.A. Sobarzo Ponce, Tribocharging of Identical Insulators: Triboelectric
    Series, Triboelectric Cycles and Surface Charges, Institute of Science and Technology
    Austria, 2025.'
corr_author: '1'
date_created: 2025-08-21T11:42:59Z
date_published: 2025-08-27T00:00:00Z
date_updated: 2026-10-21T08:38:30Z
day: '27'
ddc:
- '530'
degree_awarded: PhD
department:
- _id: GradSch
- _id: ScWa
doi: 10.15479/AT-ISTA-20203
doi_confirm: '1'
ec_funded: 1
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language:
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month: '08'
oa: 1
oa_version: Published Version
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project:
- _id: 0aa60e99-070f-11eb-9043-a6de6bdc3afa
  call_identifier: H2020
  grant_number: '949120'
  name: 'Tribocharge: a multi-scale approach to an enduring problem in physics'
publication_identifier:
  isbn:
  - 978-3-99078-062-6
  issn:
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publication_status: published
publisher: Institute of Science and Technology Austria
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supervisor:
- first_name: Scott R
  full_name: Waitukaitis, Scott R
  id: 3A1FFC16-F248-11E8-B48F-1D18A9856A87
  last_name: Waitukaitis
  orcid: 0000-0002-2299-3176
title: 'Tribocharging of identical insulators: Triboelectric series, triboelectric
  cycles and surface charges'
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type: dissertation
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
year: '2025'
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---
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- _id: SSU
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acknowledgement: "I gratefully acknowledge the support of the ISTA Graduate School
  and the Scientific Service Units of\r\nISTA, whose resources made this work possible—especially
  the Imaging & Optics Facility, the Lab\r\nSupport Facility, and the Miba Machine
  Shop. I would like to thank two staff scientists in particular:\r\nRobert Hauschild
  (Imaging & Optics Facility) and Daniel Balazs (Lab Support Facility), for their\r\nassistance
  and advice. My PhD was partially funded by the Austrian Science Fund (FWF)\r\n(10.55776/P37169
  and 10.55776/COE5)."
alternative_title:
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citation:
  ama: 'Mondal S. Oxygen and sulfur redox: Conversion kinetics and phase equilibria.
    2025. doi:<a href="https://doi.org/10.15479/AT-ISTA-20607">10.15479/AT-ISTA-20607</a>'
  apa: 'Mondal, S. (2025). <i>Oxygen and sulfur redox: Conversion kinetics and phase
    equilibria</i>. Institute of Science and Technology Austria. <a href="https://doi.org/10.15479/AT-ISTA-20607">https://doi.org/10.15479/AT-ISTA-20607</a>'
  chicago: 'Mondal, Soumyadip. “Oxygen and Sulfur Redox: Conversion Kinetics and Phase
    Equilibria.” Institute of Science and Technology Austria, 2025. <a href="https://doi.org/10.15479/AT-ISTA-20607">https://doi.org/10.15479/AT-ISTA-20607</a>.'
  ieee: 'S. Mondal, “Oxygen and sulfur redox: Conversion kinetics and phase equilibria,”
    Institute of Science and Technology Austria, 2025.'
  ista: 'Mondal S. 2025. Oxygen and sulfur redox: Conversion kinetics and phase equilibria.
    Institute of Science and Technology Austria.'
  mla: 'Mondal, Soumyadip. <i>Oxygen and Sulfur Redox: Conversion Kinetics and Phase
    Equilibria</i>. Institute of Science and Technology Austria, 2025, doi:<a href="https://doi.org/10.15479/AT-ISTA-20607">10.15479/AT-ISTA-20607</a>.'
  short: 'S. Mondal, Oxygen and Sulfur Redox: Conversion Kinetics and Phase Equilibria,
    Institute of Science and Technology Austria, 2025.'
corr_author: '1'
das_tickbox: '1'
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title: 'Oxygen and sulfur redox: Conversion kinetics and phase equilibria'
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...
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  text: Sick individuals often conceal their disease status to group members, thereby
    preventing social exclusion or aggression. Here we show by behavioural, chemical,
    immunological and infection load analyses that sick ant pupae instead actively
    emit a chemical signal that in itself is sufficient to trigger their own destruction
    by colony members. In our experiments, this altruistic disease-signalling was
    performed only by worker but not queen pupae. The lack of signalling by queen
    pupae did not constitute cheating behaviour, but reflected their superior immune
    capabilities. Worker pupae suffered from extensive pathogen replication whereas
    queen pupae were able to restrain their infection. Our data suggest the evolution
    of a finely-tuned signalling system in which it is not the induction of an individual’s
    immune response, but rather its failure to overcome the infection, that triggers
    pupal signalling for sacrifice. This demonstrates a balanced interplay between
    individual and social immunity that efficiently achieves whole-colony health.
acknowledged_ssus:
- _id: LifeSc
- _id: MassSpec
acknowledgement: We thank Joergen Eilenberg and Nicolai V. Meyling for the fungal
  strain, and the ISTA Social Immunity team, Jonghyun Park and Yuko Ulrich for ant
  collection. We also thank the Social Immunity team, in particular David Moreno Martínez,
  Tanvi Madaan, Wilfrid Jean Louis and Jessica Kirchner, for experimental and molecular
  support, as well as Friedrich Fochler for technical support with the chemical analysis,
  and the ISTA Lab Support Facility, including the mass spectrometry unit, for general
  and chemical laboratory support. We further thank Marco Ribezzi for advice on 13C
  calculations and Ernst Pittenauer for discussion of the chemical data, Chris Pull
  and Michael Sixt for project discussion, and the Social Immunity team for comments
  on the manuscript. The study was funded by the European Research Council (ERC) under
  the European Union’s Horizon 2020 research and innovation Programme (No. 771402;
  EPIDEMICSonCHIP) to SC.
article_number: '10511'
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  full_name: Dawson, Erika
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  last_name: Dawson
- first_name: Michaela
  full_name: Hönigsberger, Michaela
  id: 953894f3-25bd-11ec-8556-f70a9d38ef60
  last_name: Hönigsberger
- first_name: Niklas
  full_name: Kampleitner, Niklas
  id: 2AC57FAC-F248-11E8-B48F-1D18A9856A87
  last_name: Kampleitner
- first_name: Anna V
  full_name: Grasse, Anna V
  id: 406F989C-F248-11E8-B48F-1D18A9856A87
  last_name: Grasse
- first_name: Lukas
  full_name: Lindorfer, Lukas
  id: 85f0e6d3-06b3-11ec-8982-8c5049fa4455
  last_name: Lindorfer
- first_name: Jennifer
  full_name: Robb, Jennifer
  id: 7bc2734a-e2c6-11ea-9824-a2ed5f0662a8
  last_name: Robb
- first_name: Farnaz
  full_name: Beikzadeh Abbasi, Farnaz
  id: 0344bfb9-3feb-11ee-87e9-c27edc800bcd
  last_name: Beikzadeh Abbasi
- first_name: Florian
  full_name: Strahodinsky, Florian
  id: 979E35EE-C996-11E9-8C7C-CF13E6697425
  last_name: Strahodinsky
- first_name: Hanna
  full_name: Leitner, Hanna
  id: 8fc5c6f6-5903-11ec-abad-c83f046253e7
  last_name: Leitner
- first_name: Harikrishnan
  full_name: Rajendran, Harikrishnan
  id: 876b6b34-8ff4-11ec-97c9-8d95a7aae416
  last_name: Rajendran
- first_name: Thomas
  full_name: Schmitt, Thomas
  last_name: Schmitt
- first_name: Sylvia
  full_name: Cremer, Sylvia
  id: 2F64EC8C-F248-11E8-B48F-1D18A9856A87
  last_name: Cremer
  orcid: 0000-0002-2193-3868
citation:
  ama: Dawson E, Hönigsberger M, Kampleitner N, et al. Altruistic disease signalling
    in ant colonies. <i>Nature Communications</i>. 2025;16. doi:<a href="https://doi.org/10.1038/s41467-025-66175-z">10.1038/s41467-025-66175-z</a>
  apa: Dawson, E., Hönigsberger, M., Kampleitner, N., Grasse, A. V., Lindorfer, L.,
    Robb, J., … Cremer, S. (2025). Altruistic disease signalling in ant colonies.
    <i>Nature Communications</i>. Springer Nature. <a href="https://doi.org/10.1038/s41467-025-66175-z">https://doi.org/10.1038/s41467-025-66175-z</a>
  chicago: Dawson, Erika, Michaela Hönigsberger, Niklas Kampleitner, Anna V Grasse,
    Lukas Lindorfer, Jennifer Robb, Farnaz Beikzadeh, et al. “Altruistic Disease Signalling
    in Ant Colonies.” <i>Nature Communications</i>. Springer Nature, 2025. <a href="https://doi.org/10.1038/s41467-025-66175-z">https://doi.org/10.1038/s41467-025-66175-z</a>.
  ieee: E. Dawson <i>et al.</i>, “Altruistic disease signalling in ant colonies,”
    <i>Nature Communications</i>, vol. 16. Springer Nature, 2025.
  ista: Dawson E, Hönigsberger M, Kampleitner N, Grasse AV, Lindorfer L, Robb J, Beikzadeh
    F, Strahodinsky F, Leitner H, Rajendran H, Schmitt T, Cremer S. 2025. Altruistic
    disease signalling in ant colonies. Nature Communications. 16, 10511.
  mla: Dawson, Erika, et al. “Altruistic Disease Signalling in Ant Colonies.” <i>Nature
    Communications</i>, vol. 16, 10511, Springer Nature, 2025, doi:<a href="https://doi.org/10.1038/s41467-025-66175-z">10.1038/s41467-025-66175-z</a>.
  short: E. Dawson, M. Hönigsberger, N. Kampleitner, A.V. Grasse, L. Lindorfer, J.
    Robb, F. Beikzadeh, F. Strahodinsky, H. Leitner, H. Rajendran, T. Schmitt, S.
    Cremer, Nature Communications 16 (2025).
corr_author: '1'
das_tickbox: '0'
date_created: 2025-01-27T11:28:05Z
date_published: 2025-12-01T00:00:00Z
date_updated: 2026-10-21T10:53:39Z
day: '01'
ddc:
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title: Altruistic disease signalling in ant colonies
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...
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abstract:
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  text: 'Sick individuals often conceal their disease status to group members, thereby
    preventing social exclusion or aggression. Here we show by behavioural, chemical,
    immunological and infection load analyses that sick ant pupae instead actively
    emit a chemical signal that in itself is sufficient to trigger their own destruction
    by colony members. In our experiments, this altruistic disease-signalling was
    performed only by worker but not queen pupae. The lack of signalling by queen
    pupae did not constitute cheating behaviour, but reflected their superior immune
    capabilities. Worker pupae suffered from extensive pathogen replication whereas
    queen pupae were able to restrain their infection. Our data suggest the evolution
    of a finely-tuned signalling system in which it is not the induction of an individual’s
    immune response, but rather its failure to overcome the infection, that triggers
    pupal signalling for sacrifice. This demonstrates a balanced interplay between
    individual and social immunity that efficiently achieves whole-colony health. '
acknowledgement: 'We thank Joergen Eilenberg and Nicolai V. Meyling for the fungal
  strain, and the ISTA Social Immunity team, Jonghyun Park and Yuko Ulrich for ant
  collection. We also thank the Social Immunity team, in particular David Moreno Martínez,
  Tanvi Madaan, Wilfrid Jean Louis and Jessica Kirchner, for experimental and molecular
  support, as well as Friedrich Fochler for technical support with the chemical analysis,
  and the ISTA Lab Support Facility, including the mass spectrometry unit, for general
  and chemical laboratory support. We further thank Marco Ribezzi for advice on 13C
  calculations and Ernst Pittenauer for discussion of the chemical data, Chris Pull
  and Michael Sixt for project discussion and the Social Immunity team for comments
  on the manuscript. The study was funded by the European Research Council (ERC) under
  the European Union’s Horizon 2020 research and innovation Programme (No. 771402;
  EPIDEMICSonCHIP) to SC. '
article_processing_charge: No
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citation:
  ama: Cremer S. Altruistic disease signalling in ant colonies. 2025. doi:<a href="https://doi.org/10.15479/AT-ISTA-20471">10.15479/AT-ISTA-20471</a>
  apa: Cremer, S. (2025). Altruistic disease signalling in ant colonies. Institute
    of Science and Technology Austria. <a href="https://doi.org/10.15479/AT-ISTA-20471">https://doi.org/10.15479/AT-ISTA-20471</a>
  chicago: Cremer, Sylvia. “Altruistic Disease Signalling in Ant Colonies.” Institute
    of Science and Technology Austria, 2025. <a href="https://doi.org/10.15479/AT-ISTA-20471">https://doi.org/10.15479/AT-ISTA-20471</a>.
  ieee: S. Cremer, “Altruistic disease signalling in ant colonies.” Institute of Science
    and Technology Austria, 2025.
  ista: Cremer S. 2025. Altruistic disease signalling in ant colonies, Institute of
    Science and Technology Austria, <a href="https://doi.org/10.15479/AT-ISTA-20471">10.15479/AT-ISTA-20471</a>.
  mla: Cremer, Sylvia. <i>Altruistic Disease Signalling in Ant Colonies</i>. Institute
    of Science and Technology Austria, 2025, doi:<a href="https://doi.org/10.15479/AT-ISTA-20471">10.15479/AT-ISTA-20471</a>.
  short: S. Cremer, (2025).
contributor:
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  id: 31B4E2D0-F248-11E8-B48F-1D18A9856A87
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- first_name: Niklas
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  last_name: Kampleitner
- first_name: Anna V
  id: 406F989C-F248-11E8-B48F-1D18A9856A87
  last_name: Grasse
- first_name: Lukas
  id: 85f0e6d3-06b3-11ec-8982-8c5049fa4455
  last_name: Lindorfer
- first_name: Jennifer
  id: 7bc2734a-e2c6-11ea-9824-a2ed5f0662a8
  last_name: Robb
- first_name: Farnaz
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  last_name: Beikzadeh Abbasi
- first_name: Florian
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  last_name: Strahodinsky
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  id: 8fc5c6f6-5903-11ec-abad-c83f046253e7
  last_name: Leitner
- first_name: Harikrishnan
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  last_name: Rajendran
- first_name: Thomas
  last_name: Schmitt
- first_name: Sylvia
  id: 2F64EC8C-F248-11E8-B48F-1D18A9856A87
  last_name: Cremer
  orcid: 0000-0002-2193-3868
corr_author: '1'
date_created: 2025-10-16T09:02:16Z
date_published: 2025-10-16T00:00:00Z
date_updated: 2026-10-21T10:53:38Z
day: '16'
ddc:
- '570'
department:
- _id: SyCr
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ec_funded: 1
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keyword:
- host-parasite interactions
- social insects
- social immunity
- chemical communication
- cooperation
month: '10'
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title: Altruistic disease signalling in ant colonies
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abstract:
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  text: In this note, we prove a formula for the cancellation exponent  kv,n between
    division polynomials  ψn  and  ϕn  associated with a sequence  {nP}n∈N of points
    on an elliptic curve  E  defined over a discrete valuation field  K. The formula
    greatly generalizes the previously known special cases and treats also the case
    of non-standard Kodaira types for non-perfect residue fields.
acknowledgement: Silverman, and Paul Voutier for the comments on the earlier version
  of this paper. The first author acknowledges the support by Dioscuri programme initiated
  by the Max Planck Society, jointly managed with the National Science Centre (Poland),
  and mutually funded by the Polish Ministry of Science and Higher Education and the
  German Federal Ministry of Education and Research. The second author has been supported
  by MIUR (Italy) through PRIN 2017 ‘Geometric, algebraic and analytic methods in
  arithmetic’ and has received funding from the European Union's Horizon 2020 research
  and innovation programme under the Marie Skłodowska-Curie Grant Agreement No. 101034413.
article_processing_charge: Yes (via OA deal)
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arxiv: 1
author:
- first_name: Bartosz
  full_name: Naskręcki, Bartosz
  last_name: Naskręcki
- first_name: Matteo
  full_name: Verzobio, Matteo
  id: 7aa8f170-131e-11ed-88e1-a9efd01027cb
  last_name: Verzobio
  orcid: 0000-0002-0854-0306
citation:
  ama: 'Naskręcki B, Verzobio M. Common valuations of division polynomials. <i>Proceedings
    of the Royal Society of Edinburgh Section A: Mathematics</i>. 2025;155(5):1646-1660.
    doi:<a href="https://doi.org/10.1017/prm.2024.7">10.1017/prm.2024.7</a>'
  apa: 'Naskręcki, B., &#38; Verzobio, M. (2025). Common valuations of division polynomials.
    <i>Proceedings of the Royal Society of Edinburgh Section A: Mathematics</i>. Cambridge
    University Press. <a href="https://doi.org/10.1017/prm.2024.7">https://doi.org/10.1017/prm.2024.7</a>'
  chicago: 'Naskręcki, Bartosz, and Matteo Verzobio. “Common Valuations of Division
    Polynomials.” <i>Proceedings of the Royal Society of Edinburgh Section A: Mathematics</i>.
    Cambridge University Press, 2025. <a href="https://doi.org/10.1017/prm.2024.7">https://doi.org/10.1017/prm.2024.7</a>.'
  ieee: 'B. Naskręcki and M. Verzobio, “Common valuations of division polynomials,”
    <i>Proceedings of the Royal Society of Edinburgh Section A: Mathematics</i>, vol.
    155, no. 5. Cambridge University Press, pp. 1646–1660, 2025.'
  ista: 'Naskręcki B, Verzobio M. 2025. Common valuations of division polynomials.
    Proceedings of the Royal Society of Edinburgh Section A: Mathematics. 155(5),
    1646–1660.'
  mla: 'Naskręcki, Bartosz, and Matteo Verzobio. “Common Valuations of Division Polynomials.”
    <i>Proceedings of the Royal Society of Edinburgh Section A: Mathematics</i>, vol.
    155, no. 5, Cambridge University Press, 2025, pp. 1646–60, doi:<a href="https://doi.org/10.1017/prm.2024.7">10.1017/prm.2024.7</a>.'
  short: 'B. Naskręcki, M. Verzobio, Proceedings of the Royal Society of Edinburgh
    Section A: Mathematics 155 (2025) 1646–1660.'
corr_author: '1'
das_tickbox: '0'
date_created: 2023-01-16T11:45:22Z
date_published: 2025-10-01T00:00:00Z
date_updated: 2026-10-21T11:01:35Z
day: '01'
ddc:
- '510'
department:
- _id: TiBr
doi: 10.1017/prm.2024.7
ec_funded: 1
external_id:
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  - '2203.02015'
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  - '001174907100001'
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intvolume: '       155'
isi: 1
issue: '5'
keyword:
- Elliptic curves
- Néron models
- division polynomials
- height functions
- discrete valuation rings
language:
- iso: eng
month: '10'
oa: 1
oa_version: Published Version
page: 1646-1660
project:
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  grant_number: '101034413'
  name: 'IST-BRIDGE: International postdoctoral program'
publication: 'Proceedings of the Royal Society of Edinburgh Section A: Mathematics'
publication_identifier:
  eissn:
  - 1473-7124
  issn:
  - 0308-2105
publication_status: published
publisher: Cambridge University Press
quality_controlled: '1'
researchdata_availability: no
scopus_import: '1'
status: public
supplementarymaterial: no
title: Common valuations of division polynomials
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abstract:
- lang: eng
  text: Given a non-singular diagonal cubic hypersurface X⊂Pn−1 over Fq(t) with char(Fq)≠3,
    we show that the number of rational points of height at most |P| is O(|P|3+ε)
    for n=6 and O(|P|2+ε) for n=4. In fact, if n=4 and char(Fq)>3 we prove that the
    number of rational points away from any rational line contained in X is bounded
    by O(|P|3/2+ε). From the result in 6 variables we deduce weak approximation for
    diagonal cubic hypersurfaces for n≥7 over Fq(t) when char(Fq)>3 and handle Waring's
    problem for cubes in 7 variables over Fq(t) when char(Fq)≠3. Our results answer
    a question of Davenport regarding the number of solutions of bounded height to
    x31+x32+x33=x34+x35+x36 with xi∈Fq[t].
acknowledgement: "Open Access funding enabled and organized by Projekt DEAL.\r\nThe
  authors would like to thank Tim Browning for suggesting this project. Further they
  are grateful for his and Damaris Schindler’s helpful comments. We would also like
  to thank Efthymios Sofos for bringing Davenport’s question to our attention and
  Keith Matthews for providing us with scanned copies of the original correspondence.
  Finally we would like to thank the reviewer for helpful comments."
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Jakob
  full_name: Glas, Jakob
  id: d6423cba-dc74-11ea-a0a7-ee61689ff5fb
  last_name: Glas
- first_name: Leonhard
  full_name: Hochfilzer, Leonhard
  last_name: Hochfilzer
citation:
  ama: Glas J, Hochfilzer L. On a question of Davenport and diagonal cubic forms over
    Fq(t). <i>Mathematische Annalen</i>. 2025;391:5485-5533. doi:<a href="https://doi.org/10.1007/s00208-024-03035-z">10.1007/s00208-024-03035-z</a>
  apa: Glas, J., &#38; Hochfilzer, L. (2025). On a question of Davenport and diagonal
    cubic forms over Fq(t). <i>Mathematische Annalen</i>. Springer Nature. <a href="https://doi.org/10.1007/s00208-024-03035-z">https://doi.org/10.1007/s00208-024-03035-z</a>
  chicago: Glas, Jakob, and Leonhard Hochfilzer. “On a Question of Davenport and Diagonal
    Cubic Forms over Fq(T).” <i>Mathematische Annalen</i>. Springer Nature, 2025.
    <a href="https://doi.org/10.1007/s00208-024-03035-z">https://doi.org/10.1007/s00208-024-03035-z</a>.
  ieee: J. Glas and L. Hochfilzer, “On a question of Davenport and diagonal cubic
    forms over Fq(t),” <i>Mathematische Annalen</i>, vol. 391. Springer Nature, pp.
    5485–5533, 2025.
  ista: Glas J, Hochfilzer L. 2025. On a question of Davenport and diagonal cubic
    forms over Fq(t). Mathematische Annalen. 391, 5485–5533.
  mla: Glas, Jakob, and Leonhard Hochfilzer. “On a Question of Davenport and Diagonal
    Cubic Forms over Fq(T).” <i>Mathematische Annalen</i>, vol. 391, Springer Nature,
    2025, pp. 5485–533, doi:<a href="https://doi.org/10.1007/s00208-024-03035-z">10.1007/s00208-024-03035-z</a>.
  short: J. Glas, L. Hochfilzer, Mathematische Annalen 391 (2025) 5485–5533.
corr_author: '1'
das_tickbox: '1'
dataavailabilitystatement: "Data sharing is not applicable to this article as no datasets
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date_created: 2024-12-22T23:01:48Z
date_published: 2025-04-01T00:00:00Z
date_updated: 2026-10-21T11:06:30Z
day: '01'
ddc:
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department:
- _id: TiBr
doi: 10.1007/s00208-024-03035-z
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  isi:
  - '001376740400001'
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- iso: eng
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publisher: Springer Nature
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supplementarymaterial: no
title: On a question of Davenport and diagonal cubic forms over Fq(t)
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  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
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abstract:
- lang: eng
  text: Contract-based design is a promising methodology for taming the complexity
    of developing sophisticated systems. A formal contract distinguishes between assumptions,
    which are constraints that the designer of a component puts on the environments
    in which the component can be used safely, and guarantees, which are promises
    that the designer asks from the team that implements the component. A theory of
    formal contracts can be formalized as an interface theory, which supports the
    composition and refinement of both assumptions and guarantees. Although there
    is a rich landscape of contract-based design methods that address functional and
    extra-functional properties, we present the first interface theory designed to
    ensure system-wide security properties. Our framework provides a refinement relation
    and a composition operation that support both incremental design and independent
    implementability. We develop our theory for both stateless and stateful interfaces.
    Additionally, we introduce information-flow contracts where assumptions and guarantees
    are sets of flow relations. We use these contracts to illustrate how to enrich
    information-flow interfaces with a semantic view. We illustrate the applicability
    of our framework with two examples inspired by the automotive domain.
acknowledgement: This project has received funding from the European Union’s Horizon
  2020 research and innovation programme under grant agreement No 956123 and it was
  funded in part by the Austrian Science Fund (FWF) project W1255-N23, by the Austrian
  FWF project ZK-35, by the FWF project SpyCoDe 10.55776/F85 and by the ERC-2020-AdG
  101020093. This paper extends the text and the results of the manuscript published
  at FASE 2022 [1].
article_processing_charge: Yes (via OA deal)
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arxiv: 1
author:
- first_name: Ezio
  full_name: Bartocci, Ezio
  last_name: Bartocci
- first_name: Thomas
  full_name: Ferrere, Thomas
  id: 40960E6E-F248-11E8-B48F-1D18A9856A87
  last_name: Ferrere
  orcid: 0000-0001-5199-3143
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000-0002-2985-7724
- first_name: Dejan
  full_name: Nickovic, Dejan
  id: 41BCEE5C-F248-11E8-B48F-1D18A9856A87
  last_name: Nickovic
- first_name: Ana
  full_name: Oliveira da Costa, Ana
  id: f347ec37-6676-11ee-b395-a888cb7b4fb4
  last_name: Oliveira da Costa
  orcid: 0000-0002-8741-5799
citation:
  ama: Bartocci E, Ferrere T, Henzinger TA, Nickovic D, Oliveira da Costa A. Information-flow
    interfaces. <i>Formal Methods in System Design</i>. 2025;66:3-48. doi:<a href="https://doi.org/10.1007/s10703-024-00447-0">10.1007/s10703-024-00447-0</a>
  apa: Bartocci, E., Ferrere, T., Henzinger, T. A., Nickovic, D., &#38; Oliveira da
    Costa, A. (2025). Information-flow interfaces. <i>Formal Methods in System Design</i>.
    Springer Nature. <a href="https://doi.org/10.1007/s10703-024-00447-0">https://doi.org/10.1007/s10703-024-00447-0</a>
  chicago: Bartocci, Ezio, Thomas Ferrere, Thomas A Henzinger, Dejan Nickovic, and
    Ana Oliveira da Costa. “Information-Flow Interfaces.” <i>Formal Methods in System
    Design</i>. Springer Nature, 2025. <a href="https://doi.org/10.1007/s10703-024-00447-0">https://doi.org/10.1007/s10703-024-00447-0</a>.
  ieee: E. Bartocci, T. Ferrere, T. A. Henzinger, D. Nickovic, and A. Oliveira da
    Costa, “Information-flow interfaces,” <i>Formal Methods in System Design</i>,
    vol. 66. Springer Nature, pp. 3–48, 2025.
  ista: Bartocci E, Ferrere T, Henzinger TA, Nickovic D, Oliveira da Costa A. 2025.
    Information-flow interfaces. Formal Methods in System Design. 66, 3–48.
  mla: Bartocci, Ezio, et al. “Information-Flow Interfaces.” <i>Formal Methods in
    System Design</i>, vol. 66, Springer Nature, 2025, pp. 3–48, doi:<a href="https://doi.org/10.1007/s10703-024-00447-0">10.1007/s10703-024-00447-0</a>.
  short: E. Bartocci, T. Ferrere, T.A. Henzinger, D. Nickovic, A. Oliveira da Costa,
    Formal Methods in System Design 66 (2025) 3–48.
corr_author: '1'
das_tickbox: '1'
dataavailabilitystatement: "This manuscript has no associated data.\r\n\r\n"
date_created: 2024-06-02T22:00:57Z
date_published: 2025-05-01T00:00:00Z
date_updated: 2026-10-21T12:02:29Z
day: '01'
ddc:
- '000'
department:
- _id: ToHe
doi: 10.1007/s10703-024-00447-0
ec_funded: 1
external_id:
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  isi:
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isi: 1
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month: '05'
oa: 1
oa_version: Published Version
page: 3-48
project:
- _id: 62781420-2b32-11ec-9570-8d9b63373d4d
  call_identifier: H2020
  grant_number: '101020093'
  name: Vigilant Algorithmic Monitoring of Software
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  name: Interface Theory for Security and Privacy
publication: Formal Methods in System Design
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  issn:
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type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
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year: '2025'
...
---
OA_place: publisher
_id: '20339'
abstract:
- lang: eng
  text: "This thesis investigates the interplay between algebraic and topological
    methods and combinatorial problems, focusing on approximate graph colourings and
    mass partitioning. The unifying theme throughout the dissertation is the use of
    continuous maps and symmetry constraints to extract combinatorial insights.\r\n\r\nWe
    first explore approximate graph colouring problems and more generally promise
    constraint satisfaction problems. Using tools from equivariant topology in combination
    with the general theory of polymorphism of a promise constraint satisfaction problem,
    we establish hardness for specific types of approximations.\r\n\r\nIn the second
    part, we address mass partitioning problems, where one seeks to divide geometric
    objects or measures in Euclidean space into parts of equal size using hyperplanes.
    Employing techniques from topological combinatorics (configuration space/test
    map setup and Borsuk–Ulam type theorems), we both obtain a new equipartitioning
    result in the and provide a fast algorithm for computing equipartitioning of point
    sets in 3D.\r\n"
alternative_title:
- ISTA Thesis
article_processing_charge: No
author:
- first_name: Gianluca
  full_name: Tasinato, Gianluca
  id: 0433290C-AF8F-11E9-A4C7-F729E6697425
  last_name: Tasinato
citation:
  ama: 'Tasinato G. Topological methods in discrete geometry and theoretical computer
    science: Measure partitioning and constraint satisfaction problems. 2025. doi:<a
    href="https://doi.org/10.15479/AT-ISTA-20339">10.15479/AT-ISTA-20339</a>'
  apa: 'Tasinato, G. (2025). <i>Topological methods in discrete geometry and theoretical
    computer science: Measure partitioning and constraint satisfaction problems</i>.
    Institute of Science and Technology Austria. <a href="https://doi.org/10.15479/AT-ISTA-20339">https://doi.org/10.15479/AT-ISTA-20339</a>'
  chicago: 'Tasinato, Gianluca. “Topological Methods in Discrete Geometry and Theoretical
    Computer Science: Measure Partitioning and Constraint Satisfaction Problems.”
    Institute of Science and Technology Austria, 2025. <a href="https://doi.org/10.15479/AT-ISTA-20339">https://doi.org/10.15479/AT-ISTA-20339</a>.'
  ieee: 'G. Tasinato, “Topological methods in discrete geometry and theoretical computer
    science: Measure partitioning and constraint satisfaction problems,” Institute
    of Science and Technology Austria, 2025.'
  ista: 'Tasinato G. 2025. Topological methods in discrete geometry and theoretical
    computer science: Measure partitioning and constraint satisfaction problems. Institute
    of Science and Technology Austria.'
  mla: 'Tasinato, Gianluca. <i>Topological Methods in Discrete Geometry and Theoretical
    Computer Science: Measure Partitioning and Constraint Satisfaction Problems</i>.
    Institute of Science and Technology Austria, 2025, doi:<a href="https://doi.org/10.15479/AT-ISTA-20339">10.15479/AT-ISTA-20339</a>.'
  short: 'G. Tasinato, Topological Methods in Discrete Geometry and Theoretical Computer
    Science: Measure Partitioning and Constraint Satisfaction Problems, Institute
    of Science and Technology Austria, 2025.'
corr_author: '1'
date_created: 2025-09-10T12:17:55Z
date_published: 2025-09-10T00:00:00Z
date_updated: 2026-10-21T13:23:55Z
day: '10'
ddc:
- '516'
degree_awarded: PhD
department:
- _id: GradSch
- _id: UlWa
doi: 10.15479/AT-ISTA-20339
doi_confirm: '1'
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- iso: eng
license: https://creativecommons.org/licenses/by-nc-sa/4.0/
month: '09'
oa: 1
oa_version: Published Version
page: '106'
publication_identifier:
  issn:
  - 2663-337X
publication_status: published
publisher: Institute of Science and Technology Austria
related_material:
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    status: public
status: public
supervisor:
- first_name: Uli
  full_name: Wagner, Uli
  id: 36690CA2-F248-11E8-B48F-1D18A9856A87
  last_name: Wagner
  orcid: 0000-0002-1494-0568
title: 'Topological methods in discrete geometry and theoretical computer science:
  Measure partitioning and constraint satisfaction problems'
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...
---
OA_place: publisher
OA_type: hybrid
_id: '18157'
abstract:
- lang: eng
  text: "Interest in sliding block puzzles dates back to the 15-puzzle, seemingly
    invented by Noyes Chapman in 1874 (see [23] for an account of the fascinating
    history of the puzzle). The game consists of fifteen movable square blocks numbered
    \r\n and arranged within a \r\n square box, leaving one empty space (see Figure
    1). The task at hand is to start from a given configuration of the numbered blocks
    and reach the desired target configuration, where the only allowed move is to
    slide a numbered block into an adjacent empty space. This task seemed to be unpredictably
    either very easy to accomplish, or completely impossible, and the puzzle turned
    into a worldwide sensation in the spring of 1880. A particularly challenging instance,
    known as the 13-15-14 puzzle, consisted of initial and target configurations that
    differed by a single swap (historically this swap involved the blocks labeled
    14 and 15). The craze of this puzzle was such that it consistently made newspaper
    headlines in 1880, with an article in the New York Times lamenting that it was
    “threatening our free institutions” [23, p. 9]. Various prizes were offered for
    anyone who could solve this challenge, beginning with a $25 set of teeth and culminating
    with Sam Loyd’s famous $1,000 cash prize."
acknowledgement: Open access funding provided by Copenhagen University.
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Florestan R
  full_name: Brunck, Florestan R
  id: 6ab6e556-f394-11eb-9cf6-9dfb78f00d8d
  last_name: Brunck
- first_name: Matthew Alan
  full_name: Kwan, Matthew Alan
  id: 5fca0887-a1db-11eb-95d1-ca9d5e0453b3
  last_name: Kwan
  orcid: 0000-0002-4003-7567
citation:
  ama: 'Brunck FR, Kwan MA. Books, Hallways, and social butterflies: A note on sliding
    block puzzles. <i>Mathematical Intelligencer</i>. 2025;47:52-65. doi:<a href="https://doi.org/10.1007/s00283-024-10358-x">10.1007/s00283-024-10358-x</a>'
  apa: 'Brunck, F. R., &#38; Kwan, M. A. (2025). Books, Hallways, and social butterflies:
    A note on sliding block puzzles. <i>Mathematical Intelligencer</i>. Springer Nature.
    <a href="https://doi.org/10.1007/s00283-024-10358-x">https://doi.org/10.1007/s00283-024-10358-x</a>'
  chicago: 'Brunck, Florestan R, and Matthew Alan Kwan. “Books, Hallways, and Social
    Butterflies: A Note on Sliding Block Puzzles.” <i>Mathematical Intelligencer</i>.
    Springer Nature, 2025. <a href="https://doi.org/10.1007/s00283-024-10358-x">https://doi.org/10.1007/s00283-024-10358-x</a>.'
  ieee: 'F. R. Brunck and M. A. Kwan, “Books, Hallways, and social butterflies: A
    note on sliding block puzzles,” <i>Mathematical Intelligencer</i>, vol. 47. Springer
    Nature, pp. 52–65, 2025.'
  ista: 'Brunck FR, Kwan MA. 2025. Books, Hallways, and social butterflies: A note
    on sliding block puzzles. Mathematical Intelligencer. 47, 52–65.'
  mla: 'Brunck, Florestan R., and Matthew Alan Kwan. “Books, Hallways, and Social
    Butterflies: A Note on Sliding Block Puzzles.” <i>Mathematical Intelligencer</i>,
    vol. 47, Springer Nature, 2025, pp. 52–65, doi:<a href="https://doi.org/10.1007/s00283-024-10358-x">10.1007/s00283-024-10358-x</a>.'
  short: F.R. Brunck, M.A. Kwan, Mathematical Intelligencer 47 (2025) 52–65.
das_tickbox: '0'
date_created: 2024-09-29T22:01:38Z
date_published: 2025-03-01T00:00:00Z
date_updated: 2026-10-21T13:42:19Z
day: '01'
ddc:
- '510'
department:
- _id: UlWa
- _id: MaKw
doi: 10.1007/s00283-024-10358-x
external_id:
  arxiv:
  - '2303.09459'
  isi:
  - '001318056000001'
file:
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  checksum: c932ebe45c460d4a73f5b2dcca643db1
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  date_created: 2025-04-08T11:17:45Z
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  file_id: '19530'
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  success: 1
file_date_updated: 2025-04-08T11:17:45Z
fulldoi: https://doi.org/10.1007/s00283-024-10358-x
has_accepted_license: '1'
intvolume: '        47'
isi: 1
language:
- iso: eng
month: '03'
oa: 1
oa_version: Published Version
page: 52-65
publication: Mathematical Intelligencer
publication_identifier:
  issn:
  - 0343-6993
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
researchdata_availability: no
scopus_import: '1'
status: public
supplementarymaterial: no
title: 'Books, Hallways, and social butterflies: A note on sliding block puzzles'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 47
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '21007'
abstract:
- lang: eng
  text: 'Currently, the best known tradeoff between approximation ratio and complexity
    for the Sparsest Cut problem is achieved by the algorithm in [Sherman, FOCS 2009]:
    it computes O(√(log n)/ε)-approximation using O(nε logO(1) n) maxflows for any
    ε∈[Θ(1/log n),Θ(1)]. It works by solving the SDP relaxation of [Arora-Rao-Vazirani,
    STOC 2004] using the Multiplicative Weights Update algorithm (MW) of [Arora-Kale,
    JACM 2016]. To implement one MW step, Sherman approximately solves a multicommodity
    flow problem using another application of MW. Nested MW steps are solved via a
    certain "chaining" algorithm that combines results of multiple calls to the maxflow
    algorithm. We present an alternative approach that avoids solving the multicommodity
    flow problem and instead computes "violating paths". This simplifies Sherman''s
    algorithm by removing a need for a nested application of MW, and also allows parallelization:
    we show how to compute O(√(log n)/ε)-approximation via O(logO(1) n) maxflows using
    O(nε) processors. We also revisit Sherman''s chaining algorithm, and present a
    simpler version together with a new analysis.'
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Vladimir
  full_name: Kolmogorov, Vladimir
  id: 3D50B0BA-F248-11E8-B48F-1D18A9856A87
  last_name: Kolmogorov
citation:
  ama: Kolmogorov V. A simpler and parallelizable O(√log n)-approximation algorithm
    for SPARSEST CUT. <i>ACM Transactions on Algorithms</i>. 2025;21(4):1-22. doi:<a
    href="https://doi.org/10.1145/3748723">10.1145/3748723</a>
  apa: Kolmogorov, V. (2025). A simpler and parallelizable O(√log n)-approximation
    algorithm for SPARSEST CUT. <i>ACM Transactions on Algorithms</i>. Association
    for Computing Machinery. <a href="https://doi.org/10.1145/3748723">https://doi.org/10.1145/3748723</a>
  chicago: Kolmogorov, Vladimir. “A Simpler and Parallelizable O(√log n)-Approximation
    Algorithm for SPARSEST CUT.” <i>ACM Transactions on Algorithms</i>. Association
    for Computing Machinery, 2025. <a href="https://doi.org/10.1145/3748723">https://doi.org/10.1145/3748723</a>.
  ieee: V. Kolmogorov, “A simpler and parallelizable O(√log n)-approximation algorithm
    for SPARSEST CUT,” <i>ACM Transactions on Algorithms</i>, vol. 21, no. 4. Association
    for Computing Machinery, pp. 1–22, 2025.
  ista: Kolmogorov V. 2025. A simpler and parallelizable O(√log n)-approximation algorithm
    for SPARSEST CUT. ACM Transactions on Algorithms. 21(4), 1–22.
  mla: Kolmogorov, Vladimir. “A Simpler and Parallelizable O(√log n)-Approximation
    Algorithm for SPARSEST CUT.” <i>ACM Transactions on Algorithms</i>, vol. 21, no.
    4, Association for Computing Machinery, 2025, pp. 1–22, doi:<a href="https://doi.org/10.1145/3748723">10.1145/3748723</a>.
  short: V. Kolmogorov, ACM Transactions on Algorithms 21 (2025) 1–22.
corr_author: '1'
date_created: 2026-01-20T10:04:02Z
date_published: 2025-10-01T00:00:00Z
date_updated: 2026-10-21T13:45:27Z
day: '01'
ddc:
- '510'
department:
- _id: VlKo
doi: 10.1145/3748723
external_id:
  arxiv:
  - '2307.00115'
file:
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  checksum: 4a80fdb1e3711b9a2768d2bb8f6d3b4e
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  date_created: 2026-01-21T09:38:09Z
  date_updated: 2026-01-21T09:38:09Z
  file_id: '21031'
  file_name: 2025_ACMToA_Kolmogorov.pdf
  file_size: 2208302
  relation: main_file
  success: 1
file_date_updated: 2026-01-21T09:38:09Z
fulldoi: https://doi.org/10.1145/3748723
has_accepted_license: '1'
intvolume: '        21'
issue: '4'
language:
- iso: eng
month: '10'
oa: 1
oa_version: Published Version
page: 1-22
publication: ACM Transactions on Algorithms
publication_identifier:
  eissn:
  - 1549-6333
  issn:
  - 1549-6325
publication_status: published
publisher: Association for Computing Machinery
quality_controlled: '1'
related_material:
  record:
  - id: '17236'
    relation: shorter_version
    status: public
scopus_import: '1'
status: public
title: A simpler and parallelizable O(√log n)-approximation algorithm for SPARSEST
  CUT
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 21
year: '2025'
...
---
OA_place: repository
OA_type: green
_id: '19026'
abstract:
- lang: eng
  text: The back-action damping of mechanical motion by electromagnetic radiation
    is typically overwhelmed by internal loss channels unless demanding experimental
    ingredients such as superconducting resonators, high-quality optical cavities,
    or large magnetic fields are employed. Here we demonstrate the first room temperature,
    cavity-free, all-electric device where back-action damping exceeds internal loss,
    enabled by a mechanically compliant parallel-plate capacitor with a nanoscale
    plate separation and an aspect ratio exceeding 1,000. The device has 4 orders
    of magnitude lower insertion loss than a comparable commercial quartz crystal
    and achieves a position imprecision rivaling optical interferometers. With the
    help of a back-action isolation scheme, we observe radiative cooling of mechanical
    motion by a remote cryogenic load. This work provides a technologically accessible
    route to high-precision sensing, transduction, and signal processing.
acknowledged_ssus:
- _id: M-Shop
- _id: NanoFab
acknowledgement: We thank Carissa Kumar and Vibha Padmanabhan for assistance in comparing
  performance with devices across the literature. We thank Andrew Cleland for helpful
  comments on this work. We are grateful for support from the Miba Machine Shop and
  Nanofabrication facility at IST Austria. This work was supported by the Austrian
  FWF grant P33692–N and includes a recipient of a DOC Fellowship of the Austrian
  Academy of Sciences (DOC – No. 26088) at the Institute of Science and Technology,
  Austria.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Denise
  full_name: Puglia, Denise
  id: 4D495994-AE37-11E9-AC72-31CAE5697425
  last_name: Puglia
  orcid: 0000-0003-1144-2763
- first_name: Rachel H
  full_name: Odessey, Rachel H
  id: 9a7a5123-8972-11ed-ae7b-dd1f2af457bd
  last_name: Odessey
- first_name: Peter
  full_name: Burns, Peter
  last_name: Burns
- first_name: Niklas
  full_name: Luhmann, Niklas
  last_name: Luhmann
- first_name: Silvan
  full_name: Schmid, Silvan
  last_name: Schmid
- first_name: Andrew P
  full_name: Higginbotham, Andrew P
  id: 4AD6785A-F248-11E8-B48F-1D18A9856A87
  last_name: Higginbotham
  orcid: 0000-0003-2607-2363
citation:
  ama: Puglia D, Odessey RH, Burns P, Luhmann N, Schmid S, Higginbotham AP. Room temperature,
    cavity-free capacitive strong coupling to mechanical motion. <i>Nano Letters</i>.
    2025;25(7):2749-2755. doi:<a href="https://doi.org/10.1021/acs.nanolett.4c05796">10.1021/acs.nanolett.4c05796</a>
  apa: Puglia, D., Odessey, R. H., Burns, P., Luhmann, N., Schmid, S., &#38; Higginbotham,
    A. P. (2025). Room temperature, cavity-free capacitive strong coupling to mechanical
    motion. <i>Nano Letters</i>. American Chemical Society. <a href="https://doi.org/10.1021/acs.nanolett.4c05796">https://doi.org/10.1021/acs.nanolett.4c05796</a>
  chicago: Puglia, Denise, Rachel H Odessey, Peter Burns, Niklas Luhmann, Silvan Schmid,
    and Andrew P Higginbotham. “Room Temperature, Cavity-Free Capacitive Strong Coupling
    to Mechanical Motion.” <i>Nano Letters</i>. American Chemical Society, 2025. <a
    href="https://doi.org/10.1021/acs.nanolett.4c05796">https://doi.org/10.1021/acs.nanolett.4c05796</a>.
  ieee: D. Puglia, R. H. Odessey, P. Burns, N. Luhmann, S. Schmid, and A. P. Higginbotham,
    “Room temperature, cavity-free capacitive strong coupling to mechanical motion,”
    <i>Nano Letters</i>, vol. 25, no. 7. American Chemical Society, pp. 2749–2755,
    2025.
  ista: Puglia D, Odessey RH, Burns P, Luhmann N, Schmid S, Higginbotham AP. 2025.
    Room temperature, cavity-free capacitive strong coupling to mechanical motion.
    Nano Letters. 25(7), 2749–2755.
  mla: Puglia, Denise, et al. “Room Temperature, Cavity-Free Capacitive Strong Coupling
    to Mechanical Motion.” <i>Nano Letters</i>, vol. 25, no. 7, American Chemical
    Society, 2025, pp. 2749–55, doi:<a href="https://doi.org/10.1021/acs.nanolett.4c05796">10.1021/acs.nanolett.4c05796</a>.
  short: D. Puglia, R.H. Odessey, P. Burns, N. Luhmann, S. Schmid, A.P. Higginbotham,
    Nano Letters 25 (2025) 2749–2755.
corr_author: '1'
date_created: 2025-02-16T23:02:34Z
date_published: 2025-02-06T00:00:00Z
date_updated: 2026-10-21T14:08:09Z
day: '06'
department:
- _id: AnHi
doi: 10.1021/acs.nanolett.4c05796
external_id:
  arxiv:
  - '2407.15314'
  isi:
  - '001415246000001'
fulldoi: https://doi.org/10.1021/acs.nanolett.4c05796
intvolume: '        25'
isi: 1
issue: '7'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2407.15314
month: '02'
oa: 1
oa_version: Preprint
page: 2749-2755
project:
- _id: 0aa3608a-070f-11eb-9043-e9cd8a2bd931
  grant_number: P33692
  name: Cavity electromechanics across a quantum phase transition
- _id: 62843413-2b32-11ec-9570-c4ec6eabfae7
  grant_number: '26088'
  name: Surface Charge and Tunneling Multi-Mode Imaging
publication: Nano Letters
publication_identifier:
  eissn:
  - 1530-6992
  issn:
  - 1530-6984
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
related_material:
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scopus_import: '1'
status: public
title: Room temperature, cavity-free capacitive strong coupling to mechanical motion
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 25
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '20656'
abstract:
- lang: eng
  text: Phytohormone auxin and its directional transport mediate much of the remarkably
    plastic development of higher plants. Positive feedback between auxin signaling
    and transport is a prerequisite for (1) self-organizing processes, including vascular
    tissue formation, and (2) directional growth responses such as gravitropism. Here,
    we identify a mechanism by which auxin signaling directly targets PIN auxin transporters.
    Via the cell-surface AUXIN-BINDING PROTEIN1 (ABP1)-TRANSMEMBRANE KINASE 1 (TMK1)
    receptor module, auxin rapidly induces phosphorylation and thus stabilization
    of PIN2. Following gravistimulation, initial auxin asymmetry activates autophosphorylation
    of the TMK1 kinase. This induces TMK1 interaction with and phosphorylation of
    PIN2, stabilizing PIN2 at the lower root side, thus reinforcing asymmetric auxin
    flow for root bending. Upstream of TMK1 in this regulation, ABP1 acts redundantly
    with the root-expressed ABP1-LIKE 3 (ABL3) auxin receptor. Such positive feedback
    between cell-surface auxin signaling and PIN-mediated polar auxin transport is
    fundamental for robust root gravitropism and presumably for other self-organizing
    developmental phenomena.
acknowledged_ssus:
- _id: Bio
- _id: LifeSc
acknowledgement: We gratefully acknowledge Tongda Xu for experimental, material, and
  conceptual support. We thank William Gray for providing material, Nataliia Gnyliukh
  and Ema Cervenova for help with manuscript preparation, and Julia Schmid for help
  with cloning. We thank Dolf Weijers, Mark Roosjen, and Andre Kuhn for discussions
  and support with phospho-proteomic analyses. We thank the Bioimaging and Life Science
  facilities at the Institute of Science and Technology Austria (ISTA) for their excellent
  service and assistance. The research leading to these results has received funding
  from the European Union (ERC, CYNIPS, 101142681) and Austrian Science Fund (FWF;
  I 6123-B) to J.F., and Y.J. was funded by ERC no. 3363360-APPL under FP/2007-2013.
  L.R. was supported by the FP7-PEOPLE-2011-COFUND ISTFELLOW program (IC1023FELL01)
  and the European Molecular Biology Organization (EMBO) long-term postdoctoral fellowship
  (ALTF 985-2016). S.T. was supported by the National Natural Science Foundation of
  China (32321001, 32570366). The work of J.H. was supported by the project JG_2024_003
  implemented within the Palacký University Young Researcher Grant.
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Lesia
  full_name: Rodriguez Solovey, Lesia
  id: 3922B506-F248-11E8-B48F-1D18A9856A87
  last_name: Rodriguez Solovey
  orcid: 0000-0002-7244-7237
- first_name: Lukas
  full_name: Fiedler, Lukas
  id: 7c417475-8972-11ed-ae7b-8b674ca26986
  last_name: Fiedler
- first_name: Minxia
  full_name: Zou, Minxia
  id: 5c243f41-03f3-11ec-841c-96faf48a7ef9
  last_name: Zou
- first_name: Caterina
  full_name: Giannini, Caterina
  id: e3fdddd5-f6e0-11ea-865d-ca99ee6367f4
  last_name: Giannini
- first_name: Aline
  full_name: Monzer, Aline
  id: 2DB5D88C-D7B3-11E9-B8FD-7907E6697425
  last_name: Monzer
- first_name: Dmitrii
  full_name: Vladimirtsev, Dmitrii
  id: 60466724-5355-11ee-ae5a-fa55e8f99c3d
  last_name: Vladimirtsev
- first_name: Marek
  full_name: Randuch, Marek
  id: 6ac4636d-15b2-11ec-abd3-fb8df79972ae
  last_name: Randuch
- first_name: Yongfan
  full_name: Yu, Yongfan
  last_name: Yu
- first_name: Zuzana
  full_name: Gelová, Zuzana
  id: 0AE74790-0E0B-11E9-ABC7-1ACFE5697425
  last_name: Gelová
  orcid: 0000-0003-4783-1752
- first_name: Inge
  full_name: Verstraeten, Inge
  id: 362BF7FE-F248-11E8-B48F-1D18A9856A87
  last_name: Verstraeten
  orcid: 0000-0001-7241-2328
- first_name: Jakub
  full_name: Hajny, Jakub
  id: 4800CC20-F248-11E8-B48F-1D18A9856A87
  last_name: Hajny
  orcid: 0000-0003-2140-7195
- first_name: Meng
  full_name: Chen, Meng
  last_name: Chen
- first_name: Shutang
  full_name: Tan, Shutang
  id: 2DE75584-F248-11E8-B48F-1D18A9856A87
  last_name: Tan
  orcid: 0000-0002-0471-8285
- first_name: Lukas
  full_name: Hörmayer, Lukas
  id: 2EEE7A2A-F248-11E8-B48F-1D18A9856A87
  last_name: Hörmayer
  orcid: 0000-0001-8295-2926
- first_name: Lanxin
  full_name: Li, Lanxin
  id: 367EF8FA-F248-11E8-B48F-1D18A9856A87
  last_name: Li
  orcid: 0000-0002-5607-272X
- first_name: Maria Mar
  full_name: Marques-Bueno, Maria Mar
  last_name: Marques-Bueno
- first_name: Zainab
  full_name: Quddoos, Zainab
  id: 32ff3c64-04a0-11f0-a50f-d0c45bfac466
  last_name: Quddoos
- first_name: Gergely
  full_name: Molnar, Gergely
  id: 34F1AF46-F248-11E8-B48F-1D18A9856A87
  last_name: Molnar
- first_name: Ivan
  full_name: Kulich, Ivan
  id: 57a1567c-8314-11eb-9063-c9ddc3451a54
  last_name: Kulich
- first_name: Yvon
  full_name: Jaillais, Yvon
  last_name: Jaillais
- first_name: Jiří
  full_name: Friml, Jiří
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
citation:
  ama: Rodriguez Solovey L, Fiedler L, Zou M, et al. ABP1/ABL3-TMK1 cell-surface auxin
    signaling targets PIN2-mediated auxin fluxes for root gravitropism. <i>Cell</i>.
    2025;188(22):6138-6150.e17. doi:<a href="https://doi.org/10.1016/j.cell.2025.08.026">10.1016/j.cell.2025.08.026</a>
  apa: Rodriguez Solovey, L., Fiedler, L., Zou, M., Giannini, C., Monzer, A., Vladimirtsev,
    D., … Friml, J. (2025). ABP1/ABL3-TMK1 cell-surface auxin signaling targets PIN2-mediated
    auxin fluxes for root gravitropism. <i>Cell</i>. Cell Press. <a href="https://doi.org/10.1016/j.cell.2025.08.026">https://doi.org/10.1016/j.cell.2025.08.026</a>
  chicago: Rodriguez Solovey, Lesia, Lukas Fiedler, Minxia Zou, Caterina Giannini,
    Aline Monzer, Dmitrii Vladimirtsev, Marek Randuch, et al. “ABP1/ABL3-TMK1 Cell-Surface
    Auxin Signaling Targets PIN2-Mediated Auxin Fluxes for Root Gravitropism.” <i>Cell</i>.
    Cell Press, 2025. <a href="https://doi.org/10.1016/j.cell.2025.08.026">https://doi.org/10.1016/j.cell.2025.08.026</a>.
  ieee: L. Rodriguez Solovey <i>et al.</i>, “ABP1/ABL3-TMK1 cell-surface auxin signaling
    targets PIN2-mediated auxin fluxes for root gravitropism,” <i>Cell</i>, vol. 188,
    no. 22. Cell Press, p. 6138–6150.e17, 2025.
  ista: Rodriguez Solovey L, Fiedler L, Zou M, Giannini C, Monzer A, Vladimirtsev
    D, Randuch M, Yu Y, Gelová Z, Verstraeten I, Hajny J, Chen M, Tan S, Hörmayer
    L, Li L, Marques-Bueno MM, Quddoos Z, Molnar G, Kulich I, Jaillais Y, Friml J.
    2025. ABP1/ABL3-TMK1 cell-surface auxin signaling targets PIN2-mediated auxin
    fluxes for root gravitropism. Cell. 188(22), 6138–6150.e17.
  mla: Rodriguez Solovey, Lesia, et al. “ABP1/ABL3-TMK1 Cell-Surface Auxin Signaling
    Targets PIN2-Mediated Auxin Fluxes for Root Gravitropism.” <i>Cell</i>, vol. 188,
    no. 22, Cell Press, 2025, p. 6138–6150.e17, doi:<a href="https://doi.org/10.1016/j.cell.2025.08.026">10.1016/j.cell.2025.08.026</a>.
  short: L. Rodriguez Solovey, L. Fiedler, M. Zou, C. Giannini, A. Monzer, D. Vladimirtsev,
    M. Randuch, Y. Yu, Z. Gelová, I. Verstraeten, J. Hajny, M. Chen, S. Tan, L. Hörmayer,
    L. Li, M.M. Marques-Bueno, Z. Quddoos, G. Molnar, I. Kulich, Y. Jaillais, J. Friml,
    Cell 188 (2025) 6138–6150.e17.
corr_author: '1'
date_created: 2025-11-19T09:44:31Z
date_published: 2025-10-30T00:00:00Z
date_updated: 2026-10-22T09:15:44Z
day: '30'
ddc:
- '580'
department:
- _id: JiFr
- _id: XiFe
doi: 10.1016/j.cell.2025.08.026
ec_funded: 1
external_id:
  isi:
  - '001616077900005'
  pmid:
  - '41043433'
file:
- access_level: open_access
  checksum: 8ac396a0806ad7f2e4e7a0c1eed712ce
  content_type: application/pdf
  creator: dernst
  date_created: 2025-11-24T10:55:18Z
  date_updated: 2025-11-24T10:55:18Z
  file_id: '20679'
  file_name: 2025_Cell_Rodriguez.pdf
  file_size: 17825465
  relation: main_file
  success: 1
file_date_updated: 2025-11-24T10:55:18Z
fulldoi: https://doi.org/10.1016/j.cell.2025.08.026
has_accepted_license: '1'
intvolume: '       188'
isi: 1
issue: '22'
language:
- iso: eng
month: '10'
oa: 1
oa_version: Published Version
page: 6138-6150.e17
pmid: 1
project:
- _id: 8f347782-16d5-11f0-9cad-8c19706ee739
  grant_number: '101142681'
  name: Cyclic nucleotides as second messengers in plants
- _id: bd76d395-d553-11ed-ba76-f678c14f9033
  grant_number: I06123
  name: Peptide receptors for auxin canalization in Arabidopsis
- _id: 26060676-B435-11E9-9278-68D0E5697425
  grant_number: ALTF 985-2016
  name: Cell surface receptor complexes for auxin signaling in plants
- _id: 25681D80-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '291734'
  name: International IST Postdoc Fellowship Programme
publication: Cell
publication_identifier:
  issn:
  - 0092-8674
publication_status: published
publisher: Cell Press
quality_controlled: '1'
related_material:
  record:
  - id: '19399'
    relation: earlier_version
    status: public
  - id: '23145'
    relation: dissertation_contains
    status: public
status: public
title: ABP1/ABL3-TMK1 cell-surface auxin signaling targets PIN2-mediated auxin fluxes
  for root gravitropism
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 188
year: '2025'
...
---
OA_place: repository
OA_type: green
_id: '23174'
abstract:
- lang: eng
  text: Roots must continuously adapt their growth and have evolved the ability to
    rapidly respond to diverse environmental and hormonal cues, including the phytohormone
    auxin. Auxin-induced cellular responses involve membrane depolarization, cytosolic
    calcium (Ca²⁺) elevation, and extracellular pH increase, but how these processes
    lead to rapid growth regulation remains unclear. Here, we show that cytosolic
    Ca²⁺ acts as a universal signal integrating diverse cues for rapid regulation
    of root growth. Using live imaging, microfluidics, and optogenetics in Arabidopsis,
    we demonstrate that a swift rise in cytosolic Ca²⁺ is the primary target of auxin
    signaling affecting growth inhibition. Disruption of Ca²⁺ influx abolishes these
    responses, whereas light-gated Ca²⁺ influx from the apoplast or endoplasmic reticulum
    stores inhibits growth. Multiple unrelated stimuli—including auxin, extracellular
    ATP, RALF peptides, and hydrogen peroxide—converge on this Ca²⁺-dependent mechanism.
    Cytosolic Ca²⁺ elevation thus represents a necessary and sufficient step for rapid
    growth inhibition, revealing a unifying principle of root signaling.
acknowledgement: "We gratefully acknowledge Dr. Andrea Bleckmann, creator of pBLAX000
  vector and Dr. Shiqiang Gao for donation of template used in XXM-ER cloning. This
  research was supported by the Laboratory Support Facility, the Plant Facility, the
  IT Facility and the Imaging and Optical Facility of the Institute of Science and
  Technology Austria. The graphical elements used in Fig. 5 were adapted and modified
  from Servier, https://smart.servier.com, and are used under CC BY 3.0 licence. The
  authors acknowledge the use of AI-tools (Microsoft Copilot, Gemini) for language
  refinement. All content was critically reviewed by authors.\r\n\r\nFunder Information
  Declared\r\nEuropean Research Council, 101142681 CYNIPS\r\nAustrian Science Fund,
  P 37051-B"
article_processing_charge: No
author:
- first_name: Marek
  full_name: Randuch, Marek
  id: 6ac4636d-15b2-11ec-abd3-fb8df79972ae
  last_name: Randuch
- first_name: Ivan
  full_name: Kulich, Ivan
  id: 57a1567c-8314-11eb-9063-c9ddc3451a54
  last_name: Kulich
- first_name: Dmitrii
  full_name: Vladimirtsev, Dmitrii
  id: 60466724-5355-11ee-ae5a-fa55e8f99c3d
  last_name: Vladimirtsev
- first_name: Shouguang
  full_name: Huang, Shouguang
  last_name: Huang
- first_name: Rainer
  full_name: Hedrich, Rainer
  last_name: Hedrich
- first_name: Jiří
  full_name: Friml, Jiří
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
biorxivid: 1
citation:
  ama: Randuch M, Kulich I, Vladimirtsev D, Huang S, Hedrich R, Friml J. Cytosolic
    Ca2+ as a universal signal for rapid root growth regulation. <i>bioRxiv</i>. doi:<a
    href="https://doi.org/10.1101/2025.10.17.683082">10.1101/2025.10.17.683082</a>
  apa: Randuch, M., Kulich, I., Vladimirtsev, D., Huang, S., Hedrich, R., &#38; Friml,
    J. (n.d.). Cytosolic Ca2+ as a universal signal for rapid root growth regulation.
    <i>bioRxiv</i>. <a href="https://doi.org/10.1101/2025.10.17.683082">https://doi.org/10.1101/2025.10.17.683082</a>
  chicago: Randuch, Marek, Ivan Kulich, Dmitrii Vladimirtsev, Shouguang Huang, Rainer
    Hedrich, and Jiří Friml. “Cytosolic Ca2+ as a Universal Signal for Rapid Root
    Growth Regulation.” <i>BioRxiv</i>, n.d. <a href="https://doi.org/10.1101/2025.10.17.683082">https://doi.org/10.1101/2025.10.17.683082</a>.
  ieee: M. Randuch, I. Kulich, D. Vladimirtsev, S. Huang, R. Hedrich, and J. Friml,
    “Cytosolic Ca2+ as a universal signal for rapid root growth regulation,” <i>bioRxiv</i>.
    .
  ista: Randuch M, Kulich I, Vladimirtsev D, Huang S, Hedrich R, Friml J. Cytosolic
    Ca2+ as a universal signal for rapid root growth regulation. bioRxiv, <a href="https://doi.org/10.1101/2025.10.17.683082">10.1101/2025.10.17.683082</a>.
  mla: Randuch, Marek, et al. “Cytosolic Ca2+ as a Universal Signal for Rapid Root
    Growth Regulation.” <i>BioRxiv</i>, doi:<a href="https://doi.org/10.1101/2025.10.17.683082">10.1101/2025.10.17.683082</a>.
  short: M. Randuch, I. Kulich, D. Vladimirtsev, S. Huang, R. Hedrich, J. Friml, BioRxiv
    (n.d.).
corr_author: '1'
date_created: 2026-10-19T11:44:48Z
date_published: 2025-10-17T00:00:00Z
date_updated: 2026-10-22T09:15:44Z
day: '17'
department:
- _id: JiFr
doi: 10.1101/2025.10.17.683082
external_id:
  biorxivid:
  - 10.1101/2025.10.17.683082
fulldoi: https://doi.org/10.1101/2025.10.17.683082
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1101/2025.10.17.683082
month: '10'
oa: 1
oa_version: Preprint
project:
- _id: 8f347782-16d5-11f0-9cad-8c19706ee739
  grant_number: '101142681'
  name: Cyclic nucleotides as second messengers in plants
- _id: 7bcece63-9f16-11ee-852c-ae94e099eeb6
  grant_number: P37051
  name: Guanylate cyclase activity of TIR1/AFBs auxin receptors
publication: bioRxiv
publication_status: draft
related_material:
  record:
  - id: '23145'
    relation: dissertation_contains
    status: public
status: public
title: Cytosolic Ca2+ as a universal signal for rapid root growth regulation
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2025'
...
