---
_id: '15296'
abstract:
- lang: eng
text: In this paper we build a constructive algorithm that returns a rectifiable
curve that connects two points in a weakly convex set in a Hilbert space. We have
proven that this algorithm converges and obtained an estimate on the curve’s length
and compare the length of the curve obtained to known results.
article_number: '080002'
article_processing_charge: No
author:
- first_name: Mariana
full_name: Lopushanski, Mariana
last_name: Lopushanski
- first_name: Grigory
full_name: Ivanov, Grigory
id: 87744F66-5C6F-11EA-AFE0-D16B3DDC885E
last_name: Ivanov
citation:
ama: 'Lopushanski M, Ivanov G. A constructive algorithm for building rectifiable
curves in weakly convex sets. In: AIP Conference Proceedings. Vol 3030.
AIP Publishing; 2024. doi:10.1063/5.0195908'
apa: 'Lopushanski, M., & Ivanov, G. (2024). A constructive algorithm for building
rectifiable curves in weakly convex sets. In AIP Conference Proceedings
(Vol. 3030). Virtual: AIP Publishing. https://doi.org/10.1063/5.0195908'
chicago: Lopushanski, Mariana, and Grigory Ivanov. “A Constructive Algorithm for
Building Rectifiable Curves in Weakly Convex Sets.” In AIP Conference Proceedings,
Vol. 3030. AIP Publishing, 2024. https://doi.org/10.1063/5.0195908.
ieee: M. Lopushanski and G. Ivanov, “A constructive algorithm for building rectifiable
curves in weakly convex sets,” in AIP Conference Proceedings, Virtual,
2024, vol. 3030, no. 1.
ista: 'Lopushanski M, Ivanov G. 2024. A constructive algorithm for building rectifiable
curves in weakly convex sets. AIP Conference Proceedings. ICCMSE: International
Conference of Computational Methods in Sciences and Engiineering vol. 3030, 080002.'
mla: Lopushanski, Mariana, and Grigory Ivanov. “A Constructive Algorithm for Building
Rectifiable Curves in Weakly Convex Sets.” AIP Conference Proceedings,
vol. 3030, no. 1, 080002, AIP Publishing, 2024, doi:10.1063/5.0195908.
short: M. Lopushanski, G. Ivanov, in:, AIP Conference Proceedings, AIP Publishing,
2024.
conference:
end_date: 2022-10-29
location: Virtual
name: 'ICCMSE: International Conference of Computational Methods in Sciences and
Engiineering'
start_date: 2022-10-26
date_created: 2024-04-07T22:00:55Z
date_published: 2024-03-14T00:00:00Z
date_updated: 2024-04-08T07:40:53Z
day: '14'
department:
- _id: UlWa
doi: 10.1063/5.0195908
intvolume: ' 3030'
issue: '1'
language:
- iso: eng
month: '03'
oa_version: None
publication: AIP Conference Proceedings
publication_identifier:
eissn:
- 1551-7616
issn:
- 0094-243X
publication_status: published
publisher: AIP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: A constructive algorithm for building rectifiable curves in weakly convex sets
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 3030
year: '2024'
...
---
_id: '15301'
abstract:
- lang: eng
text: Plant morphogenesis relies exclusively on oriented cell expansion and division.
Nonetheless, the mechanism(s) determining division plane orientation remain elusive.
Here, we studied tissue healing after laser-assisted wounding in roots of Arabidopsis
thaliana and uncovered how mechanical forces stabilize and reorient the microtubule
cytoskeleton for the orientation of cell division. We identified that root tissue
functions as an interconnected cell matrix, with a radial gradient of tissue extendibility
causing predictable tissue deformation after wounding. This deformation causes
instant redirection of expansion in the surrounding cells and reorientation of
microtubule arrays, ultimately predicting cell division orientation. Microtubules
are destabilized under low tension, whereas stretching of cells, either through
wounding or external aspiration, immediately induces their polymerization. The
higher microtubule abundance in the stretched cell parts leads to the reorientation
of microtubule arrays and, ultimately, informs cell division planes. This provides
a long-sought mechanism for flexible re-arrangement of cell divisions by mechanical
forces for tissue reconstruction and plant architecture.
acknowledged_ssus:
- _id: Bio
- _id: LifeSc
acknowledgement: We are thankful to Simon Gilroy, Alexander Jones, and Lieven De Veylder
for sharing published material. We thank the Imaging & Optics and Life Science Facilities
at IST Austria, the Biooptics facility at GMI, and the Cellular Imaging Facility
at DBMV UNIL for providing invaluable assistance. The research leading to these
results has received funding from the European Research Council under the European
Union's Seventh Framework Programme (FP7/2007-2013)/ERC grant agreement no. 742985,
from the FWF under the stand-alone grant P29988, and from EMBO (ALTF 253-2023).
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Lukas
full_name: Hörmayer, Lukas
id: 2EEE7A2A-F248-11E8-B48F-1D18A9856A87
last_name: Hörmayer
orcid: 0000-0001-8295-2926
- first_name: Juan C
full_name: Montesinos López, Juan C
id: 310A8E3E-F248-11E8-B48F-1D18A9856A87
last_name: Montesinos López
orcid: 0000-0001-9179-6099
- first_name: N
full_name: Trozzi, N
last_name: Trozzi
- first_name: Leonhard
full_name: Spona, Leonhard
id: b52391fb-f636-11ee-939c-8a8c47552e8a
last_name: Spona
- first_name: Saiko
full_name: Yoshida, Saiko
id: 2E46069C-F248-11E8-B48F-1D18A9856A87
last_name: Yoshida
- first_name: Petra
full_name: Marhavá, Petra
id: 44E59624-F248-11E8-B48F-1D18A9856A87
last_name: Marhavá
- first_name: Silvia
full_name: Caballero Mancebo, Silvia
id: 2F1E1758-F248-11E8-B48F-1D18A9856A87
last_name: Caballero Mancebo
orcid: 0000-0002-5223-3346
- first_name: Eva
full_name: Benková, Eva
id: 38F4F166-F248-11E8-B48F-1D18A9856A87
last_name: Benková
orcid: 0000-0002-8510-9739
- first_name: Carl-Philipp J
full_name: Heisenberg, Carl-Philipp J
id: 39427864-F248-11E8-B48F-1D18A9856A87
last_name: Heisenberg
orcid: 0000-0002-0912-4566
- first_name: Y
full_name: Dagdas, Y
last_name: Dagdas
- first_name: M
full_name: Majda, M
last_name: Majda
- first_name: Jiří
full_name: Friml, Jiří
id: 4159519E-F248-11E8-B48F-1D18A9856A87
last_name: Friml
orcid: 0000-0002-8302-7596
citation:
ama: Hörmayer L, Montesinos López JC, Trozzi N, et al. Mechanical forces in plant
tissue matrix orient cell divisions via microtubule stabilization. Developmental
Cell. 2024;59(10):1333-1344.e4. doi:10.1016/j.devcel.2024.03.009
apa: Hörmayer, L., Montesinos López, J. C., Trozzi, N., Spona, L., Yoshida, S.,
Marhavá, P., … Friml, J. (2024). Mechanical forces in plant tissue matrix orient
cell divisions via microtubule stabilization. Developmental Cell. Elsevier.
https://doi.org/10.1016/j.devcel.2024.03.009
chicago: Hörmayer, Lukas, Juan C Montesinos López, N Trozzi, Leonhard Spona, Saiko
Yoshida, Petra Marhavá, Silvia Caballero Mancebo, et al. “Mechanical Forces in
Plant Tissue Matrix Orient Cell Divisions via Microtubule Stabilization.” Developmental
Cell. Elsevier, 2024. https://doi.org/10.1016/j.devcel.2024.03.009.
ieee: L. Hörmayer et al., “Mechanical forces in plant tissue matrix orient
cell divisions via microtubule stabilization,” Developmental Cell, vol.
59, no. 10. Elsevier, p. 1333–1344.e4, 2024.
ista: Hörmayer L, Montesinos López JC, Trozzi N, Spona L, Yoshida S, Marhavá P,
Caballero Mancebo S, Benková E, Heisenberg C-PJ, Dagdas Y, Majda M, Friml J. 2024.
Mechanical forces in plant tissue matrix orient cell divisions via microtubule
stabilization. Developmental Cell. 59(10), 1333–1344.e4.
mla: Hörmayer, Lukas, et al. “Mechanical Forces in Plant Tissue Matrix Orient Cell
Divisions via Microtubule Stabilization.” Developmental Cell, vol. 59,
no. 10, Elsevier, 2024, p. 1333–1344.e4, doi:10.1016/j.devcel.2024.03.009.
short: L. Hörmayer, J.C. Montesinos López, N. Trozzi, L. Spona, S. Yoshida, P. Marhavá,
S. Caballero Mancebo, E. Benková, C.-P.J. Heisenberg, Y. Dagdas, M. Majda, J.
Friml, Developmental Cell 59 (2024) 1333–1344.e4.
corr_author: '1'
date_created: 2024-04-08T12:07:57Z
date_published: 2024-05-20T00:00:00Z
date_updated: 2025-09-04T13:32:08Z
day: '20'
ddc:
- '570'
department:
- _id: JiFr
- _id: EvBe
- _id: CaHe
doi: 10.1016/j.devcel.2024.03.009
ec_funded: 1
external_id:
isi:
- '001301584600001'
pmid:
- '38579717'
file:
- access_level: open_access
checksum: 22b374fb50a40d380b7686c84258d271
content_type: application/pdf
creator: dernst
date_created: 2024-08-20T11:22:16Z
date_updated: 2024-08-20T11:22:16Z
file_id: '17452'
file_name: 2024_DevelopmentalCell_Hoermayer.pdf
file_size: 5195262
relation: main_file
success: 1
file_date_updated: 2024-08-20T11:22:16Z
has_accepted_license: '1'
intvolume: ' 59'
isi: 1
issue: '10'
language:
- iso: eng
month: '05'
oa: 1
oa_version: Published Version
page: 1333-1344.e4
pmid: 1
project:
- _id: 261099A6-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '742985'
name: Tracing Evolution of Auxin Transport and Polarity in Plants
- _id: 262EF96E-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: P29988
name: RNA-directed DNA methylation in plant development
publication: Developmental Cell
publication_identifier:
eissn:
- 1878-1551
issn:
- 1534-5807
publication_status: published
publisher: Elsevier
quality_controlled: '1'
related_material:
link:
- description: News on ISTA website
relation: press_release
url: https://ista.ac.at/en/news/how-plants-heal-wounds/
scopus_import: '1'
status: public
title: Mechanical forces in plant tissue matrix orient cell divisions via microtubule
stabilization
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 59
year: '2024'
...
---
OA_place: publisher
OA_type: hybrid
_id: '15313'
abstract:
- lang: eng
text: Our goal is to investigate fundamental properties of the system of internally
cooled convection. The system consists of an upward thermal flux at the lower
boundary, a mean temperature lapse-rate and a constant cooling term in the bulk
with the bulk cooling in thermal equilibrium with the input heat flux. This simple
model represents idealised dry convection in the atmospheric boundary layer, where
the cooling mimics the radiative cooling to space notably through longwave radiation.
We perform linear stability analysis of the model for different values of the
mean stratification to derive the critical forcing above which the fluid is convectively
unstable to small perturbations. The dynamic behavior of the fluid system is described
and the scaling of various important measured quantities such as the total vertical
convective heat flux and the upward mass flux is measured. We introduce a lapse-rate
dependent dimensionless Rayleigh-number Ray that determines the behavior of the
system, finding that the convective heat-flux and mass-flux scale approximately
as Ray0.5 and Ray0.7 respectively. The area-fraction of the domain that is occupied
by upward and downward moving fluid and the skewness of the vertical velocity
are studied to understand the asymmetry inherent in the system. We conclude with
a short discussion on the relevance to atmospheric convection and the scope for
further investigations of atmospheric convection using similar simplified approaches.
acknowledged_ssus:
- _id: ScienComp
acknowledgement: This project has received funding from the European Union’s Horizon
2020 research and innovation programme under the Marie Sklodowska–Curie grant agreement
No. 101034413. CM gratefully acknowledges funding from the European Research Council
(ERC) under the European Union’s Horizon 2020 research and innovation program (Project
CLUSTER, Grant Agreement No. 805041). This research was supported by the Scientific
Service Units (SSU) of IST Austria through resources provided by Scientific Computing
(SciComp).
article_number: '108011'
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Lokahith N
full_name: Agasthya, Lokahith N
id: cd100965-0804-11ed-9c55-f4878ff4e877
last_name: Agasthya
- first_name: Caroline J
full_name: Muller, Caroline J
id: f978ccb0-3f7f-11eb-b193-b0e2bd13182b
last_name: Muller
orcid: 0000-0001-5836-5350
citation:
ama: Agasthya LN, Muller CJ. Dynamics and scaling of internally cooled convection.
Communications in Nonlinear Science and Numerical Simulation. 2024;134.
doi:10.1016/j.cnsns.2024.108011
apa: Agasthya, L. N., & Muller, C. J. (2024). Dynamics and scaling of internally
cooled convection. Communications in Nonlinear Science and Numerical Simulation.
Elsevier. https://doi.org/10.1016/j.cnsns.2024.108011
chicago: Agasthya, Lokahith N, and Caroline J Muller. “Dynamics and Scaling of Internally
Cooled Convection.” Communications in Nonlinear Science and Numerical Simulation.
Elsevier, 2024. https://doi.org/10.1016/j.cnsns.2024.108011.
ieee: L. N. Agasthya and C. J. Muller, “Dynamics and scaling of internally cooled
convection,” Communications in Nonlinear Science and Numerical Simulation,
vol. 134. Elsevier, 2024.
ista: Agasthya LN, Muller CJ. 2024. Dynamics and scaling of internally cooled convection.
Communications in Nonlinear Science and Numerical Simulation. 134, 108011.
mla: Agasthya, Lokahith N., and Caroline J. Muller. “Dynamics and Scaling of Internally
Cooled Convection.” Communications in Nonlinear Science and Numerical Simulation,
vol. 134, 108011, Elsevier, 2024, doi:10.1016/j.cnsns.2024.108011.
short: L.N. Agasthya, C.J. Muller, Communications in Nonlinear Science and Numerical
Simulation 134 (2024).
corr_author: '1'
date_created: 2024-04-14T22:01:01Z
date_published: 2024-07-01T00:00:00Z
date_updated: 2025-09-04T13:37:48Z
day: '01'
ddc:
- '550'
department:
- _id: CaMu
doi: 10.1016/j.cnsns.2024.108011
ec_funded: 1
external_id:
arxiv:
- '2311.04114'
isi:
- '001238294600001'
file:
- access_level: open_access
checksum: 9b7c2b8281d0b7bc7f08e0468168324c
content_type: application/pdf
creator: dernst
date_created: 2025-01-09T09:05:31Z
date_updated: 2025-01-09T09:05:31Z
file_id: '18795'
file_name: 2024_CommNonlinear_Agasthya.pdf
file_size: 1257925
relation: main_file
success: 1
file_date_updated: 2025-01-09T09:05:31Z
has_accepted_license: '1'
intvolume: ' 134'
isi: 1
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
project:
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
call_identifier: H2020
grant_number: '101034413'
name: 'IST-BRIDGE: International postdoctoral program'
- _id: 629205d8-2b32-11ec-9570-e1356ff73576
call_identifier: H2020
grant_number: '805041'
name: Organization of CLoUdS, and implications of Tropical cyclones and for the
Energetics of the tropics, in current and waRming climate
publication: Communications in Nonlinear Science and Numerical Simulation
publication_identifier:
issn:
- 1007-5704
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Dynamics and scaling of internally cooled convection
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 134
year: '2024'
...
---
_id: '15314'
abstract:
- lang: eng
text: Development of electroactive materials exhibiting high performance with superior
stability is crucial in the field of supercapacitors and battery research. We
report on synthesis of highly stable composite of semi-polycrystalline polyaniline
and graphene (SPani-graphene) and its application in supercapacitor electrodes.
The electrochemical behavior and device performance of the electrodes were investigated
through cyclic voltammetry (CV), galvanostatic charge-discharge GCD) and electrochemical
impedance spectroscopy (EIS) in a 3-electrode and a 2-electrode (device) cell
configurations, repectively. The cell specific capacitance (Cell Csp) achieved
from the 2-electrode symmetric cell configuration was 525.5 F g−1 at 0.1 A g−1
using polymer gel electrolyte (PGE). The PGE in this work is xanthan gum jellied
in 1 M aq. Na2SO4. The maximum energy density and power density achieved from
the device was 46.7 Wh kg−1 and 16.16 kW kg−1, respectively, at 0.4 A g−1. Furthermore,
the device exhibits an excellent retention of cell specific capacitance and coulombic
efficiency of 97 % and 94 %, respectively, over 10,000 continuous GCD cycles,
indicating an excellent rate capability as well as a promising power management.
To investigate the material's electrochemical durability, a detailed EIS study
has been carried out using both, 3-electrode, and 2-electrode cell configurations,
before and after long cycling test (over 10,000 continuous GCD cycles). Our thorough
experimentation delivers satisfactory results and has been explained in detail
in the manuscript. Hereby, we propose that the EIS technique can be adopted for
investigating materials' electrochemical stability, in addition to long CV and
GCD cycles in the field of supercapacitors and battery research.
acknowledgement: "This work was supported by Korea Institute of Energy Technology
Evaluation and Planning (KETEP); and Ministry of Trade, Industry & Energy (MOTIE),
Republic of Korea (Grant No. \r\n20210501010020)."
article_number: '111464'
article_processing_charge: No
article_type: original
author:
- first_name: Neelima
full_name: Mahato, Neelima
last_name: Mahato
- first_name: Saurabh
full_name: Singh, Saurabh
id: 12d625da-9cb3-11ed-9667-af09d37d3f0a
last_name: Singh
orcid: 0000-0003-2209-5269
- first_name: T. V.M.
full_name: Sreekanth, T. V.M.
last_name: Sreekanth
- first_name: Kisoo
full_name: Yoo, Kisoo
last_name: Yoo
- first_name: Jonghoon
full_name: Kim, Jonghoon
last_name: Kim
citation:
ama: 'Mahato N, Singh S, Sreekanth TVM, Yoo K, Kim J. Polycrystalline phases engineered
in-situ in polyaniline-graphene composite evoluting an exceptional stability and
high charge storage capacity: An EIS investigative approach to evaluate material’s
stability. Journal of Energy Storage. 2024;88. doi:10.1016/j.est.2024.111464'
apa: 'Mahato, N., Singh, S., Sreekanth, T. V. M., Yoo, K., & Kim, J. (2024).
Polycrystalline phases engineered in-situ in polyaniline-graphene composite evoluting
an exceptional stability and high charge storage capacity: An EIS investigative
approach to evaluate material’s stability. Journal of Energy Storage. Elsevier.
https://doi.org/10.1016/j.est.2024.111464'
chicago: 'Mahato, Neelima, Saurabh Singh, T. V.M. Sreekanth, Kisoo Yoo, and Jonghoon
Kim. “Polycrystalline Phases Engineered In-Situ in Polyaniline-Graphene Composite
Evoluting an Exceptional Stability and High Charge Storage Capacity: An EIS Investigative
Approach to Evaluate Material’s Stability.” Journal of Energy Storage.
Elsevier, 2024. https://doi.org/10.1016/j.est.2024.111464.'
ieee: 'N. Mahato, S. Singh, T. V. M. Sreekanth, K. Yoo, and J. Kim, “Polycrystalline
phases engineered in-situ in polyaniline-graphene composite evoluting an exceptional
stability and high charge storage capacity: An EIS investigative approach to evaluate
material’s stability,” Journal of Energy Storage, vol. 88. Elsevier, 2024.'
ista: 'Mahato N, Singh S, Sreekanth TVM, Yoo K, Kim J. 2024. Polycrystalline phases
engineered in-situ in polyaniline-graphene composite evoluting an exceptional
stability and high charge storage capacity: An EIS investigative approach to evaluate
material’s stability. Journal of Energy Storage. 88, 111464.'
mla: 'Mahato, Neelima, et al. “Polycrystalline Phases Engineered In-Situ in Polyaniline-Graphene
Composite Evoluting an Exceptional Stability and High Charge Storage Capacity:
An EIS Investigative Approach to Evaluate Material’s Stability.” Journal of
Energy Storage, vol. 88, 111464, Elsevier, 2024, doi:10.1016/j.est.2024.111464.'
short: N. Mahato, S. Singh, T.V.M. Sreekanth, K. Yoo, J. Kim, Journal of Energy
Storage 88 (2024).
date_created: 2024-04-14T22:01:01Z
date_published: 2024-05-30T00:00:00Z
date_updated: 2025-09-04T13:38:27Z
day: '30'
department:
- _id: MaIb
doi: 10.1016/j.est.2024.111464
external_id:
isi:
- '001287584100001'
intvolume: ' 88'
isi: 1
language:
- iso: eng
month: '05'
oa_version: None
publication: Journal of Energy Storage
publication_identifier:
eissn:
- 2352-152X
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Polycrystalline phases engineered in-situ in polyaniline-graphene composite
evoluting an exceptional stability and high charge storage capacity: An EIS investigative
approach to evaluate material''s stability'
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 88
year: '2024'
...
---
_id: '15315'
abstract:
- lang: eng
text: Single and collective cell migration are fundamental processes critical for
physiological phenomena ranging from embryonic development and immune response
to wound healing and cancer metastasis. To understand cell migration from a physical
perspective, a broad variety of models for the underlying physical mechanisms
that govern cell motility have been developed. A key challenge in the development
of such models is how to connect them to experimental observations, which often
exhibit complex stochastic behaviours. In this review, we discuss recent advances
in data-driven theoretical approaches that directly connect with experimental
data to infer dynamical models of stochastic cell migration. Leveraging advances
in nanofabrication, image analysis, and tracking technology, experimental studies
now provide unprecedented large datasets on cellular dynamics. In parallel, theoretical
efforts have been directed towards integrating such datasets into physical models
from the single cell to the tissue scale with the aim of conceptualising the emergent
behaviour of cells. We first review how this inference problem has been addressed
in both freely migrating and confined cells. Next, we discuss why these dynamics
typically take the form of underdamped stochastic equations of motion, and how
such equations can be inferred from data. We then review applications of data-driven
inference and machine learning approaches to heterogeneity in cell behaviour,
subcellular degrees of freedom, and to the collective dynamics of multicellular
systems. Across these applications, we emphasise how data-driven methods can be
integrated with physical active matter models of migrating cells, and help reveal
how underlying molecular mechanisms control cell behaviour. Together, these data-driven
approaches are a promising avenue for building physical models of cell migration
directly from experimental data, and for providing conceptual links between different
length-scales of description.
acknowledgement: This work was supported by the Deutsche Forschungsgemeinschaft (German
Research Foundation)—Project-ID 201269156—SFB 1032 (Project B12). D B B was supported
by an NOMIS Fellowship and an EMBO Fellowship (ALTF 343-2022). We thank Joachim
Rädler, Alexandra Fink, Erwin Frey, Pierre Ronceray, Ricard Alert, Edouard Hannezo,
Henrik Flyvbjerg, Ulrich Schwarz, Joshua Shaevitz, Greg Stephens, Andrea Cavagna,
Grzegorz Gradziuk, Fridtjof Brauns, Nikolas Claussen, Tom Brandstätter, Johannes
Flommersfeld, Christoph Schreiber, Nicolas Arlt, Matthew Schmitt, Joris Messelink,
Federico Gnesotto, Federica Mura, Bram Hoogland, Manon Wigbers, Isabella Graf, Jessica
Lober, and many others for inspiring discussions. We also thank Claudia Flandoli
for the artwork in figures 1, 5, 8 and 9.
article_number: '056601'
article_processing_charge: Yes (in subscription journal)
article_type: review
arxiv: 1
author:
- first_name: David
full_name: Brückner, David
id: e1e86031-6537-11eb-953a-f7ab92be508d
last_name: Brückner
orcid: 0000-0001-7205-2975
- first_name: Chase P.
full_name: Broedersz, Chase P.
last_name: Broedersz
citation:
ama: 'Brückner D, Broedersz CP. Learning dynamical models of single and collective
cell migration: a review. Reports on Progress in Physics. 2024;87(5). doi:10.1088/1361-6633/ad36d2'
apa: 'Brückner, D., & Broedersz, C. P. (2024). Learning dynamical models of
single and collective cell migration: a review. Reports on Progress in Physics.
IOP Publishing. https://doi.org/10.1088/1361-6633/ad36d2'
chicago: 'Brückner, David, and Chase P. Broedersz. “Learning Dynamical Models of
Single and Collective Cell Migration: A Review.” Reports on Progress in Physics.
IOP Publishing, 2024. https://doi.org/10.1088/1361-6633/ad36d2.'
ieee: 'D. Brückner and C. P. Broedersz, “Learning dynamical models of single and
collective cell migration: a review,” Reports on Progress in Physics, vol.
87, no. 5. IOP Publishing, 2024.'
ista: 'Brückner D, Broedersz CP. 2024. Learning dynamical models of single and collective
cell migration: a review. Reports on Progress in Physics. 87(5), 056601.'
mla: 'Brückner, David, and Chase P. Broedersz. “Learning Dynamical Models of Single
and Collective Cell Migration: A Review.” Reports on Progress in Physics,
vol. 87, no. 5, 056601, IOP Publishing, 2024, doi:10.1088/1361-6633/ad36d2.'
short: D. Brückner, C.P. Broedersz, Reports on Progress in Physics 87 (2024).
corr_author: '1'
date_created: 2024-04-14T22:01:01Z
date_published: 2024-04-04T00:00:00Z
date_updated: 2025-09-04T13:39:07Z
day: '04'
ddc:
- '530'
department:
- _id: EdHa
doi: 10.1088/1361-6633/ad36d2
external_id:
arxiv:
- '2309.00545'
isi:
- '001196692400001'
pmid:
- '38518358'
file:
- access_level: open_access
checksum: c5910078230ade20f4dd83592e862a72
content_type: application/pdf
creator: dernst
date_created: 2024-08-20T11:00:03Z
date_updated: 2024-08-20T11:00:03Z
file_id: '17451'
file_name: 2024_ReportPhysics_Brueckner.pdf
file_size: 4376898
relation: main_file
success: 1
file_date_updated: 2024-08-20T11:00:03Z
has_accepted_license: '1'
intvolume: ' 87'
isi: 1
issue: '5'
language:
- iso: eng
license: https://creativecommons.org/licenses/by/3.0/
month: '04'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 34e2a5b5-11ca-11ed-8bc3-b2265616ef0b
grant_number: ALTF 343-2022
name: A mechano-chemical theory for stem cell fate decisions in organoid development
publication: Reports on Progress in Physics
publication_identifier:
eissn:
- 1361-6633
issn:
- 0034-4885
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Learning dynamical models of single and collective cell migration: a review'
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/3.0/legalcode
name: Creative Commons Attribution 3.0 Unported (CC BY 3.0)
short: CC BY (3.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 87
year: '2024'
...
---
OA_place: repository
OA_type: green
_id: '15316'
abstract:
- lang: eng
text: Genomic DNA that resides in the nuclei of mammalian neurons can be as old
as the organism itself. The life span of nuclear RNAs, which are critical for
proper chromatin architecture and transcription regulation, has not been determined
in adult tissues. In this work, we identified and characterized nuclear RNAs that
do not turn over for at least 2 years in a subset of postnatally born cells in
the mouse brain. These long-lived RNAs were stably retained in nuclei in a neural
cell type–specific manner and were required for the maintenance of heterochromatin.
Thus, the life span of neural cells may depend on both the molecular longevity
of DNA for the storage of genetic information and also the extreme stability of
RNA for the functional organization of chromatin.
acknowledgement: 'European Research Council: ERC-2018-STG, 804468 EAGER; European
Research Council: ERC-2023-COG, 101125034 NEUTIME; Deutsche Forschungsgemeinschaft:
TO1347/4-1; Boehringer Ingelheim Stiftung; Deutsches Zentrum für Neurodegenerative
Erkrankungen'
article_processing_charge: No
article_type: original
author:
- first_name: Sara
full_name: Zocher, Sara
last_name: Zocher
- first_name: Asako
full_name: Mccloskey, Asako
last_name: Mccloskey
- first_name: Anne
full_name: Karasinsky, Anne
last_name: Karasinsky
- first_name: Roberta
full_name: Schulte, Roberta
last_name: Schulte
- first_name: Ulrike
full_name: Friedrich, Ulrike
last_name: Friedrich
- first_name: Mathias
full_name: Lesche, Mathias
last_name: Lesche
- first_name: Nicole
full_name: Rund, Nicole
last_name: Rund
- first_name: Fred H.
full_name: Gage, Fred H.
last_name: Gage
- first_name: Martin W
full_name: Hetzer, Martin W
id: 86c0d31b-b4eb-11ec-ac5a-eae7b2e135ed
last_name: Hetzer
orcid: 0000-0002-2111-992X
- first_name: Tomohisa
full_name: Toda, Tomohisa
last_name: Toda
citation:
ama: Zocher S, Mccloskey A, Karasinsky A, et al. Lifelong persistence of nuclear
RNAs in the mouse brain. Science. 2024;384(6691):53-59. doi:10.1126/science.adf3481
apa: Zocher, S., Mccloskey, A., Karasinsky, A., Schulte, R., Friedrich, U., Lesche,
M., … Toda, T. (2024). Lifelong persistence of nuclear RNAs in the mouse brain.
Science. AAAS. https://doi.org/10.1126/science.adf3481
chicago: Zocher, Sara, Asako Mccloskey, Anne Karasinsky, Roberta Schulte, Ulrike
Friedrich, Mathias Lesche, Nicole Rund, Fred H. Gage, Martin Hetzer, and Tomohisa
Toda. “Lifelong Persistence of Nuclear RNAs in the Mouse Brain.” Science.
AAAS, 2024. https://doi.org/10.1126/science.adf3481.
ieee: S. Zocher et al., “Lifelong persistence of nuclear RNAs in the mouse
brain,” Science, vol. 384, no. 6691. AAAS, pp. 53–59, 2024.
ista: Zocher S, Mccloskey A, Karasinsky A, Schulte R, Friedrich U, Lesche M, Rund
N, Gage FH, Hetzer M, Toda T. 2024. Lifelong persistence of nuclear RNAs in the
mouse brain. Science. 384(6691), 53–59.
mla: Zocher, Sara, et al. “Lifelong Persistence of Nuclear RNAs in the Mouse Brain.”
Science, vol. 384, no. 6691, AAAS, 2024, pp. 53–59, doi:10.1126/science.adf3481.
short: S. Zocher, A. Mccloskey, A. Karasinsky, R. Schulte, U. Friedrich, M. Lesche,
N. Rund, F.H. Gage, M. Hetzer, T. Toda, Science 384 (2024) 53–59.
corr_author: '1'
date_created: 2024-04-14T22:01:01Z
date_published: 2024-04-04T00:00:00Z
date_updated: 2025-09-04T13:39:58Z
day: '04'
department:
- _id: MaHe
doi: 10.1126/science.adf3481
external_id:
isi:
- '001253335100031'
pmid:
- '38574132'
intvolume: ' 384'
isi: 1
issue: '6691'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7615865
month: '04'
oa: 1
oa_version: Submitted Version
page: 53-59
pmid: 1
publication: Science
publication_identifier:
eissn:
- 1095-9203
issn:
- 0036-8075
publication_status: published
publisher: AAAS
quality_controlled: '1'
related_material:
link:
- description: News on ISTA website
relation: press_release
url: https://ista.ac.at/en/news/nerve-cells-old-at-heart/
scopus_import: '1'
status: public
title: Lifelong persistence of nuclear RNAs in the mouse brain
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 384
year: '2024'
...
---
_id: '15317'
abstract:
- lang: eng
text: 'We consider the open symmetric exclusion (SEP) and inclusion (SIP) processes
on a bounded Lipschitz domain Ω, with both fast and slow boundary. For the random
walks on Ω dual to SEP/SIP we establish: a functional-CLT-type convergence to
the Brownian motion on Ω with either Neumann (slow boundary), Dirichlet (fast
boundary), or Robin (at criticality) boundary conditions; the discrete-to-continuum
convergence of the corresponding harmonic profiles. As a consequence, we rigorously
derive the hydrodynamic and hydrostatic limits for SEP/SIP on Ω, and analyze their
stationary nonequilibrium fluctuations. All scaling limit results for SEP/SIP
concern finite-dimensional distribution convergence only, as our duality techniques
do not require to establish tightness for the fields associated to the particle
systems.'
acknowledgement: "The first author gratefully acknowledges funding by the Austrian
Science Fund (FWF) grant F65, by the European Research Council (ERC, grant agreement
No 716117, awarded to Prof. Dr. Jan Maas). He also gratefully acknowledges funding
of his current position by the Austrian Science Fund (FWF) grant ESPRIT 208.\r\nThe
second author gratefully acknowledges funding by the Hausdorff Center for Mathematics
at the University of Bonn. Part of this work was completed while this author was
a member of the Institute of Science and Technology Austria. He gratefully acknowledges
funding of his position at that time by the Austrian Science Fund (FWF) grants F65
and W1245.\r\nThe third author gratefully acknowledges funding by the Lise Meitner
fellowship, Austrian Science Fund (FWF): M3211. Part of this work was completed
while funded by the European Union’s Horizon 2020 research and innovation programme
under the Marie-Skłodowska-Curie grant agreement No. 754411."
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Lorenzo
full_name: Dello Schiavo, Lorenzo
id: ECEBF480-9E4F-11EA-B557-B0823DDC885E
last_name: Dello Schiavo
orcid: 0000-0002-9881-6870
- first_name: Lorenzo
full_name: Portinale, Lorenzo
id: 30AD2CBC-F248-11E8-B48F-1D18A9856A87
last_name: Portinale
- first_name: Federico
full_name: Sau, Federico
id: E1836206-9F16-11E9-8814-AEFDE5697425
last_name: Sau
citation:
ama: Dello Schiavo L, Portinale L, Sau F. Scaling limits of random walks, harmonic
profiles, and stationary nonequilibrium states in Lipschitz domains. Annals
of Applied Probability. 2024;34(2):1789-1845. doi:10.1214/23-AAP2007
apa: Dello Schiavo, L., Portinale, L., & Sau, F. (2024). Scaling limits of random
walks, harmonic profiles, and stationary nonequilibrium states in Lipschitz domains.
Annals of Applied Probability. Institute of Mathematical Statistics. https://doi.org/10.1214/23-AAP2007
chicago: Dello Schiavo, Lorenzo, Lorenzo Portinale, and Federico Sau. “Scaling Limits
of Random Walks, Harmonic Profiles, and Stationary Nonequilibrium States in Lipschitz
Domains.” Annals of Applied Probability. Institute of Mathematical Statistics,
2024. https://doi.org/10.1214/23-AAP2007.
ieee: L. Dello Schiavo, L. Portinale, and F. Sau, “Scaling limits of random walks,
harmonic profiles, and stationary nonequilibrium states in Lipschitz domains,”
Annals of Applied Probability, vol. 34, no. 2. Institute of Mathematical
Statistics, pp. 1789–1845, 2024.
ista: Dello Schiavo L, Portinale L, Sau F. 2024. Scaling limits of random walks,
harmonic profiles, and stationary nonequilibrium states in Lipschitz domains.
Annals of Applied Probability. 34(2), 1789–1845.
mla: Dello Schiavo, Lorenzo, et al. “Scaling Limits of Random Walks, Harmonic Profiles,
and Stationary Nonequilibrium States in Lipschitz Domains.” Annals of Applied
Probability, vol. 34, no. 2, Institute of Mathematical Statistics, 2024, pp.
1789–845, doi:10.1214/23-AAP2007.
short: L. Dello Schiavo, L. Portinale, F. Sau, Annals of Applied Probability 34
(2024) 1789–1845.
corr_author: '1'
date_created: 2024-04-14T22:01:02Z
date_published: 2024-04-01T00:00:00Z
date_updated: 2025-09-04T13:36:00Z
day: '01'
department:
- _id: JaMa
doi: 10.1214/23-AAP2007
ec_funded: 1
external_id:
arxiv:
- '2112.14196'
isi:
- '001198623200016'
intvolume: ' 34'
isi: 1
issue: '2'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.48550/arXiv.2112.14196
month: '04'
oa: 1
oa_version: Preprint
page: 1789-1845
project:
- _id: fc31cba2-9c52-11eb-aca3-ff467d239cd2
grant_number: F6504
name: Taming Complexity in Partial Differential Systems
- _id: 256E75B8-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '716117'
name: Optimal Transport and Stochastic Dynamics
- _id: 3490b268-11ca-11ed-8bc3-e0ad03f48839
grant_number: M03211
name: Reaching consensus in heterogeneous random opinion dynamics
- _id: 260C2330-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '754411'
name: ISTplus - Postdoctoral Fellowships
- _id: 34dbf174-11ca-11ed-8bc3-afe9d43d4b9c
grant_number: E208
name: Configuration Spaces over Non-Smooth Spaces
- _id: 260788DE-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: W1245
name: Dissipation and dispersion in nonlinear partial differential equations
publication: Annals of Applied Probability
publication_identifier:
issn:
- 1050-5164
publication_status: published
publisher: Institute of Mathematical Statistics
quality_controlled: '1'
scopus_import: '1'
status: public
title: Scaling limits of random walks, harmonic profiles, and stationary nonequilibrium
states in Lipschitz domains
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 34
year: '2024'
...
---
_id: '15318'
abstract:
- lang: eng
text: We consider a gas of N weakly interacting bosons in the ground state. Such
gases exhibit Bose–Einstein condensation. The binding energy is defined as the
energy it takes to remove one particle from the gas. In this article, we prove
an asymptotic expansion for the binding energy, and compute the first orders explicitly
for the homogeneous gas. Our result addresses in particular a conjecture by Nam
(Lett Math Phys 108(1):141–159, 2018), and provides an asymptotic expansion of
the ionization energy of bosonic atoms.
acknowledgement: "It is a pleasure to thank Phan Thành Nam for helpful discussions
on bosonic atoms. L.B. was supported by the German Research Foundation within the
Munich Center of Quantum Science and Technology (EXC 2111). N.L. gratefully acknowledges
support from the Swiss National Science Foundation through the NCCR SwissMap and
funding from the European Union’s Horizon 2020 research and innovation programme
under the Marie Skłodowska-Curie Grant agreement No 101024712. S.P. acknowledges
funding by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation)—Project
number 512258249.\r\nOpen Access funding enabled and organized by Projekt DEAL."
article_number: '48'
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Lea
full_name: Bossmann, Lea
id: A2E3BCBE-5FCC-11E9-AA4B-76F3E5697425
last_name: Bossmann
orcid: 0000-0002-6854-1343
- first_name: Nikolai K
full_name: Leopold, Nikolai K
id: 4BC40BEC-F248-11E8-B48F-1D18A9856A87
last_name: Leopold
orcid: 0000-0002-0495-6822
- first_name: David Johannes
full_name: Mitrouskas, David Johannes
id: cbddacee-2b11-11eb-a02e-a2e14d04e52d
last_name: Mitrouskas
- first_name: Sören P
full_name: Petrat, Sören P
id: 40AC02DC-F248-11E8-B48F-1D18A9856A87
last_name: Petrat
orcid: 0000-0002-9166-5889
citation:
ama: Bossmann L, Leopold NK, Mitrouskas DJ, Petrat SP. A note on the binding energy
for Bosons in the mean-field limit. Journal of Statistical Physics. 2024;191(4).
doi:10.1007/s10955-024-03260-5
apa: Bossmann, L., Leopold, N. K., Mitrouskas, D. J., & Petrat, S. P. (2024).
A note on the binding energy for Bosons in the mean-field limit. Journal of
Statistical Physics. Springer Nature. https://doi.org/10.1007/s10955-024-03260-5
chicago: Bossmann, Lea, Nikolai K Leopold, David Johannes Mitrouskas, and Sören
P Petrat. “A Note on the Binding Energy for Bosons in the Mean-Field Limit.” Journal
of Statistical Physics. Springer Nature, 2024. https://doi.org/10.1007/s10955-024-03260-5.
ieee: L. Bossmann, N. K. Leopold, D. J. Mitrouskas, and S. P. Petrat, “A note on
the binding energy for Bosons in the mean-field limit,” Journal of Statistical
Physics, vol. 191, no. 4. Springer Nature, 2024.
ista: Bossmann L, Leopold NK, Mitrouskas DJ, Petrat SP. 2024. A note on the binding
energy for Bosons in the mean-field limit. Journal of Statistical Physics. 191(4),
48.
mla: Bossmann, Lea, et al. “A Note on the Binding Energy for Bosons in the Mean-Field
Limit.” Journal of Statistical Physics, vol. 191, no. 4, 48, Springer Nature,
2024, doi:10.1007/s10955-024-03260-5.
short: L. Bossmann, N.K. Leopold, D.J. Mitrouskas, S.P. Petrat, Journal of Statistical
Physics 191 (2024).
date_created: 2024-04-14T22:01:02Z
date_published: 2024-04-06T00:00:00Z
date_updated: 2025-09-04T13:36:49Z
day: '06'
ddc:
- '510'
department:
- _id: RoSe
doi: 10.1007/s10955-024-03260-5
external_id:
arxiv:
- '2307.13115'
isi:
- '001197663100002'
file:
- access_level: open_access
checksum: 839242a9ec1c01158112de25f196e60d
content_type: application/pdf
creator: dernst
date_created: 2024-04-16T11:09:37Z
date_updated: 2024-04-16T11:09:37Z
file_id: '15325'
file_name: 2024_JourStatPhysics_Bossmann.pdf
file_size: 398665
relation: main_file
success: 1
file_date_updated: 2024-04-16T11:09:37Z
has_accepted_license: '1'
intvolume: ' 191'
isi: 1
issue: '4'
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
publication: Journal of Statistical Physics
publication_identifier:
eissn:
- 1572-9613
issn:
- 0022-4715
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: A note on the binding energy for Bosons in the mean-field limit
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 191
year: '2024'
...
---
_id: '15319'
abstract:
- lang: eng
text: Exocyst component of 70-kDa (EXO70) proteins are constituents of the exocyst
complex implicated in vesicle tethering during exocytosis. MILDEW RESISTANCE LOCUS
O (MLO) proteins are plant-specific calcium channels and some MLO isoforms enable
fungal powdery mildew pathogenesis. We here detected an unexpected phenotypic
overlap of Arabidopsis thaliana exo70H4 and mlo2 mlo6 mlo12 triple mutant plants
regarding the biogenesis of leaf trichome secondary cell walls. Biochemical and
Fourier transform infrared spectroscopic analyses corroborated deficiencies in
the composition of trichome cell walls in these mutants. Transgenic lines expressing
fluorophore-tagged EXO70H4 and MLO exhibited extensive colocalization of these
proteins. Furthermore, mCherry-EXO70H4 mislocalized in trichomes of the mlo triple
mutant and, vice versa, MLO6-GFP mislocalized in trichomes of the exo70H4 mutant.
Expression of GFP-marked PMR4 callose synthase, a known cargo of EXO70H4-dependent
exocytosis, revealed reduced cell wall delivery of GFP-PMR4 in trichomes of mlo
triple mutant plants. In vivo protein–protein interaction assays in plant and
yeast cells uncovered isoform-preferential interactions between EXO70.2 subfamily
members and MLO proteins. Finally, exo70H4 and mlo6 mutants, when combined, showed
synergistically enhanced resistance to powdery mildew attack. Taken together,
our data point to an isoform-specific interplay of EXO70 and MLO proteins in the
modulation of trichome cell wall biogenesis and powdery mildew susceptibility.
article_processing_charge: Yes (in subscription journal)
article_type: original
author:
- first_name: Jan W.
full_name: Huebbers, Jan W.
last_name: Huebbers
- first_name: George A.
full_name: Caldarescu, George A.
last_name: Caldarescu
- first_name: Zdeňka
full_name: Kubátová, Zdeňka
last_name: Kubátová
- first_name: Peter
full_name: Sabol, Peter
last_name: Sabol
- first_name: Sophie C.J.
full_name: Levecque, Sophie C.J.
last_name: Levecque
- first_name: Hannah
full_name: Kuhn, Hannah
last_name: Kuhn
- first_name: Ivan
full_name: Kulich, Ivan
id: 57a1567c-8314-11eb-9063-c9ddc3451a54
last_name: Kulich
- first_name: Anja
full_name: Reinstädler, Anja
last_name: Reinstädler
- first_name: Kim
full_name: Büttgen, Kim
last_name: Büttgen
- first_name: Alba
full_name: Manga-Robles, Alba
last_name: Manga-Robles
- first_name: Hugo
full_name: Mélida, Hugo
last_name: Mélida
- first_name: Markus
full_name: Pauly, Markus
last_name: Pauly
- first_name: Ralph
full_name: Panstruga, Ralph
last_name: Panstruga
- first_name: Viktor
full_name: Žárský, Viktor
last_name: Žárský
citation:
ama: Huebbers JW, Caldarescu GA, Kubátová Z, et al. Interplay of EXO70 and MLO proteins
modulates trichome cell wall composition and susceptibility to powdery mildew.
Plant Cell. 2024;36(4):1007-1035. doi:10.1093/plcell/koad319
apa: Huebbers, J. W., Caldarescu, G. A., Kubátová, Z., Sabol, P., Levecque, S. C.
J., Kuhn, H., … Žárský, V. (2024). Interplay of EXO70 and MLO proteins modulates
trichome cell wall composition and susceptibility to powdery mildew. Plant
Cell. Oxford University Press. https://doi.org/10.1093/plcell/koad319
chicago: Huebbers, Jan W., George A. Caldarescu, Zdeňka Kubátová, Peter Sabol, Sophie
C.J. Levecque, Hannah Kuhn, Ivan Kulich, et al. “Interplay of EXO70 and MLO Proteins
Modulates Trichome Cell Wall Composition and Susceptibility to Powdery Mildew.”
Plant Cell. Oxford University Press, 2024. https://doi.org/10.1093/plcell/koad319.
ieee: J. W. Huebbers et al., “Interplay of EXO70 and MLO proteins modulates
trichome cell wall composition and susceptibility to powdery mildew,” Plant
Cell, vol. 36, no. 4. Oxford University Press, pp. 1007–1035, 2024.
ista: Huebbers JW, Caldarescu GA, Kubátová Z, Sabol P, Levecque SCJ, Kuhn H, Kulich
I, Reinstädler A, Büttgen K, Manga-Robles A, Mélida H, Pauly M, Panstruga R, Žárský
V. 2024. Interplay of EXO70 and MLO proteins modulates trichome cell wall composition
and susceptibility to powdery mildew. Plant Cell. 36(4), 1007–1035.
mla: Huebbers, Jan W., et al. “Interplay of EXO70 and MLO Proteins Modulates Trichome
Cell Wall Composition and Susceptibility to Powdery Mildew.” Plant Cell,
vol. 36, no. 4, Oxford University Press, 2024, pp. 1007–35, doi:10.1093/plcell/koad319.
short: J.W. Huebbers, G.A. Caldarescu, Z. Kubátová, P. Sabol, S.C.J. Levecque, H.
Kuhn, I. Kulich, A. Reinstädler, K. Büttgen, A. Manga-Robles, H. Mélida, M. Pauly,
R. Panstruga, V. Žárský, Plant Cell 36 (2024) 1007–1035.
date_created: 2024-04-14T22:01:02Z
date_published: 2024-04-01T00:00:00Z
date_updated: 2024-04-17T07:01:21Z
day: '01'
ddc:
- '580'
department:
- _id: JiFr
doi: 10.1093/plcell/koad319
external_id:
pmid:
- '38124479'
file:
- access_level: open_access
checksum: f9994d2e4748feec24c992b39871aba1
content_type: application/pdf
creator: dernst
date_created: 2024-04-17T06:57:54Z
date_updated: 2024-04-17T06:57:54Z
file_id: '15326'
file_name: 2024_PlantCell_Huebbers.pdf
file_size: 2866098
relation: main_file
success: 1
file_date_updated: 2024-04-17T06:57:54Z
has_accepted_license: '1'
intvolume: ' 36'
issue: '4'
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
page: 1007-1035
pmid: 1
publication: Plant Cell
publication_identifier:
eissn:
- 1532-298X
issn:
- 1040-4651
publication_status: published
publisher: Oxford University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Interplay of EXO70 and MLO proteins modulates trichome cell wall composition
and susceptibility to powdery mildew
tmp:
image: /images/cc_by_nc_nd.png
legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
(CC BY-NC-ND 4.0)
short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 36
year: '2024'
...
---
DOAJ_listed: '1'
_id: '15320'
abstract:
- lang: eng
text: Josephson diodes are superconducting elements that show an asymmetry in the
critical current depending on the direction of the current. Here, we theoretically
explore how an alternating current bias can tune the response of such a diode.
We show that for slow driving there is always a regime where the system can only
carry zero-voltage dc current in one direction, thus effectively behaving as an
ideal Josephson diode. Under fast driving, the diode efficiency is also tunable,
although the ideal regime cannot be reached in this case. We also investigate
the residual dissipation due to the time-dependent current bias and show that
it remains small. All our conclusions are solely based on the critical current
asymmetry of the junction, and are thus compatible with any Josephson diode.
acknowledgement: "We acknowledge support from research grants Spanish CM Talento Program
(Project No. 2022-T1/IND-24070), Spanish Ministry of Science, innovation, and Universities
through Grant No. PID2022-140552NA-I00, Swedish Research Council under Grant Agreement
No. 2020-03412, the European Research Council (ERC) under the European Union’s Horizon
2020 research and innovation programme under Grant Agreement No. 856526, Nanolund,
FWF Project with [82],\r\nand Microsoft Corporation. "
article_number: L022002
article_processing_charge: Yes
article_type: letter_note
author:
- first_name: Rubén
full_name: Seoane Souto, Rubén
last_name: Seoane Souto
- first_name: Martin
full_name: Leijnse, Martin
last_name: Leijnse
- first_name: Constantin
full_name: Schrade, Constantin
last_name: Schrade
- first_name: Marco
full_name: Valentini, Marco
id: C0BB2FAC-D767-11E9-B658-BC13E6697425
last_name: Valentini
- first_name: Georgios
full_name: Katsaros, Georgios
id: 38DB5788-F248-11E8-B48F-1D18A9856A87
last_name: Katsaros
orcid: 0000-0001-8342-202X
- first_name: Jeroen
full_name: Danon, Jeroen
last_name: Danon
citation:
ama: Seoane Souto R, Leijnse M, Schrade C, Valentini M, Katsaros G, Danon J. Tuning
the Josephson diode response with an ac current. Physical Review Research.
2024;6(2). doi:10.1103/PhysRevResearch.6.L022002
apa: Seoane Souto, R., Leijnse, M., Schrade, C., Valentini, M., Katsaros, G., &
Danon, J. (2024). Tuning the Josephson diode response with an ac current. Physical
Review Research. American Physical Society. https://doi.org/10.1103/PhysRevResearch.6.L022002
chicago: Seoane Souto, Rubén, Martin Leijnse, Constantin Schrade, Marco Valentini,
Georgios Katsaros, and Jeroen Danon. “Tuning the Josephson Diode Response with
an Ac Current.” Physical Review Research. American Physical Society, 2024.
https://doi.org/10.1103/PhysRevResearch.6.L022002.
ieee: R. Seoane Souto, M. Leijnse, C. Schrade, M. Valentini, G. Katsaros, and J.
Danon, “Tuning the Josephson diode response with an ac current,” Physical Review
Research, vol. 6, no. 2. American Physical Society, 2024.
ista: Seoane Souto R, Leijnse M, Schrade C, Valentini M, Katsaros G, Danon J. 2024.
Tuning the Josephson diode response with an ac current. Physical Review Research.
6(2), L022002.
mla: Seoane Souto, Rubén, et al. “Tuning the Josephson Diode Response with an Ac
Current.” Physical Review Research, vol. 6, no. 2, L022002, American Physical
Society, 2024, doi:10.1103/PhysRevResearch.6.L022002.
short: R. Seoane Souto, M. Leijnse, C. Schrade, M. Valentini, G. Katsaros, J. Danon,
Physical Review Research 6 (2024).
date_created: 2024-04-14T22:01:02Z
date_published: 2024-04-01T00:00:00Z
date_updated: 2025-05-14T09:31:50Z
day: '01'
ddc:
- '530'
department:
- _id: GeKa
doi: 10.1103/PhysRevResearch.6.L022002
file:
- access_level: open_access
checksum: 7b9cb3b17d89f392bd582e30d7a72a29
content_type: application/pdf
creator: dernst
date_created: 2024-04-17T07:14:53Z
date_updated: 2024-04-17T07:14:53Z
file_id: '15327'
file_name: 2024_PhysReviewResearch_Souto.pdf
file_size: 1073544
relation: main_file
success: 1
file_date_updated: 2024-04-17T07:14:53Z
has_accepted_license: '1'
intvolume: ' 6'
issue: '2'
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
publication: Physical Review Research
publication_identifier:
eissn:
- 2643-1564
publication_status: published
publisher: American Physical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Tuning the Josephson diode response with an ac current
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 6
year: '2024'
...
---
_id: '15321'
abstract:
- lang: eng
text: Boolean Networks (BNs) are widely used as a modeling formalism in several
domains, notably systems biology and computer science. A fundamental problem in
BN analysis is the enumeration of trap spaces, which are hypercubes in the state
space that cannot be escaped once entered. Several methods have been proposed
for enumerating trap spaces, however they often suffer from scalability and efficiency
issues, particularly for large and complex models. To our knowledge, the most
efficient and recent methods for the trap space enumeration all rely on Answer
Set Programming (ASP), which has been widely applied to the analysis of BNs. Motivated
by these considerations, our work proposes a new method for enumerating trap spaces
in BNs using ASP. We evaluate the method on a mix of 250+ real-world and 400+
randomly generated BNs, showing that it enables analysis of models beyond the
capabilities of existing tools (namely pyboolnet, mpbn, trappist, and trapmvn).
acknowledgement: This work was supported by Institut Carnot STAR, Marseille, France
and by the European Union’s Horizon 2020 research and innovation programme under
the Marie Skłodowska-Curie Grant Agreement No. 101034413.
article_processing_charge: No
author:
- first_name: Giang
full_name: Trinh, Giang
last_name: Trinh
- first_name: Belaid
full_name: Benhamou, Belaid
last_name: Benhamou
- first_name: Samuel
full_name: Pastva, Samuel
id: 07c5ea74-f61c-11ec-a664-aa7c5d957b2b
last_name: Pastva
orcid: 0000-0003-1993-0331
- first_name: Sylvain
full_name: Soliman, Sylvain
last_name: Soliman
citation:
ama: 'Trinh G, Benhamou B, Pastva S, Soliman S. Scalable enumeration of trap spaces
in boolean networks via answer set programming. In: Proceedings of the 38th
AAAI Conference on Artificial Intelligence. Vol 38. Association for the Advancement
of Artificial Intelligence; 2024:10714-10722. doi:10.1609/aaai.v38i9.28943'
apa: Trinh, G., Benhamou, B., Pastva, S., & Soliman, S. (2024). Scalable enumeration
of trap spaces in boolean networks via answer set programming. In Proceedings
of the 38th AAAI Conference on Artificial Intelligence (Vol. 38, pp. 10714–10722).
Association for the Advancement of Artificial Intelligence. https://doi.org/10.1609/aaai.v38i9.28943
chicago: Trinh, Giang, Belaid Benhamou, Samuel Pastva, and Sylvain Soliman. “Scalable
Enumeration of Trap Spaces in Boolean Networks via Answer Set Programming.” In
Proceedings of the 38th AAAI Conference on Artificial Intelligence, 38:10714–22.
Association for the Advancement of Artificial Intelligence, 2024. https://doi.org/10.1609/aaai.v38i9.28943.
ieee: G. Trinh, B. Benhamou, S. Pastva, and S. Soliman, “Scalable enumeration of
trap spaces in boolean networks via answer set programming,” in Proceedings
of the 38th AAAI Conference on Artificial Intelligence, 2024, vol. 38, no.
9, pp. 10714–10722.
ista: Trinh G, Benhamou B, Pastva S, Soliman S. 2024. Scalable enumeration of trap
spaces in boolean networks via answer set programming. Proceedings of the 38th
AAAI Conference on Artificial Intelligence. vol. 38, 10714–10722.
mla: Trinh, Giang, et al. “Scalable Enumeration of Trap Spaces in Boolean Networks
via Answer Set Programming.” Proceedings of the 38th AAAI Conference on Artificial
Intelligence, vol. 38, no. 9, Association for the Advancement of Artificial
Intelligence, 2024, pp. 10714–22, doi:10.1609/aaai.v38i9.28943.
short: G. Trinh, B. Benhamou, S. Pastva, S. Soliman, in:, Proceedings of the 38th
AAAI Conference on Artificial Intelligence, Association for the Advancement of
Artificial Intelligence, 2024, pp. 10714–10722.
date_created: 2024-04-14T22:01:02Z
date_published: 2024-03-25T00:00:00Z
date_updated: 2026-06-18T17:48:08Z
day: '25'
ddc:
- '000'
department:
- _id: ToHe
doi: 10.1609/aaai.v38i9.28943
ec_funded: 1
intvolume: ' 38'
issue: '9'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://amu.hal.science/hal-04523118/
month: '03'
oa: 1
oa_version: Published Version
page: 10714-10722
project:
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
call_identifier: H2020
grant_number: '101034413'
name: 'IST-BRIDGE: International postdoctoral program'
publication: Proceedings of the 38th AAAI Conference on Artificial Intelligence
publication_identifier:
eissn:
- 2374-3468
isbn:
- '1577358872'
issn:
- 2159-5399
publication_status: published
publisher: Association for the Advancement of Artificial Intelligence
quality_controlled: '1'
scopus_import: '1'
status: public
title: Scalable enumeration of trap spaces in boolean networks via answer set programming
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 38
year: '2024'
...
---
OA_place: publisher
OA_type: hybrid
_id: '15330'
abstract:
- lang: eng
text: Clathrin-mediated endocytosis (CME) is vital for the regulation of plant growth
and development by controlling plasma membrane protein composition and cargo uptake.
CME relies on the precise recruitment of regulators for vesicle maturation and
release. Homologues of components of mammalian vesicle scission are strong candidates
to be part of the scission machinery in plants, but the precise roles of these
proteins in this process are not fully understood. Here, we characterised the
roles of Plant Dynamin-Related Proteins 2 (DRP2s) and SH3-domain containing protein
2 (SH3P2), the plant homologue to Dynamins’ recruiters, like Endophilin and Amphiphysin,
in the CME by combining high-resolution imaging of endocytic events in vivo and
characterisation of the purified proteins in vitro. Although DRP2s and SH3P2 arrive
similarly late during CME and physically interact, genetic analysis of the sh3p123
triple-mutant and complementation assays with non-SH3P2-interacting DRP2 variants
suggests that SH3P2 does not directly recruit DRP2s to the site of endocytosis.
These observations imply that despite the presence of many well-conserved endocytic
components, plants have acquired a distinct mechanism for CME.
acknowledged_ssus:
- _id: EM-Fac
- _id: LifeSc
- _id: Bio
acknowledgement: "Nataliia Gnyliukh was partially funded by the European Union’s Horizon
2020 research and\r\ninnovation program (2018-2020) under the Marie Sklodowska-Curie
Grant (agreement no.\r\n665385). Taif University Researchers Supporting Project:
TURSP-HC2022/02. and Austrian\r\nScience Fund (FWF): I 6123-B.We thank Prof. Eileen
Lafer and Liping Wang for their suggestions regarding the optimisation of protein
expression and purification. We thank Prof. Sebastian Y. Bednarek for the useful
comments and constructive criticism of the project. We thank Maciek Adamowski for
providing genetic material. This research was supported by the Scientific Service
Units (SSU) of IST-Austria through resources provided by the Electron microscopy
(EMF), Lab Support Facility (LSF) (particularly Dorota Jaworska) and the Bioimaging
Facility (BIF)."
article_number: jcs.261720
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Nataliia
full_name: Gnyliukh, Nataliia
id: 390C1120-F248-11E8-B48F-1D18A9856A87
last_name: Gnyliukh
orcid: 0000-0002-2198-0509
- first_name: Alexander J
full_name: Johnson, Alexander J
id: 46A62C3A-F248-11E8-B48F-1D18A9856A87
last_name: Johnson
orcid: 0000-0002-2739-8843
- first_name: MK
full_name: Nagel, MK
last_name: Nagel
- first_name: Aline
full_name: Monzer, Aline
id: 2DB5D88C-D7B3-11E9-B8FD-7907E6697425
last_name: Monzer
- first_name: David
full_name: Babic, David
id: db566d23-f6e0-11ea-865d-e6f270e968e7
last_name: Babic
- first_name: Annamaria
full_name: Hlavata, Annamaria
id: 36062FEC-F248-11E8-B48F-1D18A9856A87
last_name: Hlavata
- first_name: SS
full_name: Alotaibi, SS
last_name: Alotaibi
- first_name: E
full_name: Isono, E
last_name: Isono
- first_name: Martin
full_name: Loose, Martin
id: 462D4284-F248-11E8-B48F-1D18A9856A87
last_name: Loose
orcid: 0000-0001-7309-9724
- first_name: Jiří
full_name: Friml, Jiří
id: 4159519E-F248-11E8-B48F-1D18A9856A87
last_name: Friml
orcid: 0000-0002-8302-7596
citation:
ama: Gnyliukh N, Johnson AJ, Nagel M, et al. Role of dynamin-related proteins 2
and SH3P2 in clathrin-mediated endocytosis in Arabidopsis thaliana. Journal
of Cell Science. 2024;137(8). doi:10.1242/jcs.261720
apa: Gnyliukh, N., Johnson, A. J., Nagel, M., Monzer, A., Babic, D., Hlavata, A.,
… Friml, J. (2024). Role of dynamin-related proteins 2 and SH3P2 in clathrin-mediated
endocytosis in Arabidopsis thaliana. Journal of Cell Science. The Company
of Biologists. https://doi.org/10.1242/jcs.261720
chicago: Gnyliukh, Nataliia, Alexander J Johnson, MK Nagel, Aline Monzer, David
Babic, Annamaria Hlavata, SS Alotaibi, E Isono, Martin Loose, and Jiří Friml.
“Role of Dynamin-Related Proteins 2 and SH3P2 in Clathrin-Mediated Endocytosis
in Arabidopsis Thaliana.” Journal of Cell Science. The Company of Biologists,
2024. https://doi.org/10.1242/jcs.261720.
ieee: N. Gnyliukh et al., “Role of dynamin-related proteins 2 and SH3P2 in
clathrin-mediated endocytosis in Arabidopsis thaliana,” Journal of Cell Science,
vol. 137, no. 8. The Company of Biologists, 2024.
ista: Gnyliukh N, Johnson AJ, Nagel M, Monzer A, Babic D, Hlavata A, Alotaibi S,
Isono E, Loose M, Friml J. 2024. Role of dynamin-related proteins 2 and SH3P2
in clathrin-mediated endocytosis in Arabidopsis thaliana. Journal of Cell Science.
137(8), jcs. 261720.
mla: Gnyliukh, Nataliia, et al. “Role of Dynamin-Related Proteins 2 and SH3P2 in
Clathrin-Mediated Endocytosis in Arabidopsis Thaliana.” Journal of Cell Science,
vol. 137, no. 8, jcs. 261720, The Company of Biologists, 2024, doi:10.1242/jcs.261720.
short: N. Gnyliukh, A.J. Johnson, M. Nagel, A. Monzer, D. Babic, A. Hlavata, S.
Alotaibi, E. Isono, M. Loose, J. Friml, Journal of Cell Science 137 (2024).
corr_author: '1'
date_created: 2024-04-19T09:54:59Z
date_published: 2024-04-01T00:00:00Z
date_updated: 2025-09-04T13:49:45Z
day: '01'
ddc:
- '570'
department:
- _id: MaLo
- _id: JiFr
- _id: CaBe
doi: 10.1242/jcs.261720
ec_funded: 1
external_id:
isi:
- '001266917100005'
pmid:
- '38506228'
file:
- access_level: open_access
checksum: 6dc023f0cc7052ad3cf0a42589d2e30f
content_type: application/pdf
creator: dernst
date_created: 2025-01-09T08:41:16Z
date_updated: 2025-01-09T08:41:16Z
file_id: '18792'
file_name: 2024_JourCellScience_Gnyliukh.pdf
file_size: 25845948
relation: main_file
success: 1
file_date_updated: 2025-01-09T08:41:16Z
has_accepted_license: '1'
intvolume: ' 137'
isi: 1
issue: '8'
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 2564DBCA-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '665385'
name: International IST Doctoral Program
- _id: bd76d395-d553-11ed-ba76-f678c14f9033
grant_number: I06123
name: Peptide receptors for auxin canalization in Arabidopsis
publication: Journal of Cell Science
publication_identifier:
eissn:
- 1477-9137
issn:
- 0021-9533
publication_status: published
publisher: The Company of Biologists
quality_controlled: '1'
related_material:
record:
- id: '14591'
relation: earlier_version
status: public
scopus_import: '1'
status: public
title: Role of dynamin-related proteins 2 and SH3P2 in clathrin-mediated endocytosis
in Arabidopsis thaliana
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 137
year: '2024'
...
---
_id: '15333'
abstract:
- lang: eng
text: BUBAAK-SpLit is a tool for dynamically splitting verification tasks into parts
that can then be analyzed in parallel. It is built on top of BUBAAK, a tool designed
for running combinations of verifiers in parallel. In contrast to BUBAAK, that
directly invokes verifiers on the inputs, BUBAAK-SpLit first starts by splitting
the input program into multiple modified versions called program splits. During
the splitting process, BUBAAK-SpLit utilizes a weak verifier (in our case symbolic
execution with a short timelimit) to analyze each generated program split. If
the weak verifier fails on a program split, we split this program split again
and start the verification process again on the generated program splits. We run
the splitting process until a predefined number of hard-to-verify program splits
is generated or a splitting limit is reached. During the main verification phase,
we run a combination of BUBAAK-LEE and SLOWBEAST in parallel on the remaining
unsolved parts of the verification task.
acknowledgement: This work was partially supported by the ERC-2020-AdG 10102009 grant.
alternative_title:
- LNCS
article_processing_charge: Yes (in subscription journal)
author:
- first_name: Marek
full_name: Chalupa, Marek
id: 87e34708-d6c6-11ec-9f5b-9391e7be2463
last_name: Chalupa
- first_name: Cedric
full_name: Richter, Cedric
last_name: Richter
citation:
ama: 'Chalupa M, Richter C. Bubaak-SpLit: Split what you cannot verify (Competition
contribution). In: 30th International Conference on Tools and Algorithms for
the Construction and Analysis of Systems. Vol 14572. Springer Nature; 2024:353–358.
doi:10.1007/978-3-031-57256-2_20'
apa: 'Chalupa, M., & Richter, C. (2024). Bubaak-SpLit: Split what you cannot
verify (Competition contribution). In 30th International Conference on Tools
and Algorithms for the Construction and Analysis of Systems (Vol. 14572, pp.
353–358). Luxembourg City, Luxembourg: Springer Nature. https://doi.org/10.1007/978-3-031-57256-2_20'
chicago: 'Chalupa, Marek, and Cedric Richter. “Bubaak-SpLit: Split What You Cannot
Verify (Competition Contribution).” In 30th International Conference on Tools
and Algorithms for the Construction and Analysis of Systems, 14572:353–358.
Springer Nature, 2024. https://doi.org/10.1007/978-3-031-57256-2_20.'
ieee: 'M. Chalupa and C. Richter, “Bubaak-SpLit: Split what you cannot verify (Competition
contribution),” in 30th International Conference on Tools and Algorithms for
the Construction and Analysis of Systems, Luxembourg City, Luxembourg, 2024,
vol. 14572, pp. 353–358.'
ista: 'Chalupa M, Richter C. 2024. Bubaak-SpLit: Split what you cannot verify (Competition
contribution). 30th International Conference on Tools and Algorithms for the Construction
and Analysis of Systems. TACAS: Tools and Algorithms for the Construction and
Analysis of Systems, LNCS, vol. 14572, 353–358.'
mla: 'Chalupa, Marek, and Cedric Richter. “Bubaak-SpLit: Split What You Cannot Verify
(Competition Contribution).” 30th International Conference on Tools and Algorithms
for the Construction and Analysis of Systems, vol. 14572, Springer Nature,
2024, pp. 353–358, doi:10.1007/978-3-031-57256-2_20.'
short: M. Chalupa, C. Richter, in:, 30th International Conference on Tools and Algorithms
for the Construction and Analysis of Systems, Springer Nature, 2024, pp. 353–358.
conference:
end_date: 2024-04-11
location: Luxembourg City, Luxembourg
name: 'TACAS: Tools and Algorithms for the Construction and Analysis of Systems'
start_date: 2024-04-06
corr_author: '1'
date_created: 2024-04-20T18:14:06Z
date_published: 2024-04-05T00:00:00Z
date_updated: 2025-09-04T13:48:25Z
day: '05'
ddc:
- '000'
department:
- _id: ToHe
doi: 10.1007/978-3-031-57256-2_20
ec_funded: 1
external_id:
isi:
- '001284187100020'
file:
- access_level: open_access
checksum: 208c855c60824bec936b8d01d0396474
content_type: application/pdf
creator: cchlebak
date_created: 2024-04-26T11:27:26Z
date_updated: 2024-04-26T11:27:26Z
file_id: '15347'
file_name: 2024_LNCS_Chalupa.pdf
file_size: 577128
relation: main_file
success: 1
file_date_updated: 2024-04-26T11:27:26Z
has_accepted_license: '1'
intvolume: ' 14572'
isi: 1
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
page: 353–358
project:
- _id: 62781420-2b32-11ec-9570-8d9b63373d4d
call_identifier: H2020
grant_number: '101020093'
name: Vigilant Algorithmic Monitoring of Software
publication: 30th International Conference on Tools and Algorithms for the Construction
and Analysis of Systems
publication_identifier:
eisbn:
- '9783031572562'
eissn:
- 1611-3349
isbn:
- '9783031572555'
issn:
- 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Bubaak-SpLit: Split what you cannot verify (Competition contribution)'
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 14572
year: '2024'
...
---
_id: '15334'
abstract:
- lang: eng
text: We consider the sharp interface limit of a Navier-Stokes/Allen Cahn equation
in a bounded smooth domain in two space dimensions, in the case of vanishing mobility
mε=ε√, where the small parameter ε>0 related to the thickness of the diffuse interface
is sent to zero. For well-prepared initial data and sufficiently small times,
we rigorously prove convergence to the classical two-phase Navier-Stokes system
with surface tension. The idea of the proof is to use asymptotic expansions to
construct an approximate solution and to estimate the difference of the exact
and approximate solutions with a spectral estimate for the (at the approximate
solution) linearized Allen-Cahn operator. In the calculations we use a fractional
order ansatz and new ansatz terms in higher orders leading to a suitable ε-scaled
and coupled model problem. Moreover, we apply the novel idea of introducing ε-dependent
coordinates.
acknowledgement: "Open Access funding enabled and organized by Projekt DEAL.\r\nM.
Fei was partially supported by NSF of China under Grant No. 12271004 and Anhui Provincial
Funding Project under Grant Nos. gxbjZD2022009 and 2308085J10. Moreover, M. Moser
has received funding from the European Research Council (ERC) under the European
Union’s Horizon 2020 research and innovation programme (Grant Agreement No 948819)."
article_number: '94'
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Helmut
full_name: Abels, Helmut
last_name: Abels
- first_name: Mingwen
full_name: Fei, Mingwen
last_name: Fei
- first_name: Maximilian
full_name: Moser, Maximilian
id: a60047a9-da77-11eb-85b4-c4dc385ebb8c
last_name: Moser
citation:
ama: Abels H, Fei M, Moser M. Sharp interface limit for a Navier–Stokes/Allen–Cahn
system in the case of a vanishing mobility. Calculus of Variations and Partial
Differential Equations. 2024;63(4). doi:10.1007/s00526-024-02715-7
apa: Abels, H., Fei, M., & Moser, M. (2024). Sharp interface limit for a Navier–Stokes/Allen–Cahn
system in the case of a vanishing mobility. Calculus of Variations and Partial
Differential Equations. Springer Nature. https://doi.org/10.1007/s00526-024-02715-7
chicago: Abels, Helmut, Mingwen Fei, and Maximilian Moser. “Sharp Interface Limit
for a Navier–Stokes/Allen–Cahn System in the Case of a Vanishing Mobility.” Calculus
of Variations and Partial Differential Equations. Springer Nature, 2024. https://doi.org/10.1007/s00526-024-02715-7.
ieee: H. Abels, M. Fei, and M. Moser, “Sharp interface limit for a Navier–Stokes/Allen–Cahn
system in the case of a vanishing mobility,” Calculus of Variations and Partial
Differential Equations, vol. 63, no. 4. Springer Nature, 2024.
ista: Abels H, Fei M, Moser M. 2024. Sharp interface limit for a Navier–Stokes/Allen–Cahn
system in the case of a vanishing mobility. Calculus of Variations and Partial
Differential Equations. 63(4), 94.
mla: Abels, Helmut, et al. “Sharp Interface Limit for a Navier–Stokes/Allen–Cahn
System in the Case of a Vanishing Mobility.” Calculus of Variations and Partial
Differential Equations, vol. 63, no. 4, 94, Springer Nature, 2024, doi:10.1007/s00526-024-02715-7.
short: H. Abels, M. Fei, M. Moser, Calculus of Variations and Partial Differential
Equations 63 (2024).
date_created: 2024-04-21T22:00:52Z
date_published: 2024-05-01T00:00:00Z
date_updated: 2025-09-04T13:45:40Z
day: '01'
ddc:
- '510'
department:
- _id: JuFi
doi: 10.1007/s00526-024-02715-7
ec_funded: 1
external_id:
arxiv:
- '2304.12096'
isi:
- '001199418100002'
file:
- access_level: open_access
checksum: b1095fad4cae596f52cc616a973bdde2
content_type: application/pdf
creator: dernst
date_created: 2024-04-23T07:30:48Z
date_updated: 2024-04-23T07:30:48Z
file_id: '15343'
file_name: 2024_CalculusEquations_Abels.pdf
file_size: 975186
relation: main_file
success: 1
file_date_updated: 2024-04-23T07:30:48Z
has_accepted_license: '1'
intvolume: ' 63'
isi: 1
issue: '4'
language:
- iso: eng
month: '05'
oa: 1
oa_version: Published Version
project:
- _id: 0aa76401-070f-11eb-9043-b5bb049fa26d
call_identifier: H2020
grant_number: '948819'
name: Bridging Scales in Random Materials
publication: Calculus of Variations and Partial Differential Equations
publication_identifier:
eissn:
- 1432-0835
issn:
- 0944-2669
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Sharp interface limit for a Navier–Stokes/Allen–Cahn system in the case of
a vanishing mobility
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 63
year: '2024'
...
---
_id: '15335'
abstract:
- lang: eng
text: Stable matching of neurotransmitters with their receptors is fundamental to
synapse function and reliable communication in neural circuits. Presynaptic neurotransmitters
regulate the stabilization of postsynaptic transmitter receptors. Whether postsynaptic
receptors regulate stabilization of presynaptic transmitters has received less
attention. Here, we show that blockade of endogenous postsynaptic acetylcholine
receptors (AChR) at the neuromuscular junction destabilizes the cholinergic phenotype
in motor neurons and stabilizes an earlier, developmentally transient glutamatergic
phenotype. Further, expression of exogenous postsynaptic gamma-aminobutyric acid
type A receptors (GABAA receptors) in muscle cells stabilizes an earlier, developmentally
transient GABAergic motor neuron phenotype. Both AChR and GABAA receptors are
linked to presynaptic neurons through transsynaptic bridges. Knockdown of specific
components of these transsynaptic bridges prevents stabilization of the cholinergic
or GABAergic phenotypes. Bidirectional communication can enforce a match between
transmitter and receptor and ensure the fidelity of synaptic transmission. Our
findings suggest a potential role of dysfunctional transmitter receptors in neurological
disorders that involve the loss of the presynaptic transmitter.
acknowledgement: We thank all members of the Spitzer laboratory for discussions and critical feedback; K. Marek for discussions of acknowledgment signals;
I. Gregor and R. Aricescu for discussions of receptor pharmacology and transsynaptic bridges; C. Kintner for advice on Xenopus blastomere lineage; A. Ray
and E. Park for guidance on miniature analysis; A. Glavis- Bloom, S.U. Choi, S.
Atkins, M. Gupta, and S. Malladi for technical assistance; and D. K. Berg and L.
R. Squire for comments on the manuscript. This work was supported by NSF 2051555
and the Overland Foundation. Microscopy for five- channel imaging utilized the UCSD
School of Medicine Microscopy Core, supported by NIH grant NS047101.
article_number: e2318041121
article_processing_charge: Yes (in subscription journal)
article_type: original
author:
- first_name: Swetha K.
full_name: Godavarthi, Swetha K.
last_name: Godavarthi
- first_name: Masaki
full_name: Hiramoto, Masaki
last_name: Hiramoto
- first_name: Yuri
full_name: Ignatyev, Yuri
last_name: Ignatyev
- first_name: Jacqueline B.
full_name: Levin, Jacqueline B.
last_name: Levin
- first_name: Hui Quan
full_name: Li, Hui Quan
last_name: Li
- first_name: Marta
full_name: Pratelli, Marta
last_name: Pratelli
- first_name: Jennifer
full_name: Borchardt, Jennifer
last_name: Borchardt
- first_name: Cynthia
full_name: Czajkowski, Cynthia
last_name: Czajkowski
- first_name: Laura N.
full_name: Borodinsky, Laura N.
last_name: Borodinsky
- first_name: Lora Beatrice Jaeger
full_name: Sweeney, Lora Beatrice Jaeger
id: 56BE8254-C4F0-11E9-8E45-0B23E6697425
last_name: Sweeney
orcid: 0000-0001-9242-5601
- first_name: Hollis T.
full_name: Cline, Hollis T.
last_name: Cline
- first_name: Nicholas C.
full_name: Spitzer, Nicholas C.
last_name: Spitzer
citation:
ama: Godavarthi SK, Hiramoto M, Ignatyev Y, et al. Postsynaptic receptors regulate
presynaptic transmitter stability through transsynaptic bridges. Proceedings
of the National Academy of Sciences of the United States of America. 2024;121(15).
doi:10.1073/pnas.2318041121
apa: Godavarthi, S. K., Hiramoto, M., Ignatyev, Y., Levin, J. B., Li, H. Q., Pratelli,
M., … Spitzer, N. C. (2024). Postsynaptic receptors regulate presynaptic transmitter
stability through transsynaptic bridges. Proceedings of the National Academy
of Sciences of the United States of America. National Academy of Sciences.
https://doi.org/10.1073/pnas.2318041121
chicago: Godavarthi, Swetha K., Masaki Hiramoto, Yuri Ignatyev, Jacqueline B. Levin,
Hui Quan Li, Marta Pratelli, Jennifer Borchardt, et al. “Postsynaptic Receptors
Regulate Presynaptic Transmitter Stability through Transsynaptic Bridges.” Proceedings
of the National Academy of Sciences of the United States of America. National
Academy of Sciences, 2024. https://doi.org/10.1073/pnas.2318041121.
ieee: S. K. Godavarthi et al., “Postsynaptic receptors regulate presynaptic
transmitter stability through transsynaptic bridges,” Proceedings of the National
Academy of Sciences of the United States of America, vol. 121, no. 15. National
Academy of Sciences, 2024.
ista: Godavarthi SK, Hiramoto M, Ignatyev Y, Levin JB, Li HQ, Pratelli M, Borchardt
J, Czajkowski C, Borodinsky LN, Sweeney LB, Cline HT, Spitzer NC. 2024. Postsynaptic
receptors regulate presynaptic transmitter stability through transsynaptic bridges.
Proceedings of the National Academy of Sciences of the United States of America.
121(15), e2318041121.
mla: Godavarthi, Swetha K., et al. “Postsynaptic Receptors Regulate Presynaptic
Transmitter Stability through Transsynaptic Bridges.” Proceedings of the National
Academy of Sciences of the United States of America, vol. 121, no. 15, e2318041121,
National Academy of Sciences, 2024, doi:10.1073/pnas.2318041121.
short: S.K. Godavarthi, M. Hiramoto, Y. Ignatyev, J.B. Levin, H.Q. Li, M. Pratelli,
J. Borchardt, C. Czajkowski, L.N. Borodinsky, L.B. Sweeney, H.T. Cline, N.C. Spitzer,
Proceedings of the National Academy of Sciences of the United States of America
121 (2024).
date_created: 2024-04-21T22:00:53Z
date_published: 2024-04-09T00:00:00Z
date_updated: 2025-09-04T13:42:01Z
day: '09'
ddc:
- '570'
department:
- _id: LoSw
doi: 10.1073/pnas.2318041121
external_id:
isi:
- '001243892800004'
pmid:
- '38568976'
file:
- access_level: open_access
checksum: f3b4ffad4ef3d1c443414edf0cd2392c
content_type: application/pdf
creator: dernst
date_created: 2024-04-23T06:53:14Z
date_updated: 2024-04-23T06:53:14Z
file_id: '15340'
file_name: 2024_PNAS_Godavarthi.pdf
file_size: 16187094
relation: main_file
success: 1
file_date_updated: 2024-04-23T06:53:14Z
has_accepted_license: '1'
intvolume: ' 121'
isi: 1
issue: '15'
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
pmid: 1
publication: Proceedings of the National Academy of Sciences of the United States
of America
publication_identifier:
eissn:
- 1091-6490
publication_status: published
publisher: National Academy of Sciences
quality_controlled: '1'
scopus_import: '1'
status: public
title: Postsynaptic receptors regulate presynaptic transmitter stability through transsynaptic
bridges
tmp:
image: /images/cc_by_nc_nd.png
legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
(CC BY-NC-ND 4.0)
short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 121
year: '2024'
...
---
_id: '15339'
abstract:
- lang: eng
text: We define even very stable Higgs bundles and study the Hitchin map restricted
to their upward flows. In the GLn case, we classify the type (1,…,1) examples,
and find that they are governed by a root system formed by the roots of even height.
We discuss how the spectrum of equivariant cohomology of real and quaternionic
Grassmannians, 4n-spheres and the real Cayley plane appear to describe the Hitchin
map on even cominuscule upward flows. The even upward flows in question are the
same as upward flows in Higgs bundle moduli spaces for quasi-split inner real
forms. The latter spaces have been pioneered by Oscar García-Prada and his collaborators.
acknowledgement: Most of the research for this paper was done when the first author
visited the second author's group at IST Austria as a summer intern in 2022. The
second author was supported by an FWF grant "Geometry of the top of the nilpotent
cone" number P35847.
article_number: '2441009'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Miguel
full_name: González, Miguel
last_name: González
- first_name: Tamás
full_name: Hausel, Tamás
id: 4A0666D8-F248-11E8-B48F-1D18A9856A87
last_name: Hausel
orcid: 0000-0002-9582-2634
citation:
ama: González M, Hausel T. Hitchin map on even very stable upward flows. International
Journal of Mathematics. 2024;35(09). doi:10.1142/S0129167X2441009X
apa: González, M., & Hausel, T. (2024). Hitchin map on even very stable upward
flows. International Journal of Mathematics. World Scientific Publishing.
https://doi.org/10.1142/S0129167X2441009X
chicago: González, Miguel, and Tamás Hausel. “Hitchin Map on Even Very Stable Upward
Flows.” International Journal of Mathematics. World Scientific Publishing,
2024. https://doi.org/10.1142/S0129167X2441009X.
ieee: M. González and T. Hausel, “Hitchin map on even very stable upward flows,”
International Journal of Mathematics, vol. 35, no. 09. World Scientific
Publishing, 2024.
ista: González M, Hausel T. 2024. Hitchin map on even very stable upward flows.
International Journal of Mathematics. 35(09), 2441009.
mla: González, Miguel, and Tamás Hausel. “Hitchin Map on Even Very Stable Upward
Flows.” International Journal of Mathematics, vol. 35, no. 09, 2441009,
World Scientific Publishing, 2024, doi:10.1142/S0129167X2441009X.
short: M. González, T. Hausel, International Journal of Mathematics 35 (2024).
date_created: 2024-04-21T22:00:54Z
date_published: 2024-04-04T00:00:00Z
date_updated: 2025-09-04T13:40:37Z
day: '04'
department:
- _id: TaHa
doi: 10.1142/S0129167X2441009X
external_id:
arxiv:
- '2303.01404'
isi:
- '001251179200003'
intvolume: ' 35'
isi: 1
issue: '09'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.48550/arXiv.2303.01404
month: '04'
oa: 1
oa_version: Preprint
project:
- _id: 34b2c9cb-11ca-11ed-8bc3-a50ba74ca4a3
grant_number: P35847
name: Geometry of the tip of the global nilpotent cone
publication: International Journal of Mathematics
publication_identifier:
eissn:
- 1793-6519
issn:
- 0129-167X
publication_status: published
publisher: World Scientific Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: Hitchin map on even very stable upward flows
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 35
year: '2024'
...
---
OA_type: closed access
_id: '15348'
abstract:
- lang: eng
text: We report on synthesis of highly crystalline polythiophene and its application
in supercapacitor electrodes. The material exhibits a remarkably stable electrochemical
behavior and an excellent device performance. The device delivers an electrode
specific capacitance (Csp) of 129.13F g−1, Cell Csp of 32.28F g−1 at 0.5 A/g;
energy, and power densities of ∼ 3 Wh kg−1 and 250 W kg -1, respectively at 0.5
A/g. Also, it exhibits an excellent retention of Cell Csp and coulombic efficiency
up to ∼ 95 % over 10,000 continuous galvanostatic charge discharge (GCD) cycles
indicating a remarkable performance by a standalone, pristine and undoped polythiophene.
Electrochemical impedance spectroscopy (EIS) studies further suggest material’s
stable capacitive behavior. The material’s enhanced electrochemical properties,
stable behavior and outstanding performance in device application are attributed
to the crystalline phases present in the polymer matrix achievable via a slow
rate of synthesis; overall, an edge over other conventional synthesis methods.
acknowledgement: This research was supported by the Korea Evaluation Institute of
Industrial Technology (No. 200116167, Development of Battery Safety Diagnosis System
(BDS) SoC that predicts the internal state, explosion risk, remaining useful life,
and replacement timing of electric vehicle batteries).
article_number: '136483'
article_processing_charge: No
article_type: original
author:
- first_name: Neelima
full_name: Mahato, Neelima
last_name: Mahato
- first_name: Saurabh
full_name: Singh, Saurabh
id: 12d625da-9cb3-11ed-9667-af09d37d3f0a
last_name: Singh
orcid: 0000-0003-2209-5269
- first_name: T. V.M.
full_name: Sreekanth, T. V.M.
last_name: Sreekanth
- first_name: Kisoo
full_name: Yoo, Kisoo
last_name: Yoo
- first_name: Jonghoon
full_name: Kim, Jonghoon
last_name: Kim
citation:
ama: 'Mahato N, Singh S, Sreekanth TVM, Yoo K, Kim J. In-situ engineered highly
crystalline polythiophene empowered electrochemical capacitor-I: Synthesis, characterization,
and electrochemical charge storage. Materials Letters. 2024;365. doi:10.1016/j.matlet.2024.136483'
apa: 'Mahato, N., Singh, S., Sreekanth, T. V. M., Yoo, K., & Kim, J. (2024).
In-situ engineered highly crystalline polythiophene empowered electrochemical
capacitor-I: Synthesis, characterization, and electrochemical charge storage.
Materials Letters. Elsevier. https://doi.org/10.1016/j.matlet.2024.136483'
chicago: 'Mahato, Neelima, Saurabh Singh, T. V.M. Sreekanth, Kisoo Yoo, and Jonghoon
Kim. “In-Situ Engineered Highly Crystalline Polythiophene Empowered Electrochemical
Capacitor-I: Synthesis, Characterization, and Electrochemical Charge Storage.”
Materials Letters. Elsevier, 2024. https://doi.org/10.1016/j.matlet.2024.136483.'
ieee: 'N. Mahato, S. Singh, T. V. M. Sreekanth, K. Yoo, and J. Kim, “In-situ engineered
highly crystalline polythiophene empowered electrochemical capacitor-I: Synthesis,
characterization, and electrochemical charge storage,” Materials Letters,
vol. 365. Elsevier, 2024.'
ista: 'Mahato N, Singh S, Sreekanth TVM, Yoo K, Kim J. 2024. In-situ engineered
highly crystalline polythiophene empowered electrochemical capacitor-I: Synthesis,
characterization, and electrochemical charge storage. Materials Letters. 365,
136483.'
mla: 'Mahato, Neelima, et al. “In-Situ Engineered Highly Crystalline Polythiophene
Empowered Electrochemical Capacitor-I: Synthesis, Characterization, and Electrochemical
Charge Storage.” Materials Letters, vol. 365, 136483, Elsevier, 2024, doi:10.1016/j.matlet.2024.136483.'
short: N. Mahato, S. Singh, T.V.M. Sreekanth, K. Yoo, J. Kim, Materials Letters
365 (2024).
corr_author: '1'
date_created: 2024-04-28T22:00:56Z
date_published: 2024-06-15T00:00:00Z
date_updated: 2025-09-04T13:49:05Z
day: '15'
department:
- _id: MaIb
doi: 10.1016/j.matlet.2024.136483
external_id:
isi:
- '001300025600001'
intvolume: ' 365'
isi: 1
language:
- iso: eng
month: '06'
oa_version: None
publication: Materials Letters
publication_identifier:
eissn:
- 1873-4979
issn:
- 0167-577X
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'In-situ engineered highly crystalline polythiophene empowered electrochemical
capacitor-I: Synthesis, characterization, and electrochemical charge storage'
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 365
year: '2024'
...
---
_id: '15350'
abstract:
- lang: eng
text: We extend three related results from the analysis of influences of Boolean
functions to the quantum setting, namely the KKL theorem, Friedgut’s Junta theorem
and Talagrand’s variance inequality for geometric influences. Our results are
derived by a joint use of recently studied hypercontractivity and gradient estimates.
These generic tools also allow us to derive generalizations of these results in
a general von Neumann algebraic setting beyond the case of the quantum hypercube,
including examples in infinite dimensions relevant to quantum information theory
such as continuous variables quantum systems. Finally, we comment on the implications
of our results as regards to noncommutative extensions of isoperimetric type inequalities,
quantum circuit complexity lower bounds and the learnability of quantum observables.
acknowledgement: "Open access funding provided by the Carolinas Consortium.\r\nH.Z.
is supported by the Lise Meitner fellowship, Austrian Science Fund (FWF) M3337.
H.Z. would like to thank the American Institute of Mathematics and the AIM workshop
Analysis on the hypercube with applications to quantum computing. He is also grateful
to the organizers and other participants for creating an active atmosphere. The
research of C.R. has been supported by ANR project QTraj (ANR-20-CE40-0024-01) of
the French National Research Agency (ANR). C.R. acknowledges the support of the
Munich Center for Quantum Sciences and Technology, as well as the Humboldt Foundation.
C.R. would like to thank Amanda Young for fruitful discussion on the applications
of Friedgut’s Junta theorem to learning quantum dynamics. The research of M.W. was
funded by the Austrian Science Fund (FWF) under the Esprit Programme [ESP 156].
For the purpose of Open Access, the authors have applied a CC BY public copyright
licence to any Author Accepted Manuscript (AAM) version arising from this submission.
The authors want to thank Francisco Escudero Gutierrez and Hsin-Yuan Huang for helpful
comments on an earlier version of the paper. They are grateful to the referees for
the careful reading and helpful comments."
article_number: '95'
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Cambyse
full_name: Rouzé, Cambyse
last_name: Rouzé
- first_name: Melchior
full_name: Wirth, Melchior
id: 88644358-0A0E-11EA-8FA5-49A33DDC885E
last_name: Wirth
orcid: 0000-0002-0519-4241
- first_name: Haonan
full_name: Zhang, Haonan
id: D8F41E38-9E66-11E9-A9E2-65C2E5697425
last_name: Zhang
citation:
ama: Rouzé C, Wirth M, Zhang H. Quantum Talagrand, KKL and Friedgut’s theorems and
the learnability of quantum boolean functions. Communications in Mathematical
Physics. 2024;405(4). doi:10.1007/s00220-024-04981-0
apa: Rouzé, C., Wirth, M., & Zhang, H. (2024). Quantum Talagrand, KKL and Friedgut’s
theorems and the learnability of quantum boolean functions. Communications
in Mathematical Physics. Springer Nature. https://doi.org/10.1007/s00220-024-04981-0
chicago: Rouzé, Cambyse, Melchior Wirth, and Haonan Zhang. “Quantum Talagrand, KKL
and Friedgut’s Theorems and the Learnability of Quantum Boolean Functions.” Communications
in Mathematical Physics. Springer Nature, 2024. https://doi.org/10.1007/s00220-024-04981-0.
ieee: C. Rouzé, M. Wirth, and H. Zhang, “Quantum Talagrand, KKL and Friedgut’s theorems
and the learnability of quantum boolean functions,” Communications in Mathematical
Physics, vol. 405, no. 4. Springer Nature, 2024.
ista: Rouzé C, Wirth M, Zhang H. 2024. Quantum Talagrand, KKL and Friedgut’s theorems
and the learnability of quantum boolean functions. Communications in Mathematical
Physics. 405(4), 95.
mla: Rouzé, Cambyse, et al. “Quantum Talagrand, KKL and Friedgut’s Theorems and
the Learnability of Quantum Boolean Functions.” Communications in Mathematical
Physics, vol. 405, no. 4, 95, Springer Nature, 2024, doi:10.1007/s00220-024-04981-0.
short: C. Rouzé, M. Wirth, H. Zhang, Communications in Mathematical Physics 405
(2024).
corr_author: '1'
date_created: 2024-04-29T08:47:28Z
date_published: 2024-04-09T00:00:00Z
date_updated: 2025-09-04T13:50:22Z
day: '09'
ddc:
- '510'
department:
- _id: JaMa
doi: 10.1007/s00220-024-04981-0
external_id:
arxiv:
- '2209.07279'
isi:
- '001199509500004'
pmid:
- '38606337'
file:
- access_level: open_access
checksum: 8ecd168755f0d40ebd7cd0b71063acfc
content_type: application/pdf
creator: dernst
date_created: 2024-05-06T06:18:45Z
date_updated: 2024-05-06T06:18:45Z
file_id: '15365'
file_name: 2024_CommMathPhysics_Rouze.pdf
file_size: 653676
relation: main_file
success: 1
file_date_updated: 2024-05-06T06:18:45Z
has_accepted_license: '1'
intvolume: ' 405'
isi: 1
issue: '4'
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: eb958bca-77a9-11ec-83b8-c565cb50d8d6
grant_number: M03337
name: Curvature-dimension in noncommutative analysis
- _id: 34c6ea2d-11ca-11ed-8bc3-c04f3c502833
grant_number: ESP156_N
name: Gradient flow techniques for quantum Markov semigroups
publication: Communications in Mathematical Physics
publication_identifier:
eissn:
- 1432-0916
issn:
- 0010-3616
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Quantum Talagrand, KKL and Friedgut’s theorems and the learnability of quantum
boolean functions
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 405
year: '2024'
...
---
OA_type: free access
_id: '15356'
abstract:
- lang: eng
text: Identifying efficient active sites for the direct synthesis of hydrogen peroxide
over Pd-based catalysts has been a subject of considerable debate. In this study,
we employ particle swarm optimization method and density functional theory to
explore the H2O2 synthesis mechanism on Pd, PdO, and the partially oxidized surface
(Pd9OX). A comprehensive mechanism for Pd9OX is elucidated, and subsequent coverage-dependent
kinetic analysis allows for a quantitative assessment of catalytic performance
at the interphase. Our findings conclusively establish that the interphase between
Pd and PdO represents the optimal active site. Phase diagram analysis further
aids in determining stable structures under reaction conditions. At 298.15 K and
under oxygen balance, the Pd9O6 surface remains stable throughout the reaction,
demonstrating high activity and selectivity. This work underscores the significance
of the interphase in comprehending catalytic performance and unveils promising
avenues for optimizing catalyst performance by controlling reaction conditions
and surface composition.
acknowledgement: The authors acknowledge the financial support from the National Key
Research and Development Project of China (2021YFA1500900, 2022YFE0113800), the
National Natural Science Foundation of China (22141001, U21A20298), Zhejiang Innovation
Team (2017R5203).
article_number: '120199'
article_processing_charge: No
article_type: original
author:
- first_name: Jinyan
full_name: Zhao, Jinyan
last_name: Zhao
- first_name: Zihao
full_name: Yao, Zihao
last_name: Yao
- first_name: Rhys
full_name: Bunting, Rhys
id: 91deeae8-1207-11ec-b130-c194ad5b50c6
last_name: Bunting
orcid: 0000-0001-6928-074X
- first_name: Yaqiu
full_name: Wang, Yaqiu
last_name: Wang
- first_name: Jianguo
full_name: Wang, Jianguo
last_name: Wang
citation:
ama: Zhao J, Yao Z, Bunting R, Wang Y, Wang J. Identifying Pd9OX as the optimum
catalyst for the direct synthesis of H2O2 through microkinetic modeling with coverage
effects. Chemical Engineering Science. 2024;295. doi:10.1016/j.ces.2024.120199
apa: Zhao, J., Yao, Z., Bunting, R., Wang, Y., & Wang, J. (2024). Identifying
Pd9OX as the optimum catalyst for the direct synthesis of H2O2 through microkinetic
modeling with coverage effects. Chemical Engineering Science. Elsevier.
https://doi.org/10.1016/j.ces.2024.120199
chicago: Zhao, Jinyan, Zihao Yao, Rhys Bunting, Yaqiu Wang, and Jianguo Wang. “Identifying
Pd9OX as the Optimum Catalyst for the Direct Synthesis of H2O2 through Microkinetic
Modeling with Coverage Effects.” Chemical Engineering Science. Elsevier,
2024. https://doi.org/10.1016/j.ces.2024.120199.
ieee: J. Zhao, Z. Yao, R. Bunting, Y. Wang, and J. Wang, “Identifying Pd9OX as the
optimum catalyst for the direct synthesis of H2O2 through microkinetic modeling
with coverage effects,” Chemical Engineering Science, vol. 295. Elsevier,
2024.
ista: Zhao J, Yao Z, Bunting R, Wang Y, Wang J. 2024. Identifying Pd9OX as the optimum
catalyst for the direct synthesis of H2O2 through microkinetic modeling with coverage
effects. Chemical Engineering Science. 295, 120199.
mla: Zhao, Jinyan, et al. “Identifying Pd9OX as the Optimum Catalyst for the Direct
Synthesis of H2O2 through Microkinetic Modeling with Coverage Effects.” Chemical
Engineering Science, vol. 295, 120199, Elsevier, 2024, doi:10.1016/j.ces.2024.120199.
short: J. Zhao, Z. Yao, R. Bunting, Y. Wang, J. Wang, Chemical Engineering Science
295 (2024).
date_created: 2024-05-05T22:01:02Z
date_published: 2024-08-05T00:00:00Z
date_updated: 2025-09-04T13:54:17Z
day: '05'
department:
- _id: MaIb
doi: 10.1016/j.ces.2024.120199
external_id:
isi:
- '001236643300001'
intvolume: ' 295'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1016/j.ces.2024.120199
month: '08'
oa: 1
oa_version: None
publication: Chemical Engineering Science
publication_identifier:
issn:
- 0009-2509
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Identifying Pd9OX as the optimum catalyst for the direct synthesis of H2O2
through microkinetic modeling with coverage effects
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 295
year: '2024'
...
---
OA_place: publisher
OA_type: hybrid
_id: '15357'
abstract:
- lang: eng
text: 'There is a growing interest in cost-effective polycrystalline SnSe-based
thermoelectric (TE) materials, which are able to replace the high performance
but mechanically fragile and costly single-crystalline SnSe. In this study, we
present a low-temperature solution-based approach to produce SnSe-PbSe nanocomposites
with outstanding TE performance. Our method involves combining surfactant-free
SnSe particles with oleate-capped PbSe nanocrystals in specific ratios, followed
by thermal annealing and consolidation using spark plasma sintering. These nanocomposites
are characterized by distinct compositional and structural properties that significantly
impact their transport properties. In particular, the addition of oleate-capped
PbSe nanocrystals results in: i) a reduction in the electrostatically adsorbed
Na at the surface of the SnSe particles; ii) a reduction of Sn vacancies due to
alloying with Pb; iii) an increase in grain boundary density; and iv) the formation
of PbSnSe secondary phases. Notably, the SnSe-2.5 %PbSe nanocomposites demonstrate
a 30 % decrease in thermal conductivity compared to that of the SnSe matrix. This
reduction contributes to a maximum figure of merit (zT) of 1.75 at 788 K with
a high average zT value of ca. 1.2 in the medium temperature range of 573–773
K. These values represent one of the highest reported in polycrystalline SnSe
materials, showcasing the potential of our fabricated SnSe-PbSe nanocomposites
for cost-effective TE applications.'
acknowledged_ssus:
- _id: EM-Fac
- _id: NMR
- _id: LifeSc
acknowledgement: 'The Scientific Service Units (SSU) of ISTA supported this research
through resources provided by the Electron Microscopy Facility (EMF), NMR Facility,
and the Lab Support Facility (LSF). Y.L., S.L., C.F., C.C. and M.I. acknowledge
financial support from ISTA and the Werner Siemens Foundation. Y.L. acknowledges
funding from the National Natural Science Foundation of China (NSFC) (Grants No.
22209034), the Innovation and Entrepreneurship Project of Overseas Returnees in
Anhui Province (Grant No. 2022LCX002). C.C. acknowledges funding from the National
Natural Science Foundation of China (NSFC) (Grants No. 12374023). ICN2 acknowledges
funding from Generalitat de Catalunya 2021SGR00457. The authors thank support from
the project NANOGEN(PID2020-116093RB-C43), funded by MCIN/ AEI/10.13039/501100011033/
and by “ERDF Away of making Europe”, by the “European Union”. ICN2 is supported
by the Severo Ochoaprogram from Spanish MCIN / AEI (Grant No.: CEX2021-001214-S)
and is funded by the CERCA Programme / Generalitat de Catalunya. ICN2 is founding
member of e-DREAM [70].'
article_number: '151405'
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Yu
full_name: Liu, Yu
id: 2A70014E-F248-11E8-B48F-1D18A9856A87
last_name: Liu
orcid: 0000-0001-7313-6740
- first_name: Seungho
full_name: Lee, Seungho
id: BB243B88-D767-11E9-B658-BC13E6697425
last_name: Lee
orcid: 0000-0002-6962-8598
- first_name: Christine
full_name: Fiedler, Christine
id: bd3fceba-dc74-11ea-a0a7-c17f71817366
last_name: Fiedler
- first_name: Maria Chiara
full_name: ' Spadaro, Maria Chiara'
last_name: ' Spadaro'
- first_name: Cheng
full_name: Chang, Cheng
id: 9E331C2E-9F27-11E9-AE48-5033E6697425
last_name: Chang
orcid: 0000-0002-9515-4277
- first_name: Mingquan
full_name: Li, Mingquan
last_name: Li
- first_name: Min
full_name: Hong, Min
last_name: Hong
- first_name: Jordi
full_name: Arbiol, Jordi
last_name: Arbiol
- first_name: Maria
full_name: Ibáñez, Maria
id: 43C61214-F248-11E8-B48F-1D18A9856A87
last_name: Ibáñez
orcid: 0000-0001-5013-2843
citation:
ama: Liu Y, Lee S, Fiedler C, et al. Enhancing thermoelectric performance of solutionpProcessed
polycrystalline SnSe with PbSe nanocrystals. Chemical Engineering Journal.
2024;490. doi:10.1016/j.cej.2024.151405
apa: Liu, Y., Lee, S., Fiedler, C., Spadaro, M. C., Chang, C., Li, M., … Ibáñez,
M. (2024). Enhancing thermoelectric performance of solutionpProcessed polycrystalline
SnSe with PbSe nanocrystals. Chemical Engineering Journal. Elsevier. https://doi.org/10.1016/j.cej.2024.151405
chicago: Liu, Yu, Seungho Lee, Christine Fiedler, Maria Chiara Spadaro, Cheng Chang,
Mingquan Li, Min Hong, Jordi Arbiol, and Maria Ibáñez. “Enhancing Thermoelectric
Performance of SolutionpProcessed Polycrystalline SnSe with PbSe Nanocrystals.”
Chemical Engineering Journal. Elsevier, 2024. https://doi.org/10.1016/j.cej.2024.151405.
ieee: Y. Liu et al., “Enhancing thermoelectric performance of solutionpProcessed
polycrystalline SnSe with PbSe nanocrystals,” Chemical Engineering Journal,
vol. 490. Elsevier, 2024.
ista: Liu Y, Lee S, Fiedler C, Spadaro MC, Chang C, Li M, Hong M, Arbiol J, Ibáñez
M. 2024. Enhancing thermoelectric performance of solutionpProcessed polycrystalline
SnSe with PbSe nanocrystals. Chemical Engineering Journal. 490, 151405.
mla: Liu, Yu, et al. “Enhancing Thermoelectric Performance of SolutionpProcessed
Polycrystalline SnSe with PbSe Nanocrystals.” Chemical Engineering Journal,
vol. 490, 151405, Elsevier, 2024, doi:10.1016/j.cej.2024.151405.
short: Y. Liu, S. Lee, C. Fiedler, M.C. Spadaro, C. Chang, M. Li, M. Hong, J. Arbiol,
M. Ibáñez, Chemical Engineering Journal 490 (2024).
corr_author: '1'
date_created: 2024-05-05T22:01:03Z
date_published: 2024-06-15T00:00:00Z
date_updated: 2026-04-07T11:52:31Z
day: '15'
ddc:
- '540'
department:
- _id: MaIb
doi: 10.1016/j.cej.2024.151405
external_id:
isi:
- '001234835500001'
file:
- access_level: open_access
checksum: 6609232a208b9a89d055a270ef0af1fe
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creator: dernst
date_created: 2025-01-09T09:24:29Z
date_updated: 2025-01-09T09:24:29Z
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file_name: 2024_ChemEngineeringJour_Liu.pdf
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intvolume: ' 490'
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language:
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month: '06'
oa: 1
oa_version: Published Version
project:
- _id: 9B8F7476-BA93-11EA-9121-9846C619BF3A
name: 'HighTE: The Werner Siemens Laboratory for the High Throughput Discovery of
Semiconductors for Waste Heat Recovery'
publication: Chemical Engineering Journal
publication_identifier:
issn:
- 1385-8947
publication_status: published
publisher: Elsevier
quality_controlled: '1'
related_material:
record:
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relation: dissertation_contains
status: public
scopus_import: '1'
status: public
title: Enhancing thermoelectric performance of solutionpProcessed polycrystalline
SnSe with PbSe nanocrystals
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 490
year: '2024'
...