---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
PlanS_conform: '1'
_id: '20649'
abstract:
- lang: eng
  text: Ionized proximity zones around luminous quasars provide a unique laboratory
    to characterize the Lyα emission lines from z > 6 galaxies without significant
    attenuation from the intergalactic medium (IGM). However, Lyα line measurements
    for galaxies within high-redshift quasars’ proximity zones have been rare so far.
    Here we present deep spectroscopic observations obtained with the NIRSpec/Micro-Shutter
    Assembly (MSA) instrument on the James Webb Space Telescope of galaxies in two
    z > 6 quasar fields. We measure the Lyα line fluxes for 50 galaxies at 6 < z <
    7 with UV absolute magnitude M UV < −19 (median M UV = −19.97), among which 15
    are located near the luminous quasars, i.e., within Δv < 2500 km s−1. We find
    that galaxies near the quasars show significant flux blueward of the systemic
    Lyα wavelength, and have higher Lyα equivalent width compared to galaxies at similar
    redshifts that are not located within the quasars’ environment. Our result indicates
    little or no redshift evolution for the Lyα emitter fraction from z ∼ 6.4 to z
    ∼ 5. Leveraging the low IGM opacity in the quasars’ vicinity, we evaluate the
    Lyα escape fraction (f esc Ly α) of high-redshift galaxies. Our analysis suggests
    that galaxies at 〈z〉 ≈ 6.4 have an average f esc Ly α = 0.14 ± 0.04. This value
    is consistent with reionization models where the Lyman continuum escape fraction
    is low ( fescLyC ≲ 0.1 ) for luminous galaxies, and where the most luminous galaxies
    have only a minor contribution to the total ionizing photon budget. © 2025. The
    Author(s). Published by the American Astronomical Society.
acknowledgement: "We thank the referee for valuable comments. This work is based on
  observations made with the NASA/ESA/CSA James Webb Space Telescope. The data were
  obtained from the Mikulski Archive for Space Telescopes at the Space Telescope Science
  Institute, which is operated by the Association of Universities for Research in
  Astronomy, Inc., under NASA contract NAS 5-03127 for JWST. These observations are
  associated with program ID #3117 and #4713. Support for\r\nthis work was provided
  by NASA through the NASA Hubble Fellowship grant HST-HF2-51515.001-A awarded by
  the Space Telescope Science Institute, which is operated by the\r\nAssociation of
  Universities for Research in Astronomy, Incorporated, under NASA contract NAS5-26555."
article_number: L12
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Minghao
  full_name: Yue, Minghao
  last_name: Yue
- first_name: Anna Christina
  full_name: Eilers, Anna Christina
  last_name: Eilers
- first_name: Jorryt J
  full_name: Matthee, Jorryt J
  id: 7439a258-f3c0-11ec-9501-9df22fe06720
  last_name: Matthee
  orcid: 0000-0003-2871-127X
- first_name: Rohan P.
  full_name: Naidu, Rohan P.
  last_name: Naidu
- first_name: Rongmon
  full_name: Bordoloi, Rongmon
  last_name: Bordoloi
- first_name: Frederick B.
  full_name: Davies, Frederick B.
  last_name: Davies
- first_name: Joseph F.
  full_name: Hennawi, Joseph F.
  last_name: Hennawi
- first_name: Daichi
  full_name: Kashino, Daichi
  last_name: Kashino
- first_name: Ruari
  full_name: Mackenzie, Ruari
  last_name: Mackenzie
- first_name: Robert A.
  full_name: Simcoe, Robert A.
  last_name: Simcoe
citation:
  ama: Yue M, Eilers AC, Matthee JJ, et al. Escape fractions from unattenuated Lyα
    emitters around luminous z &#62; 6 quasars. <i>The Astrophysical Journal Letters</i>.
    2025;993(1). doi:<a href="https://doi.org/10.3847/2041-8213/ae0e0e">10.3847/2041-8213/ae0e0e</a>
  apa: Yue, M., Eilers, A. C., Matthee, J. J., Naidu, R. P., Bordoloi, R., Davies,
    F. B., … Simcoe, R. A. (2025). Escape fractions from unattenuated Lyα emitters
    around luminous z &#62; 6 quasars. <i>The Astrophysical Journal Letters</i>. IOP
    Publishing. <a href="https://doi.org/10.3847/2041-8213/ae0e0e">https://doi.org/10.3847/2041-8213/ae0e0e</a>
  chicago: Yue, Minghao, Anna Christina Eilers, Jorryt J Matthee, Rohan P. Naidu,
    Rongmon Bordoloi, Frederick B. Davies, Joseph F. Hennawi, Daichi Kashino, Ruari
    Mackenzie, and Robert A. Simcoe. “Escape Fractions from Unattenuated Lyα Emitters
    around Luminous z &#62; 6 Quasars.” <i>The Astrophysical Journal Letters</i>.
    IOP Publishing, 2025. <a href="https://doi.org/10.3847/2041-8213/ae0e0e">https://doi.org/10.3847/2041-8213/ae0e0e</a>.
  ieee: M. Yue <i>et al.</i>, “Escape fractions from unattenuated Lyα emitters around
    luminous z &#62; 6 quasars,” <i>The Astrophysical Journal Letters</i>, vol. 993,
    no. 1. IOP Publishing, 2025.
  ista: Yue M, Eilers AC, Matthee JJ, Naidu RP, Bordoloi R, Davies FB, Hennawi JF,
    Kashino D, Mackenzie R, Simcoe RA. 2025. Escape fractions from unattenuated Lyα
    emitters around luminous z &#62; 6 quasars. The Astrophysical Journal Letters.
    993(1), L12.
  mla: Yue, Minghao, et al. “Escape Fractions from Unattenuated Lyα Emitters around
    Luminous z &#62; 6 Quasars.” <i>The Astrophysical Journal Letters</i>, vol. 993,
    no. 1, L12, IOP Publishing, 2025, doi:<a href="https://doi.org/10.3847/2041-8213/ae0e0e">10.3847/2041-8213/ae0e0e</a>.
  short: M. Yue, A.C. Eilers, J.J. Matthee, R.P. Naidu, R. Bordoloi, F.B. Davies,
    J.F. Hennawi, D. Kashino, R. Mackenzie, R.A. Simcoe, The Astrophysical Journal
    Letters 993 (2025).
date_created: 2025-11-16T23:01:24Z
date_published: 2025-11-01T00:00:00Z
date_updated: 2026-02-16T12:45:16Z
day: '01'
ddc:
- '520'
department:
- _id: JoMa
doi: 10.3847/2041-8213/ae0e0e
external_id:
  arxiv:
  - '2507.05381'
  isi:
  - '001600890100001'
file:
- access_level: open_access
  checksum: 11d35c1c52c000f8c14bc6de2e9f4b3f
  content_type: application/pdf
  creator: dernst
  date_created: 2025-11-24T13:18:34Z
  date_updated: 2025-11-24T13:18:34Z
  file_id: '20680'
  file_name: 2025_AstrophysicalJour_Yue.pdf
  file_size: 39736710
  relation: main_file
  success: 1
file_date_updated: 2025-11-24T13:18:34Z
has_accepted_license: '1'
intvolume: '       993'
isi: 1
issue: '1'
language:
- iso: eng
license: https://creativecommons.org/licenses/by/4.0/
month: '11'
oa: 1
oa_version: Published Version
publication: The Astrophysical Journal Letters
publication_identifier:
  eissn:
  - 2041-8213
  issn:
  - 2041-8205
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: Escape fractions from unattenuated Lyα emitters around luminous z > 6 quasars
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 993
year: '2025'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
PlanS_conform: '1'
_id: '20660'
abstract:
- lang: eng
  text: "We used observations from the JWST Emission Line Survey (JELS) to measure
    the half-light radii (re) of 23 Hα-emitting starforming (SF) galaxies at z = 6.1
    in the PRIMER/COSMOS field. Galaxy sizes were measured in JWST near-infrared camera
    observations in rest-frame Hα (tracing recent star formation) with the F466N and
    F470N narrow-band filters from JELS, and\r\ncompared against rest-R- and V -band
    (tracing established stellar populations) and near-ultraviolet sizes. We find
    a size–stellar mass(re − M∗) relationship with a slope that is consistent with
    literature values at lower redshifts, though offset to lowersizes. We observe
    a large scatter in re at low stellar mass (M∗ < 10^8.4 Mo) which we believe is
    the result of bursty star formation histories (SFHs) of SF galaxies at the Epoch
    of Reionization (EoR). We find that the stellar and ionized gas components are
    similar in size at z = 6.1. The evidence of already-established stellar components
    in these Hα emitters (HAEs) indicates previous episodes of star formation have
    occurred. As such, following other JELS studies finding our HAEs are undergoing
    a current burst of star formation, we believe our results indicate that SF galaxies
    at the end of the EoR have already experienced a bursty SFH. From our re − M∗
    relationship, we find re,F444W = 0.76 ± 0.46 kpc for fixed stellar mass M∗ = 10^9.25
    M, which is in agreement with other observations and simulations of SF galaxies
    in the literature. We find a close-pair (major) merger fraction of (fmaj. merger
    =0.44 ± 0.22) fmerger = 0.43 ± 0.11 for galaxy separations d <~ 25 kpc, which
    is in agreement with other z ≈ 6 studies."
acknowledgement: "This work makes use of ASTROPY, 7 a community-developed core PYTHON
  package for Astronomy (Astropy Collaboration 2013, 2018, 2022), as well as the NUMPY
  (C. R. Harris et al. 2020) and SCIPY (P.Virtanen et al. 2020) packages(see also
  T. E. Oliphant 2007). All plots\r\nwere created using the MATPLOTLIB 2D graphics
  PYTHON package (J. D. Hunter 2007). Conversions between redshift and lookback time
  in our selected cosmological model were done using the Javascript cosmological calculator
  from E. L. Wright (2006).8 The authors would like to thank the anonymous referee
  for their constructive comments and suggestions which have strengthened the analysis
  of this work and improved the paper. The authors also gratefully acknowledge Ian
  Smail for providing valuable feedback and helping to guide the science of this paper.
  This work is based on observations made with the NASA/ESA/CSA James Webb Space\r\nTelescope.
  The data were obtained from the Mikulski Archive for Space Telescopes9 at the Space
  Telescope Science Institute, which is operated by the Association of Universities
  for Research in Astronomy, Inc., under NASA contract NAS 5-03127 for JWST. These
  observations are associated with programs GO no. 2321 (JELS) and GO no. 1837 (PRIMER).
  The authors acknowledge the PRIMER team for developing their observing program with
  a zero-exclusive-access period. HMOS acknowledges support from an STFC PhD studentship
  and the Faculty of Science and Technology at Lancaster University. PNB is grateful
  for support from the UK STFC\r\nvia grants ST/V000594/1 and ST/Y000951/1. JSD acknowledges
  the support of the Royal Society via a Royal Society Research Professorship. LOF
  acknowledges funding by ANID BECAS/DOCTORADO NACIONAL 21220499.CLH acknowledges
  support from the Oxford\r\nHintze Centre for Astrophysical Surveys which is funded
  through generous support from the Hintze family charity foundation. EI gratefully
  acknowledge financial support from ANID – MILENIO –NCN2024 112 and ANID FONDECYT
  Regular 1221846. For the purpose of open access, the authors have applied a Creative
  Commons attribution (CC BY) licence to any author accepted manuscript version arising."
article_processing_charge: Yes
article_type: original
author:
- first_name: H. M.O.
  full_name: Stephenson, H. M.O.
  last_name: Stephenson
- first_name: J. P.
  full_name: Stott, J. P.
  last_name: Stott
- first_name: C. A.
  full_name: Pirie, C. A.
  last_name: Pirie
- first_name: K. J.
  full_name: Duncan, K. J.
  last_name: Duncan
- first_name: D. J.
  full_name: Mcleod, D. J.
  last_name: Mcleod
- first_name: P. N.
  full_name: Best, P. N.
  last_name: Best
- first_name: M.
  full_name: Brinch, M.
  last_name: Brinch
- first_name: M.
  full_name: Clausen, M.
  last_name: Clausen
- first_name: R. K.
  full_name: Cochrane, R. K.
  last_name: Cochrane
- first_name: J. S.
  full_name: Dunlop, J. S.
  last_name: Dunlop
- first_name: S. R.
  full_name: Flury, S. R.
  last_name: Flury
- first_name: J. E.
  full_name: Geach, J. E.
  last_name: Geach
- first_name: C. L.
  full_name: Hale, C. L.
  last_name: Hale
- first_name: E.
  full_name: Ibar, E.
  last_name: Ibar
- first_name: Zefeng
  full_name: Li, Zefeng
  last_name: Li
- first_name: Jorryt J
  full_name: Matthee, Jorryt J
  id: 7439a258-f3c0-11ec-9501-9df22fe06720
  last_name: Matthee
  orcid: 0000-0003-2871-127X
- first_name: R. J.
  full_name: Mclure, R. J.
  last_name: Mclure
- first_name: L.
  full_name: Ossa-Fuentes, L.
  last_name: Ossa-Fuentes
- first_name: A. L.
  full_name: Patrick, A. L.
  last_name: Patrick
- first_name: D.
  full_name: Sobral, D.
  last_name: Sobral
- first_name: A. M.
  full_name: Swinbank, A. M.
  last_name: Swinbank
citation:
  ama: 'Stephenson HMO, Stott JP, Pirie CA, et al. The JWST Emission Line Survey (JELS):
    The sizes and merger fraction of star-forming galaxies during the Epoch of Reionization.
    <i>Monthly Notices of the Royal Astronomical Society</i>. 2025;544(2):1412-1431.
    doi:<a href="https://doi.org/10.1093/mnras/staf1725">10.1093/mnras/staf1725</a>'
  apa: 'Stephenson, H. M. O., Stott, J. P., Pirie, C. A., Duncan, K. J., Mcleod, D.
    J., Best, P. N., … Swinbank, A. M. (2025). The JWST Emission Line Survey (JELS):
    The sizes and merger fraction of star-forming galaxies during the Epoch of Reionization.
    <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford University Press.
    <a href="https://doi.org/10.1093/mnras/staf1725">https://doi.org/10.1093/mnras/staf1725</a>'
  chicago: 'Stephenson, H. M.O., J. P. Stott, C. A. Pirie, K. J. Duncan, D. J. Mcleod,
    P. N. Best, M. Brinch, et al. “The JWST Emission Line Survey (JELS): The Sizes
    and Merger Fraction of Star-Forming Galaxies during the Epoch of Reionization.”
    <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford University Press,
    2025. <a href="https://doi.org/10.1093/mnras/staf1725">https://doi.org/10.1093/mnras/staf1725</a>.'
  ieee: 'H. M. O. Stephenson <i>et al.</i>, “The JWST Emission Line Survey (JELS):
    The sizes and merger fraction of star-forming galaxies during the Epoch of Reionization,”
    <i>Monthly Notices of the Royal Astronomical Society</i>, vol. 544, no. 2. Oxford
    University Press, pp. 1412–1431, 2025.'
  ista: 'Stephenson HMO, Stott JP, Pirie CA, Duncan KJ, Mcleod DJ, Best PN, Brinch
    M, Clausen M, Cochrane RK, Dunlop JS, Flury SR, Geach JE, Hale CL, Ibar E, Li
    Z, Matthee JJ, Mclure RJ, Ossa-Fuentes L, Patrick AL, Sobral D, Swinbank AM. 2025.
    The JWST Emission Line Survey (JELS): The sizes and merger fraction of star-forming
    galaxies during the Epoch of Reionization. Monthly Notices of the Royal Astronomical
    Society. 544(2), 1412–1431.'
  mla: 'Stephenson, H. M. O., et al. “The JWST Emission Line Survey (JELS): The Sizes
    and Merger Fraction of Star-Forming Galaxies during the Epoch of Reionization.”
    <i>Monthly Notices of the Royal Astronomical Society</i>, vol. 544, no. 2, Oxford
    University Press, 2025, pp. 1412–31, doi:<a href="https://doi.org/10.1093/mnras/staf1725">10.1093/mnras/staf1725</a>.'
  short: H.M.O. Stephenson, J.P. Stott, C.A. Pirie, K.J. Duncan, D.J. Mcleod, P.N.
    Best, M. Brinch, M. Clausen, R.K. Cochrane, J.S. Dunlop, S.R. Flury, J.E. Geach,
    C.L. Hale, E. Ibar, Z. Li, J.J. Matthee, R.J. Mclure, L. Ossa-Fuentes, A.L. Patrick,
    D. Sobral, A.M. Swinbank, Monthly Notices of the Royal Astronomical Society 544
    (2025) 1412–1431.
date_created: 2025-11-23T23:01:37Z
date_published: 2025-12-01T00:00:00Z
date_updated: 2025-12-01T15:25:11Z
day: '01'
ddc:
- '520'
department:
- _id: JoMa
doi: 10.1093/mnras/staf1725
external_id:
  isi:
  - '001611415800001'
file:
- access_level: open_access
  checksum: ddb3f429d2246bbf536efb4b0e52f3a8
  content_type: application/pdf
  creator: dernst
  date_created: 2025-11-24T10:35:15Z
  date_updated: 2025-11-24T10:35:15Z
  file_id: '20678'
  file_name: 2025_MonthlyNoticesRAS_Stephenson.pdf
  file_size: 3625308
  relation: main_file
  success: 1
file_date_updated: 2025-11-24T10:35:15Z
has_accepted_license: '1'
intvolume: '       544'
isi: 1
issue: '2'
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
page: 1412-1431
publication: Monthly Notices of the Royal Astronomical Society
publication_identifier:
  eissn:
  - 1365-2966
  issn:
  - 0035-8711
publication_status: published
publisher: Oxford University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'The JWST Emission Line Survey (JELS): The sizes and merger fraction of star-forming
  galaxies during the Epoch of Reionization'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 544
year: '2025'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
PlanS_conform: '1'
_id: '20662'
abstract:
- lang: eng
  text: Task-based functional magnetic resonance imaging (fMRI) reveals individual
    differences in neural correlates of cognition but faces scalability challenges
    due to cognitive demands, protocol variability, and limited task coverage in large
    datasets. Here, we propose DeepTaskGen, a deep-learning approach that synthesizes
    non-acquired task-based contrast maps from resting-state (rs-) fMRI. We validate
    this approach using the Human Connectome Project lifespan data, then generate
    47 contrast maps from 7 different cognitive tasks for over 20,000 individuals
    from UK Biobank. DeepTaskGen outperforms several benchmarks in generating synthetic
    task-contrast maps, achieving superior reconstruction performance while retaining
    inter-individual variation essential for biomarker development. We further show
    comparable or superior predictive performance of synthetic maps relative to actual
    maps and rs-connectomes across diverse demographic, cognitive, and clinical variables.
    This approach facilitates the study of individual differences and the generation
    of task-related biomarkers by enabling the generation of arbitrary functional
    cognitive tasks from readily available rs-fMRI data.
acknowledgement: 'Funded by the European Union (Grant agreement No 101057429). Complementary
  funding was received by UK Research and Innovation (UKRI) under the UK government’s
  Horizon Europe funding guarantee (10131373 and 10038599) and the National Key R&D
  Program of Ministry of Science and Technology of China (MOST 2023YFE0199700). Views
  and opinions expressed are however those of the author(s) only and do not necessarily
  reflect those of the European Union, the European Health and Digital Executive Agency
  (HADEA), UKRI or MOST. Neither the European Union nor HADEA nor UKRI nor MOST can
  be held responsible for them. This work has also been supported by a Grant from
  the German Research Foundation to the ENIGMA task-based fMRI Working Group (DFG
  ER 724/4–1, WA 1539/11–1). Data used in this study were provided in part by the
  Human Connectome Project, WU-Minn Consortium (principal investigators: D. Van Essen
  and K. Ugurbil; grant number 1U54MH091657), funded by the 16 National Institutes
  of Health (NIH) institutes and centers supporting the NIH Blueprint for Neuroscience
  Research, and by the McDonnell Center for Systems Neuroscience at Washington University.
  Additionally, this research utilized data obtained from UK Biobank, a large-scale
  biomedical database. Open Access funding enabled and organized by Projekt DEAL.'
article_number: '1572'
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Emin
  full_name: Serin, Emin
  last_name: Serin
- first_name: Kerstin
  full_name: Ritter, Kerstin
  last_name: Ritter
- first_name: Gunter
  full_name: Schumann, Gunter
  last_name: Schumann
- first_name: Tobias
  full_name: Banaschewski, Tobias
  last_name: Banaschewski
- first_name: Andre
  full_name: Marquand, Andre
  last_name: Marquand
- first_name: Henrik
  full_name: Walter, Henrik
  last_name: Walter
- first_name: George
  full_name: Ogoh, George
  last_name: Ogoh
- first_name: Bernd Carsten
  full_name: Stahl, Bernd Carsten
  last_name: Stahl
- first_name: Ragnhild
  full_name: Brandlistuen, Ragnhild
  last_name: Brandlistuen
- first_name: Tamara
  full_name: Schikowski, Tamara
  last_name: Schikowski
- first_name: Allan H.
  full_name: Young, Allan H.
  last_name: Young
- first_name: Yu
  full_name: Xinyang, Yu
  last_name: Xinyang
- first_name: Zuo
  full_name: Zhang, Zuo
  last_name: Zhang
- first_name: Kofoworola
  full_name: Agunbiade, Kofoworola
  last_name: Agunbiade
- first_name: Di
  full_name: Chen, Di
  last_name: Chen
- first_name: Sylvane
  full_name: Desrivières, Sylvane
  last_name: Desrivières
- first_name: Nicholas
  full_name: Clinton, Nicholas
  last_name: Clinton
- first_name: Paul
  full_name: Thompson, Paul
  last_name: Thompson
- first_name: Venessa
  full_name: Köhler, Venessa
  last_name: Köhler
- first_name: Ameli
  full_name: Schwalber, Ameli
  last_name: Schwalber
- first_name: Vince D.
  full_name: Calhoun, Vince D.
  last_name: Calhoun
- first_name: Xiao
  full_name: Chang, Xiao
  last_name: Chang
- first_name: Yanqing
  full_name: Zhang, Yanqing
  last_name: Zhang
- first_name: Yuzhu
  full_name: Li, Yuzhu
  last_name: Li
- first_name: Yuxiang
  full_name: Dai, Yuxiang
  last_name: Dai
- first_name: Jiacan
  full_name: Yuan, Jiacan
  last_name: Yuan
- first_name: Yunman
  full_name: Xia, Yunman
  last_name: Xia
- first_name: Tianye
  full_name: Jia, Tianye
  last_name: Jia
- first_name: Paul
  full_name: Renner, Paul
  last_name: Renner
- first_name: Sören
  full_name: Hese, Sören
  last_name: Hese
- first_name: Bernhard
  full_name: Spanlang, Bernhard
  last_name: Spanlang
- first_name: Charlie
  full_name: Pearmund, Charlie
  last_name: Pearmund
- first_name: Anastasios Polykarpos
  full_name: Athanasiadis, Anastasios Polykarpos
  last_name: Athanasiadis
- first_name: Spase
  full_name: Petkoski, Spase
  last_name: Petkoski
- first_name: Viktor
  full_name: Jirsa, Viktor
  last_name: Jirsa
- first_name: Karen
  full_name: Schmitt, Karen
  last_name: Schmitt
- first_name: Johannes H.
  full_name: Wilbertz, Johannes H.
  last_name: Wilbertz
- first_name: Myrto
  full_name: Patraskaki, Myrto
  last_name: Patraskaki
- first_name: Peter
  full_name: Sommer, Peter
  last_name: Sommer
- first_name: Stefanie
  full_name: Heilmann-Heimbach, Stefanie
  last_name: Heilmann-Heimbach
- first_name: Carina M.
  full_name: Mathey, Carina M.
  last_name: Mathey
- first_name: Abigail J.
  full_name: Miller, Abigail J.
  last_name: Miller
- first_name: Isabelle
  full_name: Claus, Isabelle
  last_name: Claus
- first_name: Markus M.
  full_name: Nöthen, Markus M.
  last_name: Nöthen
- first_name: Per
  full_name: Hoffmann, Per
  last_name: Hoffmann
- first_name: Andreas J.
  full_name: Forstner, Andreas J.
  last_name: Forstner
- first_name: Alvaro
  full_name: Pastor, Alvaro
  last_name: Pastor
- first_name: Jaime
  full_name: Gallego, Jaime
  last_name: Gallego
- first_name: Reiya
  full_name: Itatani, Reiya
  last_name: Itatani
- first_name: Francisco
  full_name: Eiroa-Orosa, Francisco
  last_name: Eiroa-Orosa
- first_name: Guillem
  full_name: Feixas, Guillem
  last_name: Feixas
- first_name: Mel
  full_name: Slater, Mel
  last_name: Slater
- first_name: Gaia
  full_name: Novarino, Gaia
  id: 3E57A680-F248-11E8-B48F-1D18A9856A87
  last_name: Novarino
  orcid: 0000-0002-7673-7178
- first_name: Sarah Jane
  full_name: Böttger, Sarah Jane
  last_name: Böttger
- first_name: Mira
  full_name: Tschorn, Mira
  last_name: Tschorn
- first_name: Michael
  full_name: Rapp, Michael
  last_name: Rapp
- first_name: Helga
  full_name: Ask, Helga
  last_name: Ask
- first_name: Rikka
  full_name: Kjelkenes, Rikka
  last_name: Kjelkenes
- first_name: Sara
  full_name: Fernandez, Sara
  last_name: Fernandez
- first_name: Dennis
  full_name: Van Der Meer, Dennis
  last_name: Van Der Meer
- first_name: Lars T.
  full_name: Westlye, Lars T.
  last_name: Westlye
- first_name: Ole A.
  full_name: Andreassen, Ole A.
  last_name: Andreassen
- first_name: Rieke
  full_name: Aden, Rieke
  last_name: Aden
- first_name: Beke
  full_name: Seefried, Beke
  last_name: Seefried
- first_name: Frauke
  full_name: Nees, Frauke
  last_name: Nees
- first_name: Maja
  full_name: Neidhart, Maja
  last_name: Neidhart
- first_name: Argyris
  full_name: Stringaris, Argyris
  last_name: Stringaris
- first_name: Emanuel
  full_name: Schwarz, Emanuel
  last_name: Schwarz
- first_name: Nathalie
  full_name: Holz, Nathalie
  last_name: Holz
- first_name: Heike
  full_name: Tost, Heike
  last_name: Tost
- first_name: Andreas
  full_name: Meyer-Lindenberg, Andreas
  last_name: Meyer-Lindenberg
- first_name: Nina
  full_name: Christmann, Nina
  last_name: Christmann
- first_name: Karina
  full_name: Janson, Karina
  last_name: Janson
- first_name: Kerstin
  full_name: Schepanski, Kerstin
  last_name: Schepanski
- first_name: Tatjana
  full_name: Schütz, Tatjana
  last_name: Schütz
- first_name: Ulrike Helene
  full_name: Taron, Ulrike Helene
  last_name: Taron
- first_name: Roland
  full_name: Eils, Roland
  last_name: Eils
- first_name: Jean Charles
  full_name: Roy, Jean Charles
  last_name: Roy
- first_name: Tristram A.
  full_name: Lett, Tristram A.
  last_name: Lett
- first_name: Hedi
  full_name: Kebir, Hedi
  last_name: Kebir
- first_name: Elli
  full_name: Polemiti, Elli
  last_name: Polemiti
- first_name: Esther
  full_name: Hitchen, Esther
  last_name: Hitchen
- first_name: Marcel
  full_name: Jentsch, Marcel
  last_name: Jentsch
- first_name: Emin
  full_name: Serin, Emin
  last_name: Serin
- first_name: Antoine
  full_name: Bernas, Antoine
  last_name: Bernas
- first_name: Nilakshi
  full_name: Vaidya, Nilakshi
  last_name: Vaidya
- first_name: Sven
  full_name: Twardziok, Sven
  last_name: Twardziok
- first_name: Markus
  full_name: Ralser, Markus
  last_name: Ralser
- first_name: Andreas
  full_name: Heinz, Andreas
  last_name: Heinz
- first_name: Gunter
  full_name: Schumann, Gunter
  last_name: Schumann
citation:
  ama: Serin E, Ritter K, Schumann G, et al. Generating synthetic task-based brain
    fingerprints for population neuroscience using deep learning. <i>Communications
    Biology</i>. 2025;8. doi:<a href="https://doi.org/10.1038/s42003-025-09158-6">10.1038/s42003-025-09158-6</a>
  apa: Serin, E., Ritter, K., Schumann, G., Banaschewski, T., Marquand, A., Walter,
    H., … Schumann, G. (2025). Generating synthetic task-based brain fingerprints
    for population neuroscience using deep learning. <i>Communications Biology</i>.
    Springer Nature. <a href="https://doi.org/10.1038/s42003-025-09158-6">https://doi.org/10.1038/s42003-025-09158-6</a>
  chicago: Serin, Emin, Kerstin Ritter, Gunter Schumann, Tobias Banaschewski, Andre
    Marquand, Henrik Walter, George Ogoh, et al. “Generating Synthetic Task-Based
    Brain Fingerprints for Population Neuroscience Using Deep Learning.” <i>Communications
    Biology</i>. Springer Nature, 2025. <a href="https://doi.org/10.1038/s42003-025-09158-6">https://doi.org/10.1038/s42003-025-09158-6</a>.
  ieee: E. Serin <i>et al.</i>, “Generating synthetic task-based brain fingerprints
    for population neuroscience using deep learning,” <i>Communications Biology</i>,
    vol. 8. Springer Nature, 2025.
  ista: Serin E, Ritter K, Schumann G, Banaschewski T, Marquand A, Walter H, Ogoh
    G, Stahl BC, Brandlistuen R, Schikowski T, Young AH, Xinyang Y, Zhang Z, Agunbiade
    K, Chen D, Desrivières S, Clinton N, Thompson P, Köhler V, Schwalber A, Calhoun
    VD, Chang X, Zhang Y, Li Y, Dai Y, Yuan J, Xia Y, Jia T, Renner P, Hese S, Spanlang
    B, Pearmund C, Athanasiadis AP, Petkoski S, Jirsa V, Schmitt K, Wilbertz JH, Patraskaki
    M, Sommer P, Heilmann-Heimbach S, Mathey CM, Miller AJ, Claus I, Nöthen MM, Hoffmann
    P, Forstner AJ, Pastor A, Gallego J, Itatani R, Eiroa-Orosa F, Feixas G, Slater
    M, Novarino G, Böttger SJ, Tschorn M, Rapp M, Ask H, Kjelkenes R, Fernandez S,
    Van Der Meer D, Westlye LT, Andreassen OA, Aden R, Seefried B, Nees F, Neidhart
    M, Stringaris A, Schwarz E, Holz N, Tost H, Meyer-Lindenberg A, Christmann N,
    Janson K, Schepanski K, Schütz T, Taron UH, Eils R, Roy JC, Lett TA, Kebir H,
    Polemiti E, Hitchen E, Jentsch M, Serin E, Bernas A, Vaidya N, Twardziok S, Ralser
    M, Heinz A, Schumann G. 2025. Generating synthetic task-based brain fingerprints
    for population neuroscience using deep learning. Communications Biology. 8, 1572.
  mla: Serin, Emin, et al. “Generating Synthetic Task-Based Brain Fingerprints for
    Population Neuroscience Using Deep Learning.” <i>Communications Biology</i>, vol.
    8, 1572, Springer Nature, 2025, doi:<a href="https://doi.org/10.1038/s42003-025-09158-6">10.1038/s42003-025-09158-6</a>.
  short: E. Serin, K. Ritter, G. Schumann, T. Banaschewski, A. Marquand, H. Walter,
    G. Ogoh, B.C. Stahl, R. Brandlistuen, T. Schikowski, A.H. Young, Y. Xinyang, Z.
    Zhang, K. Agunbiade, D. Chen, S. Desrivières, N. Clinton, P. Thompson, V. Köhler,
    A. Schwalber, V.D. Calhoun, X. Chang, Y. Zhang, Y. Li, Y. Dai, J. Yuan, Y. Xia,
    T. Jia, P. Renner, S. Hese, B. Spanlang, C. Pearmund, A.P. Athanasiadis, S. Petkoski,
    V. Jirsa, K. Schmitt, J.H. Wilbertz, M. Patraskaki, P. Sommer, S. Heilmann-Heimbach,
    C.M. Mathey, A.J. Miller, I. Claus, M.M. Nöthen, P. Hoffmann, A.J. Forstner, A.
    Pastor, J. Gallego, R. Itatani, F. Eiroa-Orosa, G. Feixas, M. Slater, G. Novarino,
    S.J. Böttger, M. Tschorn, M. Rapp, H. Ask, R. Kjelkenes, S. Fernandez, D. Van
    Der Meer, L.T. Westlye, O.A. Andreassen, R. Aden, B. Seefried, F. Nees, M. Neidhart,
    A. Stringaris, E. Schwarz, N. Holz, H. Tost, A. Meyer-Lindenberg, N. Christmann,
    K. Janson, K. Schepanski, T. Schütz, U.H. Taron, R. Eils, J.C. Roy, T.A. Lett,
    H. Kebir, E. Polemiti, E. Hitchen, M. Jentsch, E. Serin, A. Bernas, N. Vaidya,
    S. Twardziok, M. Ralser, A. Heinz, G. Schumann, Communications Biology 8 (2025).
date_created: 2025-11-23T23:01:38Z
date_published: 2025-12-01T00:00:00Z
date_updated: 2025-12-01T15:24:07Z
day: '01'
ddc:
- '570'
department:
- _id: GaNo
doi: 10.1038/s42003-025-09158-6
external_id:
  isi:
  - '001614464000001'
  pmid:
  - '41238730'
file:
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  checksum: b8b3c1abe7048a09b920082a37e786a5
  content_type: application/pdf
  creator: dernst
  date_created: 2025-11-24T09:12:19Z
  date_updated: 2025-11-24T09:12:19Z
  file_id: '20675'
  file_name: 2025_CommunicationsBiology_Serin.pdf
  file_size: 1588155
  relation: main_file
  success: 1
file_date_updated: 2025-11-24T09:12:19Z
has_accepted_license: '1'
intvolume: '         8'
isi: 1
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
pmid: 1
publication: Communications Biology
publication_identifier:
  eissn:
  - 2399-3642
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Generating synthetic task-based brain fingerprints for population neuroscience
  using deep learning
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 8
year: '2025'
...
---
OA_place: publisher
OA_type: diamond
_id: '18852'
abstract:
- lang: eng
  text: 'Recent observations have found a growing number of hypervelocity stars with
    speeds of ≈1500 − 2500 km s−1 that could have only been produced through thermonuclear
    supernovae in white dwarf binaries. Most of the observed hypervelocity runaways
    in this class display a surprising inflated structure: their current radii are
    roughly an order of magnitude greater than they would have been as white dwarfs
    filling their Roche lobe. While many simulations exist studying the dynamical
    phase leading to supernova detonation in these systems, no detailed calculations
    of the long-term structure of the runaways have yet been performed. We used an
    existing AREPO hydrodynamical simulation of a supernova in a white dwarf binary
    as a starting point for the evolution of these stars with the one-dimensional
    stellar evolution code MESA. We show that the supernova shock is not energetic
    enough to inflate the white dwarf over timescales longer than a few thousand years,
    significantly shorter than the 105 − 6 year lifetimes inferred for observed hypervelocity
    runaways. Although they experience a shock from a supernova less than ≈0.02 R⊙
    away, our models do not experience significant interior heating, and all contract
    back to radii of around 0.01 R⊙ within about 104 years. Explaining the observed
    inflated states requires either an additional source of significant heating or
    some other physics that is not yet accounted for in the subsequent evolution.'
acknowledgement: 'This project was originally started as part of the Kavli Summer
  Program which took place in the Max Planck Institute for Astrophysics in Garching
  in July 2023, supported by the Kavli Foundation. We are grateful to Stephen Justham,
  Selma de Mink, and Jim Fuller for enriching discussions. We would like to thank
  the anonymous referee for their helpful report. A.B. was supported by the Deutsche
  Forschungsgemeinschaft (DFG) through grant GE2506/18-1. K.J.S. was supported by
  NASA through the Astrophysics Theory Program (80NSSC20K0544) and by NASA/ESA Hubble
  Space Telescope programs #15871 and #15918. W.E.K. was supported by NSF Grants OAC-2311323,
  AST-2206523, and NASA/ESA HST-AR-Theory HSTAR-16613.002-A. K.E. was supported in
  part by HST-GO-17441.001-A. AB and ASR would like to thank Rob Farmer for his support
  with PyMESA.'
article_number: A114
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Aakash
  full_name: Bhat, Aakash
  last_name: Bhat
- first_name: Evan B.
  full_name: Bauer, Evan B.
  last_name: Bauer
- first_name: Rüdiger
  full_name: Pakmor, Rüdiger
  last_name: Pakmor
- first_name: Ken J.
  full_name: Shen, Ken J.
  last_name: Shen
- first_name: Ilaria
  full_name: Caiazzo, Ilaria
  id: 8ae5b6e7-2a03-11ee-914d-b58ed7a3b47d
  last_name: Caiazzo
  orcid: 0000-0002-4770-5388
- first_name: Abinaya Swaruba
  full_name: Rajamuthukumar, Abinaya Swaruba
  last_name: Rajamuthukumar
- first_name: Kareem
  full_name: El-Badry, Kareem
  last_name: El-Badry
- first_name: Wolfgang E.
  full_name: Kerzendorf, Wolfgang E.
  last_name: Kerzendorf
citation:
  ama: Bhat A, Bauer EB, Pakmor R, et al. Supernova shocks cannot explain the inflated
    state of hypervelocity runaways from white dwarf binaries. <i>Astronomy &#38;
    Astrophysics</i>. 2025;693(1). doi:<a href="https://doi.org/10.1051/0004-6361/202451371">10.1051/0004-6361/202451371</a>
  apa: Bhat, A., Bauer, E. B., Pakmor, R., Shen, K. J., Caiazzo, I., Rajamuthukumar,
    A. S., … Kerzendorf, W. E. (2025). Supernova shocks cannot explain the inflated
    state of hypervelocity runaways from white dwarf binaries. <i>Astronomy &#38;
    Astrophysics</i>. EDP Sciences. <a href="https://doi.org/10.1051/0004-6361/202451371">https://doi.org/10.1051/0004-6361/202451371</a>
  chicago: Bhat, Aakash, Evan B. Bauer, Rüdiger Pakmor, Ken J. Shen, Ilaria Caiazzo,
    Abinaya Swaruba Rajamuthukumar, Kareem El-Badry, and Wolfgang E. Kerzendorf. “Supernova
    Shocks Cannot Explain the Inflated State of Hypervelocity Runaways from White
    Dwarf Binaries.” <i>Astronomy &#38; Astrophysics</i>. EDP Sciences, 2025. <a href="https://doi.org/10.1051/0004-6361/202451371">https://doi.org/10.1051/0004-6361/202451371</a>.
  ieee: A. Bhat <i>et al.</i>, “Supernova shocks cannot explain the inflated state
    of hypervelocity runaways from white dwarf binaries,” <i>Astronomy &#38; Astrophysics</i>,
    vol. 693, no. 1. EDP Sciences, 2025.
  ista: Bhat A, Bauer EB, Pakmor R, Shen KJ, Caiazzo I, Rajamuthukumar AS, El-Badry
    K, Kerzendorf WE. 2025. Supernova shocks cannot explain the inflated state of
    hypervelocity runaways from white dwarf binaries. Astronomy &#38; Astrophysics.
    693(1), A114.
  mla: Bhat, Aakash, et al. “Supernova Shocks Cannot Explain the Inflated State of
    Hypervelocity Runaways from White Dwarf Binaries.” <i>Astronomy &#38; Astrophysics</i>,
    vol. 693, no. 1, A114, EDP Sciences, 2025, doi:<a href="https://doi.org/10.1051/0004-6361/202451371">10.1051/0004-6361/202451371</a>.
  short: A. Bhat, E.B. Bauer, R. Pakmor, K.J. Shen, I. Caiazzo, A.S. Rajamuthukumar,
    K. El-Badry, W.E. Kerzendorf, Astronomy &#38; Astrophysics 693 (2025).
date_created: 2025-01-19T23:01:51Z
date_published: 2025-01-07T00:00:00Z
date_updated: 2026-02-16T12:08:05Z
day: '07'
ddc:
- '520'
department:
- _id: IlCa
doi: 10.1051/0004-6361/202451371
external_id:
  arxiv:
  - '2407.03424'
  isi:
  - '001406577300001'
file:
- access_level: open_access
  checksum: e532b9c8123c29cfb0ee758e6d00453c
  content_type: application/pdf
  creator: dernst
  date_created: 2025-01-20T09:57:00Z
  date_updated: 2025-01-20T09:57:00Z
  file_id: '18861'
  file_name: 2025_AstronomyAstrophysics_Bhat.pdf
  file_size: 1692527
  relation: main_file
  success: 1
file_date_updated: 2025-01-20T09:57:00Z
has_accepted_license: '1'
intvolume: '       693'
isi: 1
issue: '1'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
publication: Astronomy & Astrophysics
publication_identifier:
  eissn:
  - 1432-0746
  issn:
  - 0004-6361
publication_status: published
publisher: EDP Sciences
quality_controlled: '1'
scopus_import: '1'
status: public
title: Supernova shocks cannot explain the inflated state of hypervelocity runaways
  from white dwarf binaries
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 693
year: '2025'
...
---
OA_place: publisher
OA_type: diamond
_id: '18854'
abstract:
- lang: eng
  text: "Context. One of the surprising early findings with JWST has been the discovery
    of a strong “roll-over” or a softening of the absorption edge of Lyα in a large
    number of galaxies at z ≳ 6, in addition to systematic offsets from photometric
    redshift estimates and fundamental galaxy scaling relations. This has been interpreted
    as strong cumulative damped Lyα absorption (DLA) wings from high column densities
    of neutral atomic hydrogen (H I), signifying major gas accretion events in the
    formation of these galaxies.\r\nAims. To explore this new phenomenon systematically,
    we assembled the JWST/NIRSpec PRImordial gas Mass AssembLy (PRIMAL) legacy survey
    of 584 galaxies at z = 5.0 − 13.4, designed to study the physical properties and
    gas in and around galaxies during the reionization epoch.\r\nMethods. We characterized
    this benchmark sample in full and spectroscopically derived the galaxy redshifts,
    metallicities, star formation rates, and ultraviolet (UV) slopes. We defined a
    new diagnostic, the Lyα damping parameter DLyα, to measure and quantify the net
    effect of Lyα emission strength, the H I fraction in the intergalactic medium,
    or the local H I column density for each source. The JWST-PRIMAL survey is based
    on the spectroscopic DAWN JWST Archive (DJA-Spec). We describe DJA-Spec in this
    paper, detailing the reduction methods, the post-processing steps, and basic analysis
    tools. All the software, reduced spectra, and spectroscopically derived quantities
    and catalogs are made publicly available in dedicated repositories.\r\nResults.
    We find that the fraction of galaxies showing strong integrated DLAs with NHI > 1021 cm−2
    only increases slightly from ≈60% at z ≈ 6 up to ≈65 − 90% at z > 8. Similarly,
    the prevalence and prominence of Lyα emission is found to increase with decreasing
    redshift, in qualitative agreement with previous observational results. Strong
    Lyα emitters (LAEs) are predominantly found to be associated with low-metallicity
    and UV faint galaxies. By contrast, strong DLAs are observed in galaxies with
    a variety of intrinsic physical properties, but predominantly at high redshifts
    and low metallicities.\r\nConclusions. Our results indicate that strong DLAs likely
    reflect a particular early assembly phase of reionization-era galaxies, at which
    point they are largely dominated by pristine H I gas accretion. At z = 8 − 10,
    this gas gradually cools and forms into stars that ionize their local surroundings,
    forming large ionized bubbles and producing strong observed Lyα emission at z < 8."
acknowledgement: 'We would like to thank the referee for a detailed and constructive
  report, greatly improving the presentation of the results in this work. We would
  like to thank Peter Jakobsen for his vision and heroic endeavor in optimally designing
  the JWST/NIRSpec instrument and some of its first on-sky observations and for enlightening
  discussions about the intricacies of the NIRSpec data. Further, we would like to
  thank John Chisholm for helpful clarifications and discussions related to the escape
  fraction of ionizing photons and Aayush Saxena for enlightening conversations on
  the escape and absorption of Lyman-α photons. This work has received funding from
  the Swiss State Secretariat for Education, Research and Innovation (SERI) under
  contract number MB22.00072. The Cosmic Dawn Center (DAWN) is funded by the Danish
  National Research Foundation under grant DNRF140. The data products presented herein
  were retrieved from the DAWN JWST Archive (DJA). DJA is an initiative of the Cosmic
  Dawn Center, which is funded by the Danish National Research Foundation under grant
  DNRF140. P.D. acknowledge support from the NWO grant 016.VIDI.189.162 (“ODIN") and
  warmly thanks the European Commission’s and University of Groningen’s CO-FUND Rosalind
  Franklin program. Support from the ERC Advanced Grant INTERSTELLAR H2020/740120
  is kindly acknowledged (A.F.). S.G. acknowledges financial support from the Villum
  Young Investigator grants 37440 and 13160 and the Cosmic Dawn Center. M.K. was supported
  by the ANID BASAL project FB210003. G.E.M. acknowledges financial support from the
  Villum Young Investigator grants 37440 and 13160 and the Cosmic Dawn Center. J.W.
  acknowledges support from the Science and Technology Facilities Council (STFC),
  by the ERC through Advanced Grant 695671 “QUENCH”, by the UKRI Frontier Research
  grant RISEandFALL. Support for this work was provided by NASA through the NASA Hubble
  Fellowship grant HST-HF2-51515.001-A awarded by the Space Telescope Science Institute,
  which is operated by the Association of Universities for Research in Astronomy,
  Incorporated, under NASA contract NAS5-26555. F.C. acknowledges support from a UKRI
  Frontier Research Guarantee Grant (PI Cullen; grant reference EP/X021025/1). J.H.W.
  acknowledges support by NSF grant AST-2108020 and NASA grants 80NSSC20K0520 and
  80NSSC21K1053. NRT acknowledges support through STFC consolidated grant ST/W000857/1.
  M.J.H. is supported by the Swedish Research Council, VetenskapsrÅdet, and is fellow
  of the Knut & Alice Wallenberg foundation. This work is based in part on observations
  made with the NASA/ESA/CSA James Webb Space Telescope. The data were obtained from
  the Mikulski Archive for Space Telescopes (MAST) at the Space Telescope Science
  Institute, which is operated by the Association of Universities for Research in
  Astronomy, Inc., under NASA contract NAS 5-03127 for JWST. Software: This work made
  use of and acknowledge the following software: NumPy (Harris et al. 2020), Matplotlib
  (Hunter 2007), LMfit (Newville et al. 2014), SciPy (Virtanen et al. 2020), grizli
  (Brammer 2023a), Astrodrizzle (Gonzaga et al. 2012), and MsaExp (v0.3; Brammer 2023b).'
article_number: A60
article_processing_charge: No
article_type: original
author:
- first_name: K. E.
  full_name: Heintz, K. E.
  last_name: Heintz
- first_name: G. B.
  full_name: Brammer, G. B.
  last_name: Brammer
- first_name: D.
  full_name: Watson, D.
  last_name: Watson
- first_name: P. A.
  full_name: Oesch, P. A.
  last_name: Oesch
- first_name: L. C.
  full_name: Keating, L. C.
  last_name: Keating
- first_name: M. J.
  full_name: Hayes, M. J.
  last_name: Hayes
- first_name: Unknown
  full_name: Abdurro'Uf, Unknown
  last_name: Abdurro'Uf
- first_name: K. Z.
  full_name: Arellano-Córdova, K. Z.
  last_name: Arellano-Córdova
- first_name: A. C.
  full_name: Carnall, A. C.
  last_name: Carnall
- first_name: C. R.
  full_name: Christiansen, C. R.
  last_name: Christiansen
- first_name: F.
  full_name: Cullen, F.
  last_name: Cullen
- first_name: R.
  full_name: Davé, R.
  last_name: Davé
- first_name: P.
  full_name: Dayal, P.
  last_name: Dayal
- first_name: A.
  full_name: Ferrara, A.
  last_name: Ferrara
- first_name: K.
  full_name: Finlator, K.
  last_name: Finlator
- first_name: J. P.U.
  full_name: Fynbo, J. P.U.
  last_name: Fynbo
- first_name: S. R.
  full_name: Flury, S. R.
  last_name: Flury
- first_name: V.
  full_name: Gelli, V.
  last_name: Gelli
- first_name: S.
  full_name: Gillman, S.
  last_name: Gillman
- first_name: R.
  full_name: Gottumukkala, R.
  last_name: Gottumukkala
- first_name: K.
  full_name: Gould, K.
  last_name: Gould
- first_name: T. R.
  full_name: Greve, T. R.
  last_name: Greve
- first_name: S. E.
  full_name: Hardin, S. E.
  last_name: Hardin
- first_name: T. Y.Y.
  full_name: Hsiao, T. Y.Y.
  last_name: Hsiao
- first_name: A.
  full_name: Hutter, A.
  last_name: Hutter
- first_name: P.
  full_name: Jakobsson, P.
  last_name: Jakobsson
- first_name: M.
  full_name: Killi, M.
  last_name: Killi
- first_name: N.
  full_name: Khosravaninezhad, N.
  last_name: Khosravaninezhad
- first_name: P.
  full_name: Laursen, P.
  last_name: Laursen
- first_name: M. M.
  full_name: Lee, M. M.
  last_name: Lee
- first_name: G. E.
  full_name: Magdis, G. E.
  last_name: Magdis
- first_name: Jorryt J
  full_name: Matthee, Jorryt J
  id: 7439a258-f3c0-11ec-9501-9df22fe06720
  last_name: Matthee
  orcid: 0000-0003-2871-127X
- first_name: R. P.
  full_name: Naidu, R. P.
  last_name: Naidu
- first_name: D.
  full_name: Narayanan, D.
  last_name: Narayanan
- first_name: C.
  full_name: Pollock, C.
  last_name: Pollock
- first_name: M. K.M.
  full_name: Prescott, M. K.M.
  last_name: Prescott
- first_name: V.
  full_name: Rusakov, V.
  last_name: Rusakov
- first_name: M.
  full_name: Shuntov, M.
  last_name: Shuntov
- first_name: A.
  full_name: Sneppen, A.
  last_name: Sneppen
- first_name: R.
  full_name: Smit, R.
  last_name: Smit
- first_name: N. R.
  full_name: Tanvir, N. R.
  last_name: Tanvir
- first_name: C.
  full_name: Terp, C.
  last_name: Terp
- first_name: S.
  full_name: Toft, S.
  last_name: Toft
- first_name: F.
  full_name: Valentino, F.
  last_name: Valentino
- first_name: A. P.
  full_name: Vijayan, A. P.
  last_name: Vijayan
- first_name: J. R.
  full_name: Weaver, J. R.
  last_name: Weaver
- first_name: J. H.
  full_name: Wise, J. H.
  last_name: Wise
- first_name: J.
  full_name: Witstok, J.
  last_name: Witstok
citation:
  ama: 'Heintz KE, Brammer GB, Watson D, et al. The JWST-PRIMAL archival survey: A
    JWST/NIRSpec reference sample for the physical properties and Lyman-α absorption
    and emission of ∼600 galaxies at z = 5.0-13.4. <i>Astronomy &#38; Astrophysics</i>.
    2025;693. doi:<a href="https://doi.org/10.1051/0004-6361/202450243">10.1051/0004-6361/202450243</a>'
  apa: 'Heintz, K. E., Brammer, G. B., Watson, D., Oesch, P. A., Keating, L. C., Hayes,
    M. J., … Witstok, J. (2025). The JWST-PRIMAL archival survey: A JWST/NIRSpec reference
    sample for the physical properties and Lyman-α absorption and emission of ∼600
    galaxies at z = 5.0-13.4. <i>Astronomy &#38; Astrophysics</i>. EDP Sciences. <a
    href="https://doi.org/10.1051/0004-6361/202450243">https://doi.org/10.1051/0004-6361/202450243</a>'
  chicago: 'Heintz, K. E., G. B. Brammer, D. Watson, P. A. Oesch, L. C. Keating, M.
    J. Hayes, Unknown Abdurro’Uf, et al. “The JWST-PRIMAL Archival Survey: A JWST/NIRSpec
    Reference Sample for the Physical Properties and Lyman-α Absorption and Emission
    of ∼600 Galaxies at z = 5.0-13.4.” <i>Astronomy &#38; Astrophysics</i>. EDP Sciences,
    2025. <a href="https://doi.org/10.1051/0004-6361/202450243">https://doi.org/10.1051/0004-6361/202450243</a>.'
  ieee: 'K. E. Heintz <i>et al.</i>, “The JWST-PRIMAL archival survey: A JWST/NIRSpec
    reference sample for the physical properties and Lyman-α absorption and emission
    of ∼600 galaxies at z = 5.0-13.4,” <i>Astronomy &#38; Astrophysics</i>, vol. 693.
    EDP Sciences, 2025.'
  ista: 'Heintz KE, Brammer GB, Watson D, Oesch PA, Keating LC, Hayes MJ, Abdurro’Uf
    U, Arellano-Córdova KZ, Carnall AC, Christiansen CR, Cullen F, Davé R, Dayal P,
    Ferrara A, Finlator K, Fynbo JPU, Flury SR, Gelli V, Gillman S, Gottumukkala R,
    Gould K, Greve TR, Hardin SE, Hsiao TYY, Hutter A, Jakobsson P, Killi M, Khosravaninezhad
    N, Laursen P, Lee MM, Magdis GE, Matthee JJ, Naidu RP, Narayanan D, Pollock C,
    Prescott MKM, Rusakov V, Shuntov M, Sneppen A, Smit R, Tanvir NR, Terp C, Toft
    S, Valentino F, Vijayan AP, Weaver JR, Wise JH, Witstok J. 2025. The JWST-PRIMAL
    archival survey: A JWST/NIRSpec reference sample for the physical properties and
    Lyman-α absorption and emission of ∼600 galaxies at z = 5.0-13.4. Astronomy &#38;
    Astrophysics. 693, A60.'
  mla: 'Heintz, K. E., et al. “The JWST-PRIMAL Archival Survey: A JWST/NIRSpec Reference
    Sample for the Physical Properties and Lyman-α Absorption and Emission of ∼600
    Galaxies at z = 5.0-13.4.” <i>Astronomy &#38; Astrophysics</i>, vol. 693, A60,
    EDP Sciences, 2025, doi:<a href="https://doi.org/10.1051/0004-6361/202450243">10.1051/0004-6361/202450243</a>.'
  short: K.E. Heintz, G.B. Brammer, D. Watson, P.A. Oesch, L.C. Keating, M.J. Hayes,
    U. Abdurro’Uf, K.Z. Arellano-Córdova, A.C. Carnall, C.R. Christiansen, F. Cullen,
    R. Davé, P. Dayal, A. Ferrara, K. Finlator, J.P.U. Fynbo, S.R. Flury, V. Gelli,
    S. Gillman, R. Gottumukkala, K. Gould, T.R. Greve, S.E. Hardin, T.Y.Y. Hsiao,
    A. Hutter, P. Jakobsson, M. Killi, N. Khosravaninezhad, P. Laursen, M.M. Lee,
    G.E. Magdis, J.J. Matthee, R.P. Naidu, D. Narayanan, C. Pollock, M.K.M. Prescott,
    V. Rusakov, M. Shuntov, A. Sneppen, R. Smit, N.R. Tanvir, C. Terp, S. Toft, F.
    Valentino, A.P. Vijayan, J.R. Weaver, J.H. Wise, J. Witstok, Astronomy &#38; Astrophysics
    693 (2025).
date_created: 2025-01-19T23:01:52Z
date_published: 2025-01-06T00:00:00Z
date_updated: 2026-02-16T12:07:37Z
day: '06'
ddc:
- '520'
department:
- _id: JoMa
doi: 10.1051/0004-6361/202450243
external_id:
  isi:
  - '001390856800001'
file:
- access_level: open_access
  checksum: 67a791080ade9bfb449d249de2af7456
  content_type: application/pdf
  creator: dernst
  date_created: 2025-01-20T09:17:33Z
  date_updated: 2025-01-20T09:17:33Z
  file_id: '18858'
  file_name: 2025_AstronomyAstrophysics_Heintz.pdf
  file_size: 4513466
  relation: main_file
  success: 1
file_date_updated: 2025-01-20T09:17:33Z
has_accepted_license: '1'
intvolume: '       693'
isi: 1
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
publication: Astronomy & Astrophysics
publication_identifier:
  eissn:
  - 1432-0746
  issn:
  - 0004-6361
publication_status: published
publisher: EDP Sciences
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'The JWST-PRIMAL archival survey: A JWST/NIRSpec reference sample for the physical
  properties and Lyman-α absorption and emission of ∼600 galaxies at z = 5.0-13.4'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 693
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
_id: '18936'
abstract:
- lang: eng
  text: A major obstacle to predictive understanding of evolution stems from the complexity
    of biological systems, which prevents detailed characterization of key evolutionary
    properties. Here, we highlight some of the major sources of complexity that arise
    when relating molecular mechanisms to their evolutionary consequences and ask
    whether accounting for every mechanistic detail is important to accurately predict
    evolutionary outcomes. To do this, we developed a mechanistic model of a bacterial
    promoter regulated by 2 proteins, allowing us to connect any promoter genotype
    to 6 phenotypes that capture the dynamics of gene expression following an environmental
    switch. Accounting for the mechanisms that govern how this system works enabled
    us to provide an in-depth picture of how regulated bacterial promoters might evolve.
    More importantly, we used the model to explore which factors that contribute to
    the complexity of this system are essential for understanding its evolution, and
    which can be simplified without information loss. We found that several key evolutionary
    properties—the distribution of phenotypic and fitness effects of mutations, the
    evolutionary trajectories during selection for regulation—can be accurately captured
    without accounting for all, or even most, parameters of the system. Our findings
    point to the need for a mechanistic approach to studying evolution, as it enables
    tackling biological complexity and in doing so improves the ability to predict
    evolutionary outcomes.
acknowledgement: "The authors thank Nick Barton, Stepan Denisov, Claudia Igler, Srdjan
  Sarikas, Anna Staron, and the anonymous reviewers for useful comments and discussions
  that helped improve our work.\r\nFunding for this work was provided by the Wellcome
  Trust–Royal Society Sir Henry Dale Fellowship (216779/Z/19/Z) and the Royal Society
  Research Grant (RG\\R2\\232522) to M.L."
article_number: iyae191
article_processing_charge: Yes (in subscription journal)
article_type: original
author:
- first_name: Rok
  full_name: Grah, Rok
  id: 483E70DE-F248-11E8-B48F-1D18A9856A87
  last_name: Grah
  orcid: 0000-0003-2539-3560
- first_name: Calin C
  full_name: Guet, Calin C
  id: 47F8433E-F248-11E8-B48F-1D18A9856A87
  last_name: Guet
  orcid: 0000-0001-6220-2052
- first_name: Gašper
  full_name: Tkačik, Gašper
  id: 3D494DCA-F248-11E8-B48F-1D18A9856A87
  last_name: Tkačik
  orcid: 0000-0002-6699-1455
- first_name: Mato
  full_name: Lagator, Mato
  id: 345D25EC-F248-11E8-B48F-1D18A9856A87
  last_name: Lagator
citation:
  ama: 'Grah R, Guet CC, Tkačik G, Lagator M. Linking molecular mechanisms to their
    evolutionary consequences: a primer. <i>Genetics</i>. 2025;229(2). doi:<a href="https://doi.org/10.1093/genetics/iyae191">10.1093/genetics/iyae191</a>'
  apa: 'Grah, R., Guet, C. C., Tkačik, G., &#38; Lagator, M. (2025). Linking molecular
    mechanisms to their evolutionary consequences: a primer. <i>Genetics</i>. Oxford
    University Press. <a href="https://doi.org/10.1093/genetics/iyae191">https://doi.org/10.1093/genetics/iyae191</a>'
  chicago: 'Grah, Rok, Calin C Guet, Gašper Tkačik, and Mato Lagator. “Linking Molecular
    Mechanisms to Their Evolutionary Consequences: A Primer.” <i>Genetics</i>. Oxford
    University Press, 2025. <a href="https://doi.org/10.1093/genetics/iyae191">https://doi.org/10.1093/genetics/iyae191</a>.'
  ieee: 'R. Grah, C. C. Guet, G. Tkačik, and M. Lagator, “Linking molecular mechanisms
    to their evolutionary consequences: a primer,” <i>Genetics</i>, vol. 229, no.
    2. Oxford University Press, 2025.'
  ista: 'Grah R, Guet CC, Tkačik G, Lagator M. 2025. Linking molecular mechanisms
    to their evolutionary consequences: a primer. Genetics. 229(2), iyae191.'
  mla: 'Grah, Rok, et al. “Linking Molecular Mechanisms to Their Evolutionary Consequences:
    A Primer.” <i>Genetics</i>, vol. 229, no. 2, iyae191, Oxford University Press,
    2025, doi:<a href="https://doi.org/10.1093/genetics/iyae191">10.1093/genetics/iyae191</a>.'
  short: R. Grah, C.C. Guet, G. Tkačik, M. Lagator, Genetics 229 (2025).
corr_author: '1'
date_created: 2025-01-29T08:21:35Z
date_published: 2025-02-01T00:00:00Z
date_updated: 2025-05-19T14:08:02Z
day: '01'
ddc:
- '570'
department:
- _id: CaGu
- _id: GaTk
doi: 10.1093/genetics/iyae191
external_id:
  isi:
  - '001379194200001'
  pmid:
  - '39601269'
file:
- access_level: open_access
  checksum: f730e416795969449ef49d97b82ac494
  content_type: application/pdf
  creator: dernst
  date_created: 2025-04-16T09:41:04Z
  date_updated: 2025-04-16T09:41:04Z
  file_id: '19580'
  file_name: 2025_Genetics_Grah.pdf
  file_size: 1511688
  relation: main_file
  success: 1
file_date_updated: 2025-04-16T09:41:04Z
has_accepted_license: '1'
intvolume: '       229'
isi: 1
issue: '2'
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
pmid: 1
publication: Genetics
publication_identifier:
  eissn:
  - 1943-2631
publication_status: published
publisher: Oxford University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Linking molecular mechanisms to their evolutionary consequences: a primer'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 229
year: '2025'
...
---
OA_place: publisher
_id: '19025'
abstract:
- lang: eng
  text: 'A complete understanding of the central stars of planetary nebulae (CSPNe)
    remains elusive. Over the past several decades, time-series photometry of CSPNe
    has yielded significant results including, but not limited to, discoveries of
    nearly 100 binary systems, insights into pulsations and winds in young white dwarfs,
    and studies of stars undergoing very late thermal pulses. We have undertaken a
    systematic study of optical photometric variability of cataloged CSPNe, using
    the light curves from the Zwicky Transient Facility (ZTF). By applying appropriate
    variability metrics, we arrive at a list of 94 highly variable CSPN candidates.
    Based on the timescales of the light-curve activity, we classify the variables
    broadly into short- and long-timescale variables. In this first paper in this
    series, we focus on the former, which is the majority class comprising 83 objects.
    We report periods for six sources for the first time, and recover several known
    periodic variables. Among the aperiodic sources, most exhibit a jitter around
    a median flux with a stable amplitude, and a few show outbursts. We draw attention
    to WeSb 1, which shows a different kind of variability: prominent deep and aperiodic
    dips, resembling transits from a dust/debris disk. We find strong evidence for
    a binary nature of WeSb 1 (possibly an F-type subgiant companion). The compactness
    of the emission lines and inferred high electron densities make WeSb 1 a candidate
    for either an EGB 6-type planetary nucleus, or a symbiotic system inside an evolved
    planetary nebula, both of which are rare objects. To demonstrate further promise
    with ZTF, we report three additional newly identified periodic sources that do
    not appear in the list of highly variable sources. Finally, we also introduce
    a two-dimensional metric space defined by the von Neumann statistics and Pearson
    Skew and demonstrate its effectiveness in identifying unique variables of astrophysical
    interest, like WeSb 1.'
acknowledgement: "This work is based on observations obtained with the Samuel Oschin
  Telescope 48 inch and the 60 inch Telescope at the Palomar Observatory as part of
  the Zwicky Transient Facility project. ZTF is supported by the National Science
  Foundation under grants No. AST-1440341 and AST-2034437 and a collaboration including
  current partners Caltech, IPAC, the Oskar Klein Center at Stockholm University,
  the University of Maryland, University of California, Berkeley, the University of
  Wisconsin at Milwaukee, University of Warwick, Ruhr University Bochum, Cornell University,
  Northwestern University, and Drexel University. Operations are conducted by COO,
  IPAC, and UW.\r\n\r\nThis work has made use of data from the European Space Agency
  (ESA) mission Gaia (https://www.cosmos.esa.int/gaia), processed by the Gaia Data
  Processing and Analysis Consortium (DPAC; https://www.cosmos.esa.int/web/gaia/dpac/consortium).
  Funding for the DPAC has been provided by national institutions, in particular,
  the institutions participating in the Gaia Multilateral Agreement.\r\n\r\nWe are
  grateful to the staffs of Palomar Observatory and the Hobby-Eberly Telescope for
  assistance with the observations and data management. The Liverpool Telescope is
  operated on the island of La Palma by Liverpool John Moores University in the Spanish
  Observatorio del Roque de los Muchachos of the Instituto de Astrofisica de Canarias
  with financial support from the UK Science and Technology Facilities Council.\r\n\r\nThe
  Low-Resolution Spectrograph 2 (LRS2) on HET was developed and funded by the University
  of Texas at Austin McDonald Observatory and Department of Astronomy, and by Pennsylvania
  State University. We thank the Leibniz-Institut für Astrophysik Potsdam (AIP) and
  the Institut für Astrophysik Göttingen (IAG) for their contributions to the construction
  of the integral field units. We acknowledge the Texas Advanced Computing Center
  (TACC) at The University of Texas at Austin for providing high performance computing,
  visualization, and storage resources that have contributed to the results reported
  within this paper.\r\n\r\nWe thank the anonymous referee for the detailed comments,
  which improved the clarity of the manuscript significantly. We also thank Gunter
  Cibis for pointing out typographical errors in the names of a few PNe in the first
  draft. S.B. expresses gratitude to Kishalay De for providing the Gattini-IR and
  WISE data. S.B. thanks Frank J. Masci and Zachary P. Vanderbosch for useful discussions
  and suggestions regarding solving the issues with ZTF forced photometry on extended
  sources. S.B. also thanks Jim Fuller, Charles C. Steidel, Lynne Hillenbrand, and
  Adolfo Carvalho for useful discussions on methods and science. S.B. also thanks
  David O. Cook for providing access to his CLU image cutout service to generate the
  WeSb 1 image. S.B. acknowledges the financial support from the Wallace L. W. Sargent
  Graduate Fellowship during the first year of his graduate studies at Caltech. N.C.
  was supported through the Cancer Research UK grant A24042. S.B. thanks Martina Veresvarka
  for drawing our attention to the TESS light curves of WeSb 1.\r\n\r\nWe have used
  Python packages Numpy (Harris et al. 2020), SciPy (Virtanen et al. 2020), Matplotlib
  (Hunter 2007), Pandas (pandas development team 2020), Astropy (Astropy Collaboration
  et al. 2013, 2018), and Astroquery (Ginsburg et al. 2019) at various stages of this
  research."
article_number: '024201'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Soumyadeep
  full_name: Bhattacharjee, Soumyadeep
  last_name: Bhattacharjee
- first_name: S. R.
  full_name: Kulkarni, S. R.
  last_name: Kulkarni
- first_name: Albert K.H.
  full_name: Kong, Albert K.H.
  last_name: Kong
- first_name: M. S.
  full_name: Tam, M. S.
  last_name: Tam
- first_name: Howard E.
  full_name: Bond, Howard E.
  last_name: Bond
- first_name: Kareem
  full_name: El-Badry, Kareem
  last_name: El-Badry
- first_name: Ilaria
  full_name: Caiazzo, Ilaria
  id: 8ae5b6e7-2a03-11ee-914d-b58ed7a3b47d
  last_name: Caiazzo
  orcid: 0000-0002-4770-5388
- first_name: Nicholas
  full_name: Chornay, Nicholas
  last_name: Chornay
- first_name: Matthew J.
  full_name: Graham, Matthew J.
  last_name: Graham
- first_name: Antonio C.
  full_name: Rodriguez, Antonio C.
  last_name: Rodriguez
- first_name: Gregory R.
  full_name: Zeimann, Gregory R.
  last_name: Zeimann
- first_name: Christoffer
  full_name: Fremling, Christoffer
  last_name: Fremling
- first_name: Andrew J.
  full_name: Drake, Andrew J.
  last_name: Drake
- first_name: Klaus
  full_name: Werner, Klaus
  last_name: Werner
- first_name: Hector
  full_name: Rodriguez, Hector
  last_name: Rodriguez
- first_name: Thomas A.
  full_name: Prince, Thomas A.
  last_name: Prince
- first_name: Russ R.
  full_name: Laher, Russ R.
  last_name: Laher
- first_name: Tracy X.
  full_name: Chen, Tracy X.
  last_name: Chen
- first_name: Reed
  full_name: Riddle, Reed
  last_name: Riddle
citation:
  ama: Bhattacharjee S, Kulkarni SR, Kong AKH, et al. Variability of central stars
    of planetary nebulae with the zwicky transient facility. I. Methods, short-timescale
    variables, and the unusual nucleus of WeSb 1. <i>Publications of the Astronomical
    Society of the Pacific</i>. 2025;137(2). doi:<a href="https://doi.org/10.1088/1538-3873/ada702">10.1088/1538-3873/ada702</a>
  apa: Bhattacharjee, S., Kulkarni, S. R., Kong, A. K. H., Tam, M. S., Bond, H. E.,
    El-Badry, K., … Riddle, R. (2025). Variability of central stars of planetary nebulae
    with the zwicky transient facility. I. Methods, short-timescale variables, and
    the unusual nucleus of WeSb 1. <i>Publications of the Astronomical Society of
    the Pacific</i>. IOP Publishing. <a href="https://doi.org/10.1088/1538-3873/ada702">https://doi.org/10.1088/1538-3873/ada702</a>
  chicago: Bhattacharjee, Soumyadeep, S. R. Kulkarni, Albert K.H. Kong, M. S. Tam,
    Howard E. Bond, Kareem El-Badry, Ilaria Caiazzo, et al. “Variability of Central
    Stars of Planetary Nebulae with the Zwicky Transient Facility. I. Methods, Short-Timescale
    Variables, and the Unusual Nucleus of WeSb 1.” <i>Publications of the Astronomical
    Society of the Pacific</i>. IOP Publishing, 2025. <a href="https://doi.org/10.1088/1538-3873/ada702">https://doi.org/10.1088/1538-3873/ada702</a>.
  ieee: S. Bhattacharjee <i>et al.</i>, “Variability of central stars of planetary
    nebulae with the zwicky transient facility. I. Methods, short-timescale variables,
    and the unusual nucleus of WeSb 1,” <i>Publications of the Astronomical Society
    of the Pacific</i>, vol. 137, no. 2. IOP Publishing, 2025.
  ista: Bhattacharjee S, Kulkarni SR, Kong AKH, Tam MS, Bond HE, El-Badry K, Caiazzo
    I, Chornay N, Graham MJ, Rodriguez AC, Zeimann GR, Fremling C, Drake AJ, Werner
    K, Rodriguez H, Prince TA, Laher RR, Chen TX, Riddle R. 2025. Variability of central
    stars of planetary nebulae with the zwicky transient facility. I. Methods, short-timescale
    variables, and the unusual nucleus of WeSb 1. Publications of the Astronomical
    Society of the Pacific. 137(2), 024201.
  mla: Bhattacharjee, Soumyadeep, et al. “Variability of Central Stars of Planetary
    Nebulae with the Zwicky Transient Facility. I. Methods, Short-Timescale Variables,
    and the Unusual Nucleus of WeSb 1.” <i>Publications of the Astronomical Society
    of the Pacific</i>, vol. 137, no. 2, 024201, IOP Publishing, 2025, doi:<a href="https://doi.org/10.1088/1538-3873/ada702">10.1088/1538-3873/ada702</a>.
  short: S. Bhattacharjee, S.R. Kulkarni, A.K.H. Kong, M.S. Tam, H.E. Bond, K. El-Badry,
    I. Caiazzo, N. Chornay, M.J. Graham, A.C. Rodriguez, G.R. Zeimann, C. Fremling,
    A.J. Drake, K. Werner, H. Rodriguez, T.A. Prince, R.R. Laher, T.X. Chen, R. Riddle,
    Publications of the Astronomical Society of the Pacific 137 (2025).
date_created: 2025-02-16T23:02:33Z
date_published: 2025-02-01T00:00:00Z
date_updated: 2025-09-30T10:32:17Z
day: '01'
ddc:
- '520'
department:
- _id: IlCa
doi: 10.1088/1538-3873/ada702
external_id:
  arxiv:
  - '2410.03589'
  isi:
  - '001416903300001'
file:
- access_level: open_access
  checksum: 42b942ee1bf32ed225024e168174be92
  content_type: application/pdf
  creator: dernst
  date_created: 2025-02-17T09:13:41Z
  date_updated: 2025-02-17T09:13:41Z
  file_id: '19034'
  file_name: 2025_PASP_Bhattacharjee.pdf
  file_size: 3657568
  relation: main_file
  success: 1
file_date_updated: 2025-02-17T09:13:41Z
has_accepted_license: '1'
intvolume: '       137'
isi: 1
issue: '2'
language:
- iso: eng
license: https://creativecommons.org/licenses/by/3.0/
month: '02'
oa: 1
oa_version: Published Version
publication: Publications of the Astronomical Society of the Pacific
publication_identifier:
  issn:
  - 0004-6280
  issnl:
  - 0004-6280
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
related_material:
  link:
  - relation: erratum
    url: https://doi.org/10.1088/1538-3873/adbcd8
scopus_import: '1'
status: public
title: Variability of central stars of planetary nebulae with the zwicky transient
  facility. I. Methods, short-timescale variables, and the unusual nucleus of WeSb
  1
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/3.0/legalcode
  name: Creative Commons Attribution 3.0 Unported (CC BY 3.0)
  short: CC BY (3.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 137
year: '2025'
...
---
OA_type: closed access
_id: '19075'
abstract:
- lang: eng
  text: Thermoelectric (TE) materials can convert the heat produced during biochemical
    reactions into electrical signals, enabling the self-powered detection of biomarkers.
    In this work, we design and fabricate a simple Ag2Se nanofilm-based TE biosensor
    to precisely quantify hydrogen peroxide (H2O2) levels in liquid samples. A chemical
    reaction involving horseradish peroxidase, ABTS and H2O2 in the specimens produces
    a photothermal agent—ABTS (2,2′-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid))
    free radical, which triggers the heat fluctuations at the TE sensor through the
    photo-thermal effect, eventually enabling the sensing of H2O2. Consequently, the
    constructed sensor can achieve a detection limit of 0.26 μM by a three-leg TE
    device design. Further investigations suggest that the application of our TE sensor
    can be extended in testing H2O2 in beverages (including milk, soda water, and
    lemonade) and evaluating the load of bacterial pathogens relevant to dental diseases
    and infections including Streptococcus sanguinis and Methicillin-resistant Staphylococcus
    aureus with high analytical accuracy. This strategy utilizes the combination of
    high thermoelectric performance with chemical reactions to realize a straightforward
    and accurate biomarker detection method, making it suitable for applications in
    medical diagnostics, personalized health monitoring, and the food industry.
acknowledgement: This work was supported by the Sichuan Science and Technology Program
  (Grant No. 2023YFG0220, 2023ZYD0064, and 2024YFHZ0309) and the Fundamental Research
  Funds for the Central Universities and Research Funding from West China School/Hospital
  of Stomatology Sichuan University, No. QDJF2022-2.
article_processing_charge: No
article_type: original
author:
- first_name: Huangshui
  full_name: Ma, Huangshui
  last_name: Ma
- first_name: Shiyu
  full_name: Pu, Shiyu
  last_name: Pu
- first_name: Shiyu
  full_name: Jia, Shiyu
  last_name: Jia
- first_name: Shengduo
  full_name: Xu, Shengduo
  id: 12ab8624-4c8a-11ec-9e11-e1ac2438f22f
  last_name: Xu
- first_name: Qiwei
  full_name: Yu, Qiwei
  last_name: Yu
- first_name: Lei
  full_name: Yang, Lei
  last_name: Yang
- first_name: Hao
  full_name: Wu, Hao
  last_name: Wu
- first_name: Qiang
  full_name: Sun, Qiang
  last_name: Sun
citation:
  ama: Ma H, Pu S, Jia S, et al. Laser-assisted thermoelectric-enhanced hydrogen peroxide
    biosensors based on Ag2Se nanofilms for sensitive detection of bacterial pathogens.
    <i>Nanoscale</i>. 2025;17(10):5858-5868. doi:<a href="https://doi.org/10.1039/d4nr04860a">10.1039/d4nr04860a</a>
  apa: Ma, H., Pu, S., Jia, S., Xu, S., Yu, Q., Yang, L., … Sun, Q. (2025). Laser-assisted
    thermoelectric-enhanced hydrogen peroxide biosensors based on Ag2Se nanofilms
    for sensitive detection of bacterial pathogens. <i>Nanoscale</i>. Royal Society
    of Chemistry. <a href="https://doi.org/10.1039/d4nr04860a">https://doi.org/10.1039/d4nr04860a</a>
  chicago: Ma, Huangshui, Shiyu Pu, Shiyu Jia, Shengduo Xu, Qiwei Yu, Lei Yang, Hao
    Wu, and Qiang Sun. “Laser-Assisted Thermoelectric-Enhanced Hydrogen Peroxide Biosensors
    Based on Ag2Se Nanofilms for Sensitive Detection of Bacterial Pathogens.” <i>Nanoscale</i>.
    Royal Society of Chemistry, 2025. <a href="https://doi.org/10.1039/d4nr04860a">https://doi.org/10.1039/d4nr04860a</a>.
  ieee: H. Ma <i>et al.</i>, “Laser-assisted thermoelectric-enhanced hydrogen peroxide
    biosensors based on Ag2Se nanofilms for sensitive detection of bacterial pathogens,”
    <i>Nanoscale</i>, vol. 17, no. 10. Royal Society of Chemistry, pp. 5858–5868,
    2025.
  ista: Ma H, Pu S, Jia S, Xu S, Yu Q, Yang L, Wu H, Sun Q. 2025. Laser-assisted thermoelectric-enhanced
    hydrogen peroxide biosensors based on Ag2Se nanofilms for sensitive detection
    of bacterial pathogens. Nanoscale. 17(10), 5858–5868.
  mla: Ma, Huangshui, et al. “Laser-Assisted Thermoelectric-Enhanced Hydrogen Peroxide
    Biosensors Based on Ag2Se Nanofilms for Sensitive Detection of Bacterial Pathogens.”
    <i>Nanoscale</i>, vol. 17, no. 10, Royal Society of Chemistry, 2025, pp. 5858–68,
    doi:<a href="https://doi.org/10.1039/d4nr04860a">10.1039/d4nr04860a</a>.
  short: H. Ma, S. Pu, S. Jia, S. Xu, Q. Yu, L. Yang, H. Wu, Q. Sun, Nanoscale 17
    (2025) 5858–5868.
date_created: 2025-02-23T23:01:57Z
date_published: 2025-03-14T00:00:00Z
date_updated: 2025-09-30T10:38:50Z
day: '14'
department:
- _id: MaIb
doi: 10.1039/d4nr04860a
external_id:
  isi:
  - '001416656400001'
  pmid:
  - '39927897'
intvolume: '        17'
isi: 1
issue: '10'
language:
- iso: eng
month: '03'
oa_version: None
page: 5858-5868
pmid: 1
publication: Nanoscale
publication_identifier:
  eissn:
  - 2040-3372
  issn:
  - 2040-3364
publication_status: published
publisher: Royal Society of Chemistry
quality_controlled: '1'
scopus_import: '1'
status: public
title: Laser-assisted thermoelectric-enhanced hydrogen peroxide biosensors based on
  Ag2Se nanofilms for sensitive detection of bacterial pathogens
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 17
year: '2025'
...
---
OA_place: publisher
OA_type: diamond
_id: '19284'
abstract:
- lang: eng
  text: The Hα nebular emission line is an optimal tracer for recent star formation
    in galaxies. With the advent of JWST, this line has recently become observable
    at z > 3 for the first time. We present a catalog of 1050 Hα emitters at 3.7 < z < 6.7
    in the GOODS fields obtained from a blind search in JWST NIRCam/grism data. We
    made use of the FRESCO survey’s 124 arcmin2 of observations in GOODS-North and
    GOODS-South with the F444W filter, probing Hα at 4.9 < z < 6.7, and the CONGRESS
    survey’s 62 arcmin2 of observations in GOODS-North with F356W, probing Hα at 3.8 < z < 5.1.
    We found an overdensity with 98 sources at z ∼ 4.4 in GOODS-N, and confirmed previously
    reported overdensities at z ∼ 5.2 in GOODS-N and at z ∼ 5.4 and z ∼ 5.9 in GOODS-S.
    We computed the observed Hα luminosity functions (LFs) in three bins centered
    at z ∼ 4.45, 5.30, and 6.15, which are the first such measurements at z > 3 obtained
    based purely on spectroscopic data, robustly tracing galaxy star formation rates
    (SFRs) beyond the peak of the cosmic star formation history. We compared our results
    with theoretical predictions from three different simulations and found good agreement
    at z ∼ 4 − 6. The UV LFs of this spectroscopically confirmed sample are in good
    agreement with pre-JWST measurements obtained with photometrically selected objects.
    Finally, we derived SFR functions and integrated them to compute the evolution
    of the cosmic SFR densities across z ∼ 4 − 6, finding values in good agreement
    with recent UV estimates from Lyman-break galaxies, which imply a continuous decrease
    in SFR density by a factor of three over z ∼ 4 to z ∼ 6. Our work shows the power
    of NIRCam grism observations to efficiently provide new tests for early galaxy
    formation models based on emission line statistics.
acknowledgement: 'This work is based on observations made with the NASA/ESA/CSA James
  Webb Space Telescope. The data were obtained from the Mikulski Archive for Space
  Telescopes at the Space Telescope Science Institute, which is operated by the Association
  of Universities for Research in Astronomy, Inc., under NASA contract NAS 5-03127
  for JWST. These observations are associated with program Nos. 1895 and 3577. The
  authors sincerely thank the CONGRESS team (PIs: Egami & Sun) for developing their
  observing program with a zero-exclusive-access period. We thank Aswin Vijayan and
  Harley Katz for their help in analyzing the simulation data from FLARES and SPHINX.
  This work has received funding from the Swiss State Secretariat for Education, Research,
  and Innovation (SERI) under contract number MB22.00072, as well as from the Swiss
  National Science Foundation (SNSF) through project grant 200020_207349. The Cosmic
  Dawn Center (DAWN) is funded by the Danish National Research Foundation under grant
  DNRF140. Support for program #1895 was provided by NASA through a grant from the
  Space Telescope Science Institute, which is operated by the Association of Universities
  for Research in Astronomy, Inc., under NASA contract NAS 5-03127. Support for this
  work for RPN was provided by NASA through the NASA Hubble Fellowship grant HST-HF2-51515.001-A
  awarded by the Space Telescope Science Institute, which is operated by the Association
  of Universities for Research in Astronomy, Incorporated, under NASA contract NAS5-26555.
  MS acknowledges support from the European Research Commission Consolidator Grant
  101088789 (SFEER), from the CIDEGENT/2021/059 grant by Generalitat Valenciana, and
  from project PID2023-149420NB-I00 funded by MICIU/AEI/10.13039/501100011033 and
  by ERDF/EU.'
article_number: A178
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Alba
  full_name: Covelo-Paz, Alba
  last_name: Covelo-Paz
- first_name: Emma
  full_name: Giovinazzo, Emma
  last_name: Giovinazzo
- first_name: Pascal A.
  full_name: Oesch, Pascal A.
  last_name: Oesch
- first_name: Romain A.
  full_name: Meyer, Romain A.
  last_name: Meyer
- first_name: Andrea
  full_name: Weibel, Andrea
  last_name: Weibel
- first_name: Gabriel
  full_name: Brammer, Gabriel
  last_name: Brammer
- first_name: Yoshinobu
  full_name: Fudamoto, Yoshinobu
  last_name: Fudamoto
- first_name: Josephine
  full_name: Kerutt, Josephine
  last_name: Kerutt
- first_name: Jamie
  full_name: Lin, Jamie
  last_name: Lin
- first_name: Jasleen
  full_name: Matharu, Jasleen
  last_name: Matharu
- first_name: Rohan P.
  full_name: Naidu, Rohan P.
  last_name: Naidu
- first_name: Anna
  full_name: Velichko, Anna
  last_name: Velichko
- first_name: Victoria
  full_name: Bollo, Victoria
  last_name: Bollo
- first_name: Rychard
  full_name: Bouwens, Rychard
  last_name: Bouwens
- first_name: John
  full_name: Chisholm, John
  last_name: Chisholm
- first_name: Garth D.
  full_name: Illingworth, Garth D.
  last_name: Illingworth
- first_name: Ivan
  full_name: Kramarenko, Ivan
  id: 9a9394cb-3200-11ee-973b-f5ba2a8b16e4
  last_name: Kramarenko
  orcid: 0000-0001-5346-6048
- first_name: Daniel
  full_name: Magee, Daniel
  last_name: Magee
- first_name: Michael
  full_name: Maseda, Michael
  last_name: Maseda
- first_name: Jorryt J
  full_name: Matthee, Jorryt J
  id: 7439a258-f3c0-11ec-9501-9df22fe06720
  last_name: Matthee
  orcid: 0000-0003-2871-127X
- first_name: Erica
  full_name: Nelson, Erica
  last_name: Nelson
- first_name: Naveen
  full_name: Reddy, Naveen
  last_name: Reddy
- first_name: Daniel
  full_name: Schaerer, Daniel
  last_name: Schaerer
- first_name: Mauro
  full_name: Stefanon, Mauro
  last_name: Stefanon
- first_name: Mengyuan
  full_name: Xiao, Mengyuan
  last_name: Xiao
citation:
  ama: 'Covelo-Paz A, Giovinazzo E, Oesch PA, et al. An Hα view of galaxy buildup
    in the first 2 Gyr: Luminosity functions at z ∼ 4−6.5 from NIRCam/grism spectroscopy.
    <i>Astronomy &#38; Astrophysics</i>. 2025;694. doi:<a href="https://doi.org/10.1051/0004-6361/202452363">10.1051/0004-6361/202452363</a>'
  apa: 'Covelo-Paz, A., Giovinazzo, E., Oesch, P. A., Meyer, R. A., Weibel, A., Brammer,
    G., … Xiao, M. (2025). An Hα view of galaxy buildup in the first 2 Gyr: Luminosity
    functions at z ∼ 4−6.5 from NIRCam/grism spectroscopy. <i>Astronomy &#38; Astrophysics</i>.
    EDP Sciences. <a href="https://doi.org/10.1051/0004-6361/202452363">https://doi.org/10.1051/0004-6361/202452363</a>'
  chicago: 'Covelo-Paz, Alba, Emma Giovinazzo, Pascal A. Oesch, Romain A. Meyer, Andrea
    Weibel, Gabriel Brammer, Yoshinobu Fudamoto, et al. “An Hα View of Galaxy Buildup
    in the First 2 Gyr: Luminosity Functions at z ∼ 4−6.5 from NIRCam/Grism Spectroscopy.”
    <i>Astronomy &#38; Astrophysics</i>. EDP Sciences, 2025. <a href="https://doi.org/10.1051/0004-6361/202452363">https://doi.org/10.1051/0004-6361/202452363</a>.'
  ieee: 'A. Covelo-Paz <i>et al.</i>, “An Hα view of galaxy buildup in the first 2
    Gyr: Luminosity functions at z ∼ 4−6.5 from NIRCam/grism spectroscopy,” <i>Astronomy
    &#38; Astrophysics</i>, vol. 694. EDP Sciences, 2025.'
  ista: 'Covelo-Paz A, Giovinazzo E, Oesch PA, Meyer RA, Weibel A, Brammer G, Fudamoto
    Y, Kerutt J, Lin J, Matharu J, Naidu RP, Velichko A, Bollo V, Bouwens R, Chisholm
    J, Illingworth GD, Kramarenko I, Magee D, Maseda M, Matthee JJ, Nelson E, Reddy
    N, Schaerer D, Stefanon M, Xiao M. 2025. An Hα view of galaxy buildup in the first
    2 Gyr: Luminosity functions at z ∼ 4−6.5 from NIRCam/grism spectroscopy. Astronomy
    &#38; Astrophysics. 694, A178.'
  mla: 'Covelo-Paz, Alba, et al. “An Hα View of Galaxy Buildup in the First 2 Gyr:
    Luminosity Functions at z ∼ 4−6.5 from NIRCam/Grism Spectroscopy.” <i>Astronomy
    &#38; Astrophysics</i>, vol. 694, A178, EDP Sciences, 2025, doi:<a href="https://doi.org/10.1051/0004-6361/202452363">10.1051/0004-6361/202452363</a>.'
  short: A. Covelo-Paz, E. Giovinazzo, P.A. Oesch, R.A. Meyer, A. Weibel, G. Brammer,
    Y. Fudamoto, J. Kerutt, J. Lin, J. Matharu, R.P. Naidu, A. Velichko, V. Bollo,
    R. Bouwens, J. Chisholm, G.D. Illingworth, I. Kramarenko, D. Magee, M. Maseda,
    J.J. Matthee, E. Nelson, N. Reddy, D. Schaerer, M. Stefanon, M. Xiao, Astronomy
    &#38; Astrophysics 694 (2025).
date_created: 2025-03-02T23:01:54Z
date_published: 2025-02-12T00:00:00Z
date_updated: 2026-02-16T12:08:59Z
day: '12'
ddc:
- '520'
department:
- _id: JoMa
doi: 10.1051/0004-6361/202452363
external_id:
  arxiv:
  - '2409.17241'
  isi:
  - '001420194600001'
file:
- access_level: open_access
  checksum: b1e74644a0cd37550e9a553f8675c93f
  content_type: application/pdf
  creator: dernst
  date_created: 2025-03-04T09:29:01Z
  date_updated: 2025-03-04T09:29:01Z
  file_id: '19285'
  file_name: 2025_AstronomyAstrophysics_CoveloPaz.pdf
  file_size: 1865856
  relation: main_file
  success: 1
file_date_updated: 2025-03-04T09:29:01Z
has_accepted_license: '1'
intvolume: '       694'
isi: 1
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
publication: Astronomy & Astrophysics
publication_identifier:
  eissn:
  - 1432-0746
  issn:
  - 0004-6361
publication_status: published
publisher: EDP Sciences
quality_controlled: '1'
related_material:
  link:
  - relation: software
    url: ' https://github.com/astroalba/fresco'
scopus_import: '1'
status: public
title: 'An Hα view of galaxy buildup in the first 2 Gyr: Luminosity functions at z
  ∼ 4−6.5 from NIRCam/grism spectroscopy'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 694
year: '2025'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
_id: '19366'
abstract:
- lang: eng
  text: Staphylococcus aureus (S. aureus) is one of the most common causative agents
    of mammary gland infection and mastitis, but the specific role of S. aureus-derived
    extracellular vesicles (SaEVs) in mastitis has been poorly studied to date. Here,
    we aimed to investigate the response of bovine monocyte-derived macrophages (boMdM)
    to SaEVs of the genotype B (GTB) mastitis-related strain M5512B. Specifically,
    we evaluated the effects on the actin cytoskeleton, gene expression, and the SaEV
    proteomic cargo. Furthermore, we assessed to what extent the cellular and molecular
    response of boMdM to SaEVs differed from peripheral mononuclear blood cells (PBMCs)
    used for in vitro derivation of the former. We observed that SaEVs induced morphological
    changes in boMdM, leading to a pro-inflammatory and pyroptosis-related increased
    gene expression. Additionally, our study revealed that boMdM and PBMCs exhibited
    stimulus-specific differing responses. The proteomic analysis of SaEVs identified
    clusters of proteins related to virulence and antibiotic resistance, supporting
    the theory that S. aureus might use EVs to evade host defences and colonize the
    mammary gland. Our results bring new insights into how SaEVs might impact the
    host during an S. aureus infection, which can be useful for future S. aureus vaccine
    development.
acknowledgement: "The authors thank Michele Guastalla for his contributions to the
  boMdM analyses and Stephan Handschin from the Scientific Center for Optical and
  Electron Microscopy (ScopeM) of ETH Zurich for the TEM imaging. We gratefully acknowledge
  the Functional Genomics Center Zurich (FGCZ) for performing the mass spectrometry
  analysis for this study.\r\nOpen access funding provided by Swiss Federal Institute
  of Technology Zurich. This work was supported by basic funding from ETH Zurich."
article_processing_charge: Yes
article_type: original
author:
- first_name: Mara D.
  full_name: Saenz-De-Juano, Mara D.
  last_name: Saenz-De-Juano
- first_name: Giulia
  full_name: Silvestrelli, Giulia
  id: 12632ae8-799e-11ef-94a2-e5a3b5ef49e9
  last_name: Silvestrelli
- first_name: Samuel
  full_name: Buri, Samuel
  last_name: Buri
- first_name: Léa V.
  full_name: Zinsli, Léa V.
  last_name: Zinsli
- first_name: Mathias
  full_name: Schmelcher, Mathias
  last_name: Schmelcher
- first_name: Susanne E.
  full_name: Ulbrich, Susanne E.
  last_name: Ulbrich
citation:
  ama: Saenz-De-Juano MD, Silvestrelli G, Buri S, Zinsli LV, Schmelcher M, Ulbrich
    SE. Mastitis-related Staphylococcus aureus-derived extracellular vesicles induce
    a pro-inflammatory response in bovine monocyte-derived macrophages. <i>Scientific
    Reports</i>. 2025;15:6059. doi:<a href="https://doi.org/10.1038/s41598-025-90466-6">10.1038/s41598-025-90466-6</a>
  apa: Saenz-De-Juano, M. D., Silvestrelli, G., Buri, S., Zinsli, L. V., Schmelcher,
    M., &#38; Ulbrich, S. E. (2025). Mastitis-related Staphylococcus aureus-derived
    extracellular vesicles induce a pro-inflammatory response in bovine monocyte-derived
    macrophages. <i>Scientific Reports</i>. Springer Nature. <a href="https://doi.org/10.1038/s41598-025-90466-6">https://doi.org/10.1038/s41598-025-90466-6</a>
  chicago: Saenz-De-Juano, Mara D., Giulia Silvestrelli, Samuel Buri, Léa V. Zinsli,
    Mathias Schmelcher, and Susanne E. Ulbrich. “Mastitis-Related Staphylococcus Aureus-Derived
    Extracellular Vesicles Induce a pro-Inflammatory Response in Bovine Monocyte-Derived
    Macrophages.” <i>Scientific Reports</i>. Springer Nature, 2025. <a href="https://doi.org/10.1038/s41598-025-90466-6">https://doi.org/10.1038/s41598-025-90466-6</a>.
  ieee: M. D. Saenz-De-Juano, G. Silvestrelli, S. Buri, L. V. Zinsli, M. Schmelcher,
    and S. E. Ulbrich, “Mastitis-related Staphylococcus aureus-derived extracellular
    vesicles induce a pro-inflammatory response in bovine monocyte-derived macrophages,”
    <i>Scientific Reports</i>, vol. 15. Springer Nature, p. 6059, 2025.
  ista: Saenz-De-Juano MD, Silvestrelli G, Buri S, Zinsli LV, Schmelcher M, Ulbrich
    SE. 2025. Mastitis-related Staphylococcus aureus-derived extracellular vesicles
    induce a pro-inflammatory response in bovine monocyte-derived macrophages. Scientific
    Reports. 15, 6059.
  mla: Saenz-De-Juano, Mara D., et al. “Mastitis-Related Staphylococcus Aureus-Derived
    Extracellular Vesicles Induce a pro-Inflammatory Response in Bovine Monocyte-Derived
    Macrophages.” <i>Scientific Reports</i>, vol. 15, Springer Nature, 2025, p. 6059,
    doi:<a href="https://doi.org/10.1038/s41598-025-90466-6">10.1038/s41598-025-90466-6</a>.
  short: M.D. Saenz-De-Juano, G. Silvestrelli, S. Buri, L.V. Zinsli, M. Schmelcher,
    S.E. Ulbrich, Scientific Reports 15 (2025) 6059.
date_created: 2025-03-09T23:01:26Z
date_published: 2025-02-19T00:00:00Z
date_updated: 2025-09-30T10:58:59Z
day: '19'
ddc:
- '570'
department:
- _id: LoSw
doi: 10.1038/s41598-025-90466-6
external_id:
  isi:
  - '001426697000031'
  pmid:
  - '39972051'
file:
- access_level: open_access
  checksum: 51b55ae299de1fa126016a11024b499a
  content_type: application/pdf
  creator: dernst
  date_created: 2025-03-10T12:00:34Z
  date_updated: 2025-03-10T12:00:34Z
  file_id: '19380'
  file_name: 2025_ScientificReports_SaenzdeJuano.pdf
  file_size: 2780316
  relation: main_file
  success: 1
file_date_updated: 2025-03-10T12:00:34Z
has_accepted_license: '1'
intvolume: '        15'
isi: 1
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
page: '6059'
pmid: 1
publication: Scientific Reports
publication_identifier:
  eissn:
  - 2045-2322
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Mastitis-related Staphylococcus aureus-derived extracellular vesicles induce
  a pro-inflammatory response in bovine monocyte-derived macrophages
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 15
year: '2025'
...
---
OA_type: closed access
_id: '19374'
abstract:
- lang: eng
  text: In the present study, the new ternary rare earth intermetallic compound PrNi6Si6
    has been investigated. This work completes the study of the RNi6Si6 series (R = rare
    earth). While the RNi6Si6 compounds for R = La and Ce adopt the CeNi6Si6-type
    (tP52, P4/nbm, No. 125), surprisingly PrNi6Si6 crystallizes in the YNi6Si6 prototype
    (tP52, P − 4b2, No. 117) as do all the heavier lanthanides (but Lu). The YNi6Si6-type
    and its homolog CeNi6Si6 are two tetragonal ordered derivative of the cubic NaZn13-type
    structure. Lattice parameters for PrNi6Si6 are a = 7.7846(1) Å, c = 11.2144(1)
    Å, with a unit cell volume, Vobs = 679.585(5) Å3. The temperature dependence of
    the inverse magnetic susceptibility χ−1(T) follows the Curie–Weiss law, with calculated
    values of the effective magnetic moment (µeff) and Weiss temperature (Θpm) of
    3.55 μB and − 4.5 K, respectively. While the observed µeff is very close to the
    theoretical value of 3.58 µB for the free Pr3+ ions, a negative value of the Weiss
    temperature suggests antiferromagnetic interactions in PrNi6Si6. Magnetization
    measurements confirm that PrNi₆Si₆ orders antiferromagnetically (AFM) below a
    Néel temperature (TN) of 9 K. The Ni atoms contribute negligibly to the magnetic
    properties of this phase. The specific heat of PrNi₆Si₆ is approximately 0.42
    J K  − 1  g − 1. Measurements of electric and thermal transport reveal that PrNi₆Si₆
    exhibits metallic behavior across a wide temperature range of 2–900 K, accompanied
    by a relatively low thermal conductivity of around 6 W K − 1 m − 1 at room temperature.
    Such properties, together with its high-temperature refractory behavior, make
    PrNi₆Si₆ worthy of consideration in technological applications where fairly good
    electrical conductivity should be accompanied by a limited thermal conductivity.
article_number: '100051'
article_processing_charge: No
article_type: original
author:
- first_name: Saurabh
  full_name: Singh, Saurabh
  id: 12d625da-9cb3-11ed-9667-af09d37d3f0a
  last_name: Singh
  orcid: 0000-0003-2209-5269
- first_name: A.
  full_name: Provino, A.
  last_name: Provino
- first_name: I.
  full_name: Pallecchi, I.
  last_name: Pallecchi
- first_name: F.
  full_name: Caglieris, F.
  last_name: Caglieris
- first_name: M.
  full_name: Mödlinger, M.
  last_name: Mödlinger
- first_name: P.
  full_name: Mele, P.
  last_name: Mele
- first_name: G.
  full_name: Latronico, G.
  last_name: Latronico
- first_name: T.
  full_name: Takeuchi, T.
  last_name: Takeuchi
- first_name: P.
  full_name: Manfrinetti, P.
  last_name: Manfrinetti
citation:
  ama: 'Singh S, Provino A, Pallecchi I, et al. The new PrNi6Si6 intermetallic: From
    crystal structure to thermal and electrical transport properties across a wide
    temperature range (2–900 K). <i>Journal of Materials Science</i>. 2025;60. doi:<a
    href="https://doi.org/10.1007/s10853-024-10582-y">10.1007/s10853-024-10582-y</a>'
  apa: 'Singh, S., Provino, A., Pallecchi, I., Caglieris, F., Mödlinger, M., Mele,
    P., … Manfrinetti, P. (2025). The new PrNi6Si6 intermetallic: From crystal structure
    to thermal and electrical transport properties across a wide temperature range
    (2–900 K). <i>Journal of Materials Science</i>. Springer Nature. <a href="https://doi.org/10.1007/s10853-024-10582-y">https://doi.org/10.1007/s10853-024-10582-y</a>'
  chicago: 'Singh, Saurabh, A. Provino, I. Pallecchi, F. Caglieris, M. Mödlinger,
    P. Mele, G. Latronico, T. Takeuchi, and P. Manfrinetti. “The New PrNi6Si6 Intermetallic:
    From Crystal Structure to Thermal and Electrical Transport Properties across a
    Wide Temperature Range (2–900 K).” <i>Journal of Materials Science</i>. Springer
    Nature, 2025. <a href="https://doi.org/10.1007/s10853-024-10582-y">https://doi.org/10.1007/s10853-024-10582-y</a>.'
  ieee: 'S. Singh <i>et al.</i>, “The new PrNi6Si6 intermetallic: From crystal structure
    to thermal and electrical transport properties across a wide temperature range
    (2–900 K),” <i>Journal of Materials Science</i>, vol. 60. Springer Nature, 2025.'
  ista: 'Singh S, Provino A, Pallecchi I, Caglieris F, Mödlinger M, Mele P, Latronico
    G, Takeuchi T, Manfrinetti P. 2025. The new PrNi6Si6 intermetallic: From crystal
    structure to thermal and electrical transport properties across a wide temperature
    range (2–900 K). Journal of Materials Science. 60, 100051.'
  mla: 'Singh, Saurabh, et al. “The New PrNi6Si6 Intermetallic: From Crystal Structure
    to Thermal and Electrical Transport Properties across a Wide Temperature Range
    (2–900 K).” <i>Journal of Materials Science</i>, vol. 60, 100051, Springer Nature,
    2025, doi:<a href="https://doi.org/10.1007/s10853-024-10582-y">10.1007/s10853-024-10582-y</a>.'
  short: S. Singh, A. Provino, I. Pallecchi, F. Caglieris, M. Mödlinger, P. Mele,
    G. Latronico, T. Takeuchi, P. Manfrinetti, Journal of Materials Science 60 (2025).
date_created: 2025-03-09T23:01:29Z
date_published: 2025-02-08T00:00:00Z
date_updated: 2025-03-10T06:53:16Z
day: '08'
department:
- _id: MaIb
doi: 10.1007/s10853-024-10582-y
intvolume: '        60'
language:
- iso: eng
month: '02'
oa_version: None
publication: Journal of Materials Science
publication_identifier:
  eissn:
  - 1573-4803
  issn:
  - 0022-2461
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'The new PrNi6Si6 intermetallic: From crystal structure to thermal and electrical
  transport properties across a wide temperature range (2–900 K)'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 60
year: '2025'
...
---
OA_type: closed access
_id: '19444'
abstract:
- lang: eng
  text: As the field of neural organoids and assembloids expands, there is an emergent
    need for guidance and advice on designing, conducting and reporting experiments
    to increase the reproducibility and utility of these models. In this Perspective,
    we present a framework for the experimental process that encompasses ensuring
    the quality and integrity of human pluripotent stem cells, characterizing and
    manipulating neural cells in vitro, transplantation techniques and considerations
    for modelling human development, evolution and disease. As with all scientific
    endeavours, we advocate for rigorous experimental designs tailored to explicit
    scientific questions as well as transparent methodologies and data sharing to
    provide useful knowledge for current research practices and for developing regulatory
    standards.
acknowledgement: The authors thank members of their laboratories who provided feedback
  on earlier versions of this manuscript, including A. Jourdon, V. Mariano, T. L.
  Li, N. Caporale, E. Villa and M. Sutcliffe.
article_processing_charge: No
article_type: original
author:
- first_name: Sergiu P.
  full_name: Pașca, Sergiu P.
  last_name: Pașca
- first_name: Paola
  full_name: Arlotta, Paola
  last_name: Arlotta
- first_name: Helen S.
  full_name: Bateup, Helen S.
  last_name: Bateup
- first_name: J. Gray
  full_name: Camp, J. Gray
  last_name: Camp
- first_name: Silvia
  full_name: Cappello, Silvia
  last_name: Cappello
- first_name: Fred H.
  full_name: Gage, Fred H.
  last_name: Gage
- first_name: Jürgen A.
  full_name: Knoblich, Jürgen A.
  last_name: Knoblich
- first_name: Arnold R.
  full_name: Kriegstein, Arnold R.
  last_name: Kriegstein
- first_name: Madeline A.
  full_name: Lancaster, Madeline A.
  last_name: Lancaster
- first_name: Guo Li
  full_name: Ming, Guo Li
  last_name: Ming
- first_name: Gaia
  full_name: Novarino, Gaia
  id: 3E57A680-F248-11E8-B48F-1D18A9856A87
  last_name: Novarino
  orcid: 0000-0002-7673-7178
- first_name: Hideyuki
  full_name: Okano, Hideyuki
  last_name: Okano
- first_name: Malin
  full_name: Parmar, Malin
  last_name: Parmar
- first_name: In Hyun
  full_name: Park, In Hyun
  last_name: Park
- first_name: Orly
  full_name: Reiner, Orly
  last_name: Reiner
- first_name: Hongjun
  full_name: Song, Hongjun
  last_name: Song
- first_name: Lorenz
  full_name: Studer, Lorenz
  last_name: Studer
- first_name: Jun
  full_name: Takahashi, Jun
  last_name: Takahashi
- first_name: Sally
  full_name: Temple, Sally
  last_name: Temple
- first_name: Giuseppe
  full_name: Testa, Giuseppe
  last_name: Testa
- first_name: Barbara
  full_name: Treutlein, Barbara
  last_name: Treutlein
- first_name: Flora M.
  full_name: Vaccarino, Flora M.
  last_name: Vaccarino
- first_name: Pierre
  full_name: Vanderhaeghen, Pierre
  last_name: Vanderhaeghen
- first_name: Tracy
  full_name: Young-Pearse, Tracy
  last_name: Young-Pearse
citation:
  ama: Pașca SP, Arlotta P, Bateup HS, et al. A framework for neural organoids, assembloids
    and transplantation studies. <i>Nature</i>. 2025;639(8054):315-320. doi:<a href="https://doi.org/10.1038/s41586-024-08487-6">10.1038/s41586-024-08487-6</a>
  apa: Pașca, S. P., Arlotta, P., Bateup, H. S., Camp, J. G., Cappello, S., Gage,
    F. H., … Young-Pearse, T. (2025). A framework for neural organoids, assembloids
    and transplantation studies. <i>Nature</i>. Springer Nature. <a href="https://doi.org/10.1038/s41586-024-08487-6">https://doi.org/10.1038/s41586-024-08487-6</a>
  chicago: Pașca, Sergiu P., Paola Arlotta, Helen S. Bateup, J. Gray Camp, Silvia
    Cappello, Fred H. Gage, Jürgen A. Knoblich, et al. “A Framework for Neural Organoids,
    Assembloids and Transplantation Studies.” <i>Nature</i>. Springer Nature, 2025.
    <a href="https://doi.org/10.1038/s41586-024-08487-6">https://doi.org/10.1038/s41586-024-08487-6</a>.
  ieee: S. P. Pașca <i>et al.</i>, “A framework for neural organoids, assembloids
    and transplantation studies,” <i>Nature</i>, vol. 639, no. 8054. Springer Nature,
    pp. 315–320, 2025.
  ista: Pașca SP, Arlotta P, Bateup HS, Camp JG, Cappello S, Gage FH, Knoblich JA,
    Kriegstein AR, Lancaster MA, Ming GL, Novarino G, Okano H, Parmar M, Park IH,
    Reiner O, Song H, Studer L, Takahashi J, Temple S, Testa G, Treutlein B, Vaccarino
    FM, Vanderhaeghen P, Young-Pearse T. 2025. A framework for neural organoids, assembloids
    and transplantation studies. Nature. 639(8054), 315–320.
  mla: Pașca, Sergiu P., et al. “A Framework for Neural Organoids, Assembloids and
    Transplantation Studies.” <i>Nature</i>, vol. 639, no. 8054, Springer Nature,
    2025, pp. 315–20, doi:<a href="https://doi.org/10.1038/s41586-024-08487-6">10.1038/s41586-024-08487-6</a>.
  short: S.P. Pașca, P. Arlotta, H.S. Bateup, J.G. Camp, S. Cappello, F.H. Gage, J.A.
    Knoblich, A.R. Kriegstein, M.A. Lancaster, G.L. Ming, G. Novarino, H. Okano, M.
    Parmar, I.H. Park, O. Reiner, H. Song, L. Studer, J. Takahashi, S. Temple, G.
    Testa, B. Treutlein, F.M. Vaccarino, P. Vanderhaeghen, T. Young-Pearse, Nature
    639 (2025) 315–320.
date_created: 2025-03-23T23:01:27Z
date_published: 2025-03-13T00:00:00Z
date_updated: 2025-09-30T11:13:47Z
day: '13'
department:
- _id: GaNo
doi: 10.1038/s41586-024-08487-6
external_id:
  isi:
  - '001437461900001'
  pmid:
  - '39653126'
intvolume: '       639'
isi: 1
issue: '8054'
language:
- iso: eng
month: '03'
oa_version: None
page: 315-320
pmid: 1
publication: Nature
publication_identifier:
  eissn:
  - 1476-4687
  issn:
  - 0028-0836
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: A framework for neural organoids, assembloids and transplantation studies
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 639
year: '2025'
...
---
OA_place: repository
OA_type: green
_id: '19483'
abstract:
- lang: eng
  text: We prove matching upper and lower bounds for the average of the6-torsionof
    class groups of quadratic fields. Furthermore, we count the number of integer
    solutions on an affine quartic threefold.
article_number: '18'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Yik Tung
  full_name: Chan, Yik Tung
  id: c4c0afc8-9262-11ed-9231-d8b0bc743af1
  last_name: Chan
  orcid: 0000-0001-8467-4106
- first_name: Peter
  full_name: Koymans, Peter
  last_name: Koymans
- first_name: Carlo
  full_name: Pagano, Carlo
  last_name: Pagano
- first_name: Efthymios
  full_name: Sofos, Efthymios
  last_name: Sofos
citation:
  ama: Chan S, Koymans P, Pagano C, Sofos E. 6-torision and integral points on quartic
    threefolds. <i>Annali della Scuola Normale Superiore di Pisa, Classe di Scienze</i>.
    2025. doi:<a href="https://doi.org/10.2422/2036-2145.202412_006">10.2422/2036-2145.202412_006</a>
  apa: Chan, S., Koymans, P., Pagano, C., &#38; Sofos, E. (2025). 6-torision and integral
    points on quartic threefolds. <i>Annali Della Scuola Normale Superiore Di Pisa,
    Classe Di Scienze</i>. Scuola Normale Superiore - Edizioni della Normale. <a href="https://doi.org/10.2422/2036-2145.202412_006">https://doi.org/10.2422/2036-2145.202412_006</a>
  chicago: Chan, Stephanie, Peter Koymans, Carlo Pagano, and Efthymios Sofos. “6-Torision
    and Integral Points on Quartic Threefolds.” <i>Annali Della Scuola Normale Superiore
    Di Pisa, Classe Di Scienze</i>. Scuola Normale Superiore - Edizioni della Normale,
    2025. <a href="https://doi.org/10.2422/2036-2145.202412_006">https://doi.org/10.2422/2036-2145.202412_006</a>.
  ieee: S. Chan, P. Koymans, C. Pagano, and E. Sofos, “6-torision and integral points
    on quartic threefolds,” <i>Annali della Scuola Normale Superiore di Pisa, Classe
    di Scienze</i>. Scuola Normale Superiore - Edizioni della Normale, 2025.
  ista: Chan S, Koymans P, Pagano C, Sofos E. 2025. 6-torision and integral points
    on quartic threefolds. Annali della Scuola Normale Superiore di Pisa, Classe di
    Scienze., 18.
  mla: Chan, Stephanie, et al. “6-Torision and Integral Points on Quartic Threefolds.”
    <i>Annali Della Scuola Normale Superiore Di Pisa, Classe Di Scienze</i>, 18, Scuola
    Normale Superiore - Edizioni della Normale, 2025, doi:<a href="https://doi.org/10.2422/2036-2145.202412_006">10.2422/2036-2145.202412_006</a>.
  short: S. Chan, P. Koymans, C. Pagano, E. Sofos, Annali Della Scuola Normale Superiore
    Di Pisa, Classe Di Scienze (2025).
corr_author: '1'
date_created: 2025-04-05T10:49:27Z
date_published: 2025-03-07T00:00:00Z
date_updated: 2025-05-14T11:40:24Z
day: '07'
department:
- _id: TiBr
doi: 10.2422/2036-2145.202412_006
external_id:
  arxiv:
  - '2403.13359'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: ' https://doi.org/10.48550/arXiv.2403.13359'
month: '03'
oa: 1
oa_version: Preprint
publication: Annali della Scuola Normale Superiore di Pisa, Classe di Scienze
publication_identifier:
  eissn:
  - 2036-2145
  issn:
  - 0391-173X
publication_status: epub_ahead
publisher: Scuola Normale Superiore - Edizioni della Normale
status: public
title: 6-torision and integral points on quartic threefolds
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2025'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
_id: '19596'
abstract:
- lang: eng
  text: "We report the spectroscopic discovery of a massive quiescent galaxy at zspec
    = 7.29 ± 0.01, just ∼700 Myr after the big bang. RUBIES-UDS-QG-z7 was selected
    from public JWST/NIRCam and MIRI imaging from the PRIMER survey and observed with
    JWST/NIRSpec as part of RUBIES. The NIRSpec/PRISM spectrum reveals one of the
    strongest Balmer breaks observed thus far at z > 6, with no emission lines but
    tentative Balmer and Ca absorption features, as well as a Lyman break. Simultaneous
    modeling of the NIRSpec/PRISM spectrum and NIRCam and MIRI photometry (spanning
    0.9–18 μm) shows that the galaxy formed a stellar mass of\r\n(math. formular)
    before z ∼ 8 and ceased forming stars 50–100 Myr prior to the time of observation,
    resulting in log (sSFR/Gyr- 1) < -1 . We measure a small physical size of (math
    formular) , which implies a high stellarmass surface density within the effective
    radius of (math formular) comparable to the highest densities measured in quiescent
    galaxies at z ∼ 2–5. The 3D stellar-mass density profile of RUBIES-UDS-QG-z7 is
    remarkably similar to the central densities of local massive ellipticals, suggesting
    that at least some of their cores may have already been in place at z > 7. The
    discovery of RUBIES-UDS-QG-z7 has strong implications for galaxy formation models:
    the estimated number density of quiescent galaxies at z ∼ 7 is >100 × larger than
    predicted from any model to date, indicating that quiescent galaxies have formed
    earlier than previously expected. "
acknowledgement: "We thank the PRIMER team for making their imaging data publicly
  available immediately. This work is based on observations made with the NASA/ESA/CSA
  James Webb Space Telescope. The data were obtained from the Mikulski Archive for
  Space Telescopes at the Space Telescope Science Institute, which is operated by
  the Association of Universities for Research in Astronomy, Inc., under NASA contract
  NAS 5-03127 for JWST. These observations are associated with program #4233. Support
  for program #4233 was provided by NASA through a grant from the Space Telescope
  Science Institute, which is operated by the Association of Universities for Research
  in Astronomy, Inc., under NASA contract NAS 5-03127. This research was supported
  by the International Space Science Institute (ISSI) in Bern, through ISSI International
  Team project #562. The Cosmic Dawn Center is funded by the Danish National Research
  Foundation (DNRF140). This work has received funding from the Swiss State Secretariat
  for Education, Research and Innovation (SERI), under contract number MB22.00072,
  as well as from the Swiss National Science Foundation (SNSF), through project grant
  200020_207349. Support for this work was provided by The Brinson Foundation through
  a Brinson Prize Fellowship grant. Support for this work for R.P.N. was provided
  by NASA through the NASA Hubble Fellowship grant HST-HF2-51515.001-A, awarded by
  the Space Telescope Science Institute, which is operated by the Association of Universities
  for Research in Astronomy, Incorporated, under NASA contract NAS5-26555. T.B.M.
  was supported by a CIERA fellowship.\r\nAll software packages used in this work
  are publicly available on Github: grizli, msafit, msaexp, Prospector, and sedpy.
  We acknowledge: astropy (Astropy Collaboration et al. 2013, 2018, 2022), matplotlib
  (J. D. Hunter 2007), numpy (C. R. Harris et al. 2020), scipy (P. Virtanen et al.
  2020), lmfit (M. Newville et al. 2024), eMPT (N. Bonaventura et al. 2023), the jwst
  pipeline (H. Bushouse et al. 2024), msaexp (G. Brammer 2024a), and grizli (G. Brammer
  2024b),."
article_number: '11'
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Andrea
  full_name: Weibel, Andrea
  last_name: Weibel
- first_name: Anna
  full_name: De Graaff, Anna
  last_name: De Graaff
- first_name: David J.
  full_name: Setton, David J.
  last_name: Setton
- first_name: Tim B.
  full_name: Miller, Tim B.
  last_name: Miller
- first_name: Pascal A.
  full_name: Oesch, Pascal A.
  last_name: Oesch
- first_name: Gabriel
  full_name: Brammer, Gabriel
  last_name: Brammer
- first_name: Claudia D.P.
  full_name: Lagos, Claudia D.P.
  last_name: Lagos
- first_name: Katherine E.
  full_name: Whitaker, Katherine E.
  last_name: Whitaker
- first_name: Christina C.
  full_name: Williams, Christina C.
  last_name: Williams
- first_name: Josephine F.W.
  full_name: Baggen, Josephine F.W.
  last_name: Baggen
- first_name: Rachel
  full_name: Bezanson, Rachel
  last_name: Bezanson
- first_name: Leindert A.
  full_name: Boogaard, Leindert A.
  last_name: Boogaard
- first_name: Nikko J.
  full_name: Cleri, Nikko J.
  last_name: Cleri
- first_name: Jenny E.
  full_name: Greene, Jenny E.
  last_name: Greene
- first_name: Michaela
  full_name: Hirschmann, Michaela
  last_name: Hirschmann
- first_name: Raphael E.
  full_name: Hviding, Raphael E.
  last_name: Hviding
- first_name: Adarsh
  full_name: Kuruvanthodi, Adarsh
  last_name: Kuruvanthodi
- first_name: Ivo
  full_name: Labbé, Ivo
  last_name: Labbé
- first_name: Joel
  full_name: Leja, Joel
  last_name: Leja
- first_name: Michael V.
  full_name: Maseda, Michael V.
  last_name: Maseda
- first_name: Jorryt J
  full_name: Matthee, Jorryt J
  id: 7439a258-f3c0-11ec-9501-9df22fe06720
  last_name: Matthee
  orcid: 0000-0003-2871-127X
- first_name: Ian
  full_name: Mcconachie, Ian
  last_name: Mcconachie
- first_name: Rohan P.
  full_name: Naidu, Rohan P.
  last_name: Naidu
- first_name: Guido
  full_name: Roberts-Borsani, Guido
  last_name: Roberts-Borsani
- first_name: Daniel
  full_name: Schaerer, Daniel
  last_name: Schaerer
- first_name: Katherine A.
  full_name: Suess, Katherine A.
  last_name: Suess
- first_name: Francesco
  full_name: Valentino, Francesco
  last_name: Valentino
- first_name: Pieter
  full_name: Van Dokkum, Pieter
  last_name: Van Dokkum
- first_name: Bingjie
  full_name: Wang, Bingjie
  last_name: Wang
citation:
  ama: Weibel A, De Graaff A, Setton DJ, et al. RUBIES reveals a massive quiescent
    galaxy at z = 7.3. <i>The Astrophysical Journal</i>. 2025;983(1). doi:<a href="https://doi.org/10.3847/1538-4357/adab7a">10.3847/1538-4357/adab7a</a>
  apa: Weibel, A., De Graaff, A., Setton, D. J., Miller, T. B., Oesch, P. A., Brammer,
    G., … Wang, B. (2025). RUBIES reveals a massive quiescent galaxy at z = 7.3. <i>The
    Astrophysical Journal</i>. IOP Publishing. <a href="https://doi.org/10.3847/1538-4357/adab7a">https://doi.org/10.3847/1538-4357/adab7a</a>
  chicago: Weibel, Andrea, Anna De Graaff, David J. Setton, Tim B. Miller, Pascal
    A. Oesch, Gabriel Brammer, Claudia D.P. Lagos, et al. “RUBIES Reveals a Massive
    Quiescent Galaxy at z = 7.3.” <i>The Astrophysical Journal</i>. IOP Publishing,
    2025. <a href="https://doi.org/10.3847/1538-4357/adab7a">https://doi.org/10.3847/1538-4357/adab7a</a>.
  ieee: A. Weibel <i>et al.</i>, “RUBIES reveals a massive quiescent galaxy at z =
    7.3,” <i>The Astrophysical Journal</i>, vol. 983, no. 1. IOP Publishing, 2025.
  ista: Weibel A, De Graaff A, Setton DJ, Miller TB, Oesch PA, Brammer G, Lagos CDP,
    Whitaker KE, Williams CC, Baggen JFW, Bezanson R, Boogaard LA, Cleri NJ, Greene
    JE, Hirschmann M, Hviding RE, Kuruvanthodi A, Labbé I, Leja J, Maseda MV, Matthee
    JJ, Mcconachie I, Naidu RP, Roberts-Borsani G, Schaerer D, Suess KA, Valentino
    F, Van Dokkum P, Wang B. 2025. RUBIES reveals a massive quiescent galaxy at z
    = 7.3. The Astrophysical Journal. 983(1), 11.
  mla: Weibel, Andrea, et al. “RUBIES Reveals a Massive Quiescent Galaxy at z = 7.3.”
    <i>The Astrophysical Journal</i>, vol. 983, no. 1, 11, IOP Publishing, 2025, doi:<a
    href="https://doi.org/10.3847/1538-4357/adab7a">10.3847/1538-4357/adab7a</a>.
  short: A. Weibel, A. De Graaff, D.J. Setton, T.B. Miller, P.A. Oesch, G. Brammer,
    C.D.P. Lagos, K.E. Whitaker, C.C. Williams, J.F.W. Baggen, R. Bezanson, L.A. Boogaard,
    N.J. Cleri, J.E. Greene, M. Hirschmann, R.E. Hviding, A. Kuruvanthodi, I. Labbé,
    J. Leja, M.V. Maseda, J.J. Matthee, I. Mcconachie, R.P. Naidu, G. Roberts-Borsani,
    D. Schaerer, K.A. Suess, F. Valentino, P. Van Dokkum, B. Wang, The Astrophysical
    Journal 983 (2025).
date_created: 2025-04-20T22:01:28Z
date_published: 2025-04-10T00:00:00Z
date_updated: 2026-02-16T12:42:28Z
day: '10'
ddc:
- '520'
department:
- _id: JoMa
doi: 10.3847/1538-4357/adab7a
external_id:
  arxiv:
  - '2409.03829'
  isi:
  - '001457334900001'
file:
- access_level: open_access
  checksum: a1132e0b18bb643f9a32674c6694375a
  content_type: application/pdf
  creator: dernst
  date_created: 2025-04-22T09:08:17Z
  date_updated: 2025-04-22T09:08:17Z
  file_id: '19605'
  file_name: 2025_AstrophysicalJour_Weibel.pdf
  file_size: 1964589
  relation: main_file
  success: 1
file_date_updated: 2025-04-22T09:08:17Z
has_accepted_license: '1'
intvolume: '       983'
isi: 1
issue: '1'
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
publication: The Astrophysical Journal
publication_identifier:
  eissn:
  - 1538-4357
  issn:
  - 0004-637X
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: RUBIES reveals a massive quiescent galaxy at z = 7.3
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 983
year: '2025'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
_id: '19636'
abstract:
- lang: eng
  text: This summary of the second Terrestrial Very-Long-Baseline Atom Interferometry
    (TVLBAI) Workshop provides a comprehensive overview of our meeting held in London
    in April 2024 (Second Terrestrial Very-Long-Baseline Atom Interferometry Workshop,
    Imperial College, April 2024), building on the initial discussions during the
    inaugural workshop held at CERN in March 2023 (First Terrestrial Very-Long-Baseline
    Atom Interferometry Workshop, CERN, March 2023). Like the summary of the first
    workshop (Abend et al. in AVS Quantum Sci. 6:024701, 2024), this document records
    a critical milestone for the international atom interferometry community. It documents
    our concerted efforts to evaluate progress, address emerging challenges, and refine
    strategic directions for future large-scale atom interferometry projects. Our
    commitment to collaboration is manifested by the integration of diverse expertise
    and the coordination of international resources, all aimed at advancing the frontiers
    of atom interferometry physics and technology, as set out in a Memorandum of Understanding
    signed by over 50 institutions (Memorandum of Understanding for the Terrestrial
    Very Long Baseline Atom Interferometer Study).
acknowledgement: "We acknowledge the support of the CERN Physics Beyond Collider activity,
  the CERN Quantum Technology Initiative, the Long Range Broad Agency Announcement
  (BAA) for the Navy and Marine Corps Science and Technology programme, Hannover Leibniz
  University, and the Physics Department at Imperial College London, whose contributions
  were instrumental in supporting the workshop that laid the foundation for this paper.\r\nThe
  workshop was partially funded by contributions from the Long Range Broad Agency
  Announcement (BAA) for the Navy and Marine Corps Science and Technology programme,
  Hannover Leibniz University, and the Physics Department at Imperial College London."
article_number: '42'
article_processing_charge: Yes
article_type: review
arxiv: 1
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citation:
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    Summary of the second workshop. <i>EPJ Quantum Technology</i>. 2025;12. doi:<a
    href="https://doi.org/10.1140/epjqt/s40507-025-00344-3">10.1140/epjqt/s40507-025-00344-3</a>'
  apa: 'Abdalla, A., Abe, M., Abend, S., Abidi, M., Aidelsburger, M., Alibabaei, A.,
    … Zupanič, E. (2025). Terrestrial Very-Long-Baseline Atom Interferometry: Summary
    of the second workshop. <i>EPJ Quantum Technology</i>. Springer Nature. <a href="https://doi.org/10.1140/epjqt/s40507-025-00344-3">https://doi.org/10.1140/epjqt/s40507-025-00344-3</a>'
  chicago: 'Abdalla, Adam, Mahiro Abe, Sven Abend, Mouine Abidi, Monika Aidelsburger,
    Ashkan Alibabaei, Baptiste Allard, et al. “Terrestrial Very-Long-Baseline Atom
    Interferometry: Summary of the Second Workshop.” <i>EPJ Quantum Technology</i>.
    Springer Nature, 2025. <a href="https://doi.org/10.1140/epjqt/s40507-025-00344-3">https://doi.org/10.1140/epjqt/s40507-025-00344-3</a>.'
  ieee: 'A. Abdalla <i>et al.</i>, “Terrestrial Very-Long-Baseline Atom Interferometry:
    Summary of the second workshop,” <i>EPJ Quantum Technology</i>, vol. 12. Springer
    Nature, 2025.'
  ista: 'Abdalla A et al. 2025. Terrestrial Very-Long-Baseline Atom Interferometry:
    Summary of the second workshop. EPJ Quantum Technology. 12, 42.'
  mla: 'Abdalla, Adam, et al. “Terrestrial Very-Long-Baseline Atom Interferometry:
    Summary of the Second Workshop.” <i>EPJ Quantum Technology</i>, vol. 12, 42, Springer
    Nature, 2025, doi:<a href="https://doi.org/10.1140/epjqt/s40507-025-00344-3">10.1140/epjqt/s40507-025-00344-3</a>.'
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    A.J. Tolley, V. Tornatore, A. Torres-Orjuela, P. Treutlein, A. Trombettoni, C.
    Ufrecht, J. Urrutia, T. Valenzuela, L.R. Valerio, M. Van Der Grinten, V. Vaskonen,
    V. Vázquez-Aceves, H. Veermäe, F. Vetrano, N.V. Vitanov, W. Von Klitzing, S. Wald,
    T. Walker, R. Walser, J. Wang, Y. Wang, C.A. Weidner, A. Wenzlawski, M. Werner,
    L. Wörner, M.E. Yahia, E. Yazgan, E. Zambrini Cruzeiro, M. Zarei, M. Zhan, S.
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date_created: 2025-05-04T22:02:30Z
date_published: 2025-04-03T00:00:00Z
date_updated: 2025-09-30T12:22:04Z
day: '03'
ddc:
- '530'
department:
- _id: OnHo
doi: 10.1140/epjqt/s40507-025-00344-3
external_id:
  arxiv:
  - '2412.14960'
  isi:
  - '001489653300001'
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month: '04'
oa: 1
oa_version: Published Version
publication: EPJ Quantum Technology
publication_identifier:
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publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Terrestrial Very-Long-Baseline Atom Interferometry: Summary of the second
  workshop'
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user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 12
year: '2025'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
_id: '19638'
abstract:
- lang: eng
  text: The James Webb Space Telescope has revealed low-luminosity active galactic
    nuclei at redshifts of z ≳ 4–7, many of which host accreting massive black holes
    (BHs) with BH-to-galaxy mass (MBH/M⋆) ratios exceeding the local values by more
    than an order of magnitude. The origin of these overmassive BHs remains unclear
    but requires potential contributions from heavy seeds and/or episodes of super-Eddington
    accretion. We present a growth model coupled with dark matter halo assembly to
    explore the evolution of the MBH/M⋆ ratio under different seeding and feedback
    scenarios. Given the gas inflow rates in protogalaxies, BHs grow episodically
    at moderate super-Eddington rates, and the mass ratio increases early on, despite
    significant mass loss through feedback. Regardless of seeding mechanisms, the
    mass ratio converges to a universal value ∼0.1–0.3, set by the balance between
    gas feeding and star formation efficiency in the nucleus. This behavior defines
    an attractor in the MBH–M⋆ diagram, where overmassive BHs grow more slowly than
    their hosts, while undermassive seeds experience rapid growth before aligning
    with the attractor. We derive an analytical expression for the universal mass
    ratio, linking it to feedback strength and halo growth. The convergence of evolutionary
    tracks erases seeding information from the mass ratio by z ∼ 4–6. Detecting BHs
    with ∼105−6 M⊙ at higher redshifts that deviate from the convergence trend would
    provide key diagnostics of their birth conditions.
acknowledgement: We thank the anonymous referee for a careful reading of our manuscript
  and for comments that helped improve this Letter. This work is supported by the
  Japan Society for the Promotion of Science (JSPS) KAKENHI grant No. 24KF0130. We
  acknowledge support from the National Natural Science Foundation of China (12073003,
  12003003, 11721303, 11991052, 11950410493), and the China Manned Space Project (CMS-CSST-2021-A04
  and CMS-CSST-2021-A06). L.C.H. is supported by the National Science Foundation of
  China (12233001), the National Key R&D Program of China (2022YFF0503401). Z.H. acknowledges
  support by US NSF grant AST-2006176 and by NASA grant 80NSSC22K0822. Some of the
  numerical calculation and analysis were performed with the Cray XC50 at the Center
  for Computational Astrophysics (CfCA) of the National Astronomical Observatory of
  Japan and with the High-performance Computing Platform of Peking University.
article_number: L37
article_processing_charge: Yes
article_type: letter_note
arxiv: 1
author:
- first_name: Haojie
  full_name: Hu, Haojie
  last_name: Hu
- first_name: Kohei
  full_name: Inayoshi, Kohei
  last_name: Inayoshi
- first_name: Zoltán
  full_name: Haiman, Zoltán
  id: 7c006e8c-cc0d-11ee-8322-cb904ef76f36
  last_name: Haiman
  orcid: 0000-0003-3633-5403
- first_name: Luis C.
  full_name: Ho, Luis C.
  last_name: Ho
- first_name: Ken
  full_name: Ohsuga, Ken
  last_name: Ohsuga
citation:
  ama: Hu H, Inayoshi K, Haiman Z, Ho LC, Ohsuga K. The convergence of heavy and light
    seeds to overmassive black holes at cosmic dawn. <i>The Astrophysical Journal
    Letters</i>. 2025;983(2). doi:<a href="https://doi.org/10.3847/2041-8213/adc680">10.3847/2041-8213/adc680</a>
  apa: Hu, H., Inayoshi, K., Haiman, Z., Ho, L. C., &#38; Ohsuga, K. (2025). The convergence
    of heavy and light seeds to overmassive black holes at cosmic dawn. <i>The Astrophysical
    Journal Letters</i>. IOP Publishing. <a href="https://doi.org/10.3847/2041-8213/adc680">https://doi.org/10.3847/2041-8213/adc680</a>
  chicago: Hu, Haojie, Kohei Inayoshi, Zoltán Haiman, Luis C. Ho, and Ken Ohsuga.
    “The Convergence of Heavy and Light Seeds to Overmassive Black Holes at Cosmic
    Dawn.” <i>The Astrophysical Journal Letters</i>. IOP Publishing, 2025. <a href="https://doi.org/10.3847/2041-8213/adc680">https://doi.org/10.3847/2041-8213/adc680</a>.
  ieee: H. Hu, K. Inayoshi, Z. Haiman, L. C. Ho, and K. Ohsuga, “The convergence of
    heavy and light seeds to overmassive black holes at cosmic dawn,” <i>The Astrophysical
    Journal Letters</i>, vol. 983, no. 2. IOP Publishing, 2025.
  ista: Hu H, Inayoshi K, Haiman Z, Ho LC, Ohsuga K. 2025. The convergence of heavy
    and light seeds to overmassive black holes at cosmic dawn. The Astrophysical Journal
    Letters. 983(2), L37.
  mla: Hu, Haojie, et al. “The Convergence of Heavy and Light Seeds to Overmassive
    Black Holes at Cosmic Dawn.” <i>The Astrophysical Journal Letters</i>, vol. 983,
    no. 2, L37, IOP Publishing, 2025, doi:<a href="https://doi.org/10.3847/2041-8213/adc680">10.3847/2041-8213/adc680</a>.
  short: H. Hu, K. Inayoshi, Z. Haiman, L.C. Ho, K. Ohsuga, The Astrophysical Journal
    Letters 983 (2025).
date_created: 2025-05-04T22:02:31Z
date_published: 2025-04-20T00:00:00Z
date_updated: 2026-02-16T12:44:04Z
day: '20'
ddc:
- '520'
department:
- _id: ZoHa
doi: 10.3847/2041-8213/adc680
external_id:
  arxiv:
  - '2503.03870'
  isi:
  - '001467616800001'
file:
- access_level: open_access
  checksum: 1a4fbeeb12e9022873e86c72d230a5ec
  content_type: application/pdf
  creator: dernst
  date_created: 2025-05-05T11:30:34Z
  date_updated: 2025-05-05T11:30:34Z
  file_id: '19655'
  file_name: 2025_AstrophysicalJourLetters_Hu.pdf
  file_size: 3334014
  relation: main_file
  success: 1
file_date_updated: 2025-05-05T11:30:34Z
has_accepted_license: '1'
intvolume: '       983'
isi: 1
issue: '2'
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
publication: The Astrophysical Journal Letters
publication_identifier:
  eissn:
  - 2041-8213
  issn:
  - 2041-8205
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: The convergence of heavy and light seeds to overmassive black holes at cosmic
  dawn
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 983
year: '2025'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
PlanS_conform: '1'
_id: '19662'
abstract:
- lang: eng
  text: We investigate the effect of changes in the Coriolis force caused by changes
    in the rotation rate on the top-of-atmosphere (TOA) radiant energy budget of an
    aquaplanet general circulation model with prescribed sea surface temperatures.
    We analyse the effective radiative forcing caused by changes from Earth-like rotation
    to values between 1/32 and 8 times the Earth's rotation rate. The forcing differs
    by about 60 W m−2 between the fastest and slowest rotation cases, with a monotonically
    increasing positive forcing for faster-than-Earth-like rotations and a non-monotonically
    increasing negative forcing for slower rotations. The largest contributions to
    the forcing are due to changes in, in this order, the shortwave cloud radiative
    effect (SWCRE) and the clear-sky outgoing longwave radiation (OLR). From the fastest
    to the slowest rotation, the Hadley cell expands and the troposphere becomes drier,
    increasing the OLR. This contributes to negative forcing at slower-than-Earth-like
    rotations and to positive forcing at faster-than-Earth-like rotations. The SWCRE
    is influenced by changes in the low-level cloudiness within the Hadley cell and
    the baroclinic regime. With the expansion of the Hadley cell, the area of enhanced
    tropospheric stability increases, resulting in more low-level clouds, a higher
    SWCRE, and increased negative forcing. The non-monotonicity results from an intermediate
    decrease in the SWCRE caused by the disappearance of baroclinic eddies as the
    Hadley cell reaches global extension. At rotations faster than Earth-like, the
    decrease in the SWCRE, mainly due to the weakening of baroclinic eddies and storm
    systems, leads to an increase in positive forcing. In summary, changes in the
    SWCRE, driven by different circulation responses at slower-than-Earth-like and
    faster-than-Earth-like rotations, strongly influence the TOA radiant energy budget.
    These effects, along with a substantial contribution from the clear-sky OLR, could
    impact the habitability of Earth-like rotating planets.
acknowledgement: "We thank Bjorn Stevens for suggesting the study and for substantial
  ideas along the way. We also thank Sebastian Rast for helping with the model compilation.
  This work used resources of the German Climate Computing Center (DKRZ) under project
  ID mh0066 for our experiments and analysis. Jiawei Bao acknowledges the European
  Union's Horizon 2020 for funding.Jiawei Bao has been supported by the European Union's
  Horizon 2020 research and innovation programme under a Marie Skłodowska-Curie grant
  (grant agreement no. 101034413).\r\nThe article processing charges for this open-access
  publication were covered by the Max Planck Society."
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Abisha Mary
  full_name: Gnanaraj, Abisha Mary
  last_name: Gnanaraj
- first_name: Jiawei
  full_name: Bao, Jiawei
  id: bb9a7399-fefd-11ed-be3c-ae648fd1d160
  last_name: Bao
- first_name: Hauke
  full_name: Schmidt, Hauke
  last_name: Schmidt
citation:
  ama: 'Gnanaraj AM, Bao J, Schmidt H. The impact of the rotation rate on an aquaplanet’s
    radiant energy budget: Insights from experiments varying the Coriolis parameter.
    <i>Weather and Climate Dynamics</i>. 2025;6(2):489-503. doi:<a href="https://doi.org/10.5194/wcd-6-489-2025">10.5194/wcd-6-489-2025</a>'
  apa: 'Gnanaraj, A. M., Bao, J., &#38; Schmidt, H. (2025). The impact of the rotation
    rate on an aquaplanet’s radiant energy budget: Insights from experiments varying
    the Coriolis parameter. <i>Weather and Climate Dynamics</i>. Copernicus Publications.
    <a href="https://doi.org/10.5194/wcd-6-489-2025">https://doi.org/10.5194/wcd-6-489-2025</a>'
  chicago: 'Gnanaraj, Abisha Mary, Jiawei Bao, and Hauke Schmidt. “The Impact of the
    Rotation Rate on an Aquaplanet’s Radiant Energy Budget: Insights from Experiments
    Varying the Coriolis Parameter.” <i>Weather and Climate Dynamics</i>. Copernicus
    Publications, 2025. <a href="https://doi.org/10.5194/wcd-6-489-2025">https://doi.org/10.5194/wcd-6-489-2025</a>.'
  ieee: 'A. M. Gnanaraj, J. Bao, and H. Schmidt, “The impact of the rotation rate
    on an aquaplanet’s radiant energy budget: Insights from experiments varying the
    Coriolis parameter,” <i>Weather and Climate Dynamics</i>, vol. 6, no. 2. Copernicus
    Publications, pp. 489–503, 2025.'
  ista: 'Gnanaraj AM, Bao J, Schmidt H. 2025. The impact of the rotation rate on an
    aquaplanet’s radiant energy budget: Insights from experiments varying the Coriolis
    parameter. Weather and Climate Dynamics. 6(2), 489–503.'
  mla: 'Gnanaraj, Abisha Mary, et al. “The Impact of the Rotation Rate on an Aquaplanet’s
    Radiant Energy Budget: Insights from Experiments Varying the Coriolis Parameter.”
    <i>Weather and Climate Dynamics</i>, vol. 6, no. 2, Copernicus Publications, 2025,
    pp. 489–503, doi:<a href="https://doi.org/10.5194/wcd-6-489-2025">10.5194/wcd-6-489-2025</a>.'
  short: A.M. Gnanaraj, J. Bao, H. Schmidt, Weather and Climate Dynamics 6 (2025)
    489–503.
date_created: 2025-05-11T22:02:38Z
date_published: 2025-04-25T00:00:00Z
date_updated: 2025-07-09T08:40:18Z
day: '25'
ddc:
- '550'
department:
- _id: CaMu
doi: 10.5194/wcd-6-489-2025
ec_funded: 1
file:
- access_level: open_access
  checksum: 2ea68f7e51ee39ccb6886719a83a78ca
  content_type: application/pdf
  creator: dernst
  date_created: 2025-05-12T08:23:10Z
  date_updated: 2025-05-12T08:23:10Z
  file_id: '19680'
  file_name: 2025_WeatherClimateDynam_Gnanaraj.pdf
  file_size: 6500575
  relation: main_file
  success: 1
file_date_updated: 2025-05-12T08:23:10Z
has_accepted_license: '1'
intvolume: '         6'
issue: '2'
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
page: 489-503
project:
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
  call_identifier: H2020
  grant_number: '101034413'
  name: 'IST-BRIDGE: International postdoctoral program'
publication: Weather and Climate Dynamics
publication_identifier:
  eissn:
  - 2698-4016
publication_status: published
publisher: Copernicus Publications
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'The impact of the rotation rate on an aquaplanet''s radiant energy budget:
  Insights from experiments varying the Coriolis parameter'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 6
year: '2025'
...
---
OA_place: repository
OA_type: green
_id: '19769'
abstract:
- lang: eng
  text: "Artifact to reproduce the experimental results presented in the article \"Sound
    Statistical Model Checking for Probabilities and Expected Rewards\" by Carlos
    E. Budde, Arnd Hartmanns, Tobias Meggendorfer, Maximilian Weininger, and Patrick
    Wienhöft (TACAS 2025).\r\n\r\nThe contents include all data and software (formal
    models, software tools, Python & bash scripts) used in the experimental evaluation
    presented in sections 3, 4, and 6 of the article. Detailed instructions on how
    to reproduce the results are bundled in the artifact."
article_processing_charge: No
author:
- first_name: Carlos
  full_name: Budde, Carlos
  last_name: Budde
- first_name: Arnd
  full_name: Hartmanns, Arnd
  last_name: Hartmanns
- first_name: Tobias
  full_name: Meggendorfer, Tobias
  id: b21b0c15-30a2-11eb-80dc-f13ca25802e1
  last_name: Meggendorfer
  orcid: 0000-0002-1712-2165
- first_name: Maximilian
  full_name: Weininger, Maximilian
  id: 02ab0197-cc70-11ed-ab61-918e71f56881
  last_name: Weininger
- first_name: Patrick
  full_name: Wienhöft, Patrick
  last_name: Wienhöft
citation:
  ama: Budde C, Hartmanns A, Meggendorfer T, Weininger M, Wienhöft P. Sound statistical
    model checking for probabilities and expected rewards (experimental reproduction
    package). 2025. doi:<a href="https://doi.org/10.5281/ZENODO.14602066">10.5281/ZENODO.14602066</a>
  apa: Budde, C., Hartmanns, A., Meggendorfer, T., Weininger, M., &#38; Wienhöft,
    P. (2025). Sound statistical model checking for probabilities and expected rewards
    (experimental reproduction package). Zenodo. <a href="https://doi.org/10.5281/ZENODO.14602066">https://doi.org/10.5281/ZENODO.14602066</a>
  chicago: Budde, Carlos, Arnd Hartmanns, Tobias Meggendorfer, Maximilian Weininger,
    and Patrick Wienhöft. “Sound Statistical Model Checking for Probabilities and
    Expected Rewards (Experimental Reproduction Package).” Zenodo, 2025. <a href="https://doi.org/10.5281/ZENODO.14602066">https://doi.org/10.5281/ZENODO.14602066</a>.
  ieee: C. Budde, A. Hartmanns, T. Meggendorfer, M. Weininger, and P. Wienhöft, “Sound
    statistical model checking for probabilities and expected rewards (experimental
    reproduction package).” Zenodo, 2025.
  ista: Budde C, Hartmanns A, Meggendorfer T, Weininger M, Wienhöft P. 2025. Sound
    statistical model checking for probabilities and expected rewards (experimental
    reproduction package), Zenodo, <a href="https://doi.org/10.5281/ZENODO.14602066">10.5281/ZENODO.14602066</a>.
  mla: Budde, Carlos, et al. <i>Sound Statistical Model Checking for Probabilities
    and Expected Rewards (Experimental Reproduction Package)</i>. Zenodo, 2025, doi:<a
    href="https://doi.org/10.5281/ZENODO.14602066">10.5281/ZENODO.14602066</a>.
  short: C. Budde, A. Hartmanns, T. Meggendorfer, M. Weininger, P. Wienhöft, (2025).
date_created: 2025-06-02T09:37:14Z
date_published: 2025-01-07T00:00:00Z
date_updated: 2025-06-02T09:45:41Z
day: '07'
ddc:
- '000'
department:
- _id: KrCh
doi: 10.5281/ZENODO.14602066
main_file_link:
- open_access: '1'
  url: https://doi.org/10.5281/ZENODO.14602066
month: '01'
oa: 1
oa_version: Published Version
publisher: Zenodo
related_material:
  record:
  - id: '19742'
    relation: used_in_publication
    status: public
status: public
title: Sound statistical model checking for probabilities and expected rewards (experimental
  reproduction package)
type: research_data_reference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2025'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
_id: '20977'
abstract:
- lang: eng
  text: Hippocampal sharp-wave ripples (SPW-Rs) are high-frequency oscillations critical
    for memory consolidation. Despite extensive characterization in rodents, their
    detection in humans is limited by coarse spatial sampling, interictal epileptiform
    discharges (IEDs), and a lack of consensus on human ripple localization and morphology.
    Here, we demonstrate that mouse and human hippocampal ripples share spatial, spectral
    and temporal features, which are clearly distinct from IEDs. In recordings from
    male APP/PS1 mice, SPW-Rs were distinguishable from IEDs by multiple criteria.
    Hippocampal ripples recorded during NREM sleep in female and male surgical epilepsy
    patients exhibited similar narrowband frequency peaks and multiple ripple cycles
    in the CA1 and subiculum regions. Conversely, IEDs showed a broad spatial extent
    and wide-band frequency power. We developed a semi-automated, ripple curation
    toolbox (ripmap) to separate event waveforms by low-dimensional embedding to reduce
    false-positive rate in selected ripple channels. Our approach improves ripple
    detection and provides a firm foundation for future human memory research.
acknowledgement: We thank Karl Rössler and Sebastian Brandner for the human SEEG implantations;
  Katja Kobow for providing the histopathological findings of the patients; Jay Jeschke
  for help with human electrode localization; Esha Brahmbhatt and Deren Aykan for
  help with animal habituation; Mursel Karadas for the rodent treadmill design; Nicholas
  Paleologos, Noam Nitzan, Michael D Hadler and Samuel McKenzie for rating events
  in a human ripple survey included in a previous version of the manuscript; Nicholas
  Paleologos for sharing NYU iEEG data for validating UMAP parameters; Julio Esparza
  for help on the topological analysis through discussions; Thomas Hainmüller, Yiyao
  Zhang and Mursel Karadas for feedback on the manuscript. We would like to acknowledge
  Corticale SRL (Genoa, Italy) for providing the SiNAPS probes, and NeuroNexus (Ann
  Arbor, MI) for their contribution of the data acquisition system and Radiens software.
  We further acknowledge both Corticale and NeuroNexus for training and support making
  this research possible. This work was supported by the German Research Foundation
  (DFG; Walter Benjamin Fellowship MA 10301/1-1, A.M.), NYU Langone Health Finding
  a Cure for Epilepsy and Seizures (FACES, A.M.), the NOMIS Fellowship (A.N.-O.),
  the National Institutes of Health (R01NS127954, K23NS104252, A.L.; MH122391, U19NS107616,
  R01MH139216 G.B.,), and the NYU Department of Neurology (A.L.).
article_number: '11636'
article_processing_charge: Yes
article_type: original
author:
- first_name: Anna
  full_name: Maslarova, Anna
  last_name: Maslarova
- first_name: Jiyun N.
  full_name: Shin, Jiyun N.
  last_name: Shin
- first_name: Andrea C
  full_name: Navas Olivé, Andrea C
  id: 739d26c9-52e8-11ee-8d72-f14d3893b4ce
  last_name: Navas Olivé
  orcid: 0000-0002-9280-8597
- first_name: Mihály
  full_name: Vöröslakos, Mihály
  last_name: Vöröslakos
- first_name: Hajo
  full_name: Hamer, Hajo
  last_name: Hamer
- first_name: Arnd
  full_name: Doerfler, Arnd
  last_name: Doerfler
- first_name: Simon
  full_name: Henin, Simon
  last_name: Henin
- first_name: György
  full_name: Buzsáki, György
  last_name: Buzsáki
- first_name: Anli
  full_name: Liu, Anli
  last_name: Liu
citation:
  ama: Maslarova A, Shin JN, Navas Olivé AC, et al. Spatiotemporal patterns differentiate
    hippocampal sharp-wave ripples from interictal epileptiform discharges in mice
    and humans. <i>Nature Communications</i>. 2025;16. doi:<a href="https://doi.org/10.1038/s41467-025-66562-6">10.1038/s41467-025-66562-6</a>
  apa: Maslarova, A., Shin, J. N., Navas Olivé, A. C., Vöröslakos, M., Hamer, H.,
    Doerfler, A., … Liu, A. (2025). Spatiotemporal patterns differentiate hippocampal
    sharp-wave ripples from interictal epileptiform discharges in mice and humans.
    <i>Nature Communications</i>. Springer Nature. <a href="https://doi.org/10.1038/s41467-025-66562-6">https://doi.org/10.1038/s41467-025-66562-6</a>
  chicago: Maslarova, Anna, Jiyun N. Shin, Andrea C Navas Olivé, Mihály Vöröslakos,
    Hajo Hamer, Arnd Doerfler, Simon Henin, György Buzsáki, and Anli Liu. “Spatiotemporal
    Patterns Differentiate Hippocampal Sharp-Wave Ripples from Interictal Epileptiform
    Discharges in Mice and Humans.” <i>Nature Communications</i>. Springer Nature,
    2025. <a href="https://doi.org/10.1038/s41467-025-66562-6">https://doi.org/10.1038/s41467-025-66562-6</a>.
  ieee: A. Maslarova <i>et al.</i>, “Spatiotemporal patterns differentiate hippocampal
    sharp-wave ripples from interictal epileptiform discharges in mice and humans,”
    <i>Nature Communications</i>, vol. 16. Springer Nature, 2025.
  ista: Maslarova A, Shin JN, Navas Olivé AC, Vöröslakos M, Hamer H, Doerfler A, Henin
    S, Buzsáki G, Liu A. 2025. Spatiotemporal patterns differentiate hippocampal sharp-wave
    ripples from interictal epileptiform discharges in mice and humans. Nature Communications.
    16, 11636.
  mla: Maslarova, Anna, et al. “Spatiotemporal Patterns Differentiate Hippocampal
    Sharp-Wave Ripples from Interictal Epileptiform Discharges in Mice and Humans.”
    <i>Nature Communications</i>, vol. 16, 11636, Springer Nature, 2025, doi:<a href="https://doi.org/10.1038/s41467-025-66562-6">10.1038/s41467-025-66562-6</a>.
  short: A. Maslarova, J.N. Shin, A.C. Navas Olivé, M. Vöröslakos, H. Hamer, A. Doerfler,
    S. Henin, G. Buzsáki, A. Liu, Nature Communications 16 (2025).
date_created: 2026-01-11T23:01:35Z
date_published: 2025-12-30T00:00:00Z
date_updated: 2026-01-12T09:31:56Z
day: '30'
ddc:
- '570'
department:
- _id: PeJo
doi: 10.1038/s41467-025-66562-6
external_id:
  pmid:
  - '39975118'
file:
- access_level: open_access
  checksum: a8a1670e197484382e087be60f643945
  content_type: application/pdf
  creator: dernst
  date_created: 2026-01-12T09:30:15Z
  date_updated: 2026-01-12T09:30:15Z
  file_id: '20978'
  file_name: 2025_NatureComm_Maslarova.pdf
  file_size: 7629997
  relation: main_file
  success: 1
file_date_updated: 2026-01-12T09:30:15Z
has_accepted_license: '1'
intvolume: '        16'
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 9B861AAC-BA93-11EA-9121-9846C619BF3A
  name: NOMIS Fellowship Program
publication: Nature Communications
publication_identifier:
  eissn:
  - 2041-1723
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Spatiotemporal patterns differentiate hippocampal sharp-wave ripples from interictal
  epileptiform discharges in mice and humans
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 16
year: '2025'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
PlanS_conform: '1'
_id: '21057'
abstract:
- lang: eng
  text: Among the most puzzling early discoveries of JWST are “little red dots” (LRDs),
    compact red sources that host broad Balmer emission lines, and in many cases exhibit
    a “V-shaped” change in slope in the rest-optical. The physical properties of LRDs
    currently have order-of-magnitude uncertainties, because models to explain the
    continuum of these sources differ immensely. Here, we leverage the complete selection
    of red sources in the RUBIES program, supplemented with public PRISM spectra,
    to study the origin of this V shape. By fitting a broken power law with a flexible
    inflection point, we find that a large fraction of red Hα emitters at 2 < z <
    6 exhibit a strong change in slope, and that all strong inflections appear associated
    with the Balmer limit (0.3645 μm). Using a simple model of a reddened active galactic
    nucleus (AGN) with an unobscured scattered-light component, we demonstrate that
    the observed V shape in LRDs is unlikely to occur at any specific wavelength if
    the entire continuum is dominated by light from a power-law AGN continuum. In
    contrast, models with an intrinsic feature at the Balmer limit, such as those
    that are dominated by an evolved stellar population, can produce the observed
    spectral shapes, provided that a reddened component picks up sufficiently redward
    of the break. While no model can comfortably explain the full LRD spectral energy
    distribution, the common inflection location suggests that a single component
    consistently dominates the rest-frame UV optical in LRDs, and that this component
    is associated with T ∼ 10^4 K hydrogen.
acknowledgement: "This work is based in part on observations made with the NASA/ESA/CSA
  James Webb Space Telescope. The data were obtained from the Mikulski Archive for
  Space Telescopes at the Space Telescope Science Institute, which is operated by
  the Association of Universities for Research in Astronomy, Inc., under NASA contract
  NAS 5-03127 for JWST. The specific observations analyzed can be accessed via DOI:
  10.17909/0esg-h949. All of the data products presented herein were retrieved from
  the Dawn JWST Archive (DJA). DJA is an initiative of the Cosmic Dawn Center, which
  is funded by the Danish National Research Foundation under grant No. 140. We express
  gratitude toward the members of the GTO, GO, and DDT teams, whose public data we
  utilized in this work.\r\n\r\nSupport for this work was provided by The Brinson
  Foundation through a Brinson Prize Fellowship grant. Support for program No. 4233
  was provided by NASA through a grant from the Space Telescope Science Institute,
  which is operated by the Association of Universities for Research in Astronomy,
  Inc., under NASA contract NAS 5-03127. This research was supported by the International
  Space Science Institute (ISSI) in Bern, through ISSI International Team project
  No. 562. D.S. acknowledges helpful conversations with Xiaohui Fan and Jared Siegel
  that contributed to the quality of this work, in addition to aesthetic sign-off
  from Stephanie Permut on the colors of figures. T.B.M. was supported by a CIERA
  fellowship. The work of CCW is supported by NOIRLab, which is managed by the Association
  of Universities for Research in Astronomy (AURA) under a cooperative agreement with
  the National Science Foundation."
article_number: '118'
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: David J.
  full_name: Setton, David J.
  last_name: Setton
- first_name: Jenny E.
  full_name: Greene, Jenny E.
  last_name: Greene
- first_name: Anna
  full_name: de Graaff, Anna
  last_name: de Graaff
- first_name: Yilun 逸伦
  full_name: Ma, Yilun 逸伦
  last_name: Ma
- first_name: Joel
  full_name: Leja, Joel
  last_name: Leja
- first_name: Jorryt J
  full_name: Matthee, Jorryt J
  id: 7439a258-f3c0-11ec-9501-9df22fe06720
  last_name: Matthee
  orcid: 0000-0003-2871-127X
- first_name: Rachel
  full_name: Bezanson, Rachel
  last_name: Bezanson
- first_name: Leindert A.
  full_name: Boogaard, Leindert A.
  last_name: Boogaard
- first_name: Nikko J.
  full_name: Cleri, Nikko J.
  last_name: Cleri
- first_name: Harley
  full_name: Katz, Harley
  last_name: Katz
- first_name: Ivo
  full_name: Labbe, Ivo
  last_name: Labbe
- first_name: Michael V.
  full_name: Maseda, Michael V.
  last_name: Maseda
- first_name: Ian
  full_name: McConachie, Ian
  last_name: McConachie
- first_name: Tim B.
  full_name: Miller, Tim B.
  last_name: Miller
- first_name: Sedona H.
  full_name: Price, Sedona H.
  last_name: Price
- first_name: Katherine A.
  full_name: Suess, Katherine A.
  last_name: Suess
- first_name: Pieter
  full_name: van Dokkum, Pieter
  last_name: van Dokkum
- first_name: Bingjie 冰洁
  full_name: Wang 王, Bingjie 冰洁
  last_name: Wang 王
- first_name: Andrea
  full_name: Weibel, Andrea
  last_name: Weibel
- first_name: Katherine E.
  full_name: Whitaker, Katherine E.
  last_name: Whitaker
- first_name: Christina C.
  full_name: Williams, Christina C.
  last_name: Williams
citation:
  ama: 'Setton DJ, Greene JE, de Graaff A, et al. Little Red Dots at an inflection
    point: Ubiquitous v-shaped turnover consistently occurs at the Balmer limit. <i>The
    Astrophysical Journal</i>. 2025;995(1). doi:<a href="https://doi.org/10.3847/1538-4357/ae1500">10.3847/1538-4357/ae1500</a>'
  apa: 'Setton, D. J., Greene, J. E., de Graaff, A., Ma, Y. 逸伦, Leja, J., Matthee,
    J. J., … Williams, C. C. (2025). Little Red Dots at an inflection point: Ubiquitous
    v-shaped turnover consistently occurs at the Balmer limit. <i>The Astrophysical
    Journal</i>. IOP Publishing. <a href="https://doi.org/10.3847/1538-4357/ae1500">https://doi.org/10.3847/1538-4357/ae1500</a>'
  chicago: 'Setton, David J., Jenny E. Greene, Anna de Graaff, Yilun 逸伦 Ma, Joel Leja,
    Jorryt J Matthee, Rachel Bezanson, et al. “Little Red Dots at an Inflection Point:
    Ubiquitous v-Shaped Turnover Consistently Occurs at the Balmer Limit.” <i>The
    Astrophysical Journal</i>. IOP Publishing, 2025. <a href="https://doi.org/10.3847/1538-4357/ae1500">https://doi.org/10.3847/1538-4357/ae1500</a>.'
  ieee: 'D. J. Setton <i>et al.</i>, “Little Red Dots at an inflection point: Ubiquitous
    v-shaped turnover consistently occurs at the Balmer limit,” <i>The Astrophysical
    Journal</i>, vol. 995, no. 1. IOP Publishing, 2025.'
  ista: 'Setton DJ, Greene JE, de Graaff A, Ma Y逸伦, Leja J, Matthee JJ, Bezanson R,
    Boogaard LA, Cleri NJ, Katz H, Labbe I, Maseda MV, McConachie I, Miller TB, Price
    SH, Suess KA, van Dokkum P, Wang 王 B冰洁, Weibel A, Whitaker KE, Williams CC. 2025.
    Little Red Dots at an inflection point: Ubiquitous v-shaped turnover consistently
    occurs at the Balmer limit. The Astrophysical Journal. 995(1), 118.'
  mla: 'Setton, David J., et al. “Little Red Dots at an Inflection Point: Ubiquitous
    v-Shaped Turnover Consistently Occurs at the Balmer Limit.” <i>The Astrophysical
    Journal</i>, vol. 995, no. 1, 118, IOP Publishing, 2025, doi:<a href="https://doi.org/10.3847/1538-4357/ae1500">10.3847/1538-4357/ae1500</a>.'
  short: D.J. Setton, J.E. Greene, A. de Graaff, Y.逸伦 Ma, J. Leja, J.J. Matthee, R.
    Bezanson, L.A. Boogaard, N.J. Cleri, H. Katz, I. Labbe, M.V. Maseda, I. McConachie,
    T.B. Miller, S.H. Price, K.A. Suess, P. van Dokkum, B.冰洁 Wang 王, A. Weibel, K.E.
    Whitaker, C.C. Williams, The Astrophysical Journal 995 (2025).
date_created: 2026-01-28T15:21:47Z
date_published: 2025-12-09T00:00:00Z
date_updated: 2026-02-09T06:41:48Z
day: '09'
ddc:
- '520'
department:
- _id: JoMa
doi: 10.3847/1538-4357/ae1500
external_id:
  arxiv:
  - '2411.03424'
file:
- access_level: open_access
  checksum: 2a424eb43748a6370ff058c98adb15c6
  content_type: application/pdf
  creator: dernst
  date_created: 2026-02-09T06:39:23Z
  date_updated: 2026-02-09T06:39:23Z
  file_id: '21163'
  file_name: 2025_AstrophysicalJournal_Setton.pdf
  file_size: 1989640
  relation: main_file
  success: 1
file_date_updated: 2026-02-09T06:39:23Z
has_accepted_license: '1'
intvolume: '       995'
issue: '1'
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
publication: The Astrophysical Journal
publication_identifier:
  eissn:
  - 1538-4357
  issn:
  - 0004-637X
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Little Red Dots at an inflection point: Ubiquitous v-shaped turnover consistently
  occurs at the Balmer limit'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 995
year: '2025'
...
