---
_id: '6002'
abstract:
- lang: eng
  text: The Bogoliubov free energy functional is analysed. The functional serves as
    a model of a translation-invariant Bose gas at positive temperature. We prove
    the existence of minimizers in the case of repulsive interactions given by a sufficiently
    regular two-body potential. Furthermore, we prove the existence of a phase transition
    in this model and provide its phase diagram.
article_processing_charge: No
arxiv: 1
author:
- first_name: Marcin M
  full_name: Napiórkowski, Marcin M
  id: 4197AD04-F248-11E8-B48F-1D18A9856A87
  last_name: Napiórkowski
- first_name: Robin
  full_name: Reuvers, Robin
  last_name: Reuvers
- first_name: Jan Philip
  full_name: Solovej, Jan Philip
  last_name: Solovej
citation:
  ama: 'Napiórkowski MM, Reuvers R, Solovej JP. The Bogoliubov free energy functional
    I: Existence of minimizers and phase diagram. <i>Archive for Rational Mechanics
    and Analysis</i>. 2018;229(3):1037-1090. doi:<a href="https://doi.org/10.1007/s00205-018-1232-6">10.1007/s00205-018-1232-6</a>'
  apa: 'Napiórkowski, M. M., Reuvers, R., &#38; Solovej, J. P. (2018). The Bogoliubov
    free energy functional I: Existence of minimizers and phase diagram. <i>Archive
    for Rational Mechanics and Analysis</i>. Springer Nature. <a href="https://doi.org/10.1007/s00205-018-1232-6">https://doi.org/10.1007/s00205-018-1232-6</a>'
  chicago: 'Napiórkowski, Marcin M, Robin Reuvers, and Jan Philip Solovej. “The Bogoliubov
    Free Energy Functional I: Existence of Minimizers and Phase Diagram.” <i>Archive
    for Rational Mechanics and Analysis</i>. Springer Nature, 2018. <a href="https://doi.org/10.1007/s00205-018-1232-6">https://doi.org/10.1007/s00205-018-1232-6</a>.'
  ieee: 'M. M. Napiórkowski, R. Reuvers, and J. P. Solovej, “The Bogoliubov free energy
    functional I: Existence of minimizers and phase diagram,” <i>Archive for Rational
    Mechanics and Analysis</i>, vol. 229, no. 3. Springer Nature, pp. 1037–1090, 2018.'
  ista: 'Napiórkowski MM, Reuvers R, Solovej JP. 2018. The Bogoliubov free energy
    functional I: Existence of minimizers and phase diagram. Archive for Rational
    Mechanics and Analysis. 229(3), 1037–1090.'
  mla: 'Napiórkowski, Marcin M., et al. “The Bogoliubov Free Energy Functional I:
    Existence of Minimizers and Phase Diagram.” <i>Archive for Rational Mechanics
    and Analysis</i>, vol. 229, no. 3, Springer Nature, 2018, pp. 1037–90, doi:<a
    href="https://doi.org/10.1007/s00205-018-1232-6">10.1007/s00205-018-1232-6</a>.'
  short: M.M. Napiórkowski, R. Reuvers, J.P. Solovej, Archive for Rational Mechanics
    and Analysis 229 (2018) 1037–1090.
date_created: 2019-02-14T13:40:53Z
date_published: 2018-09-01T00:00:00Z
date_updated: 2025-04-15T08:26:15Z
day: '01'
department:
- _id: RoSe
doi: 10.1007/s00205-018-1232-6
external_id:
  arxiv:
  - '1511.05935'
  isi:
  - '000435367300003'
intvolume: '       229'
isi: 1
issue: '3'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1511.05935
month: '09'
oa: 1
oa_version: Preprint
page: 1037-1090
project:
- _id: 25C878CE-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P27533_N27
  name: Structure of the Excitation Spectrum for Many-Body Quantum Systems
publication: Archive for Rational Mechanics and Analysis
publication_identifier:
  eissn:
  - 1432-0673
  issn:
  - 0003-9527
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'The Bogoliubov free energy functional I: Existence of minimizers and phase
  diagram'
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 229
year: '2018'
...
---
_id: '397'
abstract:
- lang: eng
  text: 'Concurrent sets with range query operations are highly desirable in applications
    such as in-memory databases. However, few set implementations offer range queries.
    Known techniques for augmenting data structures with range queries (or operations
    that can be used to build range queries) have numerous problems that limit their
    usefulness. For example, they impose high overhead or rely heavily on garbage
    collection. In this work, we show how to augment data structures with highly efficient
    range queries, without relying on garbage collection. We identify a property of
    epoch-based memory reclamation algorithms that makes them ideal for implementing
    range queries, and produce three algorithms, which use locks, transactional memory
    and lock-free techniques, respectively. Our algorithms are applicable to more
    data structures than previous work, and are shown to be highly efficient on a
    large scale Intel system. '
alternative_title:
- PPoPP
article_processing_charge: No
author:
- first_name: Maya
  full_name: Arbel Raviv, Maya
  last_name: Arbel Raviv
- first_name: Trevor A
  full_name: Brown, Trevor A
  id: 3569F0A0-F248-11E8-B48F-1D18A9856A87
  last_name: Brown
citation:
  ama: 'Arbel Raviv M, Brown TA. Harnessing epoch-based reclamation for efficient
    range queries. In: Vol 53. ACM; 2018:14-27. doi:<a href="https://doi.org/10.1145/3178487.3178489">10.1145/3178487.3178489</a>'
  apa: 'Arbel Raviv, M., &#38; Brown, T. A. (2018). Harnessing epoch-based reclamation
    for efficient range queries (Vol. 53, pp. 14–27). Presented at the PPoPP: Principles
    and Practice of Parallel Programming, Vienna, Austria: ACM. <a href="https://doi.org/10.1145/3178487.3178489">https://doi.org/10.1145/3178487.3178489</a>'
  chicago: Arbel Raviv, Maya, and Trevor A Brown. “Harnessing Epoch-Based Reclamation
    for Efficient Range Queries,” 53:14–27. ACM, 2018. <a href="https://doi.org/10.1145/3178487.3178489">https://doi.org/10.1145/3178487.3178489</a>.
  ieee: 'M. Arbel Raviv and T. A. Brown, “Harnessing epoch-based reclamation for efficient
    range queries,” presented at the PPoPP: Principles and Practice of Parallel Programming,
    Vienna, Austria, 2018, vol. 53, no. 1, pp. 14–27.'
  ista: 'Arbel Raviv M, Brown TA. 2018. Harnessing epoch-based reclamation for efficient
    range queries. PPoPP: Principles and Practice of Parallel Programming, PPoPP,
    vol. 53, 14–27.'
  mla: Arbel Raviv, Maya, and Trevor A. Brown. <i>Harnessing Epoch-Based Reclamation
    for Efficient Range Queries</i>. Vol. 53, no. 1, ACM, 2018, pp. 14–27, doi:<a
    href="https://doi.org/10.1145/3178487.3178489">10.1145/3178487.3178489</a>.
  short: M. Arbel Raviv, T.A. Brown, in:, ACM, 2018, pp. 14–27.
conference:
  end_date: 2018-02-28
  location: Vienna, Austria
  name: 'PPoPP: Principles and Practice of Parallel Programming'
  start_date: 2018-02-24
date_created: 2018-12-11T11:46:14Z
date_published: 2018-02-10T00:00:00Z
date_updated: 2023-09-11T14:10:25Z
day: '10'
department:
- _id: DaAl
doi: 10.1145/3178487.3178489
external_id:
  isi:
  - '000446161100002'
intvolume: '        53'
isi: 1
issue: '1'
language:
- iso: eng
month: '02'
oa_version: None
page: 14 - 27
publication_identifier:
  isbn:
  - 978-1-4503-4982-6
publication_status: published
publisher: ACM
publist_id: '7430'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Harnessing epoch-based reclamation for efficient range queries
type: conference
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 53
year: '2018'
...
---
_id: '407'
abstract:
- lang: eng
  text: Isoprenoid cytokinins play a number of crucial roles in the regulation of
    plant growth and development. To study cytokinin receptor properties in plants,
    we designed and prepared fluorescent derivatives of 6-[(3-methylbut-2-en-1-yl)amino]purine
    (N6-isopentenyladenine, iP) with several fluorescent labels attached to the C2
    or N9 atom of the purine moiety via a 2- or 6-carbon linker. The fluorescent labels
    included dansyl (DS), fluorescein (FC), 7-nitrobenzofurazan (NBD), rhodamine B
    (RhoB), coumarin (Cou), 7-(diethylamino)coumarin (DEAC) and cyanine 5 dye (Cy5).
    All prepared compounds were screened for affinity for the Arabidopsis thaliana
    cytokinin receptor (CRE1/AHK4). Although the attachment of the fluorescent labels
    to iP via the linkers mostly disrupted binding to the receptor, several fluorescent
    derivatives interacted well. For this reason, three derivatives, two rhodamine
    B and one 4-chloro-7-nitrobenzofurazan labeled iP were tested for their interaction
    with CRE1/AHK4 and Zea mays cytokinin receptors in detail. We further showed that
    the three derivatives were able to activate transcription of cytokinin response
    regulator ARR5 in Arabidopsis seedlings. The activity of fluorescently labeled
    cytokinins was compared with corresponding 6-dimethylaminopurine fluorescently
    labeled negative controls. Selected rhodamine B C2-labeled compounds 17, 18 and
    4-chloro-7-nitrobenzofurazan N9-labeled compound 28 and their respective negative
    controls (19, 20 and 29, respectively) were used for in planta staining experiments
    in Arabidopsis thaliana cell suspension culture using live cell confocal microscopy.
acknowledgement: "This work was supported by the Ministry of Education Youth and Sports,
  Czech Republic (grant LO1204 from the National Program of Sustainability I and Agricultural
  Research ) and by Czech Science Foundation grants 16-04184S , 501/10/1450 and 13-39982S
  and by IGA projects IGA_PrF_2018_033 and IGA_PrF_2018_023 . We would like to thank
  Jarmila Balonová, Olga Hustáková and Miroslava Šubová for their skillful technical
  assistance and Mgr. Tomáš Pospíšil, Ph.D. for his measurement of 1 H NMR and analysis
  of some 2D NMR spectral data. \r\n"
article_processing_charge: No
author:
- first_name: Karolina
  full_name: Kubiasová, Karolina
  last_name: Kubiasová
- first_name: Václav
  full_name: Mik, Václav
  last_name: Mik
- first_name: Jaroslav
  full_name: Nisler, Jaroslav
  last_name: Nisler
- first_name: Martin
  full_name: Hönig, Martin
  last_name: Hönig
- first_name: Alexandra
  full_name: Husičková, Alexandra
  last_name: Husičková
- first_name: Lukáš
  full_name: Spíchal, Lukáš
  last_name: Spíchal
- first_name: Zuzana
  full_name: Pěkná, Zuzana
  last_name: Pěkná
- first_name: Olga
  full_name: Šamajová, Olga
  last_name: Šamajová
- first_name: Karel
  full_name: Doležal, Karel
  last_name: Doležal
- first_name: Ondřej
  full_name: Plíhal, Ondřej
  last_name: Plíhal
- first_name: Eva
  full_name: Benková, Eva
  id: 38F4F166-F248-11E8-B48F-1D18A9856A87
  last_name: Benková
  orcid: 0000-0002-8510-9739
- first_name: Miroslav
  full_name: Strnad, Miroslav
  last_name: Strnad
- first_name: Lucie
  full_name: Plíhalová, Lucie
  last_name: Plíhalová
citation:
  ama: Kubiasová K, Mik V, Nisler J, et al. Design, synthesis and perception of fluorescently
    labeled isoprenoid cytokinins. <i>Phytochemistry</i>. 2018;150:1-11. doi:<a href="https://doi.org/10.1016/j.phytochem.2018.02.015">10.1016/j.phytochem.2018.02.015</a>
  apa: Kubiasová, K., Mik, V., Nisler, J., Hönig, M., Husičková, A., Spíchal, L.,
    … Plíhalová, L. (2018). Design, synthesis and perception of fluorescently labeled
    isoprenoid cytokinins. <i>Phytochemistry</i>. Elsevier. <a href="https://doi.org/10.1016/j.phytochem.2018.02.015">https://doi.org/10.1016/j.phytochem.2018.02.015</a>
  chicago: Kubiasová, Karolina, Václav Mik, Jaroslav Nisler, Martin Hönig, Alexandra
    Husičková, Lukáš Spíchal, Zuzana Pěkná, et al. “Design, Synthesis and Perception
    of Fluorescently Labeled Isoprenoid Cytokinins.” <i>Phytochemistry</i>. Elsevier,
    2018. <a href="https://doi.org/10.1016/j.phytochem.2018.02.015">https://doi.org/10.1016/j.phytochem.2018.02.015</a>.
  ieee: K. Kubiasová <i>et al.</i>, “Design, synthesis and perception of fluorescently
    labeled isoprenoid cytokinins,” <i>Phytochemistry</i>, vol. 150. Elsevier, pp.
    1–11, 2018.
  ista: Kubiasová K, Mik V, Nisler J, Hönig M, Husičková A, Spíchal L, Pěkná Z, Šamajová
    O, Doležal K, Plíhal O, Benková E, Strnad M, Plíhalová L. 2018. Design, synthesis
    and perception of fluorescently labeled isoprenoid cytokinins. Phytochemistry.
    150, 1–11.
  mla: Kubiasová, Karolina, et al. “Design, Synthesis and Perception of Fluorescently
    Labeled Isoprenoid Cytokinins.” <i>Phytochemistry</i>, vol. 150, Elsevier, 2018,
    pp. 1–11, doi:<a href="https://doi.org/10.1016/j.phytochem.2018.02.015">10.1016/j.phytochem.2018.02.015</a>.
  short: K. Kubiasová, V. Mik, J. Nisler, M. Hönig, A. Husičková, L. Spíchal, Z. Pěkná,
    O. Šamajová, K. Doležal, O. Plíhal, E. Benková, M. Strnad, L. Plíhalová, Phytochemistry
    150 (2018) 1–11.
date_created: 2018-12-11T11:46:18Z
date_published: 2018-06-01T00:00:00Z
date_updated: 2023-09-11T12:53:11Z
day: '01'
department:
- _id: EvBe
doi: 10.1016/j.phytochem.2018.02.015
external_id:
  isi:
  - '000435623400001'
intvolume: '       150'
isi: 1
language:
- iso: eng
month: '06'
oa_version: None
page: 1-11
publication: Phytochemistry
publication_status: published
publisher: Elsevier
publist_id: '7422'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Design, synthesis and perception of fluorescently labeled isoprenoid cytokinins
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 150
year: '2018'
...
---
_id: '410'
abstract:
- lang: eng
  text: Lesion verification and quantification is traditionally done via histological
    examination of sectioned brains, a time-consuming process that relies heavily
    on manual estimation. Such methods are particularly problematic in posterior cortical
    regions (e.g. visual cortex), where sectioning leads to significant damage and
    distortion of tissue. Even more challenging is the post hoc localization of micro-electrodes,
    which relies on the same techniques, suffers from similar drawbacks and requires
    even higher precision. Here, we propose a new, simple method for quantitative
    lesion characterization and electrode localization that is less labor-intensive
    and yields more detailed results than conventional methods. We leverage staining
    techniques standard in electron microscopy with the use of commodity micro-CT
    imaging. We stain whole rat and zebra finch brains in osmium tetroxide, embed
    these in resin and scan entire brains in a micro-CT machine. The scans result
    in 3D reconstructions of the brains with section thickness dependent on sample
    size (12–15 and 5–6 microns for rat and zebra finch respectively) that can be
    segmented manually or automatically. Because the method captures the entire intact
    brain volume, comparisons within and across studies are more tractable, and the
    extent of lesions and electrodes may be studied with higher accuracy than with
    current methods.
article_number: '5184'
article_processing_charge: No
author:
- first_name: Javier
  full_name: Masís, Javier
  last_name: Masís
- first_name: David
  full_name: Mankus, David
  last_name: Mankus
- first_name: Steffen
  full_name: Wolff, Steffen
  last_name: Wolff
- first_name: Grigori
  full_name: Guitchounts, Grigori
  last_name: Guitchounts
- first_name: Maximilian A
  full_name: Jösch, Maximilian A
  id: 2BD278E6-F248-11E8-B48F-1D18A9856A87
  last_name: Jösch
  orcid: 0000-0002-3937-1330
- first_name: David
  full_name: Cox, David
  last_name: Cox
citation:
  ama: Masís J, Mankus D, Wolff S, Guitchounts G, Jösch MA, Cox D. A micro-CT-based
    method for quantitative brain lesion characterization and electrode localization.
    <i>Scientific Reports</i>. 2018;8(1). doi:<a href="https://doi.org/10.1038/s41598-018-23247-z">10.1038/s41598-018-23247-z</a>
  apa: Masís, J., Mankus, D., Wolff, S., Guitchounts, G., Jösch, M. A., &#38; Cox,
    D. (2018). A micro-CT-based method for quantitative brain lesion characterization
    and electrode localization. <i>Scientific Reports</i>. Nature Publishing Group.
    <a href="https://doi.org/10.1038/s41598-018-23247-z">https://doi.org/10.1038/s41598-018-23247-z</a>
  chicago: Masís, Javier, David Mankus, Steffen Wolff, Grigori Guitchounts, Maximilian
    A Jösch, and David Cox. “A Micro-CT-Based Method for Quantitative Brain Lesion
    Characterization and Electrode Localization.” <i>Scientific Reports</i>. Nature
    Publishing Group, 2018. <a href="https://doi.org/10.1038/s41598-018-23247-z">https://doi.org/10.1038/s41598-018-23247-z</a>.
  ieee: J. Masís, D. Mankus, S. Wolff, G. Guitchounts, M. A. Jösch, and D. Cox, “A
    micro-CT-based method for quantitative brain lesion characterization and electrode
    localization,” <i>Scientific Reports</i>, vol. 8, no. 1. Nature Publishing Group,
    2018.
  ista: Masís J, Mankus D, Wolff S, Guitchounts G, Jösch MA, Cox D. 2018. A micro-CT-based
    method for quantitative brain lesion characterization and electrode localization.
    Scientific Reports. 8(1), 5184.
  mla: Masís, Javier, et al. “A Micro-CT-Based Method for Quantitative Brain Lesion
    Characterization and Electrode Localization.” <i>Scientific Reports</i>, vol.
    8, no. 1, 5184, Nature Publishing Group, 2018, doi:<a href="https://doi.org/10.1038/s41598-018-23247-z">10.1038/s41598-018-23247-z</a>.
  short: J. Masís, D. Mankus, S. Wolff, G. Guitchounts, M.A. Jösch, D. Cox, Scientific
    Reports 8 (2018).
date_created: 2018-12-11T11:46:19Z
date_published: 2018-03-26T00:00:00Z
date_updated: 2023-09-08T11:48:39Z
day: '26'
ddc:
- '571'
- '572'
department:
- _id: MaJö
doi: 10.1038/s41598-018-23247-z
external_id:
  isi:
  - '000428234100005'
file:
- access_level: open_access
  checksum: 653fcb852f899c75b00ceee2a670d738
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:10:42Z
  date_updated: 2020-07-14T12:46:23Z
  file_id: '4831'
  file_name: IST-2018-994-v1+1_2018_Joesch_A-micro-CT-based.pdf
  file_size: 2359430
  relation: main_file
file_date_updated: 2020-07-14T12:46:23Z
has_accepted_license: '1'
intvolume: '         8'
isi: 1
issue: '1'
language:
- iso: eng
month: '03'
oa: 1
oa_version: Published Version
publication: Scientific Reports
publication_status: published
publisher: Nature Publishing Group
publist_id: '7419'
pubrep_id: '994'
quality_controlled: '1'
scopus_import: '1'
status: public
title: A micro-CT-based method for quantitative brain lesion characterization and
  electrode localization
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 8
year: '2018'
...
---
_id: '17679'
abstract:
- lang: eng
  text: We study low-density axisymmetric accretion flows onto black holes (BHs) with
    two-dimensional hydrodynamical simulations, adopting the α-viscosity prescription.
    When the gas angular momentum is low enough to form a rotationally supported disk
    within the Bondi radius (RB), we find a global steady accretion solution. The
    solution consists of a rotational equilibrium distribution at r∼RB, where the
    density follows ρ∝(1+RB/r)^3/2, surrounding a geometrically thick and optically
    thin accretion disk at the centrifugal radius, where thermal energy generated
    by viscosity is transported via strong convection. Physical properties of the
    inner solution agree with those expected in convection-dominated accretion flows
    (CDAF; ρ∝r^−1/2). In the inner CDAF solution, the gas inflow rate decreases towards
    the center due to convection (M˙∝r), and the net accretion rate (including both
    inflows and outflows) is strongly suppressed by several orders of magnitude from
    the Bondi accretion rate M˙B The net accretion rate depends on the viscous strength,
    following M˙/M˙B∝(α/0.01)^0.6. This solution holds for low accretion rates of
    M˙B/M˙Edd<10^−3 having minimal radiation cooling, where M˙Edd is the Eddington
    rate. In a hot plasma at the bottom (r<10^−3 RB), thermal conduction would dominate
    the convective energy flux. Since suppression of the accretion by convection ceases,
    the final BH feeding rate is found to be M˙/M˙B∼10^−3−10^−2. This rate is as low
    as M˙/M˙Edd∼10^−7−10^−6 inferred for SgrA∗ and the nuclear BHs in M31 and M87,
    and can explain the low luminosities in these sources, without invoking any feedback
    mechanism.
article_processing_charge: No
article_type: original
author:
- first_name: Kohei
  full_name: Inayoshi, Kohei
  last_name: Inayoshi
- first_name: Jeremiah P
  full_name: Ostriker, Jeremiah P
  last_name: Ostriker
- first_name: Zoltán
  full_name: Haiman, Zoltán
  id: 7c006e8c-cc0d-11ee-8322-cb904ef76f36
  last_name: Haiman
- first_name: Rolf
  full_name: Kuiper, Rolf
  last_name: Kuiper
citation:
  ama: Inayoshi K, Ostriker JP, Haiman Z, Kuiper R. Low-density, radiatively inefficient
    rotating-accretion flow on to a black hole. <i>Monthly Notices of the Royal Astronomical
    Society</i>. 2018;476(1):1412-1426. doi:<a href="https://doi.org/10.1093/mnras/sty276">10.1093/mnras/sty276</a>
  apa: Inayoshi, K., Ostriker, J. P., Haiman, Z., &#38; Kuiper, R. (2018). Low-density,
    radiatively inefficient rotating-accretion flow on to a black hole. <i>Monthly
    Notices of the Royal Astronomical Society</i>. Oxford University Press. <a href="https://doi.org/10.1093/mnras/sty276">https://doi.org/10.1093/mnras/sty276</a>
  chicago: Inayoshi, Kohei, Jeremiah P Ostriker, Zoltán Haiman, and Rolf Kuiper. “Low-Density,
    Radiatively Inefficient Rotating-Accretion Flow on to a Black Hole.” <i>Monthly
    Notices of the Royal Astronomical Society</i>. Oxford University Press, 2018.
    <a href="https://doi.org/10.1093/mnras/sty276">https://doi.org/10.1093/mnras/sty276</a>.
  ieee: K. Inayoshi, J. P. Ostriker, Z. Haiman, and R. Kuiper, “Low-density, radiatively
    inefficient rotating-accretion flow on to a black hole,” <i>Monthly Notices of
    the Royal Astronomical Society</i>, vol. 476, no. 1. Oxford University Press,
    pp. 1412–1426, 2018.
  ista: Inayoshi K, Ostriker JP, Haiman Z, Kuiper R. 2018. Low-density, radiatively
    inefficient rotating-accretion flow on to a black hole. Monthly Notices of the
    Royal Astronomical Society. 476(1), 1412–1426.
  mla: Inayoshi, Kohei, et al. “Low-Density, Radiatively Inefficient Rotating-Accretion
    Flow on to a Black Hole.” <i>Monthly Notices of the Royal Astronomical Society</i>,
    vol. 476, no. 1, Oxford University Press, 2018, pp. 1412–26, doi:<a href="https://doi.org/10.1093/mnras/sty276">10.1093/mnras/sty276</a>.
  short: K. Inayoshi, J.P. Ostriker, Z. Haiman, R. Kuiper, Monthly Notices of the
    Royal Astronomical Society 476 (2018) 1412–1426.
date_created: 2024-09-06T08:05:18Z
date_published: 2018-02-01T00:00:00Z
date_updated: 2024-09-25T08:57:35Z
day: '01'
doi: 10.1093/mnras/sty276
extern: '1'
intvolume: '       476'
issue: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1093/mnras/sty276
month: '02'
oa: 1
oa_version: Published Version
page: 1412-1426
publication: Monthly Notices of the Royal Astronomical Society
publication_identifier:
  issn:
  - 0035-8711
  - 1365-2966
publication_status: published
publisher: Oxford University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Low-density, radiatively inefficient rotating-accretion flow on to a black
  hole
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 476
year: '2018'
...
---
_id: '17687'
abstract:
- lang: eng
  text: We propose the formation of massive pristine dark-matter (DM) halos with masses
    of ∼10^8 M⊙, due to the dynamical effects of frequent mergers in rare regions
    of the Universe with high baryonic streaming velocity relative to DM. Since the
    streaming motion prevents gas collapse into DM halos and delays prior star formation
    episodes, the gas remains metal-free until the halo virial temperatures ≳2×10^4
    K. The minimum cooling mass of DM halos is boosted by a factor of ∼10−30 because
    frequent major mergers of halos further inhibit gas collapse. We use Monte Carlo
    merger trees to simulate the DM assembly history under a streaming velocity of
    twice the root-mean-square value, and estimate the number density of massive DM
    halos containing pristine gas as ≃10^−4 cMpc^−3. When the gas infall begins, efficient
    Lyα cooling drives cold streams penetrating inside the halo and feeding a central
    galactic disk. When one stream collides with the disk, strong shock forms a dense
    and hot gas cloud, where the gas never forms H2 molecules due to effective collisional
    dissociation. As a result, a massive gas cloud forms by gravitational instability
    and collapses directly into a massive black hole (BH) with M∙∼10^5 M⊙. Almost
    simultaneously, a galaxy with M⋆,tot∼10^6 M⊙ composed of Population III stars
    forms in the nuclear region. If the typical stellar mass is as high as ∼100 M⊙,
    the galaxy could be detected with the James Webb Space Telescope even at z≳15.
    These massive seed BHs would be fed by continuous gas accretion from the host
    galaxy, and grow to be bright quasars observed at z≳6.
article_processing_charge: No
article_type: original
author:
- first_name: Kohei
  full_name: Inayoshi, Kohei
  last_name: Inayoshi
- first_name: Miao
  full_name: Li, Miao
  last_name: Li
- first_name: Zoltán
  full_name: Haiman, Zoltán
  id: 7c006e8c-cc0d-11ee-8322-cb904ef76f36
  last_name: Haiman
citation:
  ama: Inayoshi K, Li M, Haiman Z. Massive black hole and Population III galaxy formation
    in overmassive dark-matter haloes with violent merger histories. <i>Monthly Notices
    of the Royal Astronomical Society</i>. 2018;479(3):4017-4027. doi:<a href="https://doi.org/10.1093/mnras/sty1720">10.1093/mnras/sty1720</a>
  apa: Inayoshi, K., Li, M., &#38; Haiman, Z. (2018). Massive black hole and Population
    III galaxy formation in overmassive dark-matter haloes with violent merger histories.
    <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford University Press.
    <a href="https://doi.org/10.1093/mnras/sty1720">https://doi.org/10.1093/mnras/sty1720</a>
  chicago: Inayoshi, Kohei, Miao Li, and Zoltán Haiman. “Massive Black Hole and Population
    III Galaxy Formation in Overmassive Dark-Matter Haloes with Violent Merger Histories.”
    <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford University Press,
    2018. <a href="https://doi.org/10.1093/mnras/sty1720">https://doi.org/10.1093/mnras/sty1720</a>.
  ieee: K. Inayoshi, M. Li, and Z. Haiman, “Massive black hole and Population III
    galaxy formation in overmassive dark-matter haloes with violent merger histories,”
    <i>Monthly Notices of the Royal Astronomical Society</i>, vol. 479, no. 3. Oxford
    University Press, pp. 4017–4027, 2018.
  ista: Inayoshi K, Li M, Haiman Z. 2018. Massive black hole and Population III galaxy
    formation in overmassive dark-matter haloes with violent merger histories. Monthly
    Notices of the Royal Astronomical Society. 479(3), 4017–4027.
  mla: Inayoshi, Kohei, et al. “Massive Black Hole and Population III Galaxy Formation
    in Overmassive Dark-Matter Haloes with Violent Merger Histories.” <i>Monthly Notices
    of the Royal Astronomical Society</i>, vol. 479, no. 3, Oxford University Press,
    2018, pp. 4017–27, doi:<a href="https://doi.org/10.1093/mnras/sty1720">10.1093/mnras/sty1720</a>.
  short: K. Inayoshi, M. Li, Z. Haiman, Monthly Notices of the Royal Astronomical
    Society 479 (2018) 4017–4027.
date_created: 2024-09-06T08:22:23Z
date_published: 2018-06-30T00:00:00Z
date_updated: 2024-09-25T09:46:30Z
day: '30'
doi: 10.1093/mnras/sty1720
extern: '1'
intvolume: '       479'
issue: '3'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1093/mnras/sty1720
month: '06'
oa: 1
oa_version: Published Version
page: 4017-4027
publication: Monthly Notices of the Royal Astronomical Society
publication_identifier:
  issn:
  - 0035-8711
  - 1365-2966
publication_status: published
publisher: Oxford University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Massive black hole and Population III galaxy formation in overmassive dark-matter
  haloes with violent merger histories
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 479
year: '2018'
...
---
_id: '76'
abstract:
- lang: eng
  text: 'Consider a fully-connected synchronous distributed system consisting of n
    nodes, where up to f nodes may be faulty and every node starts in an arbitrary
    initial state. In the synchronous C-counting problem, all nodes need to eventually
    agree on a counter that is increased by one modulo C in each round for given C&gt;1.
    In the self-stabilising firing squad problem, the task is to eventually guarantee
    that all non-faulty nodes have simultaneous responses to external inputs: if a
    subset of the correct nodes receive an external “go” signal as input, then all
    correct nodes should agree on a round (in the not-too-distant future) in which
    to jointly output a “fire” signal. Moreover, no node should generate a “fire”
    signal without some correct node having previously received a “go” signal as input.
    We present a framework reducing both tasks to binary consensus at very small cost.
    For example, we obtain a deterministic algorithm for self-stabilising Byzantine
    firing squads with optimal resilience f&lt;n/3, asymptotically optimal stabilisation
    and response time O(f), and message size O(log f). As our framework does not restrict
    the type of consensus routines used, we also obtain efficient randomised solutions.'
article_processing_charge: Yes (via OA deal)
author:
- first_name: Christoph
  full_name: Lenzen, Christoph
  last_name: Lenzen
- first_name: Joel
  full_name: Rybicki, Joel
  id: 334EFD2E-F248-11E8-B48F-1D18A9856A87
  last_name: Rybicki
  orcid: 0000-0002-6432-6646
citation:
  ama: Lenzen C, Rybicki J. Near-optimal self-stabilising counting and firing squads.
    <i>Distributed Computing</i>. 2018. doi:<a href="https://doi.org/10.1007/s00446-018-0342-6">10.1007/s00446-018-0342-6</a>
  apa: Lenzen, C., &#38; Rybicki, J. (2018). Near-optimal self-stabilising counting
    and firing squads. <i>Distributed Computing</i>. Springer. <a href="https://doi.org/10.1007/s00446-018-0342-6">https://doi.org/10.1007/s00446-018-0342-6</a>
  chicago: Lenzen, Christoph, and Joel Rybicki. “Near-Optimal Self-Stabilising Counting
    and Firing Squads.” <i>Distributed Computing</i>. Springer, 2018. <a href="https://doi.org/10.1007/s00446-018-0342-6">https://doi.org/10.1007/s00446-018-0342-6</a>.
  ieee: C. Lenzen and J. Rybicki, “Near-optimal self-stabilising counting and firing
    squads,” <i>Distributed Computing</i>. Springer, 2018.
  ista: Lenzen C, Rybicki J. 2018. Near-optimal self-stabilising counting and firing
    squads. Distributed Computing.
  mla: Lenzen, Christoph, and Joel Rybicki. “Near-Optimal Self-Stabilising Counting
    and Firing Squads.” <i>Distributed Computing</i>, Springer, 2018, doi:<a href="https://doi.org/10.1007/s00446-018-0342-6">10.1007/s00446-018-0342-6</a>.
  short: C. Lenzen, J. Rybicki, Distributed Computing (2018).
corr_author: '1'
date_created: 2018-12-11T11:44:30Z
date_published: 2018-09-12T00:00:00Z
date_updated: 2025-04-15T06:53:15Z
day: '12'
ddc:
- '000'
department:
- _id: DaAl
doi: 10.1007/s00446-018-0342-6
external_id:
  isi:
  - '000475627800005'
file:
- access_level: open_access
  checksum: 872db70bba9b401500abe3c6ae2f1a61
  content_type: application/pdf
  creator: dernst
  date_created: 2018-12-17T14:21:22Z
  date_updated: 2020-07-14T12:48:01Z
  file_id: '5711'
  file_name: 2018_DistributedComputing_Lenzen.pdf
  file_size: 799337
  relation: main_file
file_date_updated: 2020-07-14T12:48:01Z
has_accepted_license: '1'
isi: 1
language:
- iso: eng
month: '09'
oa: 1
oa_version: Published Version
project:
- _id: B67AFEDC-15C9-11EA-A837-991A96BB2854
  name: IST Austria Open Access Fund
publication: Distributed Computing
publication_status: published
publisher: Springer
publist_id: '7978'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Near-optimal self-stabilising counting and firing squads
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
year: '2018'
...
---
_id: '7713'
abstract:
- lang: eng
  text: There are mean differences in complex traits among global human populations.
    We hypothesize that part of the phenotypic differentiation is due to natural selection.
    To address this hypothesis, we assess the differentiation in allele frequencies
    of trait-associated SNPs among African, Eastern Asian, and European populations
    for ten complex traits using data of large sample size (up to ~405,000). We show
    that SNPs associated with height (P=2.46×10−5), waist-to-hip ratio (P=2.77×10−4),
    and schizophrenia (P=3.96×10−5) are significantly more differentiated among populations
    than matched “control” SNPs, suggesting that these trait-associated SNPs have
    undergone natural selection. We further find that SNPs associated with height
    (P=2.01×10−6) and schizophrenia (P=5.16×10−18) show significantly higher variance
    in linkage disequilibrium (LD) scores across populations than control SNPs. Our
    results support the hypothesis that natural selection has shaped the genetic differentiation
    of complex traits, such as height and schizophrenia, among worldwide populations.
article_number: '1865'
article_processing_charge: No
article_type: original
author:
- first_name: Jing
  full_name: Guo, Jing
  last_name: Guo
- first_name: Yang
  full_name: Wu, Yang
  last_name: Wu
- first_name: Zhihong
  full_name: Zhu, Zhihong
  last_name: Zhu
- first_name: Zhili
  full_name: Zheng, Zhili
  last_name: Zheng
- first_name: Maciej
  full_name: Trzaskowski, Maciej
  last_name: Trzaskowski
- first_name: Jian
  full_name: Zeng, Jian
  last_name: Zeng
- first_name: Matthew Richard
  full_name: Robinson, Matthew Richard
  id: E5D42276-F5DA-11E9-8E24-6303E6697425
  last_name: Robinson
  orcid: 0000-0001-8982-8813
- first_name: Peter M.
  full_name: Visscher, Peter M.
  last_name: Visscher
- first_name: Jian
  full_name: Yang, Jian
  last_name: Yang
citation:
  ama: Guo J, Wu Y, Zhu Z, et al. Global genetic differentiation of complex traits
    shaped by natural selection in humans. <i>Nature Communications</i>. 2018;9. doi:<a
    href="https://doi.org/10.1038/s41467-018-04191-y">10.1038/s41467-018-04191-y</a>
  apa: Guo, J., Wu, Y., Zhu, Z., Zheng, Z., Trzaskowski, M., Zeng, J., … Yang, J.
    (2018). Global genetic differentiation of complex traits shaped by natural selection
    in humans. <i>Nature Communications</i>. Springer Nature. <a href="https://doi.org/10.1038/s41467-018-04191-y">https://doi.org/10.1038/s41467-018-04191-y</a>
  chicago: Guo, Jing, Yang Wu, Zhihong Zhu, Zhili Zheng, Maciej Trzaskowski, Jian
    Zeng, Matthew Richard Robinson, Peter M. Visscher, and Jian Yang. “Global Genetic
    Differentiation of Complex Traits Shaped by Natural Selection in Humans.” <i>Nature
    Communications</i>. Springer Nature, 2018. <a href="https://doi.org/10.1038/s41467-018-04191-y">https://doi.org/10.1038/s41467-018-04191-y</a>.
  ieee: J. Guo <i>et al.</i>, “Global genetic differentiation of complex traits shaped
    by natural selection in humans,” <i>Nature Communications</i>, vol. 9. Springer
    Nature, 2018.
  ista: Guo J, Wu Y, Zhu Z, Zheng Z, Trzaskowski M, Zeng J, Robinson MR, Visscher
    PM, Yang J. 2018. Global genetic differentiation of complex traits shaped by natural
    selection in humans. Nature Communications. 9, 1865.
  mla: Guo, Jing, et al. “Global Genetic Differentiation of Complex Traits Shaped
    by Natural Selection in Humans.” <i>Nature Communications</i>, vol. 9, 1865, Springer
    Nature, 2018, doi:<a href="https://doi.org/10.1038/s41467-018-04191-y">10.1038/s41467-018-04191-y</a>.
  short: J. Guo, Y. Wu, Z. Zhu, Z. Zheng, M. Trzaskowski, J. Zeng, M.R. Robinson,
    P.M. Visscher, J. Yang, Nature Communications 9 (2018).
date_created: 2020-04-30T10:41:36Z
date_published: 2018-05-14T00:00:00Z
date_updated: 2021-01-12T08:15:02Z
day: '14'
doi: 10.1038/s41467-018-04191-y
extern: '1'
intvolume: '         9'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1038/s41467-018-04191-y
month: '05'
oa: 1
oa_version: Published Version
publication: Nature Communications
publication_identifier:
  issn:
  - 2041-1723
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
status: public
title: Global genetic differentiation of complex traits shaped by natural selection
  in humans
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 9
year: '2018'
...
---
_id: '7716'
abstract:
- lang: eng
  text: Genomic prediction has the potential to contribute to precision medicine.
    However, to date, the utility of such predictors is limited due to low accuracy
    for most traits. Here theory and simulation study are used to demonstrate that
    widespread pleiotropy among phenotypes can be utilised to improve genomic risk
    prediction. We show how a genetic predictor can be created as a weighted index
    that combines published genome-wide association study (GWAS) summary statistics
    across many different traits. We apply this framework to predict risk of schizophrenia
    and bipolar disorder in the Psychiatric Genomics consortium data, finding substantial
    heterogeneity in prediction accuracy increases across cohorts. For six additional
    phenotypes in the UK Biobank data, we find increases in prediction accuracy ranging
    from 0.7% for height to 47% for type 2 diabetes, when using a multi-trait predictor
    that combines published summary statistics from multiple traits, as compared to
    a predictor based only on one trait.
article_number: '989'
article_processing_charge: No
article_type: original
author:
- first_name: Robert M.
  full_name: Maier, Robert M.
  last_name: Maier
- first_name: Zhihong
  full_name: Zhu, Zhihong
  last_name: Zhu
- first_name: Sang Hong
  full_name: Lee, Sang Hong
  last_name: Lee
- first_name: Maciej
  full_name: Trzaskowski, Maciej
  last_name: Trzaskowski
- first_name: Douglas M.
  full_name: Ruderfer, Douglas M.
  last_name: Ruderfer
- first_name: Eli A.
  full_name: Stahl, Eli A.
  last_name: Stahl
- first_name: Stephan
  full_name: Ripke, Stephan
  last_name: Ripke
- first_name: Naomi R.
  full_name: Wray, Naomi R.
  last_name: Wray
- first_name: Jian
  full_name: Yang, Jian
  last_name: Yang
- first_name: Peter M.
  full_name: Visscher, Peter M.
  last_name: Visscher
- first_name: Matthew Richard
  full_name: Robinson, Matthew Richard
  id: E5D42276-F5DA-11E9-8E24-6303E6697425
  last_name: Robinson
  orcid: 0000-0001-8982-8813
citation:
  ama: Maier RM, Zhu Z, Lee SH, et al. Improving genetic prediction by leveraging
    genetic correlations among human diseases and traits. <i>Nature Communications</i>.
    2018;9. doi:<a href="https://doi.org/10.1038/s41467-017-02769-6">10.1038/s41467-017-02769-6</a>
  apa: Maier, R. M., Zhu, Z., Lee, S. H., Trzaskowski, M., Ruderfer, D. M., Stahl,
    E. A., … Robinson, M. R. (2018). Improving genetic prediction by leveraging genetic
    correlations among human diseases and traits. <i>Nature Communications</i>. Springer
    Nature. <a href="https://doi.org/10.1038/s41467-017-02769-6">https://doi.org/10.1038/s41467-017-02769-6</a>
  chicago: Maier, Robert M., Zhihong Zhu, Sang Hong Lee, Maciej Trzaskowski, Douglas
    M. Ruderfer, Eli A. Stahl, Stephan Ripke, et al. “Improving Genetic Prediction
    by Leveraging Genetic Correlations among Human Diseases and Traits.” <i>Nature
    Communications</i>. Springer Nature, 2018. <a href="https://doi.org/10.1038/s41467-017-02769-6">https://doi.org/10.1038/s41467-017-02769-6</a>.
  ieee: R. M. Maier <i>et al.</i>, “Improving genetic prediction by leveraging genetic
    correlations among human diseases and traits,” <i>Nature Communications</i>, vol.
    9. Springer Nature, 2018.
  ista: Maier RM, Zhu Z, Lee SH, Trzaskowski M, Ruderfer DM, Stahl EA, Ripke S, Wray
    NR, Yang J, Visscher PM, Robinson MR. 2018. Improving genetic prediction by leveraging
    genetic correlations among human diseases and traits. Nature Communications. 9,
    989.
  mla: Maier, Robert M., et al. “Improving Genetic Prediction by Leveraging Genetic
    Correlations among Human Diseases and Traits.” <i>Nature Communications</i>, vol.
    9, 989, Springer Nature, 2018, doi:<a href="https://doi.org/10.1038/s41467-017-02769-6">10.1038/s41467-017-02769-6</a>.
  short: R.M. Maier, Z. Zhu, S.H. Lee, M. Trzaskowski, D.M. Ruderfer, E.A. Stahl,
    S. Ripke, N.R. Wray, J. Yang, P.M. Visscher, M.R. Robinson, Nature Communications
    9 (2018).
date_created: 2020-04-30T10:42:29Z
date_published: 2018-03-07T00:00:00Z
date_updated: 2021-01-12T08:15:03Z
day: '07'
doi: 10.1038/s41467-017-02769-6
extern: '1'
intvolume: '         9'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1038/s41467-017-02769-6
month: '03'
oa: 1
oa_version: Published Version
publication: Nature Communications
publication_identifier:
  issn:
  - 2041-1723
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
status: public
title: Improving genetic prediction by leveraging genetic correlations among human
  diseases and traits
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 9
year: '2018'
...
---
_id: '7722'
abstract:
- lang: eng
  text: We develop a Bayesian mixed linear model that simultaneously estimates single-nucleotide
    polymorphism (SNP)-based heritability, polygenicity (proportion of SNPs with nonzero
    effects), and the relationship between SNP effect size and minor allele frequency
    for complex traits in conventionally unrelated individuals using genome-wide SNP
    data. We apply the method to 28 complex traits in the UK Biobank data (N = 126,752)
    and show that on average, 6% of SNPs have nonzero effects, which in total explain
    22% of phenotypic variance. We detect significant (P < 0.05/28) signatures of
    natural selection in the genetic architecture of 23 traits, including reproductive,
    cardiovascular, and anthropometric traits, as well as educational attainment.
    The significant estimates of the relationship between effect size and minor allele
    frequency in complex traits are consistent with a model of negative (or purifying)
    selection, as confirmed by forward simulation. We conclude that negative selection
    acts pervasively on the genetic variants associated with human complex traits.
article_processing_charge: No
article_type: original
author:
- first_name: Jian
  full_name: Zeng, Jian
  last_name: Zeng
- first_name: Ronald
  full_name: de Vlaming, Ronald
  last_name: de Vlaming
- first_name: Yang
  full_name: Wu, Yang
  last_name: Wu
- first_name: Matthew Richard
  full_name: Robinson, Matthew Richard
  id: E5D42276-F5DA-11E9-8E24-6303E6697425
  last_name: Robinson
  orcid: 0000-0001-8982-8813
- first_name: Luke R.
  full_name: Lloyd-Jones, Luke R.
  last_name: Lloyd-Jones
- first_name: Loic
  full_name: Yengo, Loic
  last_name: Yengo
- first_name: Chloe X.
  full_name: Yap, Chloe X.
  last_name: Yap
- first_name: Angli
  full_name: Xue, Angli
  last_name: Xue
- first_name: Julia
  full_name: Sidorenko, Julia
  last_name: Sidorenko
- first_name: Allan F.
  full_name: McRae, Allan F.
  last_name: McRae
- first_name: Joseph E.
  full_name: Powell, Joseph E.
  last_name: Powell
- first_name: Grant W.
  full_name: Montgomery, Grant W.
  last_name: Montgomery
- first_name: Andres
  full_name: Metspalu, Andres
  last_name: Metspalu
- first_name: Tonu
  full_name: Esko, Tonu
  last_name: Esko
- first_name: Greg
  full_name: Gibson, Greg
  last_name: Gibson
- first_name: Naomi R.
  full_name: Wray, Naomi R.
  last_name: Wray
- first_name: Peter M.
  full_name: Visscher, Peter M.
  last_name: Visscher
- first_name: Jian
  full_name: Yang, Jian
  last_name: Yang
citation:
  ama: Zeng J, de Vlaming R, Wu Y, et al. Signatures of negative selection in the
    genetic architecture of human complex traits. <i>Nature Genetics</i>. 2018;50(5):746-753.
    doi:<a href="https://doi.org/10.1038/s41588-018-0101-4">10.1038/s41588-018-0101-4</a>
  apa: Zeng, J., de Vlaming, R., Wu, Y., Robinson, M. R., Lloyd-Jones, L. R., Yengo,
    L., … Yang, J. (2018). Signatures of negative selection in the genetic architecture
    of human complex traits. <i>Nature Genetics</i>. Springer Nature. <a href="https://doi.org/10.1038/s41588-018-0101-4">https://doi.org/10.1038/s41588-018-0101-4</a>
  chicago: Zeng, Jian, Ronald de Vlaming, Yang Wu, Matthew Richard Robinson, Luke
    R. Lloyd-Jones, Loic Yengo, Chloe X. Yap, et al. “Signatures of Negative Selection
    in the Genetic Architecture of Human Complex Traits.” <i>Nature Genetics</i>.
    Springer Nature, 2018. <a href="https://doi.org/10.1038/s41588-018-0101-4">https://doi.org/10.1038/s41588-018-0101-4</a>.
  ieee: J. Zeng <i>et al.</i>, “Signatures of negative selection in the genetic architecture
    of human complex traits,” <i>Nature Genetics</i>, vol. 50, no. 5. Springer Nature,
    pp. 746–753, 2018.
  ista: Zeng J, de Vlaming R, Wu Y, Robinson MR, Lloyd-Jones LR, Yengo L, Yap CX,
    Xue A, Sidorenko J, McRae AF, Powell JE, Montgomery GW, Metspalu A, Esko T, Gibson
    G, Wray NR, Visscher PM, Yang J. 2018. Signatures of negative selection in the
    genetic architecture of human complex traits. Nature Genetics. 50(5), 746–753.
  mla: Zeng, Jian, et al. “Signatures of Negative Selection in the Genetic Architecture
    of Human Complex Traits.” <i>Nature Genetics</i>, vol. 50, no. 5, Springer Nature,
    2018, pp. 746–53, doi:<a href="https://doi.org/10.1038/s41588-018-0101-4">10.1038/s41588-018-0101-4</a>.
  short: J. Zeng, R. de Vlaming, Y. Wu, M.R. Robinson, L.R. Lloyd-Jones, L. Yengo,
    C.X. Yap, A. Xue, J. Sidorenko, A.F. McRae, J.E. Powell, G.W. Montgomery, A. Metspalu,
    T. Esko, G. Gibson, N.R. Wray, P.M. Visscher, J. Yang, Nature Genetics 50 (2018)
    746–753.
date_created: 2020-04-30T10:44:57Z
date_published: 2018-04-16T00:00:00Z
date_updated: 2021-01-12T08:15:06Z
day: '16'
doi: 10.1038/s41588-018-0101-4
extern: '1'
intvolume: '        50'
issue: '5'
language:
- iso: eng
month: '04'
oa_version: None
page: 746-753
publication: Nature Genetics
publication_identifier:
  issn:
  - 1061-4036
  - 1546-1718
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
status: public
title: Signatures of negative selection in the genetic architecture of human complex
  traits
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 50
year: '2018'
...
---
_id: '78'
abstract:
- lang: eng
  text: We provide a procedure for detecting the sub-segments of an incrementally
    observed Boolean signal ω that match a given temporal pattern ϕ. As a pattern
    specification language, we use timed regular expressions, a formalism well-suited
    for expressing properties of concurrent asynchronous behaviors embedded in metric
    time. We construct a timed automaton accepting the timed language denoted by ϕ
    and modify it slightly for the purpose of matching. We then apply zone-based reachability
    computation to this automaton while it reads ω, and retrieve all the matching
    segments from the results. Since the procedure is automaton based, it can be applied
    to patterns specified by other formalisms such as timed temporal logics reducible
    to timed automata or directly encoded as timed automata. The procedure has been
    implemented and its performance on synthetic examples is demonstrated.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Alexey
  full_name: Bakhirkin, Alexey
  last_name: Bakhirkin
- first_name: Thomas
  full_name: Ferrere, Thomas
  id: 40960E6E-F248-11E8-B48F-1D18A9856A87
  last_name: Ferrere
  orcid: 0000-0001-5199-3143
- first_name: Dejan
  full_name: Nickovic, Dejan
  last_name: Nickovic
- first_name: Oded
  full_name: Maler, Oded
  last_name: Maler
- first_name: Eugene
  full_name: Asarin, Eugene
  last_name: Asarin
citation:
  ama: 'Bakhirkin A, Ferrere T, Nickovic D, Maler O, Asarin E. Online timed pattern
    matching using automata. In: Vol 11022. Springer; 2018:215-232. doi:<a href="https://doi.org/10.1007/978-3-030-00151-3_13">10.1007/978-3-030-00151-3_13</a>'
  apa: 'Bakhirkin, A., Ferrere, T., Nickovic, D., Maler, O., &#38; Asarin, E. (2018).
    Online timed pattern matching using automata (Vol. 11022, pp. 215–232). Presented
    at the FORMATS: Formal Modeling and Analysis of Timed Systems, Bejing, China:
    Springer. <a href="https://doi.org/10.1007/978-3-030-00151-3_13">https://doi.org/10.1007/978-3-030-00151-3_13</a>'
  chicago: Bakhirkin, Alexey, Thomas Ferrere, Dejan Nickovic, Oded Maler, and Eugene
    Asarin. “Online Timed Pattern Matching Using Automata,” 11022:215–32. Springer,
    2018. <a href="https://doi.org/10.1007/978-3-030-00151-3_13">https://doi.org/10.1007/978-3-030-00151-3_13</a>.
  ieee: 'A. Bakhirkin, T. Ferrere, D. Nickovic, O. Maler, and E. Asarin, “Online timed
    pattern matching using automata,” presented at the FORMATS: Formal Modeling and
    Analysis of Timed Systems, Bejing, China, 2018, vol. 11022, pp. 215–232.'
  ista: 'Bakhirkin A, Ferrere T, Nickovic D, Maler O, Asarin E. 2018. Online timed
    pattern matching using automata. FORMATS: Formal Modeling and Analysis of Timed
    Systems, LNCS, vol. 11022, 215–232.'
  mla: Bakhirkin, Alexey, et al. <i>Online Timed Pattern Matching Using Automata</i>.
    Vol. 11022, Springer, 2018, pp. 215–32, doi:<a href="https://doi.org/10.1007/978-3-030-00151-3_13">10.1007/978-3-030-00151-3_13</a>.
  short: A. Bakhirkin, T. Ferrere, D. Nickovic, O. Maler, E. Asarin, in:, Springer,
    2018, pp. 215–232.
conference:
  end_date: 2018-09-06
  location: Bejing, China
  name: 'FORMATS: Formal Modeling and Analysis of Timed Systems'
  start_date: 2018-09-04
date_created: 2018-12-11T11:44:31Z
date_published: 2018-08-26T00:00:00Z
date_updated: 2025-04-15T06:26:03Z
day: '26'
ddc:
- '000'
department:
- _id: ToHe
doi: 10.1007/978-3-030-00151-3_13
external_id:
  isi:
  - '000884993200013'
file:
- access_level: open_access
  checksum: 436b7574934324cfa7d1d3986fddc65b
  content_type: application/pdf
  creator: dernst
  date_created: 2020-05-14T11:34:34Z
  date_updated: 2020-07-14T12:48:03Z
  file_id: '7831'
  file_name: 2018_LNCS_Bakhirkin.pdf
  file_size: 374851
  relation: main_file
file_date_updated: 2020-07-14T12:48:03Z
has_accepted_license: '1'
intvolume: '     11022'
isi: 1
language:
- iso: eng
month: '08'
oa: 1
oa_version: Submitted Version
page: 215 - 232
project:
- _id: 25832EC2-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S 11407_N23
  name: Rigorous Systems Engineering
- _id: 25F42A32-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: Z211
  name: Formal methods for the design and analysis of complex systems
publication_identifier:
  isbn:
  - 978-3-030-00150-6
publication_status: published
publisher: Springer
publist_id: '7976'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Online timed pattern matching using automata
type: conference
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 11022
year: '2018'
...
---
_id: '692'
abstract:
- lang: eng
  text: We consider families of confocal conics and two pencils of Apollonian circles
    having the same foci. We will show that these families of curves generate trivial
    3-webs and find the exact formulas describing them.
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Arseniy
  full_name: Akopyan, Arseniy
  id: 430D2C90-F248-11E8-B48F-1D18A9856A87
  last_name: Akopyan
  orcid: 0000-0002-2548-617X
citation:
  ama: Akopyan A. 3-Webs generated by confocal conics and circles. <i>Geometriae Dedicata</i>.
    2018;194(1):55-64. doi:<a href="https://doi.org/10.1007/s10711-017-0265-6">10.1007/s10711-017-0265-6</a>
  apa: Akopyan, A. (2018). 3-Webs generated by confocal conics and circles. <i>Geometriae
    Dedicata</i>. Springer. <a href="https://doi.org/10.1007/s10711-017-0265-6">https://doi.org/10.1007/s10711-017-0265-6</a>
  chicago: Akopyan, Arseniy. “3-Webs Generated by Confocal Conics and Circles.” <i>Geometriae
    Dedicata</i>. Springer, 2018. <a href="https://doi.org/10.1007/s10711-017-0265-6">https://doi.org/10.1007/s10711-017-0265-6</a>.
  ieee: A. Akopyan, “3-Webs generated by confocal conics and circles,” <i>Geometriae
    Dedicata</i>, vol. 194, no. 1. Springer, pp. 55–64, 2018.
  ista: Akopyan A. 2018. 3-Webs generated by confocal conics and circles. Geometriae
    Dedicata. 194(1), 55–64.
  mla: Akopyan, Arseniy. “3-Webs Generated by Confocal Conics and Circles.” <i>Geometriae
    Dedicata</i>, vol. 194, no. 1, Springer, 2018, pp. 55–64, doi:<a href="https://doi.org/10.1007/s10711-017-0265-6">10.1007/s10711-017-0265-6</a>.
  short: A. Akopyan, Geometriae Dedicata 194 (2018) 55–64.
corr_author: '1'
date_created: 2018-12-11T11:47:57Z
date_published: 2018-06-01T00:00:00Z
date_updated: 2025-04-15T06:50:29Z
day: '01'
ddc:
- '510'
department:
- _id: HeEd
doi: 10.1007/s10711-017-0265-6
ec_funded: 1
external_id:
  isi:
  - '000431418800004'
file:
- access_level: open_access
  checksum: 1febcfc1266486053a069e3425ea3713
  content_type: application/pdf
  creator: kschuh
  date_created: 2020-01-03T11:35:08Z
  date_updated: 2020-07-14T12:47:44Z
  file_id: '7222'
  file_name: 2018_Springer_Akopyan.pdf
  file_size: 1140860
  relation: main_file
file_date_updated: 2020-07-14T12:47:44Z
has_accepted_license: '1'
intvolume: '       194'
isi: 1
issue: '1'
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
page: 55 - 64
project:
- _id: 25681D80-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '291734'
  name: International IST Postdoc Fellowship Programme
publication: Geometriae Dedicata
publication_status: published
publisher: Springer
publist_id: '7014'
quality_controlled: '1'
scopus_import: '1'
status: public
title: 3-Webs generated by confocal conics and circles
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 194
year: '2018'
...
---
_id: '11572'
abstract:
- lang: eng
  text: We present spectroscopic follow-up of candidate luminous Ly α emitters (LAEs)
    at z = 5.7–6.6 in the SA22 field with VLT/X-SHOOTER. We confirm two new luminous
    LAEs at z = 5.676 (SR6) and z = 6.532 (VR7), and also present HST follow-up of
    both sources. These sources have luminosities LLy α ≈ 3 × 1043 erg s−1, very high
    rest-frame equivalent widths of EW0 ≳ 200 Å and narrow Ly α lines (200–340 km s−1).
    VR7 is the most UV-luminous LAE at z > 6.5, with M1500 = −22.5, even brighter
    in the UV than CR7. Besides Ly α, we do not detect any other rest-frame UV lines
    in the spectra of SR6 and VR7, and argue that rest-frame UV lines are easier to
    observe in bright galaxies with low Ly α equivalent widths. We confirm that Ly α
    line widths increase with Ly α luminosity at z = 5.7, while there are indications
    that Ly α lines of faint LAEs become broader at z = 6.6, potentially due to reionization.
    We find a large spread of up to 3 dex in UV luminosity for >L⋆ LAEs, but find
    that the Ly α luminosity of the brightest LAEs is strongly related to UV luminosity
    at z = 6.6. Under basic assumptions, we find that several LAEs at z ≈ 6–7 have
    Ly α escape fractions ≳ 100  per cent, indicating bursty star formation histories,
    alternative Ly α production mechanisms, or dust attenuating Ly α emission differently
    than UV emission. Finally, we present a method to compute ξion, the production
    efficiency of ionizing photons, and find that LAEs at z ≈ 6–7 have high values
    of log10(ξion/Hz erg−1) ≈ 25.51 ± 0.09 that may alleviate the need for high Lyman-Continuum
    escape fractions required for reionization.
acknowledgement: 'We thank the referee for a constructive report that has improved
  the quality and clarity of this work. The authors thank Grecco Oyarzún for discussions.
  JM acknowledges the support of a Huygens PhD fellowship from Leiden University.
  DS acknowledges financial support from the Netherlands Organisation for Scientific
  research (NWO) through a Veni fellowship and from Lancaster University through an
  Early Career Internal Grant A100679. BD acknowledges financial support from NASA
  through the Astrophysics Data Analysis Program (ADAP), grant number NNX12AE20G.
  We thank Kasper Schmidt for providing measurements. Based on observations with the
  W.M. Keck Observatory through programme C267D. The W.M. Keck Observatory is operated
  as a scientific partnership amongst the California Institute of Technology, the
  University of California and the National Aeronautics and Space Administration.
  Based on observations made with ESO Telescopes at the La Silla Paranal Observatory
  under programme IDs 097.A-0943, 294.A 5018 and 098.A-0819 and on data products produced
  by TERAPIX and the Cambridge Astronomy Survey Unit on behalf of the UltraVISTA consortium.
  The authors acknowledge the award of observing time (W16AN004) and of service time
  (SW2014b20) on the William Herschel Telescope (WHT). WHT and its service programme
  are operated on the island of La Palma by the Isaac Newton Group in the Spanish
  Observatorio del Roque de los Muchachos of the Instituto de Astrofisica de Canarias.
  Based on observations made with the NASA/ESA HST, obtained (from the Data Archive)
  at the Space Telescope Science Institute, which is operated by the Association of
  Universities for Research in Astronomy, Inc., under NASA contract NAS 5-26555. These
  observations are associated with programme #14699. We are grateful for the excellent
  data sets from the COSMOS, UltraVISTA, SXDS, UDS and CFHTLS survey teams; without
  these legacy surveys, this research would have been impossible. We have benefited
  from the public available programming language PYTHON, including the NUMPY, MATPLOTLIB,
  PYFITS, SCIPY and ASTROPY packages, the astronomical imaging tools SEXTRACTOR, SWARP
  and SCAMP and the TOPCAT analysis tool (Taylor 2013).'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Jorryt J
  full_name: Matthee, Jorryt J
  id: 7439a258-f3c0-11ec-9501-9df22fe06720
  last_name: Matthee
  orcid: 0000-0003-2871-127X
- first_name: David
  full_name: Sobral, David
  last_name: Sobral
- first_name: Behnam
  full_name: Darvish, Behnam
  last_name: Darvish
- first_name: Sérgio
  full_name: Santos, Sérgio
  last_name: Santos
- first_name: Bahram
  full_name: Mobasher, Bahram
  last_name: Mobasher
- first_name: Ana
  full_name: Paulino-Afonso, Ana
  last_name: Paulino-Afonso
- first_name: Huub
  full_name: Röttgering, Huub
  last_name: Röttgering
- first_name: Lara
  full_name: Alegre, Lara
  last_name: Alegre
citation:
  ama: Matthee JJ, Sobral D, Darvish B, et al. Spectroscopic properties of luminous
    Ly α emitters at z ≈ 6–7 and comparison to the Lyman-break population. <i>Monthly
    Notices of the Royal Astronomical Society</i>. 2017;472(1):772-787. doi:<a href="https://doi.org/10.1093/mnras/stx2061">10.1093/mnras/stx2061</a>
  apa: Matthee, J. J., Sobral, D., Darvish, B., Santos, S., Mobasher, B., Paulino-Afonso,
    A., … Alegre, L. (2017). Spectroscopic properties of luminous Ly α emitters at
    z ≈ 6–7 and comparison to the Lyman-break population. <i>Monthly Notices of the
    Royal Astronomical Society</i>. Oxford University Press. <a href="https://doi.org/10.1093/mnras/stx2061">https://doi.org/10.1093/mnras/stx2061</a>
  chicago: Matthee, Jorryt J, David Sobral, Behnam Darvish, Sérgio Santos, Bahram
    Mobasher, Ana Paulino-Afonso, Huub Röttgering, and Lara Alegre. “Spectroscopic
    Properties of Luminous Ly α Emitters at z ≈ 6–7 and Comparison to the Lyman-Break
    Population.” <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford
    University Press, 2017. <a href="https://doi.org/10.1093/mnras/stx2061">https://doi.org/10.1093/mnras/stx2061</a>.
  ieee: J. J. Matthee <i>et al.</i>, “Spectroscopic properties of luminous Ly α emitters
    at z ≈ 6–7 and comparison to the Lyman-break population,” <i>Monthly Notices of
    the Royal Astronomical Society</i>, vol. 472, no. 1. Oxford University Press,
    pp. 772–787, 2017.
  ista: Matthee JJ, Sobral D, Darvish B, Santos S, Mobasher B, Paulino-Afonso A, Röttgering
    H, Alegre L. 2017. Spectroscopic properties of luminous Ly α emitters at z ≈ 6–7
    and comparison to the Lyman-break population. Monthly Notices of the Royal Astronomical
    Society. 472(1), 772–787.
  mla: Matthee, Jorryt J., et al. “Spectroscopic Properties of Luminous Ly α Emitters
    at z ≈ 6–7 and Comparison to the Lyman-Break Population.” <i>Monthly Notices of
    the Royal Astronomical Society</i>, vol. 472, no. 1, Oxford University Press,
    2017, pp. 772–87, doi:<a href="https://doi.org/10.1093/mnras/stx2061">10.1093/mnras/stx2061</a>.
  short: J.J. Matthee, D. Sobral, B. Darvish, S. Santos, B. Mobasher, A. Paulino-Afonso,
    H. Röttgering, L. Alegre, Monthly Notices of the Royal Astronomical Society 472
    (2017) 772–787.
date_created: 2022-07-13T09:47:39Z
date_published: 2017-11-01T00:00:00Z
date_updated: 2024-10-14T11:36:26Z
day: '01'
doi: 10.1093/mnras/stx2061
extern: '1'
external_id:
  arxiv:
  - '1706.06591'
intvolume: '       472'
issue: '1'
keyword:
- Space and Planetary Science
- Astronomy and Astrophysics
- 'galaxies: evolution – galaxies: high-redshift'
- dark ages
- reionization
- first stars
- 'cosmology: observations'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1706.06591
month: '11'
oa: 1
oa_version: Preprint
page: 772-787
publication: Monthly Notices of the Royal Astronomical Society
publication_identifier:
  eissn:
  - 1365-2966
  issn:
  - 0035-8711
publication_status: published
publisher: Oxford University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Spectroscopic properties of luminous Ly α emitters at z ≈ 6–7 and comparison
  to the Lyman-break population
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 472
year: '2017'
...
---
_id: '1168'
abstract:
- lang: eng
  text: Optimum experimental design theory has recently been extended for parameter
    estimation in copula models. The use of these models allows one to gain in flexibility
    by considering the model parameter set split into marginal and dependence parameters.
    However, this separation also leads to the natural issue of estimating only a
    subset of all model parameters. In this work, we treat this problem with the application
    of the (Formula presented.)-optimality to copula models. First, we provide an
    extension of the corresponding equivalence theory. Then, we analyze a wide range
    of flexible copula models to highlight the usefulness of (Formula presented.)-optimality
    in many possible scenarios. Finally, we discuss how the usage of the introduced
    design criterion also relates to the more general issue of copula selection and
    optimal design for model discrimination.
acknowledgement: 'This work has been supported by the project ANR-2011-IS01-001-01
  “DESIRE” and Austrian Science Fund (FWF) I833-N18. Open access funding is provided
  by the Austrian Science Fund (FWF). '
article_processing_charge: No
author:
- first_name: Elisa
  full_name: Perrone, Elisa
  id: 2A5F8724-F248-11E8-B48F-1D18A9856A87
  last_name: Perrone
  orcid: 0000-0003-0370-9835
- first_name: Andreas
  full_name: Rappold, Andreas
  last_name: Rappold
- first_name: Werner
  full_name: Müller, Werner
  last_name: Müller
citation:
  ama: Perrone E, Rappold A, Müller W. D inf s optimality in copula models. <i>Statistical
    Methods and Applications</i>. 2017;26(3):403-418. doi:<a href="https://doi.org/10.1007/s10260-016-0375-6">10.1007/s10260-016-0375-6</a>
  apa: Perrone, E., Rappold, A., &#38; Müller, W. (2017). D inf s optimality in copula
    models. <i>Statistical Methods and Applications</i>. Springer. <a href="https://doi.org/10.1007/s10260-016-0375-6">https://doi.org/10.1007/s10260-016-0375-6</a>
  chicago: Perrone, Elisa, Andreas Rappold, and Werner Müller. “D Inf s Optimality
    in Copula Models.” <i>Statistical Methods and Applications</i>. Springer, 2017.
    <a href="https://doi.org/10.1007/s10260-016-0375-6">https://doi.org/10.1007/s10260-016-0375-6</a>.
  ieee: E. Perrone, A. Rappold, and W. Müller, “D inf s optimality in copula models,”
    <i>Statistical Methods and Applications</i>, vol. 26, no. 3. Springer, pp. 403–418,
    2017.
  ista: Perrone E, Rappold A, Müller W. 2017. D inf s optimality in copula models.
    Statistical Methods and Applications. 26(3), 403–418.
  mla: Perrone, Elisa, et al. “D Inf s Optimality in Copula Models.” <i>Statistical
    Methods and Applications</i>, vol. 26, no. 3, Springer, 2017, pp. 403–18, doi:<a
    href="https://doi.org/10.1007/s10260-016-0375-6">10.1007/s10260-016-0375-6</a>.
  short: E. Perrone, A. Rappold, W. Müller, Statistical Methods and Applications 26
    (2017) 403–418.
corr_author: '1'
date_created: 2018-12-11T11:50:31Z
date_published: 2017-08-01T00:00:00Z
date_updated: 2024-10-09T20:57:17Z
day: '01'
ddc:
- '519'
department:
- _id: CaUh
doi: 10.1007/s10260-016-0375-6
external_id:
  isi:
  - '000407973200004'
file:
- access_level: open_access
  checksum: 0b2d1b647ca96e9ef13a14b8b6775e0f
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:16:13Z
  date_updated: 2020-07-14T12:44:37Z
  file_id: '5199'
  file_name: IST-2017-739-v1+2_10260_2016_375_MOESM1_ESM.pdf
  file_size: 56664
  relation: main_file
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  checksum: 3321ef34e02e28acfc427f77cf32812a
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:16:14Z
  date_updated: 2020-07-14T12:44:37Z
  file_id: '5200'
  file_name: IST-2017-739-v1+3_s10260-016-0375-6.pdf
  file_size: 688953
  relation: main_file
file_date_updated: 2020-07-14T12:44:37Z
has_accepted_license: '1'
intvolume: '        26'
isi: 1
issue: '3'
language:
- iso: eng
month: '08'
oa: 1
oa_version: Submitted Version
page: 403 - 418
publication: Statistical Methods and Applications
publication_status: published
publisher: Springer
publist_id: '6189'
pubrep_id: '739'
quality_controlled: '1'
scopus_import: '1'
status: public
title: D inf s optimality in copula models
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 26
year: '2017'
...
---
_id: '1207'
abstract:
- lang: eng
  text: The eigenvalue distribution of the sum of two large Hermitian matrices, when
    one of them is conjugated by a Haar distributed unitary matrix, is asymptotically
    given by the free convolution of their spectral distributions. We prove that this
    convergence also holds locally in the bulk of the spectrum, down to the optimal
    scales larger than the eigenvalue spacing. The corresponding eigenvectors are
    fully delocalized. Similar results hold for the sum of two real symmetric matrices,
    when one is conjugated by Haar orthogonal matrix.
article_processing_charge: Yes (via OA deal)
author:
- first_name: Zhigang
  full_name: Bao, Zhigang
  id: 442E6A6C-F248-11E8-B48F-1D18A9856A87
  last_name: Bao
  orcid: 0000-0003-3036-1475
- first_name: László
  full_name: Erdös, László
  id: 4DBD5372-F248-11E8-B48F-1D18A9856A87
  last_name: Erdös
  orcid: 0000-0001-5366-9603
- first_name: Kevin
  full_name: Schnelli, Kevin
  id: 434AD0AE-F248-11E8-B48F-1D18A9856A87
  last_name: Schnelli
  orcid: 0000-0003-0954-3231
citation:
  ama: Bao Z, Erdös L, Schnelli K. Local law of addition of random matrices on optimal
    scale. <i>Communications in Mathematical Physics</i>. 2017;349(3):947-990. doi:<a
    href="https://doi.org/10.1007/s00220-016-2805-6">10.1007/s00220-016-2805-6</a>
  apa: Bao, Z., Erdös, L., &#38; Schnelli, K. (2017). Local law of addition of random
    matrices on optimal scale. <i>Communications in Mathematical Physics</i>. Springer.
    <a href="https://doi.org/10.1007/s00220-016-2805-6">https://doi.org/10.1007/s00220-016-2805-6</a>
  chicago: Bao, Zhigang, László Erdös, and Kevin Schnelli. “Local Law of Addition
    of Random Matrices on Optimal Scale.” <i>Communications in Mathematical Physics</i>.
    Springer, 2017. <a href="https://doi.org/10.1007/s00220-016-2805-6">https://doi.org/10.1007/s00220-016-2805-6</a>.
  ieee: Z. Bao, L. Erdös, and K. Schnelli, “Local law of addition of random matrices
    on optimal scale,” <i>Communications in Mathematical Physics</i>, vol. 349, no.
    3. Springer, pp. 947–990, 2017.
  ista: Bao Z, Erdös L, Schnelli K. 2017. Local law of addition of random matrices
    on optimal scale. Communications in Mathematical Physics. 349(3), 947–990.
  mla: Bao, Zhigang, et al. “Local Law of Addition of Random Matrices on Optimal Scale.”
    <i>Communications in Mathematical Physics</i>, vol. 349, no. 3, Springer, 2017,
    pp. 947–90, doi:<a href="https://doi.org/10.1007/s00220-016-2805-6">10.1007/s00220-016-2805-6</a>.
  short: Z. Bao, L. Erdös, K. Schnelli, Communications in Mathematical Physics 349
    (2017) 947–990.
date_created: 2018-12-11T11:50:43Z
date_published: 2017-02-01T00:00:00Z
date_updated: 2025-07-10T11:50:22Z
day: '01'
ddc:
- '530'
department:
- _id: LaEr
doi: 10.1007/s00220-016-2805-6
ec_funded: 1
external_id:
  isi:
  - '000393696700005'
file:
- access_level: open_access
  checksum: ddff79154c3daf27237de5383b1264a9
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:14:47Z
  date_updated: 2020-07-14T12:44:39Z
  file_id: '5102'
  file_name: IST-2016-722-v1+1_s00220-016-2805-6.pdf
  file_size: 1033743
  relation: main_file
file_date_updated: 2020-07-14T12:44:39Z
has_accepted_license: '1'
intvolume: '       349'
isi: 1
issue: '3'
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
page: 947 - 990
project:
- _id: 258DCDE6-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '338804'
  name: Random matrices, universality and disordered quantum systems
publication: Communications in Mathematical Physics
publication_identifier:
  issn:
  - 0010-3616
publication_status: published
publisher: Springer
publist_id: '6141'
pubrep_id: '722'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Local law of addition of random matrices on optimal scale
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 349
year: '2017'
...
---
OA_place: repository
OA_type: green
_id: '21615'
abstract:
- lang: eng
  text: Focused electron beams can induce electromagnetic radiation from periodic
    surfaces. We have used low-energy electrons (1.5-6kV) to induce visible light
    emission from nanoscale gratings (50nm and 60nm). Our results coincide well with
    numerical simulations.
article_number: FM3H.6
article_processing_charge: No
arxiv: 1
author:
- first_name: Aviram
  full_name: Massuda, Aviram
  last_name: Massuda
- first_name: Charles
  full_name: Roques-Carmes, Charles
  id: e2e68fc9-6505-11ef-a541-eb4e72cc3e82
  last_name: Roques-Carmes
- first_name: Yujia
  full_name: Yang, Yujia
  last_name: Yang
- first_name: Steven E.
  full_name: Kooi, Steven E.
  last_name: Kooi
- first_name: Yi
  full_name: Yang, Yi
  last_name: Yang
- first_name: Chitraang
  full_name: Murdia, Chitraang
  last_name: Murdia
- first_name: Karl K.
  full_name: Berggren, Karl K.
  last_name: Berggren
- first_name: Ido
  full_name: Kaminer, Ido
  last_name: Kaminer
- first_name: Marin
  full_name: Soljačić, Marin
  last_name: Soljačić
citation:
  ama: 'Massuda A, Roques-Carmes C, Yang Y, et al. Smith-Purcell radiation from low-energy
    electrons. In: <i>Conference on Lasers and Electro-Optics</i>. Optica Publishing
    Group; 2017. doi:<a href="https://doi.org/10.1364/cleo_qels.2017.fm3h.6">10.1364/cleo_qels.2017.fm3h.6</a>'
  apa: 'Massuda, A., Roques-Carmes, C., Yang, Y., Kooi, S. E., Yang, Y., Murdia, C.,
    … Soljačić, M. (2017). Smith-Purcell radiation from low-energy electrons. In <i>Conference
    on Lasers and Electro-Optics</i>. San Jose, CA, United States: Optica Publishing
    Group. <a href="https://doi.org/10.1364/cleo_qels.2017.fm3h.6">https://doi.org/10.1364/cleo_qels.2017.fm3h.6</a>'
  chicago: Massuda, Aviram, Charles Roques-Carmes, Yujia Yang, Steven E. Kooi, Yi
    Yang, Chitraang Murdia, Karl K. Berggren, Ido Kaminer, and Marin Soljačić. “Smith-Purcell
    Radiation from Low-Energy Electrons.” In <i>Conference on Lasers and Electro-Optics</i>.
    Optica Publishing Group, 2017. <a href="https://doi.org/10.1364/cleo_qels.2017.fm3h.6">https://doi.org/10.1364/cleo_qels.2017.fm3h.6</a>.
  ieee: A. Massuda <i>et al.</i>, “Smith-Purcell radiation from low-energy electrons,”
    in <i>Conference on Lasers and Electro-Optics</i>, San Jose, CA, United States,
    2017.
  ista: 'Massuda A, Roques-Carmes C, Yang Y, Kooi SE, Yang Y, Murdia C, Berggren KK,
    Kaminer I, Soljačić M. 2017. Smith-Purcell radiation from low-energy electrons.
    Conference on Lasers and Electro-Optics. CLEO: Fundamental Science, FM3H.6.'
  mla: Massuda, Aviram, et al. “Smith-Purcell Radiation from Low-Energy Electrons.”
    <i>Conference on Lasers and Electro-Optics</i>, FM3H.6, Optica Publishing Group,
    2017, doi:<a href="https://doi.org/10.1364/cleo_qels.2017.fm3h.6">10.1364/cleo_qels.2017.fm3h.6</a>.
  short: A. Massuda, C. Roques-Carmes, Y. Yang, S.E. Kooi, Y. Yang, C. Murdia, K.K.
    Berggren, I. Kaminer, M. Soljačić, in:, Conference on Lasers and Electro-Optics,
    Optica Publishing Group, 2017.
conference:
  end_date: 2017-05-19
  location: San Jose, CA, United States
  name: 'CLEO: Fundamental Science'
  start_date: 2017-05-14
date_created: 2026-03-30T12:22:48Z
date_published: 2017-05-01T00:00:00Z
date_updated: 2026-05-05T06:46:39Z
day: '01'
doi: 10.1364/cleo_qels.2017.fm3h.6
extern: '1'
external_id:
  arxiv:
  - '1710.05358'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.1710.05358
month: '05'
oa: 1
oa_version: Preprint
publication: Conference on Lasers and Electro-Optics
publication_identifier:
  eisbn:
  - '9781943580279'
publication_status: published
publisher: Optica Publishing Group
quality_controlled: '1'
scopus_import: '1'
status: public
title: Smith-Purcell radiation from low-energy electrons
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2017'
...
---
_id: '14007'
abstract:
- lang: eng
  text: 'In a recent article by Hockett et al (2016 J. Phys. B: At. Mol. Opt. Phys.
    49 095602), time delays arising in the context of molecular single-photon ionization
    are investigated from a theoretical point of view. We argue that one of the central
    equations given in this article is incorrect and present a reformulation that
    is consistent with the established treatment of angle-dependent scattering delays
    (Eisenbud 1948 PhD Thesis Princeton University; Wigner 1955 Phys. Rev. 98 145–7;
    Smith 1960 Phys. Rev. 118 349–6; Nussenzveig 1972 Phys. Rev. D 6 1534–42).'
article_number: '078002'
article_processing_charge: No
article_type: letter_note
arxiv: 1
author:
- first_name: Denitsa Rangelova
  full_name: Baykusheva, Denitsa Rangelova
  id: 71b4d059-2a03-11ee-914d-dfa3beed6530
  last_name: Baykusheva
- first_name: Hans Jakob
  full_name: Wörner, Hans Jakob
  last_name: Wörner
citation:
  ama: 'Baykusheva DR, Wörner HJ. Comment on ‘Time delays in molecular photoionization.’
    <i>Journal of Physics B: Atomic, Molecular and Optical Physics</i>. 2017;50(7).
    doi:<a href="https://doi.org/10.1088/1361-6455/aa62b5">10.1088/1361-6455/aa62b5</a>'
  apa: 'Baykusheva, D. R., &#38; Wörner, H. J. (2017). Comment on ‘Time delays in
    molecular photoionization.’ <i>Journal of Physics B: Atomic, Molecular and Optical
    Physics</i>. IOP Publishing. <a href="https://doi.org/10.1088/1361-6455/aa62b5">https://doi.org/10.1088/1361-6455/aa62b5</a>'
  chicago: 'Baykusheva, Denitsa Rangelova, and Hans Jakob Wörner. “Comment on ‘Time
    Delays in Molecular Photoionization.’” <i>Journal of Physics B: Atomic, Molecular
    and Optical Physics</i>. IOP Publishing, 2017. <a href="https://doi.org/10.1088/1361-6455/aa62b5">https://doi.org/10.1088/1361-6455/aa62b5</a>.'
  ieee: 'D. R. Baykusheva and H. J. Wörner, “Comment on ‘Time delays in molecular
    photoionization,’” <i>Journal of Physics B: Atomic, Molecular and Optical Physics</i>,
    vol. 50, no. 7. IOP Publishing, 2017.'
  ista: 'Baykusheva DR, Wörner HJ. 2017. Comment on ‘Time delays in molecular photoionization’.
    Journal of Physics B: Atomic, Molecular and Optical Physics. 50(7), 078002.'
  mla: 'Baykusheva, Denitsa Rangelova, and Hans Jakob Wörner. “Comment on ‘Time Delays
    in Molecular Photoionization.’” <i>Journal of Physics B: Atomic, Molecular and
    Optical Physics</i>, vol. 50, no. 7, 078002, IOP Publishing, 2017, doi:<a href="https://doi.org/10.1088/1361-6455/aa62b5">10.1088/1361-6455/aa62b5</a>.'
  short: 'D.R. Baykusheva, H.J. Wörner, Journal of Physics B: Atomic, Molecular and
    Optical Physics 50 (2017).'
date_created: 2023-08-10T06:36:29Z
date_published: 2017-03-15T00:00:00Z
date_updated: 2023-08-22T08:32:43Z
day: '15'
doi: 10.1088/1361-6455/aa62b5
extern: '1'
external_id:
  arxiv:
  - '1611.09352'
intvolume: '        50'
issue: '7'
keyword:
- Condensed Matter Physics
- Atomic and Molecular Physics
- and Optics
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1611.09352
month: '03'
oa: 1
oa_version: Preprint
publication: 'Journal of Physics B: Atomic, Molecular and Optical Physics'
publication_identifier:
  eissn:
  - 1361-6455
  issn:
  - 0953-4075
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: Comment on ‘Time delays in molecular photoionization’
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 50
year: '2017'
...
---
_id: '14009'
abstract:
- lang: eng
  text: Attosecond delays between photoelectron wave packets emitted from different
    electronic shells are now well established. Is there any delay between electrons
    originating from the same electronic shell but leaving the cation in different
    fine-structure states? This question is relevant for all attosecond photoemission
    studies involving heavy elements, be it atoms, molecules or solids. We answer
    this fundamental question by measuring energy-dependent delays between photoelectron
    wave packets associated with the 2P3/2 and 2P1/2 components of the electronic
    groundstates of Xe+ and Kr+. We observe delays reaching up to 33±6 as in the case
    of Xe. Our results are compared with two state-of-the-art theories. Whereas both
    theories quantitatively agree with the results obtained for Kr, neither of them
    fully reproduces the experimental results in Xe. Performing delay measurements
    very close to the ionization thresholds, we compare the agreement of several analytical
    formulas for the continuum-continuum delays with experimental data. Our results
    show an important influence of spin-orbit coupling on attosecond photoionization
    delays, highlight the requirement for additional theory development, and offer
    a precision benchmark for such work.
article_number: '013404'
article_processing_charge: No
article_type: original
author:
- first_name: I.
  full_name: Jordan, I.
  last_name: Jordan
- first_name: M.
  full_name: Huppert, M.
  last_name: Huppert
- first_name: S.
  full_name: Pabst, S.
  last_name: Pabst
- first_name: A. S.
  full_name: Kheifets, A. S.
  last_name: Kheifets
- first_name: Denitsa Rangelova
  full_name: Baykusheva, Denitsa Rangelova
  id: 71b4d059-2a03-11ee-914d-dfa3beed6530
  last_name: Baykusheva
- first_name: H. J.
  full_name: Wörner, H. J.
  last_name: Wörner
citation:
  ama: Jordan I, Huppert M, Pabst S, Kheifets AS, Baykusheva DR, Wörner HJ. Spin-orbit
    delays in photoemission. <i>Physical Review A</i>. 2017;95(1). doi:<a href="https://doi.org/10.1103/physreva.95.013404">10.1103/physreva.95.013404</a>
  apa: Jordan, I., Huppert, M., Pabst, S., Kheifets, A. S., Baykusheva, D. R., &#38;
    Wörner, H. J. (2017). Spin-orbit delays in photoemission. <i>Physical Review A</i>.
    American Physical Society. <a href="https://doi.org/10.1103/physreva.95.013404">https://doi.org/10.1103/physreva.95.013404</a>
  chicago: Jordan, I., M. Huppert, S. Pabst, A. S. Kheifets, Denitsa Rangelova Baykusheva,
    and H. J. Wörner. “Spin-Orbit Delays in Photoemission.” <i>Physical Review A</i>.
    American Physical Society, 2017. <a href="https://doi.org/10.1103/physreva.95.013404">https://doi.org/10.1103/physreva.95.013404</a>.
  ieee: I. Jordan, M. Huppert, S. Pabst, A. S. Kheifets, D. R. Baykusheva, and H.
    J. Wörner, “Spin-orbit delays in photoemission,” <i>Physical Review A</i>, vol.
    95, no. 1. American Physical Society, 2017.
  ista: Jordan I, Huppert M, Pabst S, Kheifets AS, Baykusheva DR, Wörner HJ. 2017.
    Spin-orbit delays in photoemission. Physical Review A. 95(1), 013404.
  mla: Jordan, I., et al. “Spin-Orbit Delays in Photoemission.” <i>Physical Review
    A</i>, vol. 95, no. 1, 013404, American Physical Society, 2017, doi:<a href="https://doi.org/10.1103/physreva.95.013404">10.1103/physreva.95.013404</a>.
  short: I. Jordan, M. Huppert, S. Pabst, A.S. Kheifets, D.R. Baykusheva, H.J. Wörner,
    Physical Review A 95 (2017).
date_created: 2023-08-10T06:36:58Z
date_published: 2017-01-10T00:00:00Z
date_updated: 2023-08-22T08:38:17Z
day: '10'
doi: 10.1103/physreva.95.013404
extern: '1'
intvolume: '        95'
issue: '1'
language:
- iso: eng
month: '01'
oa_version: None
publication: Physical Review A
publication_identifier:
  eissn:
  - 2469-9934
  issn:
  - 2469-9926
publication_status: published
publisher: American Physical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Spin-orbit delays in photoemission
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 95
year: '2017'
...
---
_id: '487'
abstract:
- lang: eng
  text: In this paper we study network architecture for unlicensed cellular networking
    for outdoor coverage in TV white spaces. The main technology proposed for TV white
    spaces is 802.11af, a Wi-Fi variant adapted for TV frequencies. However, 802.11af
    is originally designed for improved indoor propagation. We show that long links,
    typical for outdoor use, exacerbate known Wi-Fi issues, such as hidden and exposed
    terminal, and significantly reduce its efficiency. Instead, we propose CellFi,
    an alternative architecture based on LTE. LTE is designed for long-range coverage
    and throughput efficiency, but it is also designed to operate in tightly controlled
    and centrally managed networks. CellFi overcomes these problems by designing an
    LTE-compatible spectrum database component, mandatory for TV white space networking,
    and introducing an interference management component for distributed coordination.
    CellFi interference management is compatible with existing LTE mechanisms, requires
    no explicit communication between base stations, and is more efficient than CSMA
    for long links. We evaluate our design through extensive real world evaluation
    on of-the-shelf LTE equipment and simulations. We show that, compared to 802.11af,
    it increases coverage by 40% and reduces median flow completion times by 2.3x.
article_processing_charge: No
author:
- first_name: Ghufran
  full_name: Baig, Ghufran
  last_name: Baig
- first_name: Bozidar
  full_name: Radunovic, Bozidar
  last_name: Radunovic
- first_name: Dan-Adrian
  full_name: Alistarh, Dan-Adrian
  id: 4A899BFC-F248-11E8-B48F-1D18A9856A87
  last_name: Alistarh
  orcid: 0000-0003-3650-940X
- first_name: Matthew
  full_name: Balkwill, Matthew
  last_name: Balkwill
- first_name: Thomas
  full_name: Karagiannis, Thomas
  last_name: Karagiannis
- first_name: Lili
  full_name: Qiu, Lili
  last_name: Qiu
citation:
  ama: 'Baig G, Radunovic B, Alistarh D-A, Balkwill M, Karagiannis T, Qiu L. Towards
    unlicensed cellular networks in TV white spaces. In: <i>Proceedings of the 2017
    13th International Conference on Emerging Networking EXperiments and Technologies</i>.
    ACM; 2017:2-14. doi:<a href="https://doi.org/10.1145/3143361.3143367">10.1145/3143361.3143367</a>'
  apa: 'Baig, G., Radunovic, B., Alistarh, D.-A., Balkwill, M., Karagiannis, T., &#38;
    Qiu, L. (2017). Towards unlicensed cellular networks in TV white spaces. In <i>Proceedings
    of the 2017 13th International Conference on emerging Networking EXperiments and
    Technologies</i> (pp. 2–14). Incheon, South Korea: ACM. <a href="https://doi.org/10.1145/3143361.3143367">https://doi.org/10.1145/3143361.3143367</a>'
  chicago: Baig, Ghufran, Bozidar Radunovic, Dan-Adrian Alistarh, Matthew Balkwill,
    Thomas Karagiannis, and Lili Qiu. “Towards Unlicensed Cellular Networks in TV
    White Spaces.” In <i>Proceedings of the 2017 13th International Conference on
    Emerging Networking EXperiments and Technologies</i>, 2–14. ACM, 2017. <a href="https://doi.org/10.1145/3143361.3143367">https://doi.org/10.1145/3143361.3143367</a>.
  ieee: G. Baig, B. Radunovic, D.-A. Alistarh, M. Balkwill, T. Karagiannis, and L.
    Qiu, “Towards unlicensed cellular networks in TV white spaces,” in <i>Proceedings
    of the 2017 13th International Conference on emerging Networking EXperiments and
    Technologies</i>, Incheon, South Korea, 2017, pp. 2–14.
  ista: 'Baig G, Radunovic B, Alistarh D-A, Balkwill M, Karagiannis T, Qiu L. 2017.
    Towards unlicensed cellular networks in TV white spaces. Proceedings of the 2017
    13th International Conference on emerging Networking EXperiments and Technologies.
    CoNEXT: Conference on emerging Networking EXperiments and Technologies, 2–14.'
  mla: Baig, Ghufran, et al. “Towards Unlicensed Cellular Networks in TV White Spaces.”
    <i>Proceedings of the 2017 13th International Conference on Emerging Networking
    EXperiments and Technologies</i>, ACM, 2017, pp. 2–14, doi:<a href="https://doi.org/10.1145/3143361.3143367">10.1145/3143361.3143367</a>.
  short: G. Baig, B. Radunovic, D.-A. Alistarh, M. Balkwill, T. Karagiannis, L. Qiu,
    in:, Proceedings of the 2017 13th International Conference on Emerging Networking
    EXperiments and Technologies, ACM, 2017, pp. 2–14.
conference:
  end_date: 2017-12-15
  location: Incheon, South Korea
  name: 'CoNEXT: Conference on emerging Networking EXperiments and Technologies'
  start_date: 2017-12-12
corr_author: '1'
date_created: 2018-12-11T11:46:45Z
date_published: 2017-11-28T00:00:00Z
date_updated: 2025-09-18T09:50:43Z
day: '28'
department:
- _id: DaAl
doi: 10.1145/3143361.3143367
external_id:
  isi:
  - '000526087500002'
isi: 1
language:
- iso: eng
month: '11'
oa_version: None
page: 2 - 14
publication: Proceedings of the 2017 13th International Conference on emerging Networking
  EXperiments and Technologies
publication_identifier:
  isbn:
  - 978-145035422-6
publication_status: published
publisher: ACM
publist_id: '7333'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Towards unlicensed cellular networks in TV white spaces
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
year: '2017'
...
---
_id: '6117'
abstract:
- lang: eng
  text: 'Interleukin-17 (IL-17) is a major pro-inflammatory cytokine: it mediates
    responses to pathogens or tissue damage, and drives autoimmune diseases. Little
    is known about its role in the nervous system. Here we show that IL-17 has neuromodulator-like
    properties in Caenorhabditis elegans. IL-17 can act directly on neurons to alter
    their response properties and contribution to behaviour. Using unbiased genetic
    screens, we delineate an IL-17 signalling pathway and show that it acts in the
    RMG hub interneurons. Disrupting IL-17 signalling reduces RMG responsiveness to
    input from oxygen sensors, and renders sustained escape from 21% oxygen transient
    and contingent on additional stimuli. Over-activating IL-17 receptors abnormally
    heightens responses to 21% oxygen in RMG neurons and whole animals. IL-17 deficiency
    can be bypassed by optogenetic stimulation of RMG. Inducing IL-17 expression in
    adults can rescue mutant defects within 6 h. These findings reveal a non-immunological
    role of IL-17 modulating circuit function and behaviour.'
author:
- first_name: Changchun
  full_name: Chen, Changchun
  last_name: Chen
- first_name: Eisuke
  full_name: Itakura, Eisuke
  last_name: Itakura
- first_name: Geoffrey M.
  full_name: Nelson, Geoffrey M.
  last_name: Nelson
- first_name: Ming
  full_name: Sheng, Ming
  last_name: Sheng
- first_name: Patrick
  full_name: Laurent, Patrick
  last_name: Laurent
- first_name: Lorenz A.
  full_name: Fenk, Lorenz A.
  last_name: Fenk
- first_name: Rebecca A.
  full_name: Butcher, Rebecca A.
  last_name: Butcher
- first_name: Ramanujan S.
  full_name: Hegde, Ramanujan S.
  last_name: Hegde
- first_name: Mario
  full_name: de Bono, Mario
  id: 4E3FF80E-F248-11E8-B48F-1D18A9856A87
  last_name: de Bono
  orcid: 0000-0001-8347-0443
citation:
  ama: Chen C, Itakura E, Nelson GM, et al. IL-17 is a neuromodulator of Caenorhabditis
    elegans sensory responses. <i>Nature</i>. 2017;542(7639):43-48. doi:<a href="https://doi.org/10.1038/nature20818">10.1038/nature20818</a>
  apa: Chen, C., Itakura, E., Nelson, G. M., Sheng, M., Laurent, P., Fenk, L. A.,
    … de Bono, M. (2017). IL-17 is a neuromodulator of Caenorhabditis elegans sensory
    responses. <i>Nature</i>. Springer Nature. <a href="https://doi.org/10.1038/nature20818">https://doi.org/10.1038/nature20818</a>
  chicago: Chen, Changchun, Eisuke Itakura, Geoffrey M. Nelson, Ming Sheng, Patrick
    Laurent, Lorenz A. Fenk, Rebecca A. Butcher, Ramanujan S. Hegde, and Mario de
    Bono. “IL-17 Is a Neuromodulator of Caenorhabditis Elegans Sensory Responses.”
    <i>Nature</i>. Springer Nature, 2017. <a href="https://doi.org/10.1038/nature20818">https://doi.org/10.1038/nature20818</a>.
  ieee: C. Chen <i>et al.</i>, “IL-17 is a neuromodulator of Caenorhabditis elegans
    sensory responses,” <i>Nature</i>, vol. 542, no. 7639. Springer Nature, pp. 43–48,
    2017.
  ista: Chen C, Itakura E, Nelson GM, Sheng M, Laurent P, Fenk LA, Butcher RA, Hegde
    RS, de Bono M. 2017. IL-17 is a neuromodulator of Caenorhabditis elegans sensory
    responses. Nature. 542(7639), 43–48.
  mla: Chen, Changchun, et al. “IL-17 Is a Neuromodulator of Caenorhabditis Elegans
    Sensory Responses.” <i>Nature</i>, vol. 542, no. 7639, Springer Nature, 2017,
    pp. 43–48, doi:<a href="https://doi.org/10.1038/nature20818">10.1038/nature20818</a>.
  short: C. Chen, E. Itakura, G.M. Nelson, M. Sheng, P. Laurent, L.A. Fenk, R.A. Butcher,
    R.S. Hegde, M. de Bono, Nature 542 (2017) 43–48.
date_created: 2019-03-19T14:06:41Z
date_published: 2017-02-02T00:00:00Z
date_updated: 2021-01-12T08:06:12Z
day: '02'
doi: 10.1038/nature20818
extern: '1'
external_id:
  pmid:
  - '    28099418'
intvolume: '       542'
issue: '7639'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://www.ncbi.nlm.nih.gov/pubmed/28099418
month: '02'
oa: 1
oa_version: Submitted Version
page: 43-48
pmid: 1
publication: Nature
publication_identifier:
  issn:
  - 0028-0836
  - 1476-4687
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
status: public
title: IL-17 is a neuromodulator of Caenorhabditis elegans sensory responses
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 542
year: '2017'
...
