---
_id: '12142'
abstract:
- lang: eng
  text: Theory for liability-scale models of the underlying genetic basis of complex
    disease provides an important way to interpret, compare, and understand results
    generated from biological studies. In particular, through estimation of the liability-scale
    heritability (LSH), liability models facilitate an understanding and comparison
    of the relative importance of genetic and environmental risk factors that shape
    different clinically important disease outcomes. Increasingly, large-scale biobank
    studies that link genetic information to electronic health records, containing
    hundreds of disease diagnosis indicators that mostly occur infrequently within
    the sample, are becoming available. Here, we propose an extension of the existing
    liability-scale model theory suitable for estimating LSH in biobank studies of
    low-prevalence disease. In a simulation study, we find that our derived expression
    yields lower mean square error (MSE) and is less sensitive to prevalence misspecification
    as compared to previous transformations for diseases with  =< 2% population prevalence
    and LSH of =< 0.45, especially if the biobank sample prevalence is less than that
    of the wider population. Applying our expression to 13 diagnostic outcomes of  =<
    3% prevalence in the UK Biobank study revealed important differences in LSH obtained
    from the different theoretical expressions that impact the conclusions made when
    comparing LSH across disease outcomes. This demonstrates the importance of careful
    consideration for estimation and prediction of low-prevalence disease outcomes
    and facilitates improved inference of the underlying genetic basis of  =< 2% population
    prevalence diseases, especially where biobank sample ascertainment results in
    a healthier sample population.
acknowledged_ssus:
- _id: ScienComp
acknowledgement: This project was funded by an SNSF Eccellenza grant to M.R.R. (PCEGP3-181181),
  core funding from the Institute of Science and Technology Austria, and core funding
  from the Department of Computational Biology of the University of Lausanne. Z.K.
  was funded by the Swiss National Science Foundation (310030-189147). This research
  was supported by the Scientific Service Units (SSUs) of IST Austria through resources
  provided by Scientific Computing (SciComp). We would like to thank the participants
  of the UK Biobank.
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Sven E.
  full_name: Ojavee, Sven E.
  last_name: Ojavee
- first_name: Zoltan
  full_name: Kutalik, Zoltan
  last_name: Kutalik
- first_name: Matthew Richard
  full_name: Robinson, Matthew Richard
  id: E5D42276-F5DA-11E9-8E24-6303E6697425
  last_name: Robinson
  orcid: 0000-0001-8982-8813
citation:
  ama: Ojavee SE, Kutalik Z, Robinson MR. Liability-scale heritability estimation
    for biobank studies of low-prevalence disease. <i>The American Journal of Human
    Genetics</i>. 2022;109(11):2009-2017. doi:<a href="https://doi.org/10.1016/j.ajhg.2022.09.011">10.1016/j.ajhg.2022.09.011</a>
  apa: Ojavee, S. E., Kutalik, Z., &#38; Robinson, M. R. (2022). Liability-scale heritability
    estimation for biobank studies of low-prevalence disease. <i>The American Journal
    of Human Genetics</i>. Elsevier. <a href="https://doi.org/10.1016/j.ajhg.2022.09.011">https://doi.org/10.1016/j.ajhg.2022.09.011</a>
  chicago: Ojavee, Sven E., Zoltan Kutalik, and Matthew Richard Robinson. “Liability-Scale
    Heritability Estimation for Biobank Studies of Low-Prevalence Disease.” <i>The
    American Journal of Human Genetics</i>. Elsevier, 2022. <a href="https://doi.org/10.1016/j.ajhg.2022.09.011">https://doi.org/10.1016/j.ajhg.2022.09.011</a>.
  ieee: S. E. Ojavee, Z. Kutalik, and M. R. Robinson, “Liability-scale heritability
    estimation for biobank studies of low-prevalence disease,” <i>The American Journal
    of Human Genetics</i>, vol. 109, no. 11. Elsevier, pp. 2009–2017, 2022.
  ista: Ojavee SE, Kutalik Z, Robinson MR. 2022. Liability-scale heritability estimation
    for biobank studies of low-prevalence disease. The American Journal of Human Genetics.
    109(11), 2009–2017.
  mla: Ojavee, Sven E., et al. “Liability-Scale Heritability Estimation for Biobank
    Studies of Low-Prevalence Disease.” <i>The American Journal of Human Genetics</i>,
    vol. 109, no. 11, Elsevier, 2022, pp. 2009–17, doi:<a href="https://doi.org/10.1016/j.ajhg.2022.09.011">10.1016/j.ajhg.2022.09.011</a>.
  short: S.E. Ojavee, Z. Kutalik, M.R. Robinson, The American Journal of Human Genetics
    109 (2022) 2009–2017.
corr_author: '1'
date_created: 2023-01-12T12:05:28Z
date_published: 2022-11-03T00:00:00Z
date_updated: 2025-06-11T13:55:19Z
day: '03'
ddc:
- '570'
department:
- _id: MaRo
doi: 10.1016/j.ajhg.2022.09.011
external_id:
  isi:
  - '000898683500006'
  pmid:
  - '36265482'
file:
- access_level: open_access
  checksum: 4cd7f12bfe21a8237bb095eedfa26361
  content_type: application/pdf
  creator: dernst
  date_created: 2023-01-24T09:23:01Z
  date_updated: 2023-01-24T09:23:01Z
  file_id: '12353'
  file_name: 2022_AJHG_Ojavee.pdf
  file_size: 705195
  relation: main_file
  success: 1
file_date_updated: 2023-01-24T09:23:01Z
has_accepted_license: '1'
intvolume: '       109'
isi: 1
issue: '11'
keyword:
- Genetics (clinical)
- Genetics
language:
- iso: eng
month: '11'
oa: 1
oa_version: Published Version
page: 2009-2017
pmid: 1
project:
- _id: 9B8D11D6-BA93-11EA-9121-9846C619BF3A
  grant_number: PCEGP3_181181
  name: Improving estimation and prediction of common complex disease risk
publication: The American Journal of Human Genetics
publication_identifier:
  issn:
  - 0002-9297
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Liability-scale heritability estimation for biobank studies of low-prevalence
  disease
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 109
year: '2022'
...
---
_id: '12151'
abstract:
- lang: eng
  text: The k-sample G(k,W) from a graphon W:[0,1]2→[0,1] is the random graph on {1,…,k},
    where we sample x1,…,xk∈[0,1] uniformly at random and make each pair {i,j}⊆{1,…,k}
    an edge with probability W(xi,xj), with all these choices being mutually independent.
    Let the random variable Xk(W) be the number of edges in  G(k,W). Vera T. Sós asked
    in 2012 whether two graphons U, W are necessarily weakly isomorphic if the random
    variables Xk(U) and Xk(W) have the same distribution for every integer k≥2. This
    question when one of the graphons W is a constant function was answered positively
    by Endre Csóka and independently by Jacob Fox, Tomasz Łuczak and Vera T. Sós.
    Here we investigate the question when W is a 2-step graphon and prove that the
    answer is positive for a 3-dimensional family of such graphons. We also present
    some related results.
acknowledgement: "Supported by Austrian Science Fund (FWF) Grant I3747. Supported
  by ERC Advanced Grant 101020255 and Leverhulme Research Project Grant RPG-2018-424.\r\nAn
  extended abstract of this paper appeared in the Proceedings of the European Conference\r\non
  Combinatorics, Graph Theory and Applications (EuroComb 2021), CRM Research Perspectives,
  Springer."
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Oliver
  full_name: Cooley, Oliver
  id: 43f4ddd0-a46b-11ec-8df6-ef3703bd721d
  last_name: Cooley
- first_name: M.
  full_name: Kang, M.
  last_name: Kang
- first_name: O.
  full_name: Pikhurko, O.
  last_name: Pikhurko
citation:
  ama: Cooley O, Kang M, Pikhurko O. On a question of Vera T. Sós about size forcing
    of graphons. <i>Acta Mathematica Hungarica</i>. 2022;168:1-26. doi:<a href="https://doi.org/10.1007/s10474-022-01265-8">10.1007/s10474-022-01265-8</a>
  apa: Cooley, O., Kang, M., &#38; Pikhurko, O. (2022). On a question of Vera T. Sós
    about size forcing of graphons. <i>Acta Mathematica Hungarica</i>. Springer Nature.
    <a href="https://doi.org/10.1007/s10474-022-01265-8">https://doi.org/10.1007/s10474-022-01265-8</a>
  chicago: Cooley, Oliver, M. Kang, and O. Pikhurko. “On a Question of Vera T. Sós
    about Size Forcing of Graphons.” <i>Acta Mathematica Hungarica</i>. Springer Nature,
    2022. <a href="https://doi.org/10.1007/s10474-022-01265-8">https://doi.org/10.1007/s10474-022-01265-8</a>.
  ieee: O. Cooley, M. Kang, and O. Pikhurko, “On a question of Vera T. Sós about size
    forcing of graphons,” <i>Acta Mathematica Hungarica</i>, vol. 168. Springer Nature,
    pp. 1–26, 2022.
  ista: Cooley O, Kang M, Pikhurko O. 2022. On a question of Vera T. Sós about size
    forcing of graphons. Acta Mathematica Hungarica. 168, 1–26.
  mla: Cooley, Oliver, et al. “On a Question of Vera T. Sós about Size Forcing of
    Graphons.” <i>Acta Mathematica Hungarica</i>, vol. 168, Springer Nature, 2022,
    pp. 1–26, doi:<a href="https://doi.org/10.1007/s10474-022-01265-8">10.1007/s10474-022-01265-8</a>.
  short: O. Cooley, M. Kang, O. Pikhurko, Acta Mathematica Hungarica 168 (2022) 1–26.
corr_author: '1'
date_created: 2023-01-12T12:07:59Z
date_published: 2022-11-23T00:00:00Z
date_updated: 2024-10-09T21:03:37Z
day: '23'
department:
- _id: MaKw
doi: 10.1007/s10474-022-01265-8
external_id:
  arxiv:
  - '2103.09114'
  isi:
  - '000886839900006'
intvolume: '       168'
isi: 1
keyword:
- graphon
- k-sample
- graphon forcing
- graph container
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: ' https://doi.org/10.48550/arXiv.2103.09114'
month: '11'
oa: 1
oa_version: Preprint
page: 1-26
publication: Acta Mathematica Hungarica
publication_identifier:
  eissn:
  - 1588-2632
  issn:
  - 0236-5294
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: On a question of Vera T. Sós about size forcing of graphons
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 168
year: '2022'
...
---
_id: '12167'
abstract:
- lang: eng
  text: "Payment channels effectively move the transaction load off-chain thereby
    successfully addressing the inherent scalability problem most cryptocurrencies
    face. A major drawback of payment channels is the need to “top up” funds on-chain
    when a channel is depleted. Rebalancing was proposed to alleviate this issue,
    where parties with depleting channels move their funds along a cycle to replenish
    their channels off-chain. Protocols for rebalancing so far either introduce local
    solutions or compromise privacy.\r\nIn this work, we present an opt-in rebalancing
    protocol that is both private and globally optimal, meaning our protocol maximizes
    the total amount of rebalanced funds. We study rebalancing from the framework
    of linear programming. To obtain full privacy guarantees, we leverage multi-party
    computation in solving the linear program, which is executed by selected participants
    to maintain efficiency. Finally, we efficiently decompose the rebalancing solution
    into incentive-compatible cycles which conserve user balances when executed atomically."
alternative_title:
- LNCS
article_processing_charge: No
arxiv: 1
author:
- first_name: Georgia
  full_name: Avarikioti, Georgia
  id: c20482a0-3b89-11eb-9862-88cf6404b88c
  last_name: Avarikioti
- first_name: Krzysztof Z
  full_name: Pietrzak, Krzysztof Z
  id: 3E04A7AA-F248-11E8-B48F-1D18A9856A87
  last_name: Pietrzak
  orcid: 0000-0002-9139-1654
- first_name: Iosif
  full_name: Salem, Iosif
  last_name: Salem
- first_name: Stefan
  full_name: Schmid, Stefan
  last_name: Schmid
- first_name: Samarth
  full_name: Tiwari, Samarth
  last_name: Tiwari
- first_name: Michelle X
  full_name: Yeo, Michelle X
  id: 2D82B818-F248-11E8-B48F-1D18A9856A87
  last_name: Yeo
  orcid: 0009-0001-3676-4809
citation:
  ama: 'Avarikioti G, Pietrzak KZ, Salem I, Schmid S, Tiwari S, Yeo MX. Hide &#38;
    Seek: Privacy-preserving rebalancing on payment channel networks. In: <i>Financial
    Cryptography and Data Security</i>. Vol 13411. Springer Nature; 2022:358-373.
    doi:<a href="https://doi.org/10.1007/978-3-031-18283-9_17">10.1007/978-3-031-18283-9_17</a>'
  apa: 'Avarikioti, G., Pietrzak, K. Z., Salem, I., Schmid, S., Tiwari, S., &#38;
    Yeo, M. X. (2022). Hide &#38; Seek: Privacy-preserving rebalancing on payment
    channel networks. In <i>Financial Cryptography and Data Security</i> (Vol. 13411,
    pp. 358–373). Grenada: Springer Nature. <a href="https://doi.org/10.1007/978-3-031-18283-9_17">https://doi.org/10.1007/978-3-031-18283-9_17</a>'
  chicago: 'Avarikioti, Georgia, Krzysztof Z Pietrzak, Iosif Salem, Stefan Schmid,
    Samarth Tiwari, and Michelle X Yeo. “Hide &#38; Seek: Privacy-Preserving Rebalancing
    on Payment Channel Networks.” In <i>Financial Cryptography and Data Security</i>,
    13411:358–73. Springer Nature, 2022. <a href="https://doi.org/10.1007/978-3-031-18283-9_17">https://doi.org/10.1007/978-3-031-18283-9_17</a>.'
  ieee: 'G. Avarikioti, K. Z. Pietrzak, I. Salem, S. Schmid, S. Tiwari, and M. X.
    Yeo, “Hide &#38; Seek: Privacy-preserving rebalancing on payment channel networks,”
    in <i>Financial Cryptography and Data Security</i>, Grenada, 2022, vol. 13411,
    pp. 358–373.'
  ista: 'Avarikioti G, Pietrzak KZ, Salem I, Schmid S, Tiwari S, Yeo MX. 2022. Hide
    &#38; Seek: Privacy-preserving rebalancing on payment channel networks. Financial
    Cryptography and Data Security. FC: Financial Cryptography and Data Security,
    LNCS, vol. 13411, 358–373.'
  mla: 'Avarikioti, Georgia, et al. “Hide &#38; Seek: Privacy-Preserving Rebalancing
    on Payment Channel Networks.” <i>Financial Cryptography and Data Security</i>,
    vol. 13411, Springer Nature, 2022, pp. 358–73, doi:<a href="https://doi.org/10.1007/978-3-031-18283-9_17">10.1007/978-3-031-18283-9_17</a>.'
  short: G. Avarikioti, K.Z. Pietrzak, I. Salem, S. Schmid, S. Tiwari, M.X. Yeo, in:,
    Financial Cryptography and Data Security, Springer Nature, 2022, pp. 358–373.
conference:
  end_date: 2022-05-06
  location: Grenada
  name: 'FC: Financial Cryptography and Data Security'
  start_date: 2022-05-02
date_created: 2023-01-12T12:10:38Z
date_published: 2022-10-22T00:00:00Z
date_updated: 2025-09-10T09:48:15Z
day: '22'
department:
- _id: KrPi
doi: 10.1007/978-3-031-18283-9_17
external_id:
  arxiv:
  - '2110.08848'
  isi:
  - '001423640200017'
intvolume: '     13411'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2110.08848
month: '10'
oa: 1
oa_version: Preprint
page: 358-373
publication: Financial Cryptography and Data Security
publication_identifier:
  eisbn:
  - '9783031182839'
  eissn:
  - 1611-3349
  isbn:
  - '9783031182822'
  issn:
  - 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Hide & Seek: Privacy-preserving rebalancing on payment channel networks'
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 13411
year: '2022'
...
---
OA_place: repository
OA_type: green
_id: '12168'
abstract:
- lang: eng
  text: "Advances in blockchains have influenced the State-Machine-Replication (SMR)
    world and many state-of-the-art blockchain-SMR solutions are based on two pillars:
    Chaining and Leader-rotation. A predetermined round-robin mechanism used for Leader-rotation,
    however, has an undesirable behavior: crashed parties become designated leaders
    infinitely often, slowing down overall system performance. In this paper, we provide
    a new Leader-Aware SMR framework that, among other desirable properties, formalizes
    a Leader-utilization requirement that bounds the number of rounds whose leaders
    are faulty in crash-only executions.\r\nWe introduce Carousel, a novel, reputation-based
    Leader-rotation solution to achieve Leader-Aware SMR. The challenge in adaptive
    Leader-rotation is that it cannot rely on consensus to determine a leader, since
    consensus itself needs a leader. Carousel uses the available on-chain information
    to determine a leader locally and achieves Liveness despite this difficulty. A
    HotStuff implementation fitted with Carousel demonstrates drastic performance
    improvements: it increases throughput over 2x in faultless settings and provided
    a 20x throughput increase and 5x latency reduction in the presence of faults."
alternative_title:
- LNCS
article_processing_charge: No
arxiv: 1
author:
- first_name: Shir
  full_name: Cohen, Shir
  last_name: Cohen
- first_name: Rati
  full_name: Gelashvili, Rati
  last_name: Gelashvili
- first_name: Eleftherios
  full_name: Kokoris Kogias, Eleftherios
  id: f5983044-d7ef-11ea-ac6d-fd1430a26d30
  last_name: Kokoris Kogias
- first_name: Zekun
  full_name: Li, Zekun
  last_name: Li
- first_name: Dahlia
  full_name: Malkhi, Dahlia
  last_name: Malkhi
- first_name: Alberto
  full_name: Sonnino, Alberto
  last_name: Sonnino
- first_name: Alexander
  full_name: Spiegelman, Alexander
  last_name: Spiegelman
citation:
  ama: 'Cohen S, Gelashvili R, Kokoris Kogias E, et al. Be aware of your leaders.
    In: <i>International Conference on Financial Cryptography and Data Security</i>.
    Vol 13411. Springer Nature; 2022:279-295. doi:<a href="https://doi.org/10.1007/978-3-031-18283-9_13">10.1007/978-3-031-18283-9_13</a>'
  apa: 'Cohen, S., Gelashvili, R., Kokoris Kogias, E., Li, Z., Malkhi, D., Sonnino,
    A., &#38; Spiegelman, A. (2022). Be aware of your leaders. In <i>International
    Conference on Financial Cryptography and Data Security</i> (Vol. 13411, pp. 279–295).
    Grenada: Springer Nature. <a href="https://doi.org/10.1007/978-3-031-18283-9_13">https://doi.org/10.1007/978-3-031-18283-9_13</a>'
  chicago: Cohen, Shir, Rati Gelashvili, Eleftherios Kokoris Kogias, Zekun Li, Dahlia
    Malkhi, Alberto Sonnino, and Alexander Spiegelman. “Be Aware of Your Leaders.”
    In <i>International Conference on Financial Cryptography and Data Security</i>,
    13411:279–95. Springer Nature, 2022. <a href="https://doi.org/10.1007/978-3-031-18283-9_13">https://doi.org/10.1007/978-3-031-18283-9_13</a>.
  ieee: S. Cohen <i>et al.</i>, “Be aware of your leaders,” in <i>International Conference
    on Financial Cryptography and Data Security</i>, Grenada, 2022, vol. 13411, pp.
    279–295.
  ista: 'Cohen S, Gelashvili R, Kokoris Kogias E, Li Z, Malkhi D, Sonnino A, Spiegelman
    A. 2022. Be aware of your leaders. International Conference on Financial Cryptography
    and Data Security. FC: Financial Cryptography and Data Security, LNCS, vol. 13411,
    279–295.'
  mla: Cohen, Shir, et al. “Be Aware of Your Leaders.” <i>International Conference
    on Financial Cryptography and Data Security</i>, vol. 13411, Springer Nature,
    2022, pp. 279–95, doi:<a href="https://doi.org/10.1007/978-3-031-18283-9_13">10.1007/978-3-031-18283-9_13</a>.
  short: S. Cohen, R. Gelashvili, E. Kokoris Kogias, Z. Li, D. Malkhi, A. Sonnino,
    A. Spiegelman, in:, International Conference on Financial Cryptography and Data
    Security, Springer Nature, 2022, pp. 279–295.
conference:
  end_date: 2022-05-06
  location: Grenada
  name: 'FC: Financial Cryptography and Data Security'
  start_date: 2022-05-02
date_created: 2023-01-12T12:10:49Z
date_published: 2022-10-22T00:00:00Z
date_updated: 2025-09-10T09:48:54Z
day: '22'
department:
- _id: ElKo
doi: 10.1007/978-3-031-18283-9_13
external_id:
  arxiv:
  - '2110.00960'
  isi:
  - '001423640200013'
intvolume: '     13411'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2110.00960
month: '10'
oa: 1
oa_version: Preprint
page: 279-295
publication: International Conference on Financial Cryptography and Data Security
publication_identifier:
  eisbn:
  - '9783031182839'
  eissn:
  - 1611-3349
  isbn:
  - '9783031182822'
  issn:
  - 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Be aware of your leaders
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 13411
year: '2022'
...
---
_id: '12170'
abstract:
- lang: eng
  text: We present PET, a specialized and highly optimized framework for partial exploration
    on probabilistic systems. Over the last decade, several significant advances in
    the analysis of Markov decision processes employed partial exploration. In a nutshell,
    this idea allows to focus computation on specific parts of the system, guided
    by heuristics, while maintaining correctness. In particular, only relevant parts
    of the system are constructed on demand, which in turn potentially allows to omit
    constructing large parts of the system. Depending on the model, this leads to
    dramatic speed-ups, in extreme cases even up to an arbitrary factor. PET unifies
    several previous implementations and provides a flexible framework to easily implement
    partial exploration for many further problems. Our experimental evaluation shows
    significant improvements compared to the previous implementations while vastly
    reducing the overhead required to add support for additional properties.
acknowledgement: We thank Pranav Ashok and Maximilian Weininger for their contributions
  to spiritual predecessors of PET as well as motivating the initial development of
  this tool.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Tobias
  full_name: Meggendorfer, Tobias
  id: b21b0c15-30a2-11eb-80dc-f13ca25802e1
  last_name: Meggendorfer
  orcid: 0000-0002-1712-2165
citation:
  ama: 'Meggendorfer T. PET – A partial exploration tool for probabilistic verification.
    In: <i>20th International Symposium on Automated Technology for Verification and
    Analysis</i>. Vol 13505. Springer Nature; 2022:320-326. doi:<a href="https://doi.org/10.1007/978-3-031-19992-9_20">10.1007/978-3-031-19992-9_20</a>'
  apa: 'Meggendorfer, T. (2022). PET – A partial exploration tool for probabilistic
    verification. In <i>20th International Symposium on Automated Technology for Verification
    and Analysis</i> (Vol. 13505, pp. 320–326). Virtual: Springer Nature. <a href="https://doi.org/10.1007/978-3-031-19992-9_20">https://doi.org/10.1007/978-3-031-19992-9_20</a>'
  chicago: Meggendorfer, Tobias. “PET – A Partial Exploration Tool for Probabilistic
    Verification.” In <i>20th International Symposium on Automated Technology for
    Verification and Analysis</i>, 13505:320–26. Springer Nature, 2022. <a href="https://doi.org/10.1007/978-3-031-19992-9_20">https://doi.org/10.1007/978-3-031-19992-9_20</a>.
  ieee: T. Meggendorfer, “PET – A partial exploration tool for probabilistic verification,”
    in <i>20th International Symposium on Automated Technology for Verification and
    Analysis</i>, Virtual, 2022, vol. 13505, pp. 320–326.
  ista: 'Meggendorfer T. 2022. PET – A partial exploration tool for probabilistic
    verification. 20th International Symposium on Automated Technology for Verification
    and Analysis. ATVA: Automated Technology for Verification and Analysis, LNCS,
    vol. 13505, 320–326.'
  mla: Meggendorfer, Tobias. “PET – A Partial Exploration Tool for Probabilistic Verification.”
    <i>20th International Symposium on Automated Technology for Verification and Analysis</i>,
    vol. 13505, Springer Nature, 2022, pp. 320–26, doi:<a href="https://doi.org/10.1007/978-3-031-19992-9_20">10.1007/978-3-031-19992-9_20</a>.
  short: T. Meggendorfer, in:, 20th International Symposium on Automated Technology
    for Verification and Analysis, Springer Nature, 2022, pp. 320–326.
conference:
  end_date: 2022-10-28
  location: Virtual
  name: 'ATVA: Automated Technology for Verification and Analysis'
  start_date: 2022-10-25
corr_author: '1'
date_created: 2023-01-12T12:11:07Z
date_published: 2022-10-21T00:00:00Z
date_updated: 2025-09-10T09:49:29Z
day: '21'
department:
- _id: KrCh
doi: 10.1007/978-3-031-19992-9_20
external_id:
  isi:
  - '001456146500020'
intvolume: '     13505'
isi: 1
language:
- iso: eng
month: '10'
oa_version: None
page: 320-326
publication: 20th International Symposium on Automated Technology for Verification
  and Analysis
publication_identifier:
  eisbn:
  - '9783031199929'
  eissn:
  - 1611-3349
  isbn:
  - '9783031199912'
  issn:
  - 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: PET – A partial exploration tool for probabilistic verification
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 13505
year: '2022'
...
---
_id: '12171'
abstract:
- lang: eng
  text: 'We propose an algorithmic approach for synthesizing linear hybrid automata
    from time-series data. Unlike existing approaches, our approach provides a whole
    family of models with the same discrete structure but different dynamics. Each
    model in the family is guaranteed to capture the input data up to a precision
    error ε, in the following sense: For each time series, the model contains an execution
    that is ε-close to the data points. Our construction allows to effectively choose
    a model from this family with minimal precision error ε. We demonstrate the algorithm’s
    efficiency and its ability to find precise models in two case studies.'
acknowledgement: This work was supported in part by the European Union’s Horizon 2020
  research and innovation programme under the Marie Skłodowska-Curie grant agreement
  no. 847635, by the ERC-2020-AdG 101020093, by DIREC - Digital Research Centre Denmark,
  and by the Villum Investigator Grant S4OS.
alternative_title:
- LNCS
article_processing_charge: No
arxiv: 1
author:
- first_name: Miriam
  full_name: Garcia Soto, Miriam
  id: 4B3207F6-F248-11E8-B48F-1D18A9856A87
  last_name: Garcia Soto
  orcid: 0000-0003-2936-5719
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000-0002-2985-7724
- first_name: Christian
  full_name: Schilling, Christian
  id: 3A2F4DCE-F248-11E8-B48F-1D18A9856A87
  last_name: Schilling
  orcid: 0000-0003-3658-1065
citation:
  ama: 'Garcia Soto M, Henzinger TA, Schilling C. Synthesis of parametric hybrid automata
    from time series. In: <i>20th International Symposium on Automated Technology
    for Verification and Analysis</i>. Vol 13505. Springer Nature; 2022:337-353. doi:<a
    href="https://doi.org/10.1007/978-3-031-19992-9_22">10.1007/978-3-031-19992-9_22</a>'
  apa: 'Garcia Soto, M., Henzinger, T. A., &#38; Schilling, C. (2022). Synthesis of parametric
    hybrid automata from time series. In <i>20th International Symposium on Automated
    Technology for Verification and Analysis</i> (Vol. 13505, pp. 337–353). Virtual:
    Springer Nature. <a href="https://doi.org/10.1007/978-3-031-19992-9_22">https://doi.org/10.1007/978-3-031-19992-9_22</a>'
  chicago: Garcia Soto, Miriam, Thomas A Henzinger, and Christian Schilling. “Synthesis
    of Parametric Hybrid Automata from Time Series.” In <i>20th International Symposium
    on Automated Technology for Verification and Analysis</i>, 13505:337–53. Springer
    Nature, 2022. <a href="https://doi.org/10.1007/978-3-031-19992-9_22">https://doi.org/10.1007/978-3-031-19992-9_22</a>.
  ieee: M. Garcia Soto, T. A. Henzinger, and C. Schilling, “Synthesis of parametric
    hybrid automata from time series,” in <i>20th International Symposium on Automated
    Technology for Verification and Analysis</i>, Virtual, 2022, vol. 13505, pp. 337–353.
  ista: 'Garcia Soto M, Henzinger TA, Schilling C. 2022. Synthesis of parametric hybrid
    automata from time series. 20th International Symposium on Automated Technology
    for Verification and Analysis. ATVA: Automated Technology for Verification and
    Analysis, LNCS, vol. 13505, 337–353.'
  mla: Garcia Soto, Miriam, et al. “Synthesis of Parametric Hybrid Automata from Time
    Series.” <i>20th International Symposium on Automated Technology for Verification
    and Analysis</i>, vol. 13505, Springer Nature, 2022, pp. 337–53, doi:<a href="https://doi.org/10.1007/978-3-031-19992-9_22">10.1007/978-3-031-19992-9_22</a>.
  short: M. Garcia Soto, T.A. Henzinger, C. Schilling, in:, 20th International Symposium
    on Automated Technology for Verification and Analysis, Springer Nature, 2022,
    pp. 337–353.
conference:
  end_date: 2022-10-28
  location: Virtual
  name: 'ATVA: Automated Technology for Verification and Analysis'
  start_date: 2022-10-25
corr_author: '1'
date_created: 2023-01-12T12:11:16Z
date_published: 2022-10-21T00:00:00Z
date_updated: 2025-09-10T09:50:08Z
day: '21'
department:
- _id: ToHe
doi: 10.1007/978-3-031-19992-9_22
ec_funded: 1
external_id:
  arxiv:
  - '2208.06383'
  isi:
  - '001456146500022'
intvolume: '     13505'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2208.06383
month: '10'
oa: 1
oa_version: Preprint
page: 337-353
project:
- _id: 62781420-2b32-11ec-9570-8d9b63373d4d
  call_identifier: H2020
  grant_number: '101020093'
  name: Vigilant Algorithmic Monitoring of Software
publication: 20th International Symposium on Automated Technology for Verification
  and Analysis
publication_identifier:
  eisbn:
  - '9783031199929'
  eissn:
  - 1611-3349
  isbn:
  - '9783031199912'
  issn:
  - 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Synthesis of parametric hybrid automata from time series
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 13505
year: '2022'
...
---
_id: '12175'
abstract:
- lang: eng
  text: An automaton is history-deterministic (HD) if one can safely resolve its non-deterministic
    choices on the fly. In a recent paper, Henzinger, Lehtinen and Totzke studied
    this in the context of Timed Automata [9], where it was conjectured that the class
    of timed ω-languages recognised by HD-timed automata strictly extends that of
    deterministic ones. We provide a proof for this fact.
acknowledgement: This work was supported in part by the ERC-2020-AdG 101020093, the
  EPSRC project EP/V025848/1, and the EPSRC project EP/X017796/1.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Sougata
  full_name: Bose, Sougata
  last_name: Bose
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000-0002-2985-7724
- first_name: Karoliina
  full_name: Lehtinen, Karoliina
  last_name: Lehtinen
- first_name: Sven
  full_name: Schewe, Sven
  last_name: Schewe
- first_name: Patrick
  full_name: Totzke, Patrick
  last_name: Totzke
citation:
  ama: 'Bose S, Henzinger TA, Lehtinen K, Schewe S, Totzke P. History-deterministic
    timed automata are not determinizable. In: <i>16th International Conference on
    Reachability Problems</i>. Vol 13608. Springer Nature; 2022:67-76. doi:<a href="https://doi.org/10.1007/978-3-031-19135-0_5">10.1007/978-3-031-19135-0_5</a>'
  apa: 'Bose, S., Henzinger, T. A., Lehtinen, K., Schewe, S., &#38; Totzke, P. (2022).
    History-deterministic timed automata are not determinizable. In <i>16th International
    Conference on Reachability Problems</i> (Vol. 13608, pp. 67–76). Kaiserslautern,
    Germany: Springer Nature. <a href="https://doi.org/10.1007/978-3-031-19135-0_5">https://doi.org/10.1007/978-3-031-19135-0_5</a>'
  chicago: Bose, Sougata, Thomas A Henzinger, Karoliina Lehtinen, Sven Schewe, and
    Patrick Totzke. “History-Deterministic Timed Automata Are Not Determinizable.”
    In <i>16th International Conference on Reachability Problems</i>, 13608:67–76.
    Springer Nature, 2022. <a href="https://doi.org/10.1007/978-3-031-19135-0_5">https://doi.org/10.1007/978-3-031-19135-0_5</a>.
  ieee: S. Bose, T. A. Henzinger, K. Lehtinen, S. Schewe, and P. Totzke, “History-deterministic
    timed automata are not determinizable,” in <i>16th International Conference on
    Reachability Problems</i>, Kaiserslautern, Germany, 2022, vol. 13608, pp. 67–76.
  ista: 'Bose S, Henzinger TA, Lehtinen K, Schewe S, Totzke P. 2022. History-deterministic
    timed automata are not determinizable. 16th International Conference on Reachability
    Problems. RC: Reachability Problems, LNCS, vol. 13608, 67–76.'
  mla: Bose, Sougata, et al. “History-Deterministic Timed Automata Are Not Determinizable.”
    <i>16th International Conference on Reachability Problems</i>, vol. 13608, Springer
    Nature, 2022, pp. 67–76, doi:<a href="https://doi.org/10.1007/978-3-031-19135-0_5">10.1007/978-3-031-19135-0_5</a>.
  short: S. Bose, T.A. Henzinger, K. Lehtinen, S. Schewe, P. Totzke, in:, 16th International
    Conference on Reachability Problems, Springer Nature, 2022, pp. 67–76.
conference:
  end_date: 2022-10-21
  location: Kaiserslautern, Germany
  name: 'RC: Reachability Problems'
  start_date: 2022-10-17
date_created: 2023-01-12T12:11:57Z
date_published: 2022-10-12T00:00:00Z
date_updated: 2025-09-10T09:50:45Z
day: '12'
department:
- _id: ToHe
doi: 10.1007/978-3-031-19135-0_5
ec_funded: 1
external_id:
  isi:
  - '001333698300005'
intvolume: '     13608'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://hal.science/hal-03849398/
month: '10'
oa: 1
oa_version: Preprint
page: 67-76
project:
- _id: 62781420-2b32-11ec-9570-8d9b63373d4d
  call_identifier: H2020
  grant_number: '101020093'
  name: Vigilant Algorithmic Monitoring of Software
publication: 16th International Conference on Reachability Problems
publication_identifier:
  eisbn:
  - '9783031191350'
  eissn:
  - 1611-3349
  isbn:
  - '9783031191343'
  issn:
  - 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: History-deterministic timed automata are not determinizable
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 13608
year: '2022'
...
---
_id: '12176'
abstract:
- lang: eng
  text: "A proof of exponentiation (PoE) in a group G of unknown order allows a prover
    to convince a verifier that a tuple (x,q,T,y)∈G×N×N×G satisfies xqT=y. This primitive
    has recently found exciting applications in the constructions of verifiable delay
    functions and succinct arguments of knowledge. The most practical PoEs only achieve
    soundness either under computational assumptions, i.e., they are arguments (Wesolowski,
    Journal of Cryptology 2020), or in groups that come with the promise of not having
    any small subgroups (Pietrzak, ITCS 2019). The only statistically-sound PoE in
    general groups of unknown order is due to Block et al. (CRYPTO 2021), and can
    be seen as an elaborate parallel repetition of Pietrzak’s PoE: to achieve λ bits
    of security, say λ=80, the number of repetitions required (and thus the blow-up
    in communication) is as large as λ.\r\n\r\nIn this work, we propose a statistically-sound
    PoE for the case where the exponent q is the product of all primes up to some
    bound B. We show that, in this case, it suffices to run only λ/log(B) parallel
    instances of Pietrzak’s PoE, which reduces the concrete proof-size compared to
    Block et al. by an order of magnitude. Furthermore, we show that in the known
    applications where PoEs are used as a building block such structured exponents
    are viable. Finally, we also discuss batching of our PoE, showing that many proofs
    (for the same G and q but different x and T) can be batched by adding only a single
    element to the proof per additional statement."
acknowledgement: "We would like to thank the authors of [BHR+21] for clarifying several
  questions we had\r\nregarding their results. Pavel Hubá£ek was supported by the
  Grant Agency of the Czech\r\nRepublic under the grant agreement no. 19-27871X and
  by the Charles University project\r\nUNCE/SCI/004. Chethan Kamath is supported by
  Azrieli International Postdoctoral Fellowship\r\nand ISF grants 484/18 and 1789/19.
  Karen Klein was supported in part by ERC CoG grant\r\n724307 and conducted part
  of this work at Institute of Science and Technology Austria."
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Charlotte
  full_name: Hoffmann, Charlotte
  id: 0f78d746-dc7d-11ea-9b2f-83f92091afe7
  last_name: Hoffmann
  orcid: 0000-0003-2027-5549
- first_name: Pavel
  full_name: Hubáček, Pavel
  last_name: Hubáček
- first_name: Chethan
  full_name: Kamath, Chethan
  last_name: Kamath
- first_name: Karen
  full_name: Klein, Karen
  last_name: Klein
- first_name: Krzysztof Z
  full_name: Pietrzak, Krzysztof Z
  id: 3E04A7AA-F248-11E8-B48F-1D18A9856A87
  last_name: Pietrzak
  orcid: 0000-0002-9139-1654
citation:
  ama: 'Hoffmann C, Hubáček P, Kamath C, Klein K, Pietrzak KZ. Practical statistically-sound
    proofs of exponentiation in any group. In: <i>Advances in Cryptology – CRYPTO
    2022</i>. Vol 13508. Springer Nature; 2022:370-399. doi:<a href="https://doi.org/10.1007/978-3-031-15979-4_13">10.1007/978-3-031-15979-4_13</a>'
  apa: 'Hoffmann, C., Hubáček, P., Kamath, C., Klein, K., &#38; Pietrzak, K. Z. (2022).
    Practical statistically-sound proofs of exponentiation in any group. In <i>Advances
    in Cryptology – CRYPTO 2022</i> (Vol. 13508, pp. 370–399). Santa Barbara, CA,
    United States: Springer Nature. <a href="https://doi.org/10.1007/978-3-031-15979-4_13">https://doi.org/10.1007/978-3-031-15979-4_13</a>'
  chicago: Hoffmann, Charlotte, Pavel Hubáček, Chethan Kamath, Karen Klein, and Krzysztof
    Z Pietrzak. “Practical Statistically-Sound Proofs of Exponentiation in Any Group.”
    In <i>Advances in Cryptology – CRYPTO 2022</i>, 13508:370–99. Springer Nature,
    2022. <a href="https://doi.org/10.1007/978-3-031-15979-4_13">https://doi.org/10.1007/978-3-031-15979-4_13</a>.
  ieee: C. Hoffmann, P. Hubáček, C. Kamath, K. Klein, and K. Z. Pietrzak, “Practical
    statistically-sound proofs of exponentiation in any group,” in <i>Advances in
    Cryptology – CRYPTO 2022</i>, Santa Barbara, CA, United States, 2022, vol. 13508,
    pp. 370–399.
  ista: 'Hoffmann C, Hubáček P, Kamath C, Klein K, Pietrzak KZ. 2022. Practical statistically-sound
    proofs of exponentiation in any group. Advances in Cryptology – CRYPTO 2022. CRYPTO:
    International Cryptology Conference, LNCS, vol. 13508, 370–399.'
  mla: Hoffmann, Charlotte, et al. “Practical Statistically-Sound Proofs of Exponentiation
    in Any Group.” <i>Advances in Cryptology – CRYPTO 2022</i>, vol. 13508, Springer
    Nature, 2022, pp. 370–99, doi:<a href="https://doi.org/10.1007/978-3-031-15979-4_13">10.1007/978-3-031-15979-4_13</a>.
  short: C. Hoffmann, P. Hubáček, C. Kamath, K. Klein, K.Z. Pietrzak, in:, Advances
    in Cryptology – CRYPTO 2022, Springer Nature, 2022, pp. 370–399.
conference:
  end_date: 2022-08-18
  location: Santa Barbara, CA, United States
  name: 'CRYPTO: International Cryptology Conference'
  start_date: 2022-08-15
corr_author: '1'
date_created: 2023-01-12T12:12:07Z
date_published: 2022-10-13T00:00:00Z
date_updated: 2026-04-07T12:34:30Z
day: '13'
department:
- _id: KrPi
doi: 10.1007/978-3-031-15979-4_13
external_id:
  isi:
  - '000886792700013'
intvolume: '     13508'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://eprint.iacr.org/2022/1021
month: '10'
oa: 1
oa_version: Preprint
page: 370-399
publication: Advances in Cryptology – CRYPTO 2022
publication_identifier:
  eisbn:
  - '9783031159794'
  eissn:
  - 1611-3349
  isbn:
  - '9783031159787'
  issn:
  - 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
  record:
  - id: '20920'
    relation: dissertation_contains
    status: public
  - id: '20556'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: Practical statistically-sound proofs of exponentiation in any group
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 13508
year: '2022'
...
---
_id: '12226'
abstract:
- lang: eng
  text: "Background: Biases of DNA repair can shape the nucleotide landscape of genomes
    at evolutionary timescales. The molecular mechanisms of those biases are still
    poorly understood because it is difficult to isolate the contributions of DNA
    repair from those of DNA damage.\r\n\r\nResults: Here, we develop a genome-wide
    assay whereby the same DNA lesion is repaired in different genomic contexts. We
    insert thousands of barcoded transposons carrying a reporter of DNA mismatch repair
    in the genome of mouse embryonic stem cells. Upon inducing a double-strand break
    between tandem repeats, a mismatch is generated if the break is repaired through
    single-strand annealing. The resolution of the mismatch showed a 60–80% bias in
    favor of the strand with the longest 3′ flap. The location of the lesion in the
    genome and the type of mismatch had little influence on the bias. Instead, we
    observe a complete reversal of the bias when the longest 3′ flap is moved to the
    opposite strand by changing the position of the double-strand break in the reporter.\r\n\r\nConclusions:
    These results suggest that the processing of the double-strand break has a major
    influence on the repair of mismatches during single-strand annealing."
acknowledgement: We acknowledge the financial support of the Natural Sciences and
  Engineering Research Council of Canada (NSERC RGPIN-2020-06377), the Spanish Ministry
  of Economy, Industry and Competitiveness (“Centro de Excelencia Severo Ochoa 2013-2017”,
  Plan Estatal PGC2018-099807-B-I00), of the CERCA Programme/Generalitat de Catalunya,
  and of the European Research Council (Synergy Grant 609989). VOP was supported by
  the European Union’s Horizon 2020 research and innovation program under the Marie
  Skłodowska-Curie programme (665385). We also acknowledge the support of the Spanish
  Ministry of Economy and Competitiveness (MEIC) to the EMBL partnership.
article_number: '93'
article_processing_charge: No
article_type: original
author:
- first_name: Victoria
  full_name: Pokusaeva, Victoria
  id: 3184041C-F248-11E8-B48F-1D18A9856A87
  last_name: Pokusaeva
  orcid: 0000-0001-7660-444X
- first_name: Aránzazu Rosado
  full_name: Diez, Aránzazu Rosado
  last_name: Diez
- first_name: Lorena
  full_name: Espinar, Lorena
  last_name: Espinar
- first_name: Albert Torelló
  full_name: Pérez, Albert Torelló
  last_name: Pérez
- first_name: Guillaume J.
  full_name: Filion, Guillaume J.
  last_name: Filion
citation:
  ama: Pokusaeva V, Diez AR, Espinar L, Pérez AT, Filion GJ. Strand asymmetry influences
    mismatch resolution during single-strand annealing. <i>Genome Biology</i>. 2022;23.
    doi:<a href="https://doi.org/10.1186/s13059-022-02665-3">10.1186/s13059-022-02665-3</a>
  apa: Pokusaeva, V., Diez, A. R., Espinar, L., Pérez, A. T., &#38; Filion, G. J.
    (2022). Strand asymmetry influences mismatch resolution during single-strand annealing.
    <i>Genome Biology</i>. Springer Nature. <a href="https://doi.org/10.1186/s13059-022-02665-3">https://doi.org/10.1186/s13059-022-02665-3</a>
  chicago: Pokusaeva, Victoria, Aránzazu Rosado Diez, Lorena Espinar, Albert Torelló
    Pérez, and Guillaume J. Filion. “Strand Asymmetry Influences Mismatch Resolution
    during Single-Strand Annealing.” <i>Genome Biology</i>. Springer Nature, 2022.
    <a href="https://doi.org/10.1186/s13059-022-02665-3">https://doi.org/10.1186/s13059-022-02665-3</a>.
  ieee: V. Pokusaeva, A. R. Diez, L. Espinar, A. T. Pérez, and G. J. Filion, “Strand
    asymmetry influences mismatch resolution during single-strand annealing,” <i>Genome
    Biology</i>, vol. 23. Springer Nature, 2022.
  ista: Pokusaeva V, Diez AR, Espinar L, Pérez AT, Filion GJ. 2022. Strand asymmetry
    influences mismatch resolution during single-strand annealing. Genome Biology.
    23, 93.
  mla: Pokusaeva, Victoria, et al. “Strand Asymmetry Influences Mismatch Resolution
    during Single-Strand Annealing.” <i>Genome Biology</i>, vol. 23, 93, Springer
    Nature, 2022, doi:<a href="https://doi.org/10.1186/s13059-022-02665-3">10.1186/s13059-022-02665-3</a>.
  short: V. Pokusaeva, A.R. Diez, L. Espinar, A.T. Pérez, G.J. Filion, Genome Biology
    23 (2022).
date_created: 2023-01-16T09:48:44Z
date_published: 2022-04-12T00:00:00Z
date_updated: 2025-03-31T16:01:11Z
day: '12'
ddc:
- '570'
department:
- _id: MaJö
doi: 10.1186/s13059-022-02665-3
ec_funded: 1
external_id:
  isi:
  - '000781953800001'
  pmid:
  - '35414014'
file:
- access_level: open_access
  checksum: 17bb091fec04d82ba20a3458c4cfd2bd
  content_type: application/pdf
  creator: dernst
  date_created: 2023-01-27T09:01:40Z
  date_updated: 2023-01-27T09:01:40Z
  file_id: '12419'
  file_name: 2022_GenomeBiology_Pokusaeva.pdf
  file_size: 4939342
  relation: main_file
  success: 1
file_date_updated: 2023-01-27T09:01:40Z
has_accepted_license: '1'
intvolume: '        23'
isi: 1
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 2564DBCA-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '665385'
  name: International IST Doctoral Program
publication: Genome Biology
publication_identifier:
  issn:
  - 1474-760X
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
  link:
  - relation: software
    url: 'https://github.com/cellcomplexitylab/strand_asymmetry '
  - relation: software
    url: https://hub.docker.com/r/gui11aume/strand_asymmetry
scopus_import: '1'
status: public
title: Strand asymmetry influences mismatch resolution during single-strand annealing
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 23
year: '2022'
...
---
_id: '12227'
abstract:
- lang: eng
  text: Polydicyclopentadiene (pDCPD), a thermoset with excellent mechanical properties,
    has enormous potential as a lightweight, tough, and stable matrix material owing
    to its highly cross-linked macromolecular network. This work describes generating
    pDCPD-based foams and hierarchically porous carbons derived therefrom by combining
    ring-opening metathesis polymerization (ROMP) of DCPD, high internal phase emulsions
    (HIPEs) as structural templates, and subsequent carbonization. The structure and
    function of the carbon foams were characterized and discussed in detail using
    scanning electron, transmission electron, or atomic force microscopy (SEM, TEM,
    AFM), electron energy-loss spectroscopy (TEM-EELS), N2 sorption, and analyses
    of electrical conductivity as well as mechanical properties. The resulting materials
    exhibited uniform, shape-retaining shrinkage of only ∼1/3 after carbonization.
    No structural failure was observed even when the pDCPD precursor foams were heated
    to 1400 °C. Instead, the high porosity, void size, and 3D interconnectivity were
    fully preserved, and the void diameters could be adjusted between 87 and 2.5 μm.
    Moreover, foams have a carbon content >97%, an electronic conductivity of up to
    2800 S·m–1, a Young’s modulus of up to 2.1 GPa, and a specific surface area of
    up to 1200 m2·g–1. Surprisingly, the pDCPD foams were carbonized into shapes other
    than monoliths, such as 10’s of micron thick membranes or foamy coatings adhered
    to a metal foil or grid substrate. The latter coatings even adhere upon bending.
    Finally, as a use case, carbonized foams were applied as porous cathodes for Li–O2
    batteries where the foams show a favorable combination of porosity, active surface
    area, and pore size for outstanding capacity.
acknowledgement: S.K. acknowledges the financial support from the Slovenian Research
  Agency (grants P1-0021, P2-0150). Support by Graz University of Technology (LP-03
  – Porous Materials@Work) and from VARTA Innovation GmbH is kindly acknowledged.
  We thank Umicore for providing the initiator and Matjaž Mazaj (National Institute
  of Chemistry, Ljubljana) and Karel Jerabek (Czech Academy of Sciences) for measurements
  and fruitful discussions. S.A.F. is indebted to the Austrian Federal Ministry of
  Science, Research and Economy; the Austrian Research Promotion Agency (Grant No.
  845364); and ISTA for support.
article_processing_charge: No
article_type: original
author:
- first_name: Sebastijan
  full_name: Kovačič, Sebastijan
  last_name: Kovačič
- first_name: Bettina
  full_name: Schafzahl, Bettina
  last_name: Schafzahl
- first_name: Nadejda B.
  full_name: Matsko, Nadejda B.
  last_name: Matsko
- first_name: Katharina
  full_name: Gruber, Katharina
  last_name: Gruber
- first_name: Martin
  full_name: Schmuck, Martin
  last_name: Schmuck
- first_name: Stefan
  full_name: Koller, Stefan
  last_name: Koller
- first_name: Stefan Alexander
  full_name: Freunberger, Stefan Alexander
  id: A8CA28E6-CE23-11E9-AD2D-EC27E6697425
  last_name: Freunberger
  orcid: 0000-0003-2902-5319
- first_name: Christian
  full_name: Slugovc, Christian
  last_name: Slugovc
citation:
  ama: 'Kovačič S, Schafzahl B, Matsko NB, et al. Carbon foams via ring-opening metathesis
    polymerization of emulsion templates: A facile method to make carbon current collectors
    for battery applications. <i>ACS Applied Energy Materials</i>. 2022;5(11):14381-14390.
    doi:<a href="https://doi.org/10.1021/acsaem.2c02787">10.1021/acsaem.2c02787</a>'
  apa: 'Kovačič, S., Schafzahl, B., Matsko, N. B., Gruber, K., Schmuck, M., Koller,
    S., … Slugovc, C. (2022). Carbon foams via ring-opening metathesis polymerization
    of emulsion templates: A facile method to make carbon current collectors for battery
    applications. <i>ACS Applied Energy Materials</i>. American Chemical Society.
    <a href="https://doi.org/10.1021/acsaem.2c02787">https://doi.org/10.1021/acsaem.2c02787</a>'
  chicago: 'Kovačič, Sebastijan, Bettina Schafzahl, Nadejda B. Matsko, Katharina Gruber,
    Martin Schmuck, Stefan Koller, Stefan Alexander Freunberger, and Christian Slugovc.
    “Carbon Foams via Ring-Opening Metathesis Polymerization of Emulsion Templates:
    A Facile Method to Make Carbon Current Collectors for Battery Applications.” <i>ACS
    Applied Energy Materials</i>. American Chemical Society, 2022. <a href="https://doi.org/10.1021/acsaem.2c02787">https://doi.org/10.1021/acsaem.2c02787</a>.'
  ieee: 'S. Kovačič <i>et al.</i>, “Carbon foams via ring-opening metathesis polymerization
    of emulsion templates: A facile method to make carbon current collectors for battery
    applications,” <i>ACS Applied Energy Materials</i>, vol. 5, no. 11. American Chemical
    Society, pp. 14381–14390, 2022.'
  ista: 'Kovačič S, Schafzahl B, Matsko NB, Gruber K, Schmuck M, Koller S, Freunberger
    SA, Slugovc C. 2022. Carbon foams via ring-opening metathesis polymerization of
    emulsion templates: A facile method to make carbon current collectors for battery
    applications. ACS Applied Energy Materials. 5(11), 14381–14390.'
  mla: 'Kovačič, Sebastijan, et al. “Carbon Foams via Ring-Opening Metathesis Polymerization
    of Emulsion Templates: A Facile Method to Make Carbon Current Collectors for Battery
    Applications.” <i>ACS Applied Energy Materials</i>, vol. 5, no. 11, American Chemical
    Society, 2022, pp. 14381–90, doi:<a href="https://doi.org/10.1021/acsaem.2c02787">10.1021/acsaem.2c02787</a>.'
  short: S. Kovačič, B. Schafzahl, N.B. Matsko, K. Gruber, M. Schmuck, S. Koller,
    S.A. Freunberger, C. Slugovc, ACS Applied Energy Materials 5 (2022) 14381–14390.
corr_author: '1'
date_created: 2023-01-16T09:48:53Z
date_published: 2022-10-16T00:00:00Z
date_updated: 2024-10-09T21:03:48Z
day: '16'
ddc:
- '540'
department:
- _id: StFr
doi: 10.1021/acsaem.2c02787
external_id:
  isi:
  - '000875635900001'
file:
- access_level: open_access
  checksum: 572d15c250ab83d44f4e2c3aeb5f7388
  content_type: application/pdf
  creator: dernst
  date_created: 2023-01-27T09:09:15Z
  date_updated: 2023-01-27T09:09:15Z
  file_id: '12420'
  file_name: 2022_AppliedEnergyMaterials_Kovacic.pdf
  file_size: 13105589
  relation: main_file
  success: 1
file_date_updated: 2023-01-27T09:09:15Z
has_accepted_license: '1'
intvolume: '         5'
isi: 1
issue: '11'
keyword:
- Electrical and Electronic Engineering
- Materials Chemistry
- Electrochemistry
- Energy Engineering and Power Technology
- Chemical Engineering (miscellaneous)
language:
- iso: eng
month: '10'
oa: 1
oa_version: Published Version
page: 14381-14390
publication: ACS Applied Energy Materials
publication_identifier:
  issn:
  - 2574-0962
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Carbon foams via ring-opening metathesis polymerization of emulsion templates:
  A facile method to make carbon current collectors for battery applications'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 5
year: '2022'
...
---
_id: '12233'
abstract:
- lang: eng
  text: A novel recursive list decoding (RLD) algorithm for Reed-Muller (RM) codes
    based on successive permutations (SP) of the codeword is presented. A low-complexity
    SP scheme applied to a subset of the symmetry group of RM codes is first proposed
    to carefully select a good codeword permutation on the fly. Then, the proposed
    SP technique is integrated into an improved RLD algorithm that initializes different
    decoding paths with random codeword permutations, which are sampled from the full
    symmetry group of RM codes. Finally, efficient latency and complexity reduction
    schemes are introduced that virtually preserve the error-correction performance
    of the proposed decoder. Simulation results demonstrate that at the target frame
    error rate of 10−3 for the RM code of length 256 with 163 information bits, the
    proposed decoder reduces 6% of the computational complexity and 22% of the decoding
    latency of the state-of-the-art semi-parallel simplified successive-cancellation
    decoder with fast Hadamard transform (SSC-FHT) that uses 96 permutations from
    the full symmetry group of RM codes, while relatively maintaining the error-correction
    performance and memory consumption of the semi-parallel permuted SSC-FHT decoder.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Nghia
  full_name: Doan, Nghia
  last_name: Doan
- first_name: Seyyed Ali
  full_name: Hashemi, Seyyed Ali
  last_name: Hashemi
- first_name: Marco
  full_name: Mondelli, Marco
  id: 27EB676C-8706-11E9-9510-7717E6697425
  last_name: Mondelli
  orcid: 0000-0002-3242-7020
- first_name: Warren J.
  full_name: Gross, Warren J.
  last_name: Gross
citation:
  ama: Doan N, Hashemi SA, Mondelli M, Gross WJ. Decoding Reed-Muller codes with successive
    codeword permutations. <i>IEEE Transactions on Communications</i>. 2022;70(11):7134-7145.
    doi:<a href="https://doi.org/10.1109/tcomm.2022.3211101">10.1109/tcomm.2022.3211101</a>
  apa: Doan, N., Hashemi, S. A., Mondelli, M., &#38; Gross, W. J. (2022). Decoding
    Reed-Muller codes with successive codeword permutations. <i>IEEE Transactions
    on Communications</i>. Institute of Electrical and Electronics Engineers. <a href="https://doi.org/10.1109/tcomm.2022.3211101">https://doi.org/10.1109/tcomm.2022.3211101</a>
  chicago: Doan, Nghia, Seyyed Ali Hashemi, Marco Mondelli, and Warren J. Gross. “Decoding
    Reed-Muller Codes with Successive Codeword Permutations.” <i>IEEE Transactions
    on Communications</i>. Institute of Electrical and Electronics Engineers, 2022.
    <a href="https://doi.org/10.1109/tcomm.2022.3211101">https://doi.org/10.1109/tcomm.2022.3211101</a>.
  ieee: N. Doan, S. A. Hashemi, M. Mondelli, and W. J. Gross, “Decoding Reed-Muller
    codes with successive codeword permutations,” <i>IEEE Transactions on Communications</i>,
    vol. 70, no. 11. Institute of Electrical and Electronics Engineers, pp. 7134–7145,
    2022.
  ista: Doan N, Hashemi SA, Mondelli M, Gross WJ. 2022. Decoding Reed-Muller codes
    with successive codeword permutations. IEEE Transactions on Communications. 70(11),
    7134–7145.
  mla: Doan, Nghia, et al. “Decoding Reed-Muller Codes with Successive Codeword Permutations.”
    <i>IEEE Transactions on Communications</i>, vol. 70, no. 11, Institute of Electrical
    and Electronics Engineers, 2022, pp. 7134–45, doi:<a href="https://doi.org/10.1109/tcomm.2022.3211101">10.1109/tcomm.2022.3211101</a>.
  short: N. Doan, S.A. Hashemi, M. Mondelli, W.J. Gross, IEEE Transactions on Communications
    70 (2022) 7134–7145.
date_created: 2023-01-16T09:50:38Z
date_published: 2022-11-01T00:00:00Z
date_updated: 2023-08-04T09:34:43Z
day: '01'
department:
- _id: MaMo
doi: 10.1109/tcomm.2022.3211101
external_id:
  arxiv:
  - '2109.02122'
  isi:
  - '000937284600006'
intvolume: '        70'
isi: 1
issue: '11'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: ' https://doi.org/10.48550/arXiv.2109.02122'
month: '11'
oa: 1
oa_version: Preprint
page: 7134-7145
publication: IEEE Transactions on Communications
publication_identifier:
  eissn:
  - 1558-0857
  issn:
  - 0090-6778
publication_status: published
publisher: Institute of Electrical and Electronics Engineers
quality_controlled: '1'
scopus_import: '1'
status: public
title: Decoding Reed-Muller codes with successive codeword permutations
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 70
year: '2022'
...
---
_id: '12298'
abstract:
- lang: eng
  text: 'Existing committee-based Byzantine state machine replication (SMR) protocols,
    typically deployed in production blockchains, face a clear trade-off: (1) they
    either achieve linear communication cost in the steady state, but sacrifice liveness
    during periods of asynchrony, or (2) they are robust (progress with probability
    one) but pay quadratic communication cost. We believe this trade-off is unwarranted
    since existing linear protocols still have asymptotic quadratic cost in the worst
    case. We design Ditto, a Byzantine SMR protocol that enjoys the best of both worlds:
    optimal communication on and off the steady state (linear and quadratic, respectively)
    and progress guarantee under asynchrony and DDoS attacks. We achieve this by replacing
    the view-synchronization of partially synchronous protocols with an asynchronous
    fallback mechanism at no extra asymptotic cost. Specifically, we start from HotStuff,
    a state-of-the-art linear protocol, and gradually build Ditto. As a separate contribution
    and an intermediate step, we design a 2-chain version of HotStuff, Jolteon, which
    leverages a quadratic view-change mechanism to reduce the latency of the standard
    3-chain HotStuff. We implement and experimentally evaluate all our systems to
    prove that breaking the robustness-efficiency trade-off is in the realm of practicality.'
acknowledgement: We thank our shepherd Aniket Kate and the anonymous reviewers at
  FC 2022 for their helpful feedback. This work is supported by the Novi team at Facebook.
  We also thank the Novi Research and Engineering teams for valuable feedback, and
  in particular Mathieu Baudet, Andrey Chursin, George Danezis, Zekun Li, and Dahlia
  Malkhi for discussions that shaped this work.
alternative_title:
- LNCS
article_processing_charge: No
arxiv: 1
author:
- first_name: Rati
  full_name: Gelashvili, Rati
  last_name: Gelashvili
- first_name: Eleftherios
  full_name: Kokoris Kogias, Eleftherios
  id: f5983044-d7ef-11ea-ac6d-fd1430a26d30
  last_name: Kokoris Kogias
- first_name: Alberto
  full_name: Sonnino, Alberto
  last_name: Sonnino
- first_name: Alexander
  full_name: Spiegelman, Alexander
  last_name: Spiegelman
- first_name: Zhuolun
  full_name: Xiang, Zhuolun
  last_name: Xiang
citation:
  ama: 'Gelashvili R, Kokoris Kogias E, Sonnino A, Spiegelman A, Xiang Z. Jolteon
    and ditto: Network-adaptive efficient consensus with asynchronous fallback. In:
    <i>Financial Cryptography and Data Security</i>. Vol 13411. Springer Nature; 2022:296-315.
    doi:<a href="https://doi.org/10.1007/978-3-031-18283-9_14">10.1007/978-3-031-18283-9_14</a>'
  apa: 'Gelashvili, R., Kokoris Kogias, E., Sonnino, A., Spiegelman, A., &#38; Xiang,
    Z. (2022). Jolteon and ditto: Network-adaptive efficient consensus with asynchronous
    fallback. In <i>Financial Cryptography and Data Security</i> (Vol. 13411, pp.
    296–315). Radisson Grenada Beach Resort, Grenada: Springer Nature. <a href="https://doi.org/10.1007/978-3-031-18283-9_14">https://doi.org/10.1007/978-3-031-18283-9_14</a>'
  chicago: 'Gelashvili, Rati, Eleftherios Kokoris Kogias, Alberto Sonnino, Alexander
    Spiegelman, and Zhuolun Xiang. “Jolteon and Ditto: Network-Adaptive Efficient
    Consensus with Asynchronous Fallback.” In <i>Financial Cryptography and Data Security</i>,
    13411:296–315. Springer Nature, 2022. <a href="https://doi.org/10.1007/978-3-031-18283-9_14">https://doi.org/10.1007/978-3-031-18283-9_14</a>.'
  ieee: 'R. Gelashvili, E. Kokoris Kogias, A. Sonnino, A. Spiegelman, and Z. Xiang,
    “Jolteon and ditto: Network-adaptive efficient consensus with asynchronous fallback,”
    in <i>Financial Cryptography and Data Security</i>, Radisson Grenada Beach Resort,
    Grenada, 2022, vol. 13411, pp. 296–315.'
  ista: 'Gelashvili R, Kokoris Kogias E, Sonnino A, Spiegelman A, Xiang Z. 2022. Jolteon
    and ditto: Network-adaptive efficient consensus with asynchronous fallback. Financial
    Cryptography and Data Security. FC: Financial Cryptography, LNCS, vol. 13411,
    296–315.'
  mla: 'Gelashvili, Rati, et al. “Jolteon and Ditto: Network-Adaptive Efficient Consensus
    with Asynchronous Fallback.” <i>Financial Cryptography and Data Security</i>,
    vol. 13411, Springer Nature, 2022, pp. 296–315, doi:<a href="https://doi.org/10.1007/978-3-031-18283-9_14">10.1007/978-3-031-18283-9_14</a>.'
  short: R. Gelashvili, E. Kokoris Kogias, A. Sonnino, A. Spiegelman, Z. Xiang, in:,
    Financial Cryptography and Data Security, Springer Nature, 2022, pp. 296–315.
conference:
  end_date: 2022-05-06
  location: Radisson Grenada Beach Resort, Grenada
  name: 'FC: Financial Cryptography'
  start_date: 2022-05-02
date_created: 2023-01-16T10:05:51Z
date_published: 2022-10-22T00:00:00Z
date_updated: 2025-09-10T09:52:23Z
day: '22'
department:
- _id: ElKo
doi: 10.1007/978-3-031-18283-9_14
external_id:
  arxiv:
  - '2106.10362'
  isi:
  - '001423640200014'
intvolume: '     13411'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: ' https://doi.org/10.48550/arXiv.2106.10362'
month: '10'
oa: 1
oa_version: Preprint
page: 296-315
publication: Financial Cryptography and Data Security
publication_identifier:
  eisbn:
  - '9783031182839'
  eissn:
  - 1611-3349
  isbn:
  - '9783031182822'
  issn:
  - 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Jolteon and ditto: Network-adaptive efficient consensus with asynchronous
  fallback'
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 13411
year: '2022'
...
---
_id: '12300'
abstract:
- lang: eng
  text: Distributed Key Generation (DKG) is a technique to bootstrap threshold cryptosystems
    without a trusted third party and is a building block to decentralized protocols
    such as randomness beacons, threshold signatures, and general multiparty computation.
    Until recently, DKG protocols have assumed the synchronous model and thus are
    vulnerable when their underlying network assumptions do not hold. The recent advancements
    in asynchronous DKG protocols are insufficient as they either have poor efficiency
    or limited functionality, resulting in a lack of concrete implementations. In
    this paper, we present a simple and concretely efficient asynchronous DKG (ADKG)
    protocol. In a network of n nodes, our ADKG protocol can tolerate up to t<n/3
    malicious nodes and have an expected O(κn3) communication cost, where κ is the
    security parameter. Our ADKG protocol produces a field element as the secret and
    is thus compatible with off-the-shelf threshold cryptosystems. We implement our
    ADKG protocol and evaluate it using a network of up to 128 nodes in geographically
    distributed AWS instances. Our evaluation shows that our protocol takes as low
    as 3 and 9.5 seconds to terminate for 32 and 64 nodes, respectively. Also, each
    node sends only 0.7 Megabytes and 2.9 Megabytes of data during the two experiments,
    respectively.
acknowledgement: "The authors would like to thank Amit Agarwal, Adithya Bhat, Kobi
  Gurkan, Dakshita Khurana, Nibesh Shrestha, and Gilad Stern for the helpful discussions
  related to the paper.\r\nAlso, the authors would like to thank Sylvain Bellemare
  for helping with the hbACSS codebase and Nicolas Gailly for helping with running
  the Drand experiments."
article_processing_charge: No
author:
- first_name: Sourav
  full_name: Das, Sourav
  last_name: Das
- first_name: Thomas
  full_name: Yurek, Thomas
  last_name: Yurek
- first_name: Zhuolun
  full_name: Xiang, Zhuolun
  last_name: Xiang
- first_name: Andrew
  full_name: Miller, Andrew
  last_name: Miller
- first_name: Eleftherios
  full_name: Kokoris Kogias, Eleftherios
  id: f5983044-d7ef-11ea-ac6d-fd1430a26d30
  last_name: Kokoris Kogias
- first_name: Ling
  full_name: Ren, Ling
  last_name: Ren
citation:
  ama: 'Das S, Yurek T, Xiang Z, Miller A, Kokoris Kogias E, Ren L. Practical asynchronous
    distributed key generation. In: <i>2022 IEEE Symposium on Security and Privacy</i>.
    Institute of Electrical and Electronics Engineers; 2022:2518-2534. doi:<a href="https://doi.org/10.1109/sp46214.2022.9833584">10.1109/sp46214.2022.9833584</a>'
  apa: 'Das, S., Yurek, T., Xiang, Z., Miller, A., Kokoris Kogias, E., &#38; Ren,
    L. (2022). Practical asynchronous distributed key generation. In <i>2022 IEEE
    Symposium on Security and Privacy</i> (pp. 2518–2534). San Francisco, CA, United
    States: Institute of Electrical and Electronics Engineers. <a href="https://doi.org/10.1109/sp46214.2022.9833584">https://doi.org/10.1109/sp46214.2022.9833584</a>'
  chicago: Das, Sourav, Thomas Yurek, Zhuolun Xiang, Andrew Miller, Eleftherios Kokoris
    Kogias, and Ling Ren. “Practical Asynchronous Distributed Key Generation.” In
    <i>2022 IEEE Symposium on Security and Privacy</i>, 2518–34. Institute of Electrical
    and Electronics Engineers, 2022. <a href="https://doi.org/10.1109/sp46214.2022.9833584">https://doi.org/10.1109/sp46214.2022.9833584</a>.
  ieee: S. Das, T. Yurek, Z. Xiang, A. Miller, E. Kokoris Kogias, and L. Ren, “Practical
    asynchronous distributed key generation,” in <i>2022 IEEE Symposium on Security
    and Privacy</i>, San Francisco, CA, United States, 2022, pp. 2518–2534.
  ista: 'Das S, Yurek T, Xiang Z, Miller A, Kokoris Kogias E, Ren L. 2022. Practical
    asynchronous distributed key generation. 2022 IEEE Symposium on Security and Privacy.
    SP: Symposium on Security and Privacy, 2518–2534.'
  mla: Das, Sourav, et al. “Practical Asynchronous Distributed Key Generation.” <i>2022
    IEEE Symposium on Security and Privacy</i>, Institute of Electrical and Electronics
    Engineers, 2022, pp. 2518–34, doi:<a href="https://doi.org/10.1109/sp46214.2022.9833584">10.1109/sp46214.2022.9833584</a>.
  short: S. Das, T. Yurek, Z. Xiang, A. Miller, E. Kokoris Kogias, L. Ren, in:, 2022
    IEEE Symposium on Security and Privacy, Institute of Electrical and Electronics
    Engineers, 2022, pp. 2518–2534.
conference:
  end_date: 2022-05-26
  location: San Francisco, CA, United States
  name: 'SP: Symposium on Security and Privacy'
  start_date: 2022-05-23
date_created: 2023-01-16T10:06:11Z
date_published: 2022-07-27T00:00:00Z
date_updated: 2023-02-16T07:43:53Z
day: '27'
department:
- _id: ElKo
doi: 10.1109/sp46214.2022.9833584
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://eprint.iacr.org/2021/1591
month: '07'
oa: 1
oa_version: Preprint
page: 2518-2534
publication: 2022 IEEE Symposium on Security and Privacy
publication_identifier:
  eisbn:
  - '9781665413169'
  eissn:
  - 2375-1207
publication_status: published
publisher: Institute of Electrical and Electronics Engineers
quality_controlled: '1'
scopus_import: '1'
status: public
title: Practical asynchronous distributed key generation
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2022'
...
---
_id: '12302'
abstract:
- lang: eng
  text: 'We propose a novel algorithm to decide the language inclusion between (nondeterministic)
    Büchi automata, a PSPACE-complete problem. Our approach, like others before, leverage
    a notion of quasiorder to prune the search for a counterexample by discarding
    candidates which are subsumed by others for the quasiorder. Discarded candidates
    are guaranteed to not compromise the completeness of the algorithm. The novelty
    of our work lies in the quasiorder used to discard candidates. We introduce FORQs
    (family of right quasiorders) that we obtain by adapting the notion of family
    of right congruences put forward by Maler and Staiger in 1993. We define a FORQ-based
    inclusion algorithm which we prove correct and instantiate it for a specific FORQ,
    called the structural FORQ, induced by the Büchi automaton to the right of the
    inclusion sign. The resulting implementation, called FORKLIFT, scales up better
    than the state-of-the-art on a variety of benchmarks including benchmarks from
    program verification and theorem proving for word combinatorics. Artifact: https://doi.org/10.5281/zenodo.6552870'
acknowledgement: This work was partially funded by the ESF Investing in your future,
  the Madrid regional project S2018/TCS-4339 BLOQUES, the Spanish project PGC2018-102210-B-I00
  BOSCO, the Ramón y Cajal fellowship RYC-2016-20281, and the ERC grant PR1001ERC02.
alternative_title:
- LNCS
article_processing_charge: No
arxiv: 1
author:
- first_name: Kyveli
  full_name: Doveri, Kyveli
  last_name: Doveri
- first_name: Pierre
  full_name: Ganty, Pierre
  last_name: Ganty
- first_name: Nicolas Adrien
  full_name: Mazzocchi, Nicolas Adrien
  id: b26baa86-3308-11ec-87b0-8990f34baa85
  last_name: Mazzocchi
citation:
  ama: 'Doveri K, Ganty P, Mazzocchi NA. FORQ-based language inclusion formal testing.
    In: <i>Computer Aided Verification</i>. Vol 13372. Springer Nature; 2022:109-129.
    doi:<a href="https://doi.org/10.1007/978-3-031-13188-2_6">10.1007/978-3-031-13188-2_6</a>'
  apa: 'Doveri, K., Ganty, P., &#38; Mazzocchi, N. A. (2022). FORQ-based language
    inclusion formal testing. In <i>Computer Aided Verification</i> (Vol. 13372, pp.
    109–129). Haifa, Israel: Springer Nature. <a href="https://doi.org/10.1007/978-3-031-13188-2_6">https://doi.org/10.1007/978-3-031-13188-2_6</a>'
  chicago: Doveri, Kyveli, Pierre Ganty, and Nicolas Adrien Mazzocchi. “FORQ-Based
    Language Inclusion Formal Testing.” In <i>Computer Aided Verification</i>, 13372:109–29.
    Springer Nature, 2022. <a href="https://doi.org/10.1007/978-3-031-13188-2_6">https://doi.org/10.1007/978-3-031-13188-2_6</a>.
  ieee: K. Doveri, P. Ganty, and N. A. Mazzocchi, “FORQ-based language inclusion formal
    testing,” in <i>Computer Aided Verification</i>, Haifa, Israel, 2022, vol. 13372,
    pp. 109–129.
  ista: 'Doveri K, Ganty P, Mazzocchi NA. 2022. FORQ-based language inclusion formal
    testing. Computer Aided Verification. CAV: Computer Aided Verification, LNCS,
    vol. 13372, 109–129.'
  mla: Doveri, Kyveli, et al. “FORQ-Based Language Inclusion Formal Testing.” <i>Computer
    Aided Verification</i>, vol. 13372, Springer Nature, 2022, pp. 109–29, doi:<a
    href="https://doi.org/10.1007/978-3-031-13188-2_6">10.1007/978-3-031-13188-2_6</a>.
  short: K. Doveri, P. Ganty, N.A. Mazzocchi, in:, Computer Aided Verification, Springer
    Nature, 2022, pp. 109–129.
conference:
  end_date: 2022-08-10
  location: Haifa, Israel
  name: 'CAV: Computer Aided Verification'
  start_date: 2022-08-07
date_created: 2023-01-16T10:06:31Z
date_published: 2022-08-06T00:00:00Z
date_updated: 2025-04-14T07:55:56Z
day: '06'
ddc:
- '000'
department:
- _id: ToHe
doi: 10.1007/978-3-031-13188-2_6
ec_funded: 1
external_id:
  arxiv:
  - '2207.13549'
  isi:
  - '000870310500006'
file:
- access_level: open_access
  checksum: edc363b1be5447a09063e115c247918a
  content_type: application/pdf
  creator: dernst
  date_created: 2023-01-30T12:51:02Z
  date_updated: 2023-01-30T12:51:02Z
  file_id: '12465'
  file_name: 2022_LNCS_Doveri.pdf
  file_size: 497682
  relation: main_file
  success: 1
file_date_updated: 2023-01-30T12:51:02Z
has_accepted_license: '1'
intvolume: '     13372'
isi: 1
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
page: 109-129
project:
- _id: 62781420-2b32-11ec-9570-8d9b63373d4d
  call_identifier: H2020
  grant_number: '101020093'
  name: Vigilant Algorithmic Monitoring of Software
publication: Computer Aided Verification
publication_identifier:
  eisbn:
  - '9783031131882'
  eissn:
  - 1611-3349
  isbn:
  - '9783031131875'
  issn:
  - 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: FORQ-based language inclusion formal testing
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: conference
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 13372
year: '2022'
...
---
_id: '12303'
abstract:
- lang: eng
  text: We construct for each choice of a quiver Q, a cohomology theory A, and a poset
    P a “loop Grassmannian” GP(Q,A). This generalizes loop Grassmannians of semisimple
    groups and the loop Grassmannians of based quadratic forms. The addition of a
    “dilation” torus D⊆G2m gives a quantization GPD(Q,A). This construction is motivated
    by the program of introducing an inner cohomology theory in algebraic geometry
    adequate for the Geometric Langlands program (Mirković, Some extensions of the
    notion of loop Grassmannians. Rad Hrvat. Akad. Znan. Umjet. Mat. Znan., the Mardešić
    issue. No. 532, 53–74, 2017) and on the construction of affine quantum groups
    from generalized cohomology theories (Yang and Zhao, Quiver varieties and elliptic
    quantum groups, preprint. arxiv1708.01418).
acknowledgement: I.M. thanks Zhijie Dong for long-term discussions on the material
  that entered this work. We thank Misha Finkelberg for pointing out errors in earlier
  versions. His advice and his insistence have led to a much better paper. A part
  of the writing was done at the conference at IST (Vienna) attended by all coauthors.
  We therefore thank the organizers of the conference and the support of ERC Advanced
  Grant Arithmetic and Physics of Higgs moduli spaces No. 320593. The work of I.M.
  was partially supported by NSF grants. The work of Y.Y. was partially supported
  by the Australian Research Council (ARC) via the award DE190101231. The work of
  G.Z. was partially supported by ARC via the award DE190101222.
alternative_title:
- Trends in Mathematics
article_processing_charge: No
arxiv: 1
author:
- first_name: Ivan
  full_name: Mirković, Ivan
  last_name: Mirković
- first_name: Yaping
  full_name: Yang, Yaping
  last_name: Yang
- first_name: Gufang
  full_name: Zhao, Gufang
  id: 2BC2AC5E-F248-11E8-B48F-1D18A9856A87
  last_name: Zhao
citation:
  ama: 'Mirković I, Yang Y, Zhao G. Loop Grassmannians of Quivers and Affine Quantum
    Groups. In: Baranovskky V, Guay N, Schedler T, eds. <i>Representation Theory and
    Algebraic Geometry</i>. 1st ed. TM. Cham: Springer Nature; Birkhäuser; 2022:347-392.
    doi:<a href="https://doi.org/10.1007/978-3-030-82007-7_8">10.1007/978-3-030-82007-7_8</a>'
  apa: 'Mirković, I., Yang, Y., &#38; Zhao, G. (2022). Loop Grassmannians of Quivers
    and Affine Quantum Groups. In V. Baranovskky, N. Guay, &#38; T. Schedler (Eds.),
    <i>Representation Theory and Algebraic Geometry</i> (1st ed., pp. 347–392). Cham:
    Springer Nature; Birkhäuser. <a href="https://doi.org/10.1007/978-3-030-82007-7_8">https://doi.org/10.1007/978-3-030-82007-7_8</a>'
  chicago: 'Mirković, Ivan, Yaping Yang, and Gufang Zhao. “Loop Grassmannians of Quivers
    and Affine Quantum Groups.” In <i>Representation Theory and Algebraic Geometry</i>,
    edited by Vladimir Baranovskky, Nicolas Guay, and Travis Schedler, 1st ed., 347–92.
    TM. Cham: Springer Nature; Birkhäuser, 2022. <a href="https://doi.org/10.1007/978-3-030-82007-7_8">https://doi.org/10.1007/978-3-030-82007-7_8</a>.'
  ieee: 'I. Mirković, Y. Yang, and G. Zhao, “Loop Grassmannians of Quivers and Affine
    Quantum Groups,” in <i>Representation Theory and Algebraic Geometry</i>, 1st ed.,
    V. Baranovskky, N. Guay, and T. Schedler, Eds. Cham: Springer Nature; Birkhäuser,
    2022, pp. 347–392.'
  ista: 'Mirković I, Yang Y, Zhao G. 2022.Loop Grassmannians of Quivers and Affine
    Quantum Groups. In: Representation Theory and Algebraic Geometry. Trends in Mathematics,
    , 347–392.'
  mla: Mirković, Ivan, et al. “Loop Grassmannians of Quivers and Affine Quantum Groups.”
    <i>Representation Theory and Algebraic Geometry</i>, edited by Vladimir Baranovskky
    et al., 1st ed., Springer Nature; Birkhäuser, 2022, pp. 347–92, doi:<a href="https://doi.org/10.1007/978-3-030-82007-7_8">10.1007/978-3-030-82007-7_8</a>.
  short: I. Mirković, Y. Yang, G. Zhao, in:, V. Baranovskky, N. Guay, T. Schedler
    (Eds.), Representation Theory and Algebraic Geometry, 1st ed., Springer Nature;
    Birkhäuser, Cham, 2022, pp. 347–392.
date_created: 2023-01-16T10:06:41Z
date_published: 2022-06-16T00:00:00Z
date_updated: 2025-04-14T09:12:46Z
day: '16'
department:
- _id: TaHa
doi: 10.1007/978-3-030-82007-7_8
ec_funded: 1
edition: '1'
editor:
- first_name: Vladimir
  full_name: Baranovskky, Vladimir
  last_name: Baranovskky
- first_name: Nicolas
  full_name: Guay, Nicolas
  last_name: Guay
- first_name: Travis
  full_name: Schedler, Travis
  last_name: Schedler
external_id:
  arxiv:
  - '1810.10095'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.1810.10095
month: '06'
oa: 1
oa_version: Preprint
page: 347-392
place: Cham
project:
- _id: 25E549F4-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '320593'
  name: Arithmetic and physics of Higgs moduli spaces
publication: Representation Theory and Algebraic Geometry
publication_identifier:
  eisbn:
  - '9783030820077'
  eissn:
  - 2297-024X
  isbn:
  - '9783030820060'
  issn:
  - 2297-0215
publication_status: published
publisher: Springer Nature; Birkhäuser
quality_controlled: '1'
scopus_import: '1'
series_title: TM
status: public
title: Loop Grassmannians of Quivers and Affine Quantum Groups
type: book_chapter
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2022'
...
---
OA_place: publisher
_id: '12358'
abstract:
- lang: eng
  text: "The complex yarn structure of knitted and woven fabrics gives rise to both
    a mechanical and\r\nvisual complexity. The small-scale interactions of yarns colliding
    with and pulling on each\r\nother result in drastically different large-scale
    stretching and bending behavior, introducing\r\nanisotropy, curling, and more.
    While simulating cloth as individual yarns can reproduce this\r\ncomplexity and
    match the quality of real fabric, it may be too computationally expensive for\r\nlarge
    fabrics. On the other hand, continuum-based approaches do not need to discretize
    the\r\ncloth at a stitch-level, but it is non-trivial to find a material model
    that would replicate the\r\nlarge-scale behavior of yarn fabrics, and they discard
    the intricate visual detail. In this thesis,\r\nwe discuss three methods to try
    and bridge the gap between small-scale and large-scale yarn\r\nmechanics using
    numerical homogenization: fitting a continuum model to periodic yarn simulations,
    adding mechanics-aware yarn detail onto thin-shell simulations, and quantitatively\r\nfitting
    yarn parameters to physical measurements of real fabric.\r\nTo start, we present
    a method for animating yarn-level cloth effects using a thin-shell solver.\r\nWe
    first use a large number of periodic yarn-level simulations to build a model of
    the potential\r\nenergy density of the cloth, and then use it to compute forces
    in a thin-shell simulator. The\r\nresulting simulations faithfully reproduce expected
    effects like the stiffening of woven fabrics\r\nand the highly deformable nature
    and anisotropy of knitted fabrics at a fraction of the cost of\r\nfull yarn-level
    simulation.\r\nWhile our thin-shell simulations are able to capture large-scale
    yarn mechanics, they lack\r\nthe rich visual detail of yarn-level simulations.
    Therefore, we propose a method to animate\r\nyarn-level cloth geometry on top
    of an underlying deforming mesh in a mechanics-aware\r\nfashion in real time.
    Using triangle strains to interpolate precomputed yarn geometry, we are\r\nable
    to reproduce effects such as knit loops tightening under stretching at negligible
    cost.\r\nFinally, we introduce a methodology for inverse-modeling of yarn-level
    mechanics of cloth,\r\nbased on the mechanical response of fabrics in the real
    world. We compile a database from\r\nphysical tests of several knitted fabrics
    used in the textile industry spanning diverse physical\r\nproperties like stiffness,
    nonlinearity, and anisotropy. We then develop a system for approximating these
    mechanical responses with yarn-level cloth simulation, using homogenized\r\nshell
    models to speed up computation and adding some small-but-necessary extensions
    to\r\nyarn-level models used in computer graphics.\r\n"
acknowledged_ssus:
- _id: SSU
alternative_title:
- ISTA Thesis
article_processing_charge: No
author:
- first_name: Georg
  full_name: Sperl, Georg
  id: 4DD40360-F248-11E8-B48F-1D18A9856A87
  last_name: Sperl
citation:
  ama: 'Sperl G. Homogenizing yarn simulations: Large-scale mechanics, small-scale
    detail, and quantitative fitting. 2022. doi:<a href="https://doi.org/10.15479/at:ista:12103">10.15479/at:ista:12103</a>'
  apa: 'Sperl, G. (2022). <i>Homogenizing yarn simulations: Large-scale mechanics,
    small-scale detail, and quantitative fitting</i>. Institute of Science and Technology
    Austria. <a href="https://doi.org/10.15479/at:ista:12103">https://doi.org/10.15479/at:ista:12103</a>'
  chicago: 'Sperl, Georg. “Homogenizing Yarn Simulations: Large-Scale Mechanics, Small-Scale
    Detail, and Quantitative Fitting.” Institute of Science and Technology Austria,
    2022. <a href="https://doi.org/10.15479/at:ista:12103">https://doi.org/10.15479/at:ista:12103</a>.'
  ieee: 'G. Sperl, “Homogenizing yarn simulations: Large-scale mechanics, small-scale
    detail, and quantitative fitting,” Institute of Science and Technology Austria,
    2022.'
  ista: 'Sperl G. 2022. Homogenizing yarn simulations: Large-scale mechanics, small-scale
    detail, and quantitative fitting. Institute of Science and Technology Austria.'
  mla: 'Sperl, Georg. <i>Homogenizing Yarn Simulations: Large-Scale Mechanics, Small-Scale
    Detail, and Quantitative Fitting</i>. Institute of Science and Technology Austria,
    2022, doi:<a href="https://doi.org/10.15479/at:ista:12103">10.15479/at:ista:12103</a>.'
  short: 'G. Sperl, Homogenizing Yarn Simulations: Large-Scale Mechanics, Small-Scale
    Detail, and Quantitative Fitting, Institute of Science and Technology Austria,
    2022.'
corr_author: '1'
date_created: 2023-01-24T10:49:46Z
date_published: 2022-09-22T00:00:00Z
date_updated: 2026-06-18T19:57:47Z
day: '22'
ddc:
- '000'
- '620'
degree_awarded: PhD
department:
- _id: GradSch
- _id: ChWo
doi: 10.15479/at:ista:12103
ec_funded: 1
file:
- access_level: open_access
  checksum: 083722acbb8115e52e3b0fdec6226769
  content_type: application/pdf
  creator: cchlebak
  date_created: 2023-01-25T12:04:41Z
  date_updated: 2023-02-02T09:29:57Z
  description: 'This is the main PDF file of the thesis. File size: 105 MB'
  file_id: '12371'
  file_name: thesis_gsperl.pdf
  file_size: 104497530
  relation: main_file
  title: Thesis
- access_level: open_access
  checksum: 511f82025e5fcb70bff4731d6896ca07
  content_type: application/pdf
  creator: cchlebak
  date_created: 2023-02-02T09:33:37Z
  date_updated: 2023-02-02T09:33:37Z
  description: This version of the thesis uses stronger image compression for a smaller
    file size of 23MB.
  file_id: '12483'
  file_name: thesis_gsperl_compressed.pdf
  file_size: 23183710
  relation: main_file
  title: Thesis (compressed 23MB)
- access_level: open_access
  checksum: ed4cb85225eedff761c25bddfc37a2ed
  content_type: application/x-zip-compressed
  creator: cchlebak
  date_created: 2023-02-02T09:39:25Z
  date_updated: 2023-02-02T09:39:25Z
  file_id: '12484'
  file_name: thesis-source.zip
  file_size: 98382247
  relation: source_file
file_date_updated: 2023-02-02T09:39:25Z
has_accepted_license: '1'
language:
- iso: eng
month: '09'
oa: 1
oa_version: Published Version
page: '138'
project:
- _id: 2533E772-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '638176'
  name: 'Big Splash: Efficient Simulation of Natural Phenomena at Extremely Large
    Scales'
publication_identifier:
  isbn:
  - 978-3-99078-020-6
  issn:
  - 2663-337X
publication_status: published
publisher: Institute of Science and Technology Austria
related_material:
  record:
  - id: '8385'
    relation: part_of_dissertation
    status: public
  - id: '11736'
    relation: part_of_dissertation
    status: public
  - id: '9818'
    relation: part_of_dissertation
    status: public
status: public
supervisor:
- first_name: Christopher J
  full_name: Wojtan, Christopher J
  id: 3C61F1D2-F248-11E8-B48F-1D18A9856A87
  last_name: Wojtan
  orcid: 0000-0001-6646-5546
title: 'Homogenizing yarn simulations: Large-scale mechanics, small-scale detail,
  and quantitative fitting'
type: dissertation
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
year: '2022'
...
---
OA_place: publisher
_id: '12368'
abstract:
- lang: eng
  text: "Metazoan development relies on the formation and remodeling of cell-cell
    contacts. The \r\nbinding of adhesion receptors and remodeling of the actomyosin
    cell cortex at cell-cell \r\ninteraction sites have been implicated in cell-cell
    contact formation. Yet, how these two \r\nprocesses functionally interact to drive
    cell-cell contact expansion and strengthening \r\nremains unclear. Here, we study
    how primary germ layer progenitor cells from zebrafish \r\nbind to supported lipid
    bilayers (SLB) functionalized with E-cadherin ectodomains as an \r\nassay system
    for monitoring cell-cell contact formation at high spatiotemporal resolution.
    \r\nWe show that cell-cell contact formation represents a two-tiered process:
    E-cadherin\x02mediated downregulation of the small GTPase RhoA at the forming
    contact leads to both \r\ndepletion of Myosin-2 and decrease of F-actin. This
    is followed by centrifugal actin \r\nnetwork flows at the contact triggered by
    a sharp gradient of Myosin-2 at the rim of the \r\ncontact zone, with Myosin-2
    displaying higher cortical localization outside than inside of \r\nthe contact.
    These centrifugal cortical actin flows, in turn, not only further dilute the actin
    \r\nnetwork at the contact disc, but also lead to an accumulation of both F-actin
    and E\x02cadherin at the contact rim. Eventually, this combination of actomyosin
    downregulation \r\nand flows at the contact contribute to the characteristic molecular
    organization implicated \r\nin contact formation and maintenance: depletion of
    cortical actomyosin at the contact disc, \r\ndriving contact expansion by lowering
    interfacial tension at the contact, and accumulation \r\nof both E-cadherin and
    F-actin at the contact rim, mechanically linking the contractile \r\ncortices
    of the adhering cells. Thus, using a biomimetic assay, we exemplify how \r\nadhesion
    signaling and cell mechanics function together to modulate the spatial \r\norganization
    of cell-cell contacts."
acknowledged_ssus:
- _id: LifeSc
- _id: Bio
- _id: NanoFab
alternative_title:
- ISTA Thesis
article_processing_charge: No
author:
- first_name: Feyza N
  full_name: Arslan, Feyza N
  id: 49DA7910-F248-11E8-B48F-1D18A9856A87
  last_name: Arslan
  orcid: 0000-0001-5809-9566
citation:
  ama: Arslan FN. Remodeling of E-cadherin-mediated contacts via cortical  flows.
    2022. doi:<a href="https://doi.org/10.15479/at:ista:12153">10.15479/at:ista:12153</a>
  apa: Arslan, F. N. (2022). <i>Remodeling of E-cadherin-mediated contacts via cortical 
    flows</i>. Institute of Science and Technology Austria. <a href="https://doi.org/10.15479/at:ista:12153">https://doi.org/10.15479/at:ista:12153</a>
  chicago: Arslan, Feyza N. “Remodeling of E-Cadherin-Mediated Contacts via Cortical 
    Flows.” Institute of Science and Technology Austria, 2022. <a href="https://doi.org/10.15479/at:ista:12153">https://doi.org/10.15479/at:ista:12153</a>.
  ieee: F. N. Arslan, “Remodeling of E-cadherin-mediated contacts via cortical  flows,”
    Institute of Science and Technology Austria, 2022.
  ista: Arslan FN. 2022. Remodeling of E-cadherin-mediated contacts via cortical 
    flows. Institute of Science and Technology Austria.
  mla: Arslan, Feyza N. <i>Remodeling of E-Cadherin-Mediated Contacts via Cortical 
    Flows</i>. Institute of Science and Technology Austria, 2022, doi:<a href="https://doi.org/10.15479/at:ista:12153">10.15479/at:ista:12153</a>.
  short: F.N. Arslan, Remodeling of E-Cadherin-Mediated Contacts via Cortical  Flows,
    Institute of Science and Technology Austria, 2022.
corr_author: '1'
date_created: 2023-01-25T10:43:24Z
date_published: 2022-09-29T00:00:00Z
date_updated: 2026-06-18T19:47:50Z
day: '29'
ddc:
- '570'
degree_awarded: PhD
department:
- _id: GradSch
- _id: CaHe
doi: 10.15479/at:ista:12153
ec_funded: 1
file:
- access_level: open_access
  checksum: e54a3e69b83ebf166544164afd25608e
  content_type: application/pdf
  creator: cchlebak
  date_created: 2023-01-25T10:52:46Z
  date_updated: 2023-01-25T10:52:46Z
  file_id: '12369'
  file_name: THESIS_FINAL_FArslan_pdfa.pdf
  file_size: 14581024
  relation: main_file
  success: 1
file_date_updated: 2023-01-25T10:52:46Z
has_accepted_license: '1'
language:
- iso: eng
month: '09'
oa: 1
oa_version: Published Version
page: '113'
project:
- _id: 260F1432-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '742573'
  name: Interaction and feedback between cell mechanics and fate specification in
    vertebrate gastrulation
publication_identifier:
  isbn:
  - '978-3-99078-025-1 '
  issn:
  - 2663-337X
publication_status: published
publisher: Institute of Science and Technology Austria
related_material:
  record:
  - id: '9350'
    relation: part_of_dissertation
    status: public
status: public
supervisor:
- first_name: Carl-Philipp J
  full_name: Heisenberg, Carl-Philipp J
  id: 39427864-F248-11E8-B48F-1D18A9856A87
  last_name: Heisenberg
  orcid: 0000-0002-0912-4566
title: Remodeling of E-cadherin-mediated contacts via cortical  flows
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: dissertation
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
year: '2022'
...
---
_id: '12432'
abstract:
- lang: eng
  text: "We present CertifyHAM, a deterministic algorithm that takes a graph G as
    input and either finds a Hamilton cycle of G or outputs that such a cycle does
    not exist. If G ∼ G(n, p) and p ≥\r\n100 log n/n then the expected running time
    of CertifyHAM is O(n/p) which is best possible. This improves upon previous results
    due to Gurevich and Shelah, Thomason and Alon, and\r\nKrivelevich, who proved
    analogous results for p being constant, p ≥ 12n −1/3 and p ≥ 70n\r\n−1/2 respectively."
acknowledgement: "This project has received funding from the European Union’s Horizon
  2020\r\nresearch and innovation programme under the Marie Skłodowska-Curie grant\r\nagreement
  No 101034413"
article_processing_charge: No
author:
- first_name: Michael
  full_name: Anastos, Michael
  id: 0b2a4358-bb35-11ec-b7b9-e3279b593dbb
  last_name: Anastos
citation:
  ama: 'Anastos M. Solving the Hamilton cycle problem fast on average. In: <i>63rd
    Annual IEEE Symposium on Foundations of Computer Science</i>. Vol 2022-October.
    Institute of Electrical and Electronics Engineers; 2022:919-930. doi:<a href="https://doi.org/10.1109/FOCS54457.2022.00091">10.1109/FOCS54457.2022.00091</a>'
  apa: 'Anastos, M. (2022). Solving the Hamilton cycle problem fast on average. In
    <i>63rd Annual IEEE Symposium on Foundations of Computer Science</i> (Vol. 2022–October,
    pp. 919–930). Denver, CO, United States: Institute of Electrical and Electronics
    Engineers. <a href="https://doi.org/10.1109/FOCS54457.2022.00091">https://doi.org/10.1109/FOCS54457.2022.00091</a>'
  chicago: Anastos, Michael. “Solving the Hamilton Cycle Problem Fast on Average.”
    In <i>63rd Annual IEEE Symposium on Foundations of Computer Science</i>, 2022–October:919–30.
    Institute of Electrical and Electronics Engineers, 2022. <a href="https://doi.org/10.1109/FOCS54457.2022.00091">https://doi.org/10.1109/FOCS54457.2022.00091</a>.
  ieee: M. Anastos, “Solving the Hamilton cycle problem fast on average,” in <i>63rd
    Annual IEEE Symposium on Foundations of Computer Science</i>, Denver, CO, United
    States, 2022, vol. 2022–October, pp. 919–930.
  ista: 'Anastos M. 2022. Solving the Hamilton cycle problem fast on average. 63rd
    Annual IEEE Symposium on Foundations of Computer Science. FOCS: Foundations of
    Computer Science vol. 2022–October, 919–930.'
  mla: Anastos, Michael. “Solving the Hamilton Cycle Problem Fast on Average.” <i>63rd
    Annual IEEE Symposium on Foundations of Computer Science</i>, vol. 2022–October,
    Institute of Electrical and Electronics Engineers, 2022, pp. 919–30, doi:<a href="https://doi.org/10.1109/FOCS54457.2022.00091">10.1109/FOCS54457.2022.00091</a>.
  short: M. Anastos, in:, 63rd Annual IEEE Symposium on Foundations of Computer Science,
    Institute of Electrical and Electronics Engineers, 2022, pp. 919–930.
conference:
  end_date: 2022-11-03
  location: Denver, CO, United States
  name: 'FOCS: Foundations of Computer Science'
  start_date: 2022-10-31
corr_author: '1'
date_created: 2023-01-29T23:00:59Z
date_published: 2022-12-01T00:00:00Z
date_updated: 2025-07-10T11:50:26Z
day: '01'
department:
- _id: MaKw
doi: 10.1109/FOCS54457.2022.00091
ec_funded: 1
external_id:
  isi:
  - '000909382900084'
isi: 1
language:
- iso: eng
month: '12'
oa_version: None
page: 919-930
project:
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
  call_identifier: H2020
  grant_number: '101034413'
  name: 'IST-BRIDGE: International postdoctoral program'
publication: 63rd Annual IEEE Symposium on Foundations of Computer Science
publication_identifier:
  isbn:
  - '9781665455190'
  issn:
  - 0272-5428
publication_status: published
publisher: Institute of Electrical and Electronics Engineers
quality_controlled: '1'
scopus_import: '1'
status: public
title: Solving the Hamilton cycle problem fast on average
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 2022-October
year: '2022'
...
---
_id: '12516'
abstract:
- lang: eng
  text: "The homogeneous continuous LWE (hCLWE) problem is to distinguish samples
    of a specific high-dimensional Gaussian mixture from standard normal samples.
    It was shown to be at least as hard as Learning with Errors, but no reduction
    in the other direction is currently known.\r\nWe present four new public-key encryption
    schemes based on the hardness of hCLWE, with varying tradeoffs between decryption
    and security errors, and different discretization techniques. Our schemes yield
    a polynomial-time algorithm for solving hCLWE using a Statistical Zero-Knowledge
    oracle."
acknowledgement: "We are grateful to Devika Sharma and Luca Trevisan for their insight
  and advice and to an anonymous reviewer for helpful comments.\r\n\r\nThis work was
  supported by the European Research Council (ERC) under the European Union’s Horizon
  2020 research and innovation programme (Grant agreement No. 101019547). The first
  author was additionally supported by RGC GRF CUHK14209920 and the fourth author
  was additionally supported by ISF grant No. 1399/17, project PROMETHEUS (Grant 780701),
  and Cariplo CRYPTONOMEX grant."
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Andrej
  full_name: Bogdanov, Andrej
  last_name: Bogdanov
- first_name: Miguel
  full_name: Cueto Noval, Miguel
  id: ffc563a3-f6e0-11ea-865d-e3cce03d17cc
  last_name: Cueto Noval
  orcid: 0000-0002-2505-4246
- first_name: Charlotte
  full_name: Hoffmann, Charlotte
  id: 0f78d746-dc7d-11ea-9b2f-83f92091afe7
  last_name: Hoffmann
  orcid: 0000-0003-2027-5549
- first_name: Alon
  full_name: Rosen, Alon
  last_name: Rosen
citation:
  ama: 'Bogdanov A, Cueto Noval M, Hoffmann C, Rosen A. Public-Key Encryption from Homogeneous
    CLWE. In: <i>Theory of Cryptography</i>. Vol 13748. Springer Nature; 2022:565-592.
    doi:<a href="https://doi.org/10.1007/978-3-031-22365-5_20">10.1007/978-3-031-22365-5_20</a>'
  apa: 'Bogdanov, A., Cueto Noval, M., Hoffmann, C., &#38; Rosen, A. (2022). Public-Key
    Encryption from Homogeneous CLWE. In <i>Theory of Cryptography</i> (Vol. 13748,
    pp. 565–592). Chicago, IL, United States: Springer Nature. <a href="https://doi.org/10.1007/978-3-031-22365-5_20">https://doi.org/10.1007/978-3-031-22365-5_20</a>'
  chicago: Bogdanov, Andrej, Miguel Cueto Noval, Charlotte Hoffmann, and Alon Rosen.
    “Public-Key Encryption from Homogeneous CLWE.” In <i>Theory of Cryptography</i>,
    13748:565–92. Springer Nature, 2022. <a href="https://doi.org/10.1007/978-3-031-22365-5_20">https://doi.org/10.1007/978-3-031-22365-5_20</a>.
  ieee: A. Bogdanov, M. Cueto Noval, C. Hoffmann, and A. Rosen, “Public-Key Encryption
    from Homogeneous CLWE,” in <i>Theory of Cryptography</i>, Chicago, IL, United
    States, 2022, vol. 13748, pp. 565–592.
  ista: 'Bogdanov A, Cueto Noval M, Hoffmann C, Rosen A. 2022. Public-Key Encryption
    from Homogeneous CLWE. Theory of Cryptography. TCC: Theory of Cryptography, LNCS,
    vol. 13748, 565–592.'
  mla: Bogdanov, Andrej, et al. “Public-Key Encryption from Homogeneous CLWE.” <i>Theory
    of Cryptography</i>, vol. 13748, Springer Nature, 2022, pp. 565–92, doi:<a href="https://doi.org/10.1007/978-3-031-22365-5_20">10.1007/978-3-031-22365-5_20</a>.
  short: A. Bogdanov, M. Cueto Noval, C. Hoffmann, A. Rosen, in:, Theory of Cryptography,
    Springer Nature, 2022, pp. 565–592.
conference:
  end_date: 2022-11-10
  location: Chicago, IL, United States
  name: 'TCC: Theory of Cryptography'
  start_date: 2022-11-07
corr_author: '1'
date_created: 2023-02-05T23:01:00Z
date_published: 2022-12-21T00:00:00Z
date_updated: 2024-10-09T21:04:05Z
day: '21'
department:
- _id: KrPi
doi: 10.1007/978-3-031-22365-5_20
external_id:
  isi:
  - '000921318200020'
intvolume: '     13748'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://eprint.iacr.org/2022/093
month: '12'
oa: 1
oa_version: Preprint
page: 565-592
publication: Theory of Cryptography
publication_identifier:
  eissn:
  - 1611-3349
  isbn:
  - '9783031223648'
  issn:
  - 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Public-Key Encryption from Homogeneous CLWE
type: conference
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 13748
year: '2022'
...
---
_id: '12529'
abstract:
- lang: eng
  text: "We consider turn-based stochastic 2-player games on graphs with ω-regular
    winning conditions. We provide a direct symbolic algorithm for solving such games
    when the winning condition is formulated as a Rabin condition. For a stochastic
    Rabin game with k pairs over a game graph with n vertices, our algorithm runs
    in O(nk+2k!) symbolic steps, which improves the state of the art.\r\nWe have implemented
    our symbolic algorithm, along with performance optimizations including parallellization
    and acceleration, in a BDD-based synthesis tool called Fairsyn. We demonstrate
    the superiority of Fairsyn compared to the state of the art on a set of synthetic
    benchmarks derived from the VLTS benchmark suite and on a control system benchmark
    from the literature. In our experiments, Fairsyn performed significantly faster
    with up to two orders of magnitude improvement in computation time."
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Tamajit
  full_name: Banerjee, Tamajit
  last_name: Banerjee
- first_name: Rupak
  full_name: Majumdar, Rupak
  last_name: Majumdar
- first_name: Kaushik
  full_name: Mallik, Kaushik
  id: 0834ff3c-6d72-11ec-94e0-b5b0a4fb8598
  last_name: Mallik
  orcid: 0000-0001-9864-7475
- first_name: Anne-Kathrin
  full_name: Schmuck, Anne-Kathrin
  last_name: Schmuck
- first_name: Sadegh
  full_name: Soudjani, Sadegh
  last_name: Soudjani
citation:
  ama: 'Banerjee T, Majumdar R, Mallik K, Schmuck A-K, Soudjani S. A direct symbolic
    algorithm for solving stochastic rabin games. In: <i>28th International Conference
    on Tools and Algorithms for the Construction and Analysis of Systems</i>. Vol
    13244. Springer Nature; 2022:81-98. doi:<a href="https://doi.org/10.1007/978-3-030-99527-0_5">10.1007/978-3-030-99527-0_5</a>'
  apa: 'Banerjee, T., Majumdar, R., Mallik, K., Schmuck, A.-K., &#38; Soudjani, S.
    (2022). A direct symbolic algorithm for solving stochastic rabin games. In <i>28th
    International Conference on Tools and Algorithms for the Construction and Analysis
    of Systems</i> (Vol. 13244, pp. 81–98). Munich, Germany: Springer Nature. <a href="https://doi.org/10.1007/978-3-030-99527-0_5">https://doi.org/10.1007/978-3-030-99527-0_5</a>'
  chicago: Banerjee, Tamajit, Rupak Majumdar, Kaushik Mallik, Anne-Kathrin Schmuck,
    and Sadegh Soudjani. “A Direct Symbolic Algorithm for Solving Stochastic Rabin
    Games.” In <i>28th International Conference on Tools and Algorithms for the Construction
    and Analysis of Systems</i>, 13244:81–98. Springer Nature, 2022. <a href="https://doi.org/10.1007/978-3-030-99527-0_5">https://doi.org/10.1007/978-3-030-99527-0_5</a>.
  ieee: T. Banerjee, R. Majumdar, K. Mallik, A.-K. Schmuck, and S. Soudjani, “A direct
    symbolic algorithm for solving stochastic rabin games,” in <i>28th International
    Conference on Tools and Algorithms for the Construction and Analysis of Systems</i>,
    Munich, Germany, 2022, vol. 13244, pp. 81–98.
  ista: 'Banerjee T, Majumdar R, Mallik K, Schmuck A-K, Soudjani S. 2022. A direct
    symbolic algorithm for solving stochastic rabin games. 28th International Conference
    on Tools and Algorithms for the Construction and Analysis of Systems. TACAS: Tools
    and Algorithms for the Construction and Analysis of Systems, LNCS, vol. 13244,
    81–98.'
  mla: Banerjee, Tamajit, et al. “A Direct Symbolic Algorithm for Solving Stochastic
    Rabin Games.” <i>28th International Conference on Tools and Algorithms for the
    Construction and Analysis of Systems</i>, vol. 13244, Springer Nature, 2022, pp.
    81–98, doi:<a href="https://doi.org/10.1007/978-3-030-99527-0_5">10.1007/978-3-030-99527-0_5</a>.
  short: T. Banerjee, R. Majumdar, K. Mallik, A.-K. Schmuck, S. Soudjani, in:, 28th
    International Conference on Tools and Algorithms for the Construction and Analysis
    of Systems, Springer Nature, 2022, pp. 81–98.
conference:
  end_date: 2022-04-07
  location: Munich, Germany
  name: 'TACAS: Tools and Algorithms for the Construction and Analysis of Systems'
  start_date: 2022-04-02
corr_author: '1'
date_created: 2023-02-08T11:43:34Z
date_published: 2022-03-29T00:00:00Z
date_updated: 2024-10-09T21:04:10Z
day: '29'
doi: 10.1007/978-3-030-99527-0_5
extern: '1'
intvolume: '     13244'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1007/978-3-030-99527-0_5
month: '03'
oa: 1
oa_version: Published Version
page: 81-98
publication: 28th International Conference on Tools and Algorithms for the Construction
  and Analysis of Systems
publication_identifier:
  eisbn:
  - '9783030995270'
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: A direct symbolic algorithm for solving stochastic rabin games
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 13244
year: '2022'
...
