---
_id: '17862'
abstract:
- lang: eng
  text: Electric field acceleration of alkyl hydroperoxide activation to acylate amines
    in the scanning tunneling microscope-based break-junction is reported. Alkyl hydroperoxide
    mixtures, generated from hydrocarbon autoxidation in air, were found to be competent
    reagents for the functionalization of gold surfaces. Intermolecular coupling on
    the surface in the presence of amines was observed, yielding normal alkylamides.
    This novel mode of alkyl hydroperoxide activation to generate acylium equivalents
    was found to be responsive to the magnitude of the bias in the break junction,
    indicating an electric field influence on this novel reactivity.
article_processing_charge: No
article_type: original
author:
- first_name: Xiye
  full_name: Wang, Xiye
  last_name: Wang
- first_name: Boyuan
  full_name: Zhang, Boyuan
  last_name: Zhang
- first_name: Brandon
  full_name: Fowler, Brandon
  last_name: Fowler
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
- first_name: Tomislav
  full_name: Rovis, Tomislav
  last_name: Rovis
citation:
  ama: Wang X, Zhang B, Fowler B, Venkataraman L, Rovis T. Alkane solvent-derived
    acylation reaction driven by electric fields. <i>Journal of the American Chemical
    Society</i>. 2023;145(22):11903-11906. doi:<a href="https://doi.org/10.1021/jacs.3c02064">10.1021/jacs.3c02064</a>
  apa: Wang, X., Zhang, B., Fowler, B., Venkataraman, L., &#38; Rovis, T. (2023).
    Alkane solvent-derived acylation reaction driven by electric fields. <i>Journal
    of the American Chemical Society</i>. American Chemical Society. <a href="https://doi.org/10.1021/jacs.3c02064">https://doi.org/10.1021/jacs.3c02064</a>
  chicago: Wang, Xiye, Boyuan Zhang, Brandon Fowler, Latha Venkataraman, and Tomislav
    Rovis. “Alkane Solvent-Derived Acylation Reaction Driven by Electric Fields.”
    <i>Journal of the American Chemical Society</i>. American Chemical Society, 2023.
    <a href="https://doi.org/10.1021/jacs.3c02064">https://doi.org/10.1021/jacs.3c02064</a>.
  ieee: X. Wang, B. Zhang, B. Fowler, L. Venkataraman, and T. Rovis, “Alkane solvent-derived
    acylation reaction driven by electric fields,” <i>Journal of the American Chemical
    Society</i>, vol. 145, no. 22. American Chemical Society, pp. 11903–11906, 2023.
  ista: Wang X, Zhang B, Fowler B, Venkataraman L, Rovis T. 2023. Alkane solvent-derived
    acylation reaction driven by electric fields. Journal of the American Chemical
    Society. 145(22), 11903–11906.
  mla: Wang, Xiye, et al. “Alkane Solvent-Derived Acylation Reaction Driven by Electric
    Fields.” <i>Journal of the American Chemical Society</i>, vol. 145, no. 22, American
    Chemical Society, 2023, pp. 11903–06, doi:<a href="https://doi.org/10.1021/jacs.3c02064">10.1021/jacs.3c02064</a>.
  short: X. Wang, B. Zhang, B. Fowler, L. Venkataraman, T. Rovis, Journal of the American
    Chemical Society 145 (2023) 11903–11906.
date_created: 2024-09-06T12:55:12Z
date_published: 2023-05-25T00:00:00Z
date_updated: 2024-11-25T12:29:49Z
day: '25'
doi: 10.1021/jacs.3c02064
extern: '1'
external_id:
  pmid:
  - '37227235'
intvolume: '       145'
issue: '22'
language:
- iso: eng
month: '05'
oa_version: None
page: 11903-11906
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Alkane solvent-derived acylation reaction driven by electric fields
type: journal_article
user_id: 68b8ca59-c5b3-11ee-8790-cd641c68093d
volume: 145
year: '2023'
...
---
OA_type: closed access
_id: '17864'
abstract:
- lang: eng
  text: 'Molecular one-dimensional topological insulators (1D TIs), which conduct
    through energetically low-lying topological edge states, can be extremely highly
    conducting and exhibit a reversed conductance decay, affording them great potential
    as building blocks for nanoelectronic devices. However, these properties can only
    be observed at the short length limit. To extend the length at which these anomalous
    effects can be observed, we design topological oligo[n]emeraldine wires using
    short 1D TIs as building blocks. As the wire length increases, the number of topological
    states increases, enabling an increased electronic transmission along the wire;
    specifically, we show that we can drive over a microampere current through a single
    ∼5 nm molecular wire, appreciably more than what has been observed in other long
    wires reported to date. Calculations and experiments show that the longest oligo[7]emeraldine
    with doped topological states has over 106 enhancements in the transmission compared
    to its pristine form. The discovery of these highly conductive, long organic wires
    helps overcome a fundamental hurdle to implementing molecules in complex, nanoscale
    circuitry: their structures become too insulating at lengths that are useful in
    designing nanoscale circuits.'
article_processing_charge: No
author:
- first_name: Liang
  full_name: Li, Liang
  last_name: Li
- first_name: Shayan
  full_name: Louie, Shayan
  last_name: Louie
- first_name: Austin M.
  full_name: Evans, Austin M.
  last_name: Evans
- first_name: Elena
  full_name: Meirzadeh, Elena
  last_name: Meirzadeh
- first_name: Colin
  full_name: Nuckolls, Colin
  last_name: Nuckolls
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
citation:
  ama: Li L, Louie S, Evans AM, Meirzadeh E, Nuckolls C, Venkataraman L. Topological
    radical pairs produce ultrahigh conductance in long molecular wires. <i>Journal
    of the American Chemical Society</i>. 2023;145(4):2492-2498. doi:<a href="https://doi.org/10.1021/jacs.2c12059">10.1021/jacs.2c12059</a>
  apa: Li, L., Louie, S., Evans, A. M., Meirzadeh, E., Nuckolls, C., &#38; Venkataraman,
    L. (2023). Topological radical pairs produce ultrahigh conductance in long molecular
    wires. <i>Journal of the American Chemical Society</i>. American Chemical Society.
    <a href="https://doi.org/10.1021/jacs.2c12059">https://doi.org/10.1021/jacs.2c12059</a>
  chicago: Li, Liang, Shayan Louie, Austin M. Evans, Elena Meirzadeh, Colin Nuckolls,
    and Latha Venkataraman. “Topological Radical Pairs Produce Ultrahigh Conductance
    in Long Molecular Wires.” <i>Journal of the American Chemical Society</i>. American
    Chemical Society, 2023. <a href="https://doi.org/10.1021/jacs.2c12059">https://doi.org/10.1021/jacs.2c12059</a>.
  ieee: L. Li, S. Louie, A. M. Evans, E. Meirzadeh, C. Nuckolls, and L. Venkataraman,
    “Topological radical pairs produce ultrahigh conductance in long molecular wires,”
    <i>Journal of the American Chemical Society</i>, vol. 145, no. 4. American Chemical
    Society, pp. 2492–2498, 2023.
  ista: Li L, Louie S, Evans AM, Meirzadeh E, Nuckolls C, Venkataraman L. 2023. Topological
    radical pairs produce ultrahigh conductance in long molecular wires. Journal of
    the American Chemical Society. 145(4), 2492–2498.
  mla: Li, Liang, et al. “Topological Radical Pairs Produce Ultrahigh Conductance
    in Long Molecular Wires.” <i>Journal of the American Chemical Society</i>, vol.
    145, no. 4, American Chemical Society, 2023, pp. 2492–98, doi:<a href="https://doi.org/10.1021/jacs.2c12059">10.1021/jacs.2c12059</a>.
  short: L. Li, S. Louie, A.M. Evans, E. Meirzadeh, C. Nuckolls, L. Venkataraman,
    Journal of the American Chemical Society 145 (2023) 2492–2498.
date_created: 2024-09-06T12:57:45Z
date_published: 2023-01-23T00:00:00Z
date_updated: 2024-11-25T14:21:10Z
day: '23'
doi: 10.1021/jacs.2c12059
extern: '1'
external_id:
  pmid:
  - '36689781'
intvolume: '       145'
issue: '4'
language:
- iso: eng
month: '01'
oa_version: None
page: 2492-2498
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Topological radical pairs produce ultrahigh conductance in long molecular wires
type: journal_article
user_id: 68b8ca59-c5b3-11ee-8790-cd641c68093d
volume: 145
year: '2023'
...
---
_id: '13216'
abstract:
- lang: eng
  text: Physical catalysts often have multiple sites where reactions can take place.
    One prominent example is single-atom alloys, where the reactive dopant atoms can
    preferentially locate in the bulk or at different sites on the surface of the
    nanoparticle. However, ab initio modeling of catalysts usually only considers
    one site of the catalyst, neglecting the effects of multiple sites. Here, nanoparticles
    of copper doped with single-atom rhodium or palladium are modeled for the dehydrogenation
    of propane. Single-atom alloy nanoparticles are simulated at 400–600 K, using
    machine learning potentials trained on density functional theory calculations,
    and then the occupation of different single-atom active sites is identified using
    a similarity kernel. Further, the turnover frequency for all possible sites is
    calculated for propane dehydrogenation to propene through microkinetic modeling
    using density functional theory calculations. The total turnover frequencies of
    the whole nanoparticle are then described from both the population and the individual
    turnover frequency of each site. Under operating conditions, rhodium as a dopant
    is found to almost exclusively occupy (111) surface sites while palladium as a
    dopant occupies a greater variety of facets. Undercoordinated dopant surface sites
    are found to tend to be more reactive for propane dehydrogenation compared to
    the (111) surface. It is found that considering the dynamics of the single-atom
    alloy nanoparticle has a profound effect on the calculated catalytic activity
    of single-atom alloys by several orders of magnitude.
acknowledgement: "B.C. acknowledges resources provided by the Cambridge Tier2 system
  operated by the University of Cambridge Research\r\nComputing Service funded by
  EPSRC Tier-2 capital grant EP/\r\nP020259/1."
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Rhys
  full_name: Bunting, Rhys
  id: 91deeae8-1207-11ec-b130-c194ad5b50c6
  last_name: Bunting
  orcid: 0000-0001-6928-074X
- first_name: Felix
  full_name: Wodaczek, Felix
  id: 8b4b6a9f-32b0-11ee-9fa8-bbe85e26258e
  last_name: Wodaczek
  orcid: 0009-0000-1457-795X
- first_name: Tina
  full_name: Torabi, Tina
  last_name: Torabi
- first_name: Bingqing
  full_name: Cheng, Bingqing
  id: cbe3cda4-d82c-11eb-8dc7-8ff94289fcc9
  last_name: Cheng
  orcid: 0000-0002-3584-9632
citation:
  ama: 'Bunting R, Wodaczek F, Torabi T, Cheng B. Reactivity of single-atom alloy
    nanoparticles: Modeling the dehydrogenation of propane. <i>Journal of the American
    Chemical Society</i>. 2023;145(27):14894-14902. doi:<a href="https://doi.org/10.1021/jacs.3c04030">10.1021/jacs.3c04030</a>'
  apa: 'Bunting, R., Wodaczek, F., Torabi, T., &#38; Cheng, B. (2023). Reactivity
    of single-atom alloy nanoparticles: Modeling the dehydrogenation of propane. <i>Journal
    of the American Chemical Society</i>. American Chemical Society. <a href="https://doi.org/10.1021/jacs.3c04030">https://doi.org/10.1021/jacs.3c04030</a>'
  chicago: 'Bunting, Rhys, Felix Wodaczek, Tina Torabi, and Bingqing Cheng. “Reactivity
    of Single-Atom Alloy Nanoparticles: Modeling the Dehydrogenation of Propane.”
    <i>Journal of the American Chemical Society</i>. American Chemical Society, 2023.
    <a href="https://doi.org/10.1021/jacs.3c04030">https://doi.org/10.1021/jacs.3c04030</a>.'
  ieee: 'R. Bunting, F. Wodaczek, T. Torabi, and B. Cheng, “Reactivity of single-atom
    alloy nanoparticles: Modeling the dehydrogenation of propane,” <i>Journal of the
    American Chemical Society</i>, vol. 145, no. 27. American Chemical Society, pp.
    14894–14902, 2023.'
  ista: 'Bunting R, Wodaczek F, Torabi T, Cheng B. 2023. Reactivity of single-atom
    alloy nanoparticles: Modeling the dehydrogenation of propane. Journal of the American
    Chemical Society. 145(27), 14894–14902.'
  mla: 'Bunting, Rhys, et al. “Reactivity of Single-Atom Alloy Nanoparticles: Modeling
    the Dehydrogenation of Propane.” <i>Journal of the American Chemical Society</i>,
    vol. 145, no. 27, American Chemical Society, 2023, pp. 14894–902, doi:<a href="https://doi.org/10.1021/jacs.3c04030">10.1021/jacs.3c04030</a>.'
  short: R. Bunting, F. Wodaczek, T. Torabi, B. Cheng, Journal of the American Chemical
    Society 145 (2023) 14894–14902.
corr_author: '1'
das_tickbox: '0'
date_created: 2023-07-12T09:16:40Z
date_published: 2023-06-30T00:00:00Z
date_updated: 2026-08-07T11:37:26Z
day: '30'
ddc:
- '540'
department:
- _id: MaIb
- _id: BiCh
doi: 10.1021/jacs.3c04030
external_id:
  isi:
  - '001020623900001'
  pmid:
  - '37390457'
file:
- access_level: open_access
  checksum: e07d5323f9c0e5cbd1ad6453f29440ab
  content_type: application/pdf
  creator: cchlebak
  date_created: 2023-07-12T10:22:04Z
  date_updated: 2023-07-12T10:22:04Z
  file_id: '13219'
  file_name: 2023_JACS_Bunting.pdf
  file_size: 3155843
  relation: main_file
  success: 1
file_date_updated: 2023-07-12T10:22:04Z
has_accepted_license: '1'
intvolume: '       145'
isi: 1
issue: '27'
keyword:
- Colloid and Surface Chemistry
- Biochemistry
- General Chemistry
- Catalysis
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
page: 14894-14902
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
researchdata_availability: no
scopus_import: '1'
status: public
supplementarymaterial: yes
title: 'Reactivity of single-atom alloy nanoparticles: Modeling the dehydrogenation
  of propane'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 145
year: '2023'
...
---
_id: '13348'
abstract:
- lang: eng
  text: Molecular confinement effects can profoundly alter the physicochemical properties
    of the confined species. A plethora of organic molecules were encapsulated within
    the cavities of supramolecular hosts, and the impact of the cavity size and polarity
    was widely investigated. However, the extent to which the properties of the confined
    guests can be affected by the symmetry of the cage─which dictates the shape of
    the cavity─remains to be understood. Here we show that cage symmetry has a dramatic
    effect on the equilibrium between two isomers of the encapsulated spiropyran guests.
    Working with two Pd-based coordination cages featuring similarly sized but differently
    shaped hydrophobic cavities, we found a highly selective stabilization of the
    isomer whose shape matches that of the cavity of the cage. A Td-symmetric cage
    stabilized the spiropyrans’ colorless form and rendered them photochemically inert.
    In contrast, a D2h-symmetric cage favored the colored isomer, while maintaining
    reversible photoswitching between the two states of the encapsulated spiropyrans.
    We also show that the switching kinetics strongly depend on the substitution pattern
    on the spiropyran scaffold. This finding was used to fabricate a time-sensitive
    information storage medium with tunable lifetimes of the encoded messages.
article_processing_charge: No
article_type: original
author:
- first_name: Jinhua
  full_name: Wang, Jinhua
  last_name: Wang
- first_name: Liat
  full_name: Avram, Liat
  last_name: Avram
- first_name: Yael
  full_name: Diskin-Posner, Yael
  last_name: Diskin-Posner
- first_name: Michał J.
  full_name: Białek, Michał J.
  last_name: Białek
- first_name: Wojciech
  full_name: Stawski, Wojciech
  last_name: Stawski
- first_name: Moran
  full_name: Feller, Moran
  last_name: Feller
- first_name: Rafal
  full_name: Klajn, Rafal
  id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
  last_name: Klajn
citation:
  ama: Wang J, Avram L, Diskin-Posner Y, et al. Altering the properties of spiropyran
    switches using coordination cages with different symmetries. <i>Journal of the
    American Chemical Society</i>. 2022;144(46):21244-21254. doi:<a href="https://doi.org/10.1021/jacs.2c08901">10.1021/jacs.2c08901</a>
  apa: Wang, J., Avram, L., Diskin-Posner, Y., Białek, M. J., Stawski, W., Feller,
    M., &#38; Klajn, R. (2022). Altering the properties of spiropyran switches using
    coordination cages with different symmetries. <i>Journal of the American Chemical
    Society</i>. American Chemical Society. <a href="https://doi.org/10.1021/jacs.2c08901">https://doi.org/10.1021/jacs.2c08901</a>
  chicago: Wang, Jinhua, Liat Avram, Yael Diskin-Posner, Michał J. Białek, Wojciech
    Stawski, Moran Feller, and Rafal Klajn. “Altering the Properties of Spiropyran
    Switches Using Coordination Cages with Different Symmetries.” <i>Journal of the
    American Chemical Society</i>. American Chemical Society, 2022. <a href="https://doi.org/10.1021/jacs.2c08901">https://doi.org/10.1021/jacs.2c08901</a>.
  ieee: J. Wang <i>et al.</i>, “Altering the properties of spiropyran switches using
    coordination cages with different symmetries,” <i>Journal of the American Chemical
    Society</i>, vol. 144, no. 46. American Chemical Society, pp. 21244–21254, 2022.
  ista: Wang J, Avram L, Diskin-Posner Y, Białek MJ, Stawski W, Feller M, Klajn R.
    2022. Altering the properties of spiropyran switches using coordination cages
    with different symmetries. Journal of the American Chemical Society. 144(46),
    21244–21254.
  mla: Wang, Jinhua, et al. “Altering the Properties of Spiropyran Switches Using
    Coordination Cages with Different Symmetries.” <i>Journal of the American Chemical
    Society</i>, vol. 144, no. 46, American Chemical Society, 2022, pp. 21244–54,
    doi:<a href="https://doi.org/10.1021/jacs.2c08901">10.1021/jacs.2c08901</a>.
  short: J. Wang, L. Avram, Y. Diskin-Posner, M.J. Białek, W. Stawski, M. Feller,
    R. Klajn, Journal of the American Chemical Society 144 (2022) 21244–21254.
date_created: 2023-08-01T09:31:01Z
date_published: 2022-11-15T00:00:00Z
date_updated: 2024-10-14T12:08:54Z
day: '15'
doi: 10.1021/jacs.2c08901
extern: '1'
intvolume: '       144'
issue: '46'
keyword:
- Colloid and Surface Chemistry
- Biochemistry
- General Chemistry
- Catalysis
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1021/jacs.2c08901
month: '11'
oa: 1
oa_version: Published Version
page: 21244-21254
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Altering the properties of spiropyran switches using coordination cages with
  different symmetries
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 144
year: '2022'
...
---
_id: '11978'
abstract:
- lang: eng
  text: Dual photocatalysis and nickel catalysis can effect cross-coupling under mild
    conditions, but little is known about the in situ kinetics of this class of reactions.
    We report a comprehensive kinetic examination of a model carboxylate O-arylation,
    comparing a state-of-the-art homogeneous photocatalyst (Ir(ppy)3) with a competitive
    heterogeneous photocatalyst (graphitic carbon nitride). Experimental conditions
    were adjusted such that the nickel catalytic cycle is saturated with excited photocatalyst.
    This approach was designed to remove the role of the photocatalyst, by which only
    the intrinsic behaviors of the nickel catalytic cycles are observed. The two reactions
    did not display identical kinetics. Ir(ppy)3 deactivates the nickel catalytic
    cycle and creates more dehalogenated side product. Kinetic data for the reaction
    using Ir(ppy)3 supports a turnover-limiting reductive elimination. Graphitic carbon
    nitride gave higher selectivity, even at high photocatalyst-to-nickel ratios.
    The heterogeneous reaction also showed a rate dependence on aryl halide, indicating
    that oxidative addition plays a role in rate determination. The results argue
    against the current mechanistic hypothesis, which states that the photocatalyst
    is only involved to trigger reductive elimination.
article_processing_charge: No
article_type: original
author:
- first_name: Jamal A.
  full_name: Malik, Jamal A.
  last_name: Malik
- first_name: Amiera
  full_name: Madani, Amiera
  last_name: Madani
- first_name: Bartholomäus
  full_name: Pieber, Bartholomäus
  id: 93e5e5b2-0da6-11ed-8a41-af589a024726
  last_name: Pieber
  orcid: 0000-0001-8689-388X
- first_name: Peter H.
  full_name: Seeberger, Peter H.
  last_name: Seeberger
citation:
  ama: Malik JA, Madani A, Pieber B, Seeberger PH. Evidence for photocatalyst involvement
    in oxidative additions of nickel-catalyzed carboxylate O-arylations. <i>Journal
    of the American Chemical Society</i>. 2020;142(25):11042-11049. doi:<a href="https://doi.org/10.1021/jacs.0c02848">10.1021/jacs.0c02848</a>
  apa: Malik, J. A., Madani, A., Pieber, B., &#38; Seeberger, P. H. (2020). Evidence
    for photocatalyst involvement in oxidative additions of nickel-catalyzed carboxylate
    O-arylations. <i>Journal of the American Chemical Society</i>. American Chemical
    Society. <a href="https://doi.org/10.1021/jacs.0c02848">https://doi.org/10.1021/jacs.0c02848</a>
  chicago: Malik, Jamal A., Amiera Madani, Bartholomäus Pieber, and Peter H. Seeberger.
    “Evidence for Photocatalyst Involvement in Oxidative Additions of Nickel-Catalyzed
    Carboxylate O-Arylations.” <i>Journal of the American Chemical Society</i>. American
    Chemical Society, 2020. <a href="https://doi.org/10.1021/jacs.0c02848">https://doi.org/10.1021/jacs.0c02848</a>.
  ieee: J. A. Malik, A. Madani, B. Pieber, and P. H. Seeberger, “Evidence for photocatalyst
    involvement in oxidative additions of nickel-catalyzed carboxylate O-arylations,”
    <i>Journal of the American Chemical Society</i>, vol. 142, no. 25. American Chemical
    Society, pp. 11042–11049, 2020.
  ista: Malik JA, Madani A, Pieber B, Seeberger PH. 2020. Evidence for photocatalyst
    involvement in oxidative additions of nickel-catalyzed carboxylate O-arylations.
    Journal of the American Chemical Society. 142(25), 11042–11049.
  mla: Malik, Jamal A., et al. “Evidence for Photocatalyst Involvement in Oxidative
    Additions of Nickel-Catalyzed Carboxylate O-Arylations.” <i>Journal of the American
    Chemical Society</i>, vol. 142, no. 25, American Chemical Society, 2020, pp. 11042–49,
    doi:<a href="https://doi.org/10.1021/jacs.0c02848">10.1021/jacs.0c02848</a>.
  short: J.A. Malik, A. Madani, B. Pieber, P.H. Seeberger, Journal of the American
    Chemical Society 142 (2020) 11042–11049.
date_created: 2022-08-25T10:57:38Z
date_published: 2020-06-24T00:00:00Z
date_updated: 2024-10-14T12:06:34Z
day: '24'
doi: 10.1021/jacs.0c02848
extern: '1'
external_id:
  pmid:
  - '32469219'
intvolume: '       142'
issue: '25'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1021/jacs.0c02848
month: '06'
oa: 1
oa_version: Published Version
page: 11042-11049
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Evidence for photocatalyst involvement in oxidative additions of nickel-catalyzed
  carboxylate O-arylations
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 142
year: '2020'
...
---
_id: '13362'
abstract:
- lang: eng
  text: Aggregation of organic molecules can drastically affect their physicochemical
    properties. For instance, the optical properties of BODIPY dyes are inherently
    related to the degree of aggregation and the mutual orientation of BODIPY units
    within these aggregates. Whereas the noncovalent aggregation of various BODIPY
    dyes has been studied in diverse media, the ill-defined nature of these aggregates
    has made it difficult to elucidate the structure–property relationships. Here,
    we studied the encapsulation of three structurally simple BODIPY derivatives within
    the hydrophobic cavity of a water-soluble, flexible PdII6L4 coordination cage.
    The cavity size allowed for the selective encapsulation of two dye molecules,
    irrespective of the substitution pattern on the BODIPY core. Working with a model,
    a pentamethyl-substituted derivative, we found that the mutual orientation of
    two BODIPY units in the cage’s cavity was remarkably similar to that in the crystalline
    state of the free dye, allowing us to isolate and characterize the smallest possible
    noncovalent H-type BODIPY aggregate, namely, an H-dimer. Interestingly, a CF3-substituted
    BODIPY, known for forming J-type aggregates, was also encapsulated as an H-dimer.
    Taking advantage of the dynamic nature of encapsulation, we developed a system
    in which reversible switching between H- and J-aggregates can be induced for multiple
    cycles simply by addition and subsequent destruction of the cage. We expect that
    the ability to rapidly and reversibly manipulate the optical properties of supramolecular
    inclusion complexes in aqueous media will open up avenues for developing detection
    systems that operate within biological environments.
article_processing_charge: No
article_type: original
author:
- first_name: Julius
  full_name: Gemen, Julius
  last_name: Gemen
- first_name: Johannes
  full_name: Ahrens, Johannes
  last_name: Ahrens
- first_name: Linda J. W.
  full_name: Shimon, Linda J. W.
  last_name: Shimon
- first_name: Rafal
  full_name: Klajn, Rafal
  id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
  last_name: Klajn
citation:
  ama: Gemen J, Ahrens J, Shimon LJW, Klajn R. Modulating the optical properties of
    BODIPY dyes by noncovalent dimerization within a flexible coordination cage. <i>Journal
    of the American Chemical Society</i>. 2020;142(41):17721-17729. doi:<a href="https://doi.org/10.1021/jacs.0c08589">10.1021/jacs.0c08589</a>
  apa: Gemen, J., Ahrens, J., Shimon, L. J. W., &#38; Klajn, R. (2020). Modulating
    the optical properties of BODIPY dyes by noncovalent dimerization within a flexible
    coordination cage. <i>Journal of the American Chemical Society</i>. American Chemical
    Society. <a href="https://doi.org/10.1021/jacs.0c08589">https://doi.org/10.1021/jacs.0c08589</a>
  chicago: Gemen, Julius, Johannes Ahrens, Linda J. W. Shimon, and Rafal Klajn. “Modulating
    the Optical Properties of BODIPY Dyes by Noncovalent Dimerization within a Flexible
    Coordination Cage.” <i>Journal of the American Chemical Society</i>. American
    Chemical Society, 2020. <a href="https://doi.org/10.1021/jacs.0c08589">https://doi.org/10.1021/jacs.0c08589</a>.
  ieee: J. Gemen, J. Ahrens, L. J. W. Shimon, and R. Klajn, “Modulating the optical
    properties of BODIPY dyes by noncovalent dimerization within a flexible coordination
    cage,” <i>Journal of the American Chemical Society</i>, vol. 142, no. 41. American
    Chemical Society, pp. 17721–17729, 2020.
  ista: Gemen J, Ahrens J, Shimon LJW, Klajn R. 2020. Modulating the optical properties
    of BODIPY dyes by noncovalent dimerization within a flexible coordination cage.
    Journal of the American Chemical Society. 142(41), 17721–17729.
  mla: Gemen, Julius, et al. “Modulating the Optical Properties of BODIPY Dyes by
    Noncovalent Dimerization within a Flexible Coordination Cage.” <i>Journal of the
    American Chemical Society</i>, vol. 142, no. 41, American Chemical Society, 2020,
    pp. 17721–29, doi:<a href="https://doi.org/10.1021/jacs.0c08589">10.1021/jacs.0c08589</a>.
  short: J. Gemen, J. Ahrens, L.J.W. Shimon, R. Klajn, Journal of the American Chemical
    Society 142 (2020) 17721–17729.
date_created: 2023-08-01T09:36:10Z
date_published: 2020-10-04T00:00:00Z
date_updated: 2024-10-14T12:12:41Z
day: '04'
doi: 10.1021/jacs.0c08589
extern: '1'
external_id:
  pmid:
  - '33006898'
intvolume: '       142'
issue: '41'
keyword:
- Colloid and Surface Chemistry
- Biochemistry
- General Chemistry
- Catalysis
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1021/jacs.0c08589
month: '10'
oa: 1
oa_version: Published Version
page: 17721-17729
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Modulating the optical properties of BODIPY dyes by noncovalent dimerization
  within a flexible coordination cage
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 142
year: '2020'
...
---
_id: '13364'
abstract:
- lang: eng
  text: Photochromic molecules undergo reversible isomerization upon irradiation with
    light at different wavelengths, a process that can alter their physical and chemical
    properties. For instance, dihydropyrene (DHP) is a deep-colored compound that
    isomerizes to light-brown cyclophanediene (CPD) upon irradiation with visible
    light. CPD can then isomerize back to DHP upon irradiation with UV light or thermally
    in the dark. Conversion between DHP and CPD is thought to proceed via a biradical
    intermediate; bimolecular events involving this unstable intermediate thus result
    in rapid decomposition and poor cycling performance. Here, we show that the reversible
    isomerization of DHP can be stabilized upon confinement within a PdII6L4 coordination
    cage. By protecting this reactive intermediate using the cage, each isomerization
    reaction proceeds to higher yield, which significantly decreases the fatigue experienced
    by the system upon repeated photocycling. Although molecular confinement is known
    to help stabilize reactive species, this effect is not typically employed to protect
    reactive intermediates and thus improve reaction yields. We envisage that performing
    reactions under confinement will not only improve the cyclic performance of photochromic
    molecules, but may also increase the amount of product obtainable from traditionally
    low-yielding organic reactions.
article_processing_charge: No
article_type: original
author:
- first_name: Martina
  full_name: Canton, Martina
  last_name: Canton
- first_name: Angela B.
  full_name: Grommet, Angela B.
  last_name: Grommet
- first_name: Luca
  full_name: Pesce, Luca
  last_name: Pesce
- first_name: Julius
  full_name: Gemen, Julius
  last_name: Gemen
- first_name: Shiming
  full_name: Li, Shiming
  last_name: Li
- first_name: Yael
  full_name: Diskin-Posner, Yael
  last_name: Diskin-Posner
- first_name: Alberto
  full_name: Credi, Alberto
  last_name: Credi
- first_name: Giovanni M.
  full_name: Pavan, Giovanni M.
  last_name: Pavan
- first_name: Joakim
  full_name: Andréasson, Joakim
  last_name: Andréasson
- first_name: Rafal
  full_name: Klajn, Rafal
  id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
  last_name: Klajn
citation:
  ama: Canton M, Grommet AB, Pesce L, et al. Improving fatigue resistance of dihydropyrene
    by encapsulation within a coordination cage. <i>Journal of the American Chemical
    Society</i>. 2020;142(34):14557-14565. doi:<a href="https://doi.org/10.1021/jacs.0c06146">10.1021/jacs.0c06146</a>
  apa: Canton, M., Grommet, A. B., Pesce, L., Gemen, J., Li, S., Diskin-Posner, Y.,
    … Klajn, R. (2020). Improving fatigue resistance of dihydropyrene by encapsulation
    within a coordination cage. <i>Journal of the American Chemical Society</i>. American
    Chemical Society. <a href="https://doi.org/10.1021/jacs.0c06146">https://doi.org/10.1021/jacs.0c06146</a>
  chicago: Canton, Martina, Angela B. Grommet, Luca Pesce, Julius Gemen, Shiming Li,
    Yael Diskin-Posner, Alberto Credi, Giovanni M. Pavan, Joakim Andréasson, and Rafal
    Klajn. “Improving Fatigue Resistance of Dihydropyrene by Encapsulation within
    a Coordination Cage.” <i>Journal of the American Chemical Society</i>. American
    Chemical Society, 2020. <a href="https://doi.org/10.1021/jacs.0c06146">https://doi.org/10.1021/jacs.0c06146</a>.
  ieee: M. Canton <i>et al.</i>, “Improving fatigue resistance of dihydropyrene by
    encapsulation within a coordination cage,” <i>Journal of the American Chemical
    Society</i>, vol. 142, no. 34. American Chemical Society, pp. 14557–14565, 2020.
  ista: Canton M, Grommet AB, Pesce L, Gemen J, Li S, Diskin-Posner Y, Credi A, Pavan
    GM, Andréasson J, Klajn R. 2020. Improving fatigue resistance of dihydropyrene
    by encapsulation within a coordination cage. Journal of the American Chemical
    Society. 142(34), 14557–14565.
  mla: Canton, Martina, et al. “Improving Fatigue Resistance of Dihydropyrene by Encapsulation
    within a Coordination Cage.” <i>Journal of the American Chemical Society</i>,
    vol. 142, no. 34, American Chemical Society, 2020, pp. 14557–65, doi:<a href="https://doi.org/10.1021/jacs.0c06146">10.1021/jacs.0c06146</a>.
  short: M. Canton, A.B. Grommet, L. Pesce, J. Gemen, S. Li, Y. Diskin-Posner, A.
    Credi, G.M. Pavan, J. Andréasson, R. Klajn, Journal of the American Chemical Society
    142 (2020) 14557–14565.
date_created: 2023-08-01T09:36:59Z
date_published: 2020-08-14T00:00:00Z
date_updated: 2023-08-07T10:15:38Z
day: '14'
doi: 10.1021/jacs.0c06146
extern: '1'
external_id:
  pmid:
  - '32791832'
intvolume: '       142'
issue: '34'
keyword:
- Colloid and Surface Chemistry
- Biochemistry
- General Chemistry
- Catalysis
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1021/jacs.0c06146
month: '08'
oa: 1
oa_version: Published Version
page: 14557-14565
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Improving fatigue resistance of dihydropyrene by encapsulation within a coordination
  cage
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 142
year: '2020'
...
---
_id: '13365'
abstract:
- lang: eng
  text: Photoswitchable molecules are employed for many applications, from the development
    of active materials to the design of stimuli-responsive molecular systems and
    light-powered molecular machines. To fully exploit their potential, we must learn
    ways to control the mechanism and kinetics of their photoinduced isomerization.
    One possible strategy involves confinement of photoresponsive switches such as
    azobenzenes or spiropyrans within crowded molecular environments, which may allow
    control over their light-induced conversion. However, the molecular factors that
    influence and control the switching process under realistic conditions and within
    dynamic molecular regimes often remain difficult to ascertain. As a case study,
    here we have employed molecular models to probe the isomerization of azobenzene
    guests within a Pd(II)-based coordination cage host in water. Atomistic molecular
    dynamics and metadynamics simulations allow us to characterize the flexibility
    of the cage in the solvent, the (rare) guest encapsulation and release events,
    and the relative probability/kinetics of light-induced isomerization of azobenzene
    analogues in these host–guest systems. In this way, we can reconstruct the mechanism
    of azobenzene switching inside the cage cavity and explore key molecular factors
    that may control this event. We obtain a molecular-level insight on the effects
    of crowding and host–guest interactions on azobenzene isomerization. The detailed
    picture elucidated by this study may enable the rational design of photoswitchable
    systems whose reactivity can be controlled via host–guest interactions.
article_processing_charge: No
article_type: original
author:
- first_name: Luca
  full_name: Pesce, Luca
  last_name: Pesce
- first_name: Claudio
  full_name: Perego, Claudio
  last_name: Perego
- first_name: Angela B.
  full_name: Grommet, Angela B.
  last_name: Grommet
- first_name: Rafal
  full_name: Klajn, Rafal
  id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
  last_name: Klajn
- first_name: Giovanni M.
  full_name: Pavan, Giovanni M.
  last_name: Pavan
citation:
  ama: Pesce L, Perego C, Grommet AB, Klajn R, Pavan GM. Molecular factors controlling
    the isomerization of Azobenzenes in the cavity of a flexible coordination cage.
    <i>Journal of the American Chemical Society</i>. 2020;142(21):9792-9802. doi:<a
    href="https://doi.org/10.1021/jacs.0c03444">10.1021/jacs.0c03444</a>
  apa: Pesce, L., Perego, C., Grommet, A. B., Klajn, R., &#38; Pavan, G. M. (2020).
    Molecular factors controlling the isomerization of Azobenzenes in the cavity of
    a flexible coordination cage. <i>Journal of the American Chemical Society</i>.
    American Chemical Society. <a href="https://doi.org/10.1021/jacs.0c03444">https://doi.org/10.1021/jacs.0c03444</a>
  chicago: Pesce, Luca, Claudio Perego, Angela B. Grommet, Rafal Klajn, and Giovanni
    M. Pavan. “Molecular Factors Controlling the Isomerization of Azobenzenes in the
    Cavity of a Flexible Coordination Cage.” <i>Journal of the American Chemical Society</i>.
    American Chemical Society, 2020. <a href="https://doi.org/10.1021/jacs.0c03444">https://doi.org/10.1021/jacs.0c03444</a>.
  ieee: L. Pesce, C. Perego, A. B. Grommet, R. Klajn, and G. M. Pavan, “Molecular
    factors controlling the isomerization of Azobenzenes in the cavity of a flexible
    coordination cage,” <i>Journal of the American Chemical Society</i>, vol. 142,
    no. 21. American Chemical Society, pp. 9792–9802, 2020.
  ista: Pesce L, Perego C, Grommet AB, Klajn R, Pavan GM. 2020. Molecular factors
    controlling the isomerization of Azobenzenes in the cavity of a flexible coordination
    cage. Journal of the American Chemical Society. 142(21), 9792–9802.
  mla: Pesce, Luca, et al. “Molecular Factors Controlling the Isomerization of Azobenzenes
    in the Cavity of a Flexible Coordination Cage.” <i>Journal of the American Chemical
    Society</i>, vol. 142, no. 21, American Chemical Society, 2020, pp. 9792–802,
    doi:<a href="https://doi.org/10.1021/jacs.0c03444">10.1021/jacs.0c03444</a>.
  short: L. Pesce, C. Perego, A.B. Grommet, R. Klajn, G.M. Pavan, Journal of the American
    Chemical Society 142 (2020) 9792–9802.
date_created: 2023-08-01T09:37:12Z
date_published: 2020-04-30T00:00:00Z
date_updated: 2023-08-07T10:18:53Z
day: '30'
doi: 10.1021/jacs.0c03444
extern: '1'
external_id:
  pmid:
  - '32353237'
intvolume: '       142'
issue: '21'
keyword:
- Colloid and Surface Chemistry
- Biochemistry
- General Chemistry
- Catalysis
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1021/jacs.0c03444
month: '04'
oa: 1
oa_version: Published Version
page: 9792-9802
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Molecular factors controlling the isomerization of Azobenzenes in the cavity
  of a flexible coordination cage
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 142
year: '2020'
...
---
OA_place: repository
OA_type: green
_id: '20766'
abstract:
- lang: eng
  text: Reversible catalytic reactions operate under thermodynamic control, and thus,
    establishing a selective catalytic system poses a considerable challenge. Herein,
    we report a reversible transfer hydrocyanation protocol that exhibits high selectivity
    for the thermodynamically less favorable branched isomer. Selectivity is achieved
    by exploiting the lower barrier for C–CN oxidative addition and reductive elimination
    at benzylic positions in the absence of a cocatalytic Lewis acid. Through the
    design of a novel type of HCN donor, a practical, branched-selective, HCN-free
    transfer hydrocyanation was realized. The synthetically useful resolution of a
    mixture of branched and linear nitrile isomers was also demonstrated to underline
    the value of reversible and selective transfer reactions. In a broader context,
    this work demonstrates that high kinetic selectivity can be achieved in reversible
    transfer reactions, thus opening new horizons for their synthetic applications.
article_processing_charge: No
article_type: original
author:
- first_name: Benjamin N.
  full_name: Bhawal, Benjamin N.
  last_name: Bhawal
- first_name: Julia
  full_name: Reisenbauer, Julia
  id: 51d862e9-36ee-11f0-86d3-8534c85a5496
  last_name: Reisenbauer
- first_name: Christian
  full_name: Ehinger, Christian
  last_name: Ehinger
- first_name: Bill
  full_name: Morandi, Bill
  last_name: Morandi
citation:
  ama: 'Bhawal BN, Reisenbauer J, Ehinger C, Morandi B. Overcoming selectivity issues
    in reversible catalysis: A transfer hydrocyanation exhibiting high kinetic control.
    <i>Journal of the American Chemical Society</i>. 2020;142(25):10914-10920. doi:<a
    href="https://doi.org/10.1021/jacs.0c03184">10.1021/jacs.0c03184</a>'
  apa: 'Bhawal, B. N., Reisenbauer, J., Ehinger, C., &#38; Morandi, B. (2020). Overcoming
    selectivity issues in reversible catalysis: A transfer hydrocyanation exhibiting
    high kinetic control. <i>Journal of the American Chemical Society</i>. American
    Chemical Society. <a href="https://doi.org/10.1021/jacs.0c03184">https://doi.org/10.1021/jacs.0c03184</a>'
  chicago: 'Bhawal, Benjamin N., Julia Reisenbauer, Christian Ehinger, and Bill Morandi.
    “Overcoming Selectivity Issues in Reversible Catalysis: A Transfer Hydrocyanation
    Exhibiting High Kinetic Control.” <i>Journal of the American Chemical Society</i>.
    American Chemical Society, 2020. <a href="https://doi.org/10.1021/jacs.0c03184">https://doi.org/10.1021/jacs.0c03184</a>.'
  ieee: 'B. N. Bhawal, J. Reisenbauer, C. Ehinger, and B. Morandi, “Overcoming selectivity
    issues in reversible catalysis: A transfer hydrocyanation exhibiting high kinetic
    control,” <i>Journal of the American Chemical Society</i>, vol. 142, no. 25. American
    Chemical Society, pp. 10914–10920, 2020.'
  ista: 'Bhawal BN, Reisenbauer J, Ehinger C, Morandi B. 2020. Overcoming selectivity
    issues in reversible catalysis: A transfer hydrocyanation exhibiting high kinetic
    control. Journal of the American Chemical Society. 142(25), 10914–10920.'
  mla: 'Bhawal, Benjamin N., et al. “Overcoming Selectivity Issues in Reversible Catalysis:
    A Transfer Hydrocyanation Exhibiting High Kinetic Control.” <i>Journal of the
    American Chemical Society</i>, vol. 142, no. 25, American Chemical Society, 2020,
    pp. 10914–20, doi:<a href="https://doi.org/10.1021/jacs.0c03184">10.1021/jacs.0c03184</a>.'
  short: B.N. Bhawal, J. Reisenbauer, C. Ehinger, B. Morandi, Journal of the American
    Chemical Society 142 (2020) 10914–10920.
date_created: 2025-12-09T14:25:37Z
date_published: 2020-06-01T00:00:00Z
date_updated: 2025-12-16T12:10:08Z
day: '01'
doi: 10.1021/jacs.0c03184
extern: '1'
external_id:
  pmid:
  - '32478515'
intvolume: '       142'
issue: '25'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: 10.26434/chemrxiv.11931633.v1
month: '06'
oa: 1
oa_version: Preprint
page: 10914-10920
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Overcoming selectivity issues in reversible catalysis: A transfer hydrocyanation
  exhibiting high kinetic control'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 142
year: '2020'
...
---
OA_type: closed access
_id: '17904'
abstract:
- lang: eng
  text: The creation of stable molecular monolayers on metallic surfaces is a fundamental
    challenge of surface chemistry. N-Heterocyclic carbenes (NHCs) were recently shown
    to form self-assembled monolayers that are significantly more stable than the
    traditional thiols on Au system. Here we theoretically and experimentally demonstrate
    that the smallest cyclic carbene, cyclopropenylidene, binds even more strongly
    than NHCs to Au surfaces without altering the surface structure. We deposit bis(diisopropylamino)cyclopropenylidene
    (BAC) on Au(111) using the molecular adduct BAC–CO2 as a precursor and determine
    the structure, geometry, and behavior of the surface-bound molecules through high-resolution
    X-ray photoelectron spectroscopy, atomic force microscopy, and scanning tunneling
    microscopy. Our experiments are supported by density functional theory calculations
    of the molecular binding energy of BAC on Au(111) and its electronic structure.
    Our work is the first demonstration of surface modification with a stable carbene
    other than NHC; more broadly, it drives further exploration of various carbenes
    on metal surfaces.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Evan A.
  full_name: Doud, Evan A.
  last_name: Doud
- first_name: Rachel L.
  full_name: Starr, Rachel L.
  last_name: Starr
- first_name: Gregor
  full_name: Kladnik, Gregor
  last_name: Kladnik
- first_name: Anastasia
  full_name: Voevodin, Anastasia
  last_name: Voevodin
- first_name: Enrique
  full_name: Montes, Enrique
  last_name: Montes
- first_name: Narendra P.
  full_name: Arasu, Narendra P.
  last_name: Arasu
- first_name: Yaping
  full_name: Zang, Yaping
  last_name: Zang
- first_name: Percy
  full_name: Zahl, Percy
  last_name: Zahl
- first_name: Alberto
  full_name: Morgante, Alberto
  last_name: Morgante
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
- first_name: Héctor
  full_name: Vázquez, Héctor
  last_name: Vázquez
- first_name: Dean
  full_name: Cvetko, Dean
  last_name: Cvetko
- first_name: Xavier
  full_name: Roy, Xavier
  last_name: Roy
citation:
  ama: Doud EA, Starr RL, Kladnik G, et al. Cyclopropenylidenes as strong carbene
    anchoring groups on Au surfaces. <i>Journal of the American Chemical Society</i>.
    2020;142(47):19902-19906. doi:<a href="https://doi.org/10.1021/jacs.0c10743">10.1021/jacs.0c10743</a>
  apa: Doud, E. A., Starr, R. L., Kladnik, G., Voevodin, A., Montes, E., Arasu, N.
    P., … Roy, X. (2020). Cyclopropenylidenes as strong carbene anchoring groups on
    Au surfaces. <i>Journal of the American Chemical Society</i>. American Chemical
    Society. <a href="https://doi.org/10.1021/jacs.0c10743">https://doi.org/10.1021/jacs.0c10743</a>
  chicago: Doud, Evan A., Rachel L. Starr, Gregor Kladnik, Anastasia Voevodin, Enrique
    Montes, Narendra P. Arasu, Yaping Zang, et al. “Cyclopropenylidenes as Strong
    Carbene Anchoring Groups on Au Surfaces.” <i>Journal of the American Chemical
    Society</i>. American Chemical Society, 2020. <a href="https://doi.org/10.1021/jacs.0c10743">https://doi.org/10.1021/jacs.0c10743</a>.
  ieee: E. A. Doud <i>et al.</i>, “Cyclopropenylidenes as strong carbene anchoring
    groups on Au surfaces,” <i>Journal of the American Chemical Society</i>, vol.
    142, no. 47. American Chemical Society, pp. 19902–19906, 2020.
  ista: Doud EA, Starr RL, Kladnik G, Voevodin A, Montes E, Arasu NP, Zang Y, Zahl
    P, Morgante A, Venkataraman L, Vázquez H, Cvetko D, Roy X. 2020. Cyclopropenylidenes
    as strong carbene anchoring groups on Au surfaces. Journal of the American Chemical
    Society. 142(47), 19902–19906.
  mla: Doud, Evan A., et al. “Cyclopropenylidenes as Strong Carbene Anchoring Groups
    on Au Surfaces.” <i>Journal of the American Chemical Society</i>, vol. 142, no.
    47, American Chemical Society, 2020, pp. 19902–06, doi:<a href="https://doi.org/10.1021/jacs.0c10743">10.1021/jacs.0c10743</a>.
  short: E.A. Doud, R.L. Starr, G. Kladnik, A. Voevodin, E. Montes, N.P. Arasu, Y.
    Zang, P. Zahl, A. Morgante, L. Venkataraman, H. Vázquez, D. Cvetko, X. Roy, Journal
    of the American Chemical Society 142 (2020) 19902–19906.
date_created: 2024-09-09T07:13:45Z
date_published: 2020-11-11T00:00:00Z
date_updated: 2024-12-10T10:34:58Z
day: '11'
doi: 10.1021/jacs.0c10743
extern: '1'
external_id:
  pmid:
  - '33175526'
intvolume: '       142'
issue: '47'
language:
- iso: eng
month: '11'
oa_version: None
page: 19902-19906
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Cyclopropenylidenes as strong carbene anchoring groups on Au surfaces
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 142
year: '2020'
...
---
OA_type: closed access
_id: '17909'
abstract:
- lang: eng
  text: Atomically precise clusters can be used to create single-electron devices
    wherein a single redox-active cluster is connected to two macroscopic electrodes
    via anchoring ligands. Unlike single-electron devices comprising nanocrystals,
    these cluster-based devices can be fabricated with atomic precision. This affords
    an unprecedented level of control over the device properties. Herein, we design
    a series of cobalt chalcogenide clusters with varying ligand geometries and core
    nuclearities to control their current–voltage (I–V) characteristics in a scanning
    tunneling microscope-based break junction (STM-BJ) device. First, the device geometry
    is modified by precisely positioning junction-anchoring ligands on the surface
    of the cluster. We show that the I–V characteristics are independent of ligand
    placement, confirming a sequential, single-electron tunneling mechanism. Next,
    we chemically fuse two clusters to realize a larger cluster dimer that behaves
    as a single electronic unit, possessing a smaller reorganization energy and more
    accessible redox states than the monomeric analogues. As a result, dimer-based
    devices exhibit significantly higher currents and can even be pushed to current
    saturation at high bias. Owing to these controllable properties, single-cluster
    junctions serve as an excellent platform for exploring incoherent charge transport
    processes at the nanoscale. With this understanding, as well as properties such
    as nonlinear I–V characteristics and rectification, these molecular clusters may
    function as conductive inorganic nodes in new devices and materials.
article_processing_charge: No
article_type: original
author:
- first_name: Suman
  full_name: Gunasekaran, Suman
  last_name: Gunasekaran
- first_name: Douglas A.
  full_name: Reed, Douglas A.
  last_name: Reed
- first_name: Daniel W.
  full_name: Paley, Daniel W.
  last_name: Paley
- first_name: Amymarie K.
  full_name: Bartholomew, Amymarie K.
  last_name: Bartholomew
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
- first_name: Michael L.
  full_name: Steigerwald, Michael L.
  last_name: Steigerwald
- first_name: Xavier
  full_name: Roy, Xavier
  last_name: Roy
- first_name: Colin
  full_name: Nuckolls, Colin
  last_name: Nuckolls
citation:
  ama: Gunasekaran S, Reed DA, Paley DW, et al. Single-electron currents in designer
    single-cluster devices. <i>Journal of the American Chemical Society</i>. 2020;142(35):14924-14932.
    doi:<a href="https://doi.org/10.1021/jacs.0c04970">10.1021/jacs.0c04970</a>
  apa: Gunasekaran, S., Reed, D. A., Paley, D. W., Bartholomew, A. K., Venkataraman,
    L., Steigerwald, M. L., … Nuckolls, C. (2020). Single-electron currents in designer
    single-cluster devices. <i>Journal of the American Chemical Society</i>. American
    Chemical Society. <a href="https://doi.org/10.1021/jacs.0c04970">https://doi.org/10.1021/jacs.0c04970</a>
  chicago: Gunasekaran, Suman, Douglas A. Reed, Daniel W. Paley, Amymarie K. Bartholomew,
    Latha Venkataraman, Michael L. Steigerwald, Xavier Roy, and Colin Nuckolls. “Single-Electron
    Currents in Designer Single-Cluster Devices.” <i>Journal of the American Chemical
    Society</i>. American Chemical Society, 2020. <a href="https://doi.org/10.1021/jacs.0c04970">https://doi.org/10.1021/jacs.0c04970</a>.
  ieee: S. Gunasekaran <i>et al.</i>, “Single-electron currents in designer single-cluster
    devices,” <i>Journal of the American Chemical Society</i>, vol. 142, no. 35. American
    Chemical Society, pp. 14924–14932, 2020.
  ista: Gunasekaran S, Reed DA, Paley DW, Bartholomew AK, Venkataraman L, Steigerwald
    ML, Roy X, Nuckolls C. 2020. Single-electron currents in designer single-cluster
    devices. Journal of the American Chemical Society. 142(35), 14924–14932.
  mla: Gunasekaran, Suman, et al. “Single-Electron Currents in Designer Single-Cluster
    Devices.” <i>Journal of the American Chemical Society</i>, vol. 142, no. 35, American
    Chemical Society, 2020, pp. 14924–32, doi:<a href="https://doi.org/10.1021/jacs.0c04970">10.1021/jacs.0c04970</a>.
  short: S. Gunasekaran, D.A. Reed, D.W. Paley, A.K. Bartholomew, L. Venkataraman,
    M.L. Steigerwald, X. Roy, C. Nuckolls, Journal of the American Chemical Society
    142 (2020) 14924–14932.
date_created: 2024-09-09T07:19:56Z
date_published: 2020-08-18T00:00:00Z
date_updated: 2024-12-10T12:04:31Z
day: '18'
doi: 10.1021/jacs.0c04970
extern: '1'
external_id:
  pmid:
  - '32809814'
intvolume: '       142'
issue: '35'
language:
- iso: eng
month: '08'
oa_version: None
page: 14924-14932
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Single-electron currents in designer single-cluster devices
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 142
year: '2020'
...
---
OA_type: closed access
_id: '17912'
abstract:
- lang: eng
  text: Aryl halides are ubiquitous functional groups in organic chemistry, yet despite
    their obvious appeal as surface-binding linkers and as precursors for controlled
    graphene nanoribbon synthesis, they have seldom been used as such in molecular
    electronics. The confusion regarding the bonding of aryl iodides to Au electrodes
    is a case in point, with ambiguous reports of both dative Au–I and covalent Au–C
    contacts. Here we form single-molecule junctions with a series of oligophenylene
    molecular wires terminated asymmetrically with iodine and thiomethyl to show that
    the dative Au–I contact has a lower conductance than the covalent Au–C interaction,
    which we propose occurs via an in situ oxidative addition reaction at the Au surface.
    Furthermore, we confirm the formation of the Au–C bond by measuring an analogous
    series of molecules prepared ex situ with the complex AuI(PPh3) in place of the
    iodide. Density functional theory-based transport calculations support our experimental
    observations that Au–C linkages have higher conductance than Au–I linkages. Finally,
    we demonstrate selective promotion of the Au–C bond formation by controlling the
    bias applied across the junction. In addition to establishing the different binding
    modes of aryl iodides, our results chart a path to actively controlling oxidative
    addition on an Au surface using an applied bias.
article_processing_charge: No
article_type: original
author:
- first_name: Rachel L.
  full_name: Starr, Rachel L.
  last_name: Starr
- first_name: Tianren
  full_name: Fu, Tianren
  last_name: Fu
- first_name: Evan A.
  full_name: Doud, Evan A.
  last_name: Doud
- first_name: Ilana
  full_name: Stone, Ilana
  last_name: Stone
- first_name: Xavier
  full_name: Roy, Xavier
  last_name: Roy
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
citation:
  ama: Starr RL, Fu T, Doud EA, Stone I, Roy X, Venkataraman L. Gold–carbon contacts
    from oxidative addition of aryl iodides. <i>Journal of the American Chemical Society</i>.
    2020;142(15):7128-7133. doi:<a href="https://doi.org/10.1021/jacs.0c01466">10.1021/jacs.0c01466</a>
  apa: Starr, R. L., Fu, T., Doud, E. A., Stone, I., Roy, X., &#38; Venkataraman,
    L. (2020). Gold–carbon contacts from oxidative addition of aryl iodides. <i>Journal
    of the American Chemical Society</i>. American Chemical Society. <a href="https://doi.org/10.1021/jacs.0c01466">https://doi.org/10.1021/jacs.0c01466</a>
  chicago: Starr, Rachel L., Tianren Fu, Evan A. Doud, Ilana Stone, Xavier Roy, and
    Latha Venkataraman. “Gold–Carbon Contacts from Oxidative Addition of Aryl Iodides.”
    <i>Journal of the American Chemical Society</i>. American Chemical Society, 2020.
    <a href="https://doi.org/10.1021/jacs.0c01466">https://doi.org/10.1021/jacs.0c01466</a>.
  ieee: R. L. Starr, T. Fu, E. A. Doud, I. Stone, X. Roy, and L. Venkataraman, “Gold–carbon
    contacts from oxidative addition of aryl iodides,” <i>Journal of the American
    Chemical Society</i>, vol. 142, no. 15. American Chemical Society, pp. 7128–7133,
    2020.
  ista: Starr RL, Fu T, Doud EA, Stone I, Roy X, Venkataraman L. 2020. Gold–carbon
    contacts from oxidative addition of aryl iodides. Journal of the American Chemical
    Society. 142(15), 7128–7133.
  mla: Starr, Rachel L., et al. “Gold–Carbon Contacts from Oxidative Addition of Aryl
    Iodides.” <i>Journal of the American Chemical Society</i>, vol. 142, no. 15, American
    Chemical Society, 2020, pp. 7128–33, doi:<a href="https://doi.org/10.1021/jacs.0c01466">10.1021/jacs.0c01466</a>.
  short: R.L. Starr, T. Fu, E.A. Doud, I. Stone, X. Roy, L. Venkataraman, Journal
    of the American Chemical Society 142 (2020) 7128–7133.
date_created: 2024-09-09T07:22:26Z
date_published: 2020-03-26T00:00:00Z
date_updated: 2024-12-10T12:20:47Z
day: '26'
doi: 10.1021/jacs.0c01466
extern: '1'
external_id:
  pmid:
  - '32212683'
intvolume: '       142'
issue: '15'
language:
- iso: eng
month: '03'
oa_version: None
page: 7128-7133
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Gold–carbon contacts from oxidative addition of aryl iodides
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 142
year: '2020'
...
---
_id: '8040'
abstract:
- lang: eng
  text: The mitochondrial respiratory chain, formed by five protein complexes, utilizes
    energy from catabolic processes to synthesize ATP. Complex I, the first and the
    largest protein complex of the chain, harvests electrons from NADH to reduce quinone,
    while pumping protons across the mitochondrial membrane. Detailed knowledge of
    the working principle of such coupled charge-transfer processes remains, however,
    fragmentary due to bottlenecks in understanding redox-driven conformational transitions
    and their interplay with the hydrated proton pathways. Complex I from Thermus
    thermophilus encases 16 subunits with nine iron–sulfur clusters, reduced by electrons
    from NADH. Here, employing the latest crystal structure of T. thermophilus complex
    I, we have used microsecond-scale molecular dynamics simulations to study the
    chemo-mechanical coupling between redox changes of the iron–sulfur clusters and
    conformational transitions across complex I. First, we identify the redox switches
    within complex I, which allosterically couple the dynamics of the quinone binding
    pocket to the site of NADH reduction. Second, our free-energy calculations reveal
    that the affinity of the quinone, specifically menaquinone, for the binding-site
    is higher than that of its reduced, menaquinol form—a design essential for menaquinol
    release. Remarkably, the barriers to diffusive menaquinone dynamics are lesser
    than that of the more ubiquitous ubiquinone, and the naphthoquinone headgroup
    of the former furnishes stronger binding interactions with the pocket, favoring
    menaquinone for charge transport in T. thermophilus. Our computations are consistent
    with experimentally validated mutations and hierarchize the key residues into
    three functional classes, identifying new mutation targets. Third, long-range
    hydrogen-bond networks connecting the quinone-binding site to the transmembrane
    subunits are found to be responsible for proton pumping. Put together, the simulations
    reveal the molecular design principles linking redox reactions to quinone turnover
    to proton translocation in complex I.
article_processing_charge: No
article_type: original
author:
- first_name: Chitrak
  full_name: Gupta, Chitrak
  last_name: Gupta
- first_name: Umesh
  full_name: Khaniya, Umesh
  last_name: Khaniya
- first_name: Chun Kit
  full_name: Chan, Chun Kit
  last_name: Chan
- first_name: Francois
  full_name: Dehez, Francois
  last_name: Dehez
- first_name: Mrinal
  full_name: Shekhar, Mrinal
  last_name: Shekhar
- first_name: M. R.
  full_name: Gunner, M. R.
  last_name: Gunner
- first_name: Leonid A
  full_name: Sazanov, Leonid A
  id: 338D39FE-F248-11E8-B48F-1D18A9856A87
  last_name: Sazanov
  orcid: 0000-0002-0977-7989
- first_name: Christophe
  full_name: Chipot, Christophe
  last_name: Chipot
- first_name: Abhishek
  full_name: Singharoy, Abhishek
  last_name: Singharoy
citation:
  ama: Gupta C, Khaniya U, Chan CK, et al. Charge transfer and chemo-mechanical coupling
    in respiratory complex I. <i>Journal of the American Chemical Society</i>. 2020;142(20):9220-9230.
    doi:<a href="https://doi.org/10.1021/jacs.9b13450">10.1021/jacs.9b13450</a>
  apa: Gupta, C., Khaniya, U., Chan, C. K., Dehez, F., Shekhar, M., Gunner, M. R.,
    … Singharoy, A. (2020). Charge transfer and chemo-mechanical coupling in respiratory
    complex I. <i>Journal of the American Chemical Society</i>. American Chemical
    Society. <a href="https://doi.org/10.1021/jacs.9b13450">https://doi.org/10.1021/jacs.9b13450</a>
  chicago: Gupta, Chitrak, Umesh Khaniya, Chun Kit Chan, Francois Dehez, Mrinal Shekhar,
    M. R. Gunner, Leonid A Sazanov, Christophe Chipot, and Abhishek Singharoy. “Charge
    Transfer and Chemo-Mechanical Coupling in Respiratory Complex I.” <i>Journal of
    the American Chemical Society</i>. American Chemical Society, 2020. <a href="https://doi.org/10.1021/jacs.9b13450">https://doi.org/10.1021/jacs.9b13450</a>.
  ieee: C. Gupta <i>et al.</i>, “Charge transfer and chemo-mechanical coupling in
    respiratory complex I,” <i>Journal of the American Chemical Society</i>, vol.
    142, no. 20. American Chemical Society, pp. 9220–9230, 2020.
  ista: Gupta C, Khaniya U, Chan CK, Dehez F, Shekhar M, Gunner MR, Sazanov LA, Chipot
    C, Singharoy A. 2020. Charge transfer and chemo-mechanical coupling in respiratory
    complex I. Journal of the American Chemical Society. 142(20), 9220–9230.
  mla: Gupta, Chitrak, et al. “Charge Transfer and Chemo-Mechanical Coupling in Respiratory
    Complex I.” <i>Journal of the American Chemical Society</i>, vol. 142, no. 20,
    American Chemical Society, 2020, pp. 9220–30, doi:<a href="https://doi.org/10.1021/jacs.9b13450">10.1021/jacs.9b13450</a>.
  short: C. Gupta, U. Khaniya, C.K. Chan, F. Dehez, M. Shekhar, M.R. Gunner, L.A.
    Sazanov, C. Chipot, A. Singharoy, Journal of the American Chemical Society 142
    (2020) 9220–9230.
corr_author: '1'
date_created: 2020-06-29T07:59:35Z
date_published: 2020-05-20T00:00:00Z
date_updated: 2026-07-06T12:16:34Z
day: '20'
department:
- _id: LeSa
doi: 10.1021/jacs.9b13450
external_id:
  isi:
  - '000537415600020'
  pmid:
  - '32347721'
intvolume: '       142'
isi: 1
issue: '20'
language:
- iso: eng
month: '05'
oa_version: None
page: 9220-9230
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
related_material:
  record:
  - id: '9878'
    relation: research_data
    status: public
  - id: '9326'
    relation: research_data
    status: public
  - id: '9713'
    relation: research_data
    status: public
scopus_import: '1'
status: public
title: Charge transfer and chemo-mechanical coupling in respiratory complex I
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 142
year: '2020'
...
---
_id: '13373'
abstract:
- lang: eng
  text: The reversible photoisomerization of azobenzene has been utilized to construct
    a plethora of systems in which optical, electronic, catalytic, and other properties
    can be controlled by light. However, owing to azobenzene’s hydrophobic nature,
    most of these examples have been realized only in organic solvents, and systems
    operating in water are relatively scarce. Here, we show that by coadsorbing the
    inherently hydrophobic azobenzenes with water-solubilizing ligands on the same
    nanoparticulate platforms, it is possible to render them essentially water-soluble.
    To this end, we developed a modified nanoparticle functionalization procedure
    allowing us to precisely fine-tune the amount of azobenzene on the functionalized
    nanoparticles. Molecular dynamics simulations helped us to identify two distinct
    supramolecular architectures (depending on the length of the background ligand)
    on these nanoparticles, which can explain their excellent aqueous solubilities.
    Azobenzenes adsorbed on these water-soluble nanoparticles exhibit highly reversible
    photoisomerization upon exposure to UV and visible light. Importantly, the mixed-monolayer
    approach allowed us to systematically investigate how the background ligand affects
    the switching properties of azobenzene. We found that the nature of the background
    ligand has a profound effect on the kinetics of azobenzene switching. For example,
    a hydroxy-terminated background ligand is capable of accelerating the back-isomerization
    reaction by more than 6000-fold. These results pave the way toward the development
    of novel light-responsive nanomaterials operating in aqueous media and, in the
    long run, in biological environments.
article_processing_charge: No
article_type: original
author:
- first_name: Zonglin
  full_name: Chu, Zonglin
  last_name: Chu
- first_name: Yanxiao
  full_name: Han, Yanxiao
  last_name: Han
- first_name: Tong
  full_name: Bian, Tong
  last_name: Bian
- first_name: Soumen
  full_name: De, Soumen
  last_name: De
- first_name: Petr
  full_name: Král, Petr
  last_name: Král
- first_name: Rafal
  full_name: Klajn, Rafal
  id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
  last_name: Klajn
citation:
  ama: Chu Z, Han Y, Bian T, De S, Král P, Klajn R. Supramolecular control of azobenzene
    switching on nanoparticles. <i>Journal of the American Chemical Society</i>. 2019;141(5):1949-1960.
    doi:<a href="https://doi.org/10.1021/jacs.8b09638">10.1021/jacs.8b09638</a>
  apa: Chu, Z., Han, Y., Bian, T., De, S., Král, P., &#38; Klajn, R. (2019). Supramolecular
    control of azobenzene switching on nanoparticles. <i>Journal of the American Chemical
    Society</i>. American Chemical Society. <a href="https://doi.org/10.1021/jacs.8b09638">https://doi.org/10.1021/jacs.8b09638</a>
  chicago: Chu, Zonglin, Yanxiao Han, Tong Bian, Soumen De, Petr Král, and Rafal Klajn.
    “Supramolecular Control of Azobenzene Switching on Nanoparticles.” <i>Journal
    of the American Chemical Society</i>. American Chemical Society, 2019. <a href="https://doi.org/10.1021/jacs.8b09638">https://doi.org/10.1021/jacs.8b09638</a>.
  ieee: Z. Chu, Y. Han, T. Bian, S. De, P. Král, and R. Klajn, “Supramolecular control
    of azobenzene switching on nanoparticles,” <i>Journal of the American Chemical
    Society</i>, vol. 141, no. 5. American Chemical Society, pp. 1949–1960, 2019.
  ista: Chu Z, Han Y, Bian T, De S, Král P, Klajn R. 2019. Supramolecular control
    of azobenzene switching on nanoparticles. Journal of the American Chemical Society.
    141(5), 1949–1960.
  mla: Chu, Zonglin, et al. “Supramolecular Control of Azobenzene Switching on Nanoparticles.”
    <i>Journal of the American Chemical Society</i>, vol. 141, no. 5, American Chemical
    Society, 2019, pp. 1949–60, doi:<a href="https://doi.org/10.1021/jacs.8b09638">10.1021/jacs.8b09638</a>.
  short: Z. Chu, Y. Han, T. Bian, S. De, P. Král, R. Klajn, Journal of the American
    Chemical Society 141 (2019) 1949–1960.
date_created: 2023-08-01T09:39:19Z
date_published: 2019-02-06T00:00:00Z
date_updated: 2024-10-14T12:14:23Z
day: '06'
doi: 10.1021/jacs.8b09638
extern: '1'
external_id:
  pmid:
  - '30595017'
intvolume: '       141'
issue: '5'
keyword:
- Colloid and Surface Chemistry
- Biochemistry
- General Chemistry
- Catalysis
language:
- iso: eng
month: '02'
oa_version: Published Version
page: 1949-1960
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Supramolecular control of azobenzene switching on nanoparticles
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 141
year: '2019'
...
---
_id: '8408'
abstract:
- lang: eng
  text: Aromatic residues are located at structurally important sites of many proteins.
    Probing their interactions and dynamics can provide important functional insight
    but is challenging in large proteins. Here, we introduce approaches to characterize
    dynamics of phenylalanine residues using 1H-detected fast magic-angle spinning
    (MAS) NMR combined with a tailored isotope-labeling scheme. Our approach yields
    isolated two-spin systems that are ideally suited for artefact-free dynamics measurements,
    and allows probing motions effectively without molecular-weight limitations. The
    application to the TET2 enzyme assembly of ~0.5 MDa size, the currently largest
    protein assigned by MAS NMR, provides insights into motions occurring on a wide
    range of time scales (ps-ms). We quantitatively probe ring flip motions, and show
    the temperature dependence by MAS NMR measurements down to 100 K. Interestingly,
    favorable line widths are observed down to 100 K, with potential implications
    for DNP NMR. Furthermore, we report the first 13C R1ρ MAS NMR relaxation-dispersion
    measurements and detect structural excursions occurring on a microsecond time
    scale in the entry pore to the catalytic chamber and at a trimer interface that
    was proposed as exit pore. We show that the labeling scheme with deuteration at
    ca. 50 kHz MAS provides superior resolution compared to 100 kHz MAS experiments
    with protonated, uniformly 13C-labeled samples.
article_processing_charge: No
article_type: original
author:
- first_name: Diego F.
  full_name: Gauto, Diego F.
  last_name: Gauto
- first_name: Pavel
  full_name: Macek, Pavel
  last_name: Macek
- first_name: Alessandro
  full_name: Barducci, Alessandro
  last_name: Barducci
- first_name: Hugo
  full_name: Fraga, Hugo
  last_name: Fraga
- first_name: Audrey
  full_name: Hessel, Audrey
  last_name: Hessel
- first_name: Tsutomu
  full_name: Terauchi, Tsutomu
  last_name: Terauchi
- first_name: David
  full_name: Gajan, David
  last_name: Gajan
- first_name: Yohei
  full_name: Miyanoiri, Yohei
  last_name: Miyanoiri
- first_name: Jerome
  full_name: Boisbouvier, Jerome
  last_name: Boisbouvier
- first_name: Roman
  full_name: Lichtenecker, Roman
  last_name: Lichtenecker
- first_name: Masatsune
  full_name: Kainosho, Masatsune
  last_name: Kainosho
- first_name: Paul
  full_name: Schanda, Paul
  id: 7B541462-FAF6-11E9-A490-E8DFE5697425
  last_name: Schanda
  orcid: 0000-0002-9350-7606
citation:
  ama: Gauto DF, Macek P, Barducci A, et al. Aromatic ring dynamics, thermal activation,
    and transient conformations of a 468 kDa enzyme by specific 1H–13C labeling and
    fast magic-angle spinning NMR. <i>Journal of the American Chemical Society</i>.
    2019;141(28):11183-11195. doi:<a href="https://doi.org/10.1021/jacs.9b04219">10.1021/jacs.9b04219</a>
  apa: Gauto, D. F., Macek, P., Barducci, A., Fraga, H., Hessel, A., Terauchi, T.,
    … Schanda, P. (2019). Aromatic ring dynamics, thermal activation, and transient
    conformations of a 468 kDa enzyme by specific 1H–13C labeling and fast magic-angle
    spinning NMR. <i>Journal of the American Chemical Society</i>. American Chemical
    Society. <a href="https://doi.org/10.1021/jacs.9b04219">https://doi.org/10.1021/jacs.9b04219</a>
  chicago: Gauto, Diego F., Pavel Macek, Alessandro Barducci, Hugo Fraga, Audrey Hessel,
    Tsutomu Terauchi, David Gajan, et al. “Aromatic Ring Dynamics, Thermal Activation,
    and Transient Conformations of a 468 KDa Enzyme by Specific 1H–13C Labeling and
    Fast Magic-Angle Spinning NMR.” <i>Journal of the American Chemical Society</i>.
    American Chemical Society, 2019. <a href="https://doi.org/10.1021/jacs.9b04219">https://doi.org/10.1021/jacs.9b04219</a>.
  ieee: D. F. Gauto <i>et al.</i>, “Aromatic ring dynamics, thermal activation, and
    transient conformations of a 468 kDa enzyme by specific 1H–13C labeling and fast
    magic-angle spinning NMR,” <i>Journal of the American Chemical Society</i>, vol.
    141, no. 28. American Chemical Society, pp. 11183–11195, 2019.
  ista: Gauto DF, Macek P, Barducci A, Fraga H, Hessel A, Terauchi T, Gajan D, Miyanoiri
    Y, Boisbouvier J, Lichtenecker R, Kainosho M, Schanda P. 2019. Aromatic ring dynamics,
    thermal activation, and transient conformations of a 468 kDa enzyme by specific
    1H–13C labeling and fast magic-angle spinning NMR. Journal of the American Chemical
    Society. 141(28), 11183–11195.
  mla: Gauto, Diego F., et al. “Aromatic Ring Dynamics, Thermal Activation, and Transient
    Conformations of a 468 KDa Enzyme by Specific 1H–13C Labeling and Fast Magic-Angle
    Spinning NMR.” <i>Journal of the American Chemical Society</i>, vol. 141, no.
    28, American Chemical Society, 2019, pp. 11183–95, doi:<a href="https://doi.org/10.1021/jacs.9b04219">10.1021/jacs.9b04219</a>.
  short: D.F. Gauto, P. Macek, A. Barducci, H. Fraga, A. Hessel, T. Terauchi, D. Gajan,
    Y. Miyanoiri, J. Boisbouvier, R. Lichtenecker, M. Kainosho, P. Schanda, Journal
    of the American Chemical Society 141 (2019) 11183–11195.
date_created: 2020-09-17T10:29:00Z
date_published: 2019-06-14T00:00:00Z
date_updated: 2021-01-12T08:19:04Z
day: '14'
doi: 10.1021/jacs.9b04219
extern: '1'
external_id:
  pmid:
  - '31199882'
intvolume: '       141'
issue: '28'
keyword:
- Colloid and Surface Chemistry
- Biochemistry
- General Chemistry
- Catalysis
language:
- iso: eng
month: '06'
oa_version: Submitted Version
page: 11183-11195
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
  issn:
  - 0002-7863
  - 1520-5126
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
status: public
title: Aromatic ring dynamics, thermal activation, and transient conformations of
  a 468 kDa enzyme by specific 1H–13C labeling and fast magic-angle spinning NMR
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 141
year: '2019'
...
---
_id: '8413'
abstract:
- lang: eng
  text: NMR relaxation dispersion methods provide a holistic way to observe microsecond
    time-scale protein backbone motion both in solution and in the solid state. Different
    nuclei (1H and 15N) and different relaxation dispersion techniques (Bloch–McConnell
    and near-rotary-resonance) give complementary information about the amplitudes
    and time scales of the conformational dynamics and provide comprehensive insights
    into the mechanistic details of the structural rearrangements. In this paper,
    we exemplify the benefits of the combination of various solution- and solid-state
    relaxation dispersion methods on a microcrystalline protein (α-spectrin SH3 domain),
    for which we are able to identify and model the functionally relevant conformational
    rearrangements around the ligand recognition loop occurring on multiple microsecond
    time scales. The observed loop motions suggest that the SH3 domain exists in a
    binding-competent conformation in dynamic equilibrium with a sterically impaired
    ground-state conformation both in solution and in crystalline form. This inherent
    plasticity between the interconverting macrostates is compatible with a conformational-preselection
    model and provides new insights into the recognition mechanisms of SH3 domains.
article_processing_charge: No
article_type: original
author:
- first_name: Petra
  full_name: Rovó, Petra
  last_name: Rovó
- first_name: Colin A.
  full_name: Smith, Colin A.
  last_name: Smith
- first_name: Diego
  full_name: Gauto, Diego
  last_name: Gauto
- first_name: Bert L.
  full_name: de Groot, Bert L.
  last_name: de Groot
- first_name: Paul
  full_name: Schanda, Paul
  id: 7B541462-FAF6-11E9-A490-E8DFE5697425
  last_name: Schanda
  orcid: 0000-0002-9350-7606
- first_name: Rasmus
  full_name: Linser, Rasmus
  last_name: Linser
citation:
  ama: Rovó P, Smith CA, Gauto D, de Groot BL, Schanda P, Linser R. Mechanistic insights
    into microsecond time-scale motion of solid proteins using complementary 15N and
    1H relaxation dispersion techniques. <i>Journal of the American Chemical Society</i>.
    2019;141(2):858-869. doi:<a href="https://doi.org/10.1021/jacs.8b09258">10.1021/jacs.8b09258</a>
  apa: Rovó, P., Smith, C. A., Gauto, D., de Groot, B. L., Schanda, P., &#38; Linser,
    R. (2019). Mechanistic insights into microsecond time-scale motion of solid proteins
    using complementary 15N and 1H relaxation dispersion techniques. <i>Journal of
    the American Chemical Society</i>. American Chemical Society. <a href="https://doi.org/10.1021/jacs.8b09258">https://doi.org/10.1021/jacs.8b09258</a>
  chicago: Rovó, Petra, Colin A. Smith, Diego Gauto, Bert L. de Groot, Paul Schanda,
    and Rasmus Linser. “Mechanistic Insights into Microsecond Time-Scale Motion of
    Solid Proteins Using Complementary 15N and 1H Relaxation Dispersion Techniques.”
    <i>Journal of the American Chemical Society</i>. American Chemical Society, 2019.
    <a href="https://doi.org/10.1021/jacs.8b09258">https://doi.org/10.1021/jacs.8b09258</a>.
  ieee: P. Rovó, C. A. Smith, D. Gauto, B. L. de Groot, P. Schanda, and R. Linser,
    “Mechanistic insights into microsecond time-scale motion of solid proteins using
    complementary 15N and 1H relaxation dispersion techniques,” <i>Journal of the
    American Chemical Society</i>, vol. 141, no. 2. American Chemical Society, pp.
    858–869, 2019.
  ista: Rovó P, Smith CA, Gauto D, de Groot BL, Schanda P, Linser R. 2019. Mechanistic
    insights into microsecond time-scale motion of solid proteins using complementary
    15N and 1H relaxation dispersion techniques. Journal of the American Chemical
    Society. 141(2), 858–869.
  mla: Rovó, Petra, et al. “Mechanistic Insights into Microsecond Time-Scale Motion
    of Solid Proteins Using Complementary 15N and 1H Relaxation Dispersion Techniques.”
    <i>Journal of the American Chemical Society</i>, vol. 141, no. 2, American Chemical
    Society, 2019, pp. 858–69, doi:<a href="https://doi.org/10.1021/jacs.8b09258">10.1021/jacs.8b09258</a>.
  short: P. Rovó, C.A. Smith, D. Gauto, B.L. de Groot, P. Schanda, R. Linser, Journal
    of the American Chemical Society 141 (2019) 858–869.
date_created: 2020-09-17T10:29:50Z
date_published: 2019-01-08T00:00:00Z
date_updated: 2021-01-12T08:19:07Z
day: '08'
doi: 10.1021/jacs.8b09258
extern: '1'
external_id:
  pmid:
  - '30620186'
intvolume: '       141'
issue: '2'
keyword:
- Colloid and Surface Chemistry
- Biochemistry
- General Chemistry
- Catalysis
language:
- iso: eng
month: '01'
oa_version: Submitted Version
page: 858-869
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
  issn:
  - 0002-7863
  - 1520-5126
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
status: public
title: Mechanistic insights into microsecond time-scale motion of solid proteins using
  complementary 15N and 1H relaxation dispersion techniques
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 141
year: '2019'
...
---
_id: '6586'
abstract:
- lang: eng
  text: The bottom-up assembly of colloidal nanocrystals is a versatile methodology
    to produce composite nanomaterials with precisely tuned electronic properties.
    Beyond the synthetic control over crystal domain size, shape, crystal phase, and
    composition, solution-processed nanocrystals allow exquisite surface engineering.
    This provides additional means to modulate the nanomaterial characteristics and
    particularly its electronic transport properties. For instance, inorganic surface
    ligands can be used to tune the type and concentration of majority carriers or
    to modify the electronic band structure. Herein, we report the thermoelectric
    properties of SnTe nanocomposites obtained from the consolidation of surface-engineered
    SnTe nanocrystals into macroscopic pellets. A CdSe-based ligand is selected to
    (i) converge the light and heavy bands through partial Cd alloying and (ii) generate
    CdSe nanoinclusions as a secondary phase within the SnTe matrix, thereby reducing
    the thermal conductivity. These SnTe-CdSe nanocomposites possess thermoelectric
    figures of merit of up to 1.3 at 850 K, which is, to the best of our knowledge,
    the highest thermoelectric figure of merit reported for solution-processed SnTe.
article_processing_charge: No
article_type: original
author:
- first_name: Maria
  full_name: Ibáñez, Maria
  id: 43C61214-F248-11E8-B48F-1D18A9856A87
  last_name: Ibáñez
  orcid: 0000-0001-5013-2843
- first_name: Roger
  full_name: Hasler, Roger
  last_name: Hasler
- first_name: Aziz
  full_name: Genç, Aziz
  last_name: Genç
- first_name: Yu
  full_name: Liu, Yu
  id: 2A70014E-F248-11E8-B48F-1D18A9856A87
  last_name: Liu
  orcid: 0000-0001-7313-6740
- first_name: Beatrice
  full_name: Kuster, Beatrice
  last_name: Kuster
- first_name: Maximilian
  full_name: Schuster, Maximilian
  last_name: Schuster
- first_name: Oleksandr
  full_name: Dobrozhan, Oleksandr
  last_name: Dobrozhan
- first_name: Doris
  full_name: Cadavid, Doris
  last_name: Cadavid
- first_name: Jordi
  full_name: Arbiol, Jordi
  last_name: Arbiol
- first_name: Andreu
  full_name: Cabot, Andreu
  last_name: Cabot
- first_name: Maksym V.
  full_name: Kovalenko, Maksym V.
  last_name: Kovalenko
citation:
  ama: Ibáñez M, Hasler R, Genç A, et al. Ligand-mediated band engineering in bottom-up
    assembled SnTe nanocomposites for thermoelectric energy conversion. <i>Journal
    of the American Chemical Society</i>. 2019;141(20):8025-8029. doi:<a href="https://doi.org/10.1021/jacs.9b01394">10.1021/jacs.9b01394</a>
  apa: Ibáñez, M., Hasler, R., Genç, A., Liu, Y., Kuster, B., Schuster, M., … Kovalenko,
    M. V. (2019). Ligand-mediated band engineering in bottom-up assembled SnTe nanocomposites
    for thermoelectric energy conversion. <i>Journal of the American Chemical Society</i>.
    American Chemical Society. <a href="https://doi.org/10.1021/jacs.9b01394">https://doi.org/10.1021/jacs.9b01394</a>
  chicago: Ibáñez, Maria, Roger Hasler, Aziz Genç, Yu Liu, Beatrice Kuster, Maximilian
    Schuster, Oleksandr Dobrozhan, et al. “Ligand-Mediated Band Engineering in Bottom-up
    Assembled SnTe Nanocomposites for Thermoelectric Energy Conversion.” <i>Journal
    of the American Chemical Society</i>. American Chemical Society, 2019. <a href="https://doi.org/10.1021/jacs.9b01394">https://doi.org/10.1021/jacs.9b01394</a>.
  ieee: M. Ibáñez <i>et al.</i>, “Ligand-mediated band engineering in bottom-up assembled
    SnTe nanocomposites for thermoelectric energy conversion,” <i>Journal of the American
    Chemical Society</i>, vol. 141, no. 20. American Chemical Society, pp. 8025–8029,
    2019.
  ista: Ibáñez M, Hasler R, Genç A, Liu Y, Kuster B, Schuster M, Dobrozhan O, Cadavid
    D, Arbiol J, Cabot A, Kovalenko MV. 2019. Ligand-mediated band engineering in
    bottom-up assembled SnTe nanocomposites for thermoelectric energy conversion.
    Journal of the American Chemical Society. 141(20), 8025–8029.
  mla: Ibáñez, Maria, et al. “Ligand-Mediated Band Engineering in Bottom-up Assembled
    SnTe Nanocomposites for Thermoelectric Energy Conversion.” <i>Journal of the American
    Chemical Society</i>, vol. 141, no. 20, American Chemical Society, 2019, pp. 8025–29,
    doi:<a href="https://doi.org/10.1021/jacs.9b01394">10.1021/jacs.9b01394</a>.
  short: M. Ibáñez, R. Hasler, A. Genç, Y. Liu, B. Kuster, M. Schuster, O. Dobrozhan,
    D. Cadavid, J. Arbiol, A. Cabot, M.V. Kovalenko, Journal of the American Chemical
    Society 141 (2019) 8025–8029.
date_created: 2019-06-25T11:53:35Z
date_published: 2019-04-19T00:00:00Z
date_updated: 2025-04-14T07:44:06Z
day: '19'
ddc:
- '540'
department:
- _id: MaIb
doi: 10.1021/jacs.9b01394
ec_funded: 1
external_id:
  isi:
  - '000469292300004'
  pmid:
  - '31017419 '
file:
- access_level: open_access
  checksum: 34d7ec837869cc6a07996b54f75696b7
  content_type: application/pdf
  creator: cpetz
  date_created: 2019-06-25T11:59:00Z
  date_updated: 2020-07-14T12:47:34Z
  file_id: '6587'
  file_name: JACS_April2019.pdf
  file_size: 6234004
  relation: main_file
file_date_updated: 2020-07-14T12:47:34Z
has_accepted_license: '1'
intvolume: '       141'
isi: 1
issue: '20'
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
page: 8025-8029
pmid: 1
project:
- _id: 260C2330-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '754411'
  name: ISTplus - Postdoctoral Fellowships
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Ligand-mediated band engineering in bottom-up assembled SnTe nanocomposites
  for thermoelectric energy conversion
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 141
year: '2019'
...
---
OA_type: closed access
_id: '17918'
abstract:
- lang: eng
  text: The single-molecule conductance of silanes is suppressed due to destructive
    quantum interference in conformations with cisoid dihedral angles along the molecular
    backbone. Yet, despite the structural similarity, σ-interference effects have
    not been observed in alkanes. Here we report that the methyl substituents used
    in silanes are a prerequisite for σ-interference in these systems. Through density
    functional theory calculations, we find that the destructive interference is not
    evident to the same extent in nonmethylated silanes. We find the same is true
    in alkanes as the transmission is significantly suppressed in permethylated cyclic
    and bicyclic alkanes. Using scanning tunneling microscope break-junction method
    we determine the single-molecule conductance of functionalized cyclohexane and
    bicyclo[2.2.2]octane that are found to be higher than that of equivalent permethylated
    silanes. Rather than the difference between carbon and silicon atoms in the molecular
    backbones, our calculations reveal that it is primarily the difference between
    hydrogen and methyl substituents that result in the different electron transport
    properties of nonmethylated alkanes and permethylated silanes. Chemical substituents
    play an important role in determining the single-molecule conductance of saturated
    molecules, and this must be considered when we improve and expand the chemical
    design of insulating organic molecules.
article_processing_charge: No
article_type: original
author:
- first_name: Marc H.
  full_name: Garner, Marc H.
  last_name: Garner
- first_name: Haixing
  full_name: Li, Haixing
  last_name: Li
- first_name: Madhav
  full_name: Neupane, Madhav
  last_name: Neupane
- first_name: Qi
  full_name: Zou, Qi
  last_name: Zou
- first_name: Taifeng
  full_name: Liu, Taifeng
  last_name: Liu
- first_name: Timothy A.
  full_name: Su, Timothy A.
  last_name: Su
- first_name: Zhichun
  full_name: Shangguan, Zhichun
  last_name: Shangguan
- first_name: Daniel W.
  full_name: Paley, Daniel W.
  last_name: Paley
- first_name: Fay
  full_name: Ng, Fay
  last_name: Ng
- first_name: Shengxiong
  full_name: Xiao, Shengxiong
  last_name: Xiao
- first_name: Colin
  full_name: Nuckolls, Colin
  last_name: Nuckolls
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
- first_name: Gemma C.
  full_name: Solomon, Gemma C.
  last_name: Solomon
citation:
  ama: Garner MH, Li H, Neupane M, et al. Permethylation introduces destructive quantum
    interference in saturated silanes. <i>Journal of the American Chemical Society</i>.
    2019;141(39):15471-15476. doi:<a href="https://doi.org/10.1021/jacs.9b06965">10.1021/jacs.9b06965</a>
  apa: Garner, M. H., Li, H., Neupane, M., Zou, Q., Liu, T., Su, T. A., … Solomon,
    G. C. (2019). Permethylation introduces destructive quantum interference in saturated
    silanes. <i>Journal of the American Chemical Society</i>. American Chemical Society.
    <a href="https://doi.org/10.1021/jacs.9b06965">https://doi.org/10.1021/jacs.9b06965</a>
  chicago: Garner, Marc H., Haixing Li, Madhav Neupane, Qi Zou, Taifeng Liu, Timothy
    A. Su, Zhichun Shangguan, et al. “Permethylation Introduces Destructive Quantum
    Interference in Saturated Silanes.” <i>Journal of the American Chemical Society</i>.
    American Chemical Society, 2019. <a href="https://doi.org/10.1021/jacs.9b06965">https://doi.org/10.1021/jacs.9b06965</a>.
  ieee: M. H. Garner <i>et al.</i>, “Permethylation introduces destructive quantum
    interference in saturated silanes,” <i>Journal of the American Chemical Society</i>,
    vol. 141, no. 39. American Chemical Society, pp. 15471–15476, 2019.
  ista: Garner MH, Li H, Neupane M, Zou Q, Liu T, Su TA, Shangguan Z, Paley DW, Ng
    F, Xiao S, Nuckolls C, Venkataraman L, Solomon GC. 2019. Permethylation introduces
    destructive quantum interference in saturated silanes. Journal of the American
    Chemical Society. 141(39), 15471–15476.
  mla: Garner, Marc H., et al. “Permethylation Introduces Destructive Quantum Interference
    in Saturated Silanes.” <i>Journal of the American Chemical Society</i>, vol. 141,
    no. 39, American Chemical Society, 2019, pp. 15471–76, doi:<a href="https://doi.org/10.1021/jacs.9b06965">10.1021/jacs.9b06965</a>.
  short: M.H. Garner, H. Li, M. Neupane, Q. Zou, T. Liu, T.A. Su, Z. Shangguan, D.W.
    Paley, F. Ng, S. Xiao, C. Nuckolls, L. Venkataraman, G.C. Solomon, Journal of
    the American Chemical Society 141 (2019) 15471–15476.
date_created: 2024-09-09T07:42:26Z
date_published: 2019-09-10T00:00:00Z
date_updated: 2024-12-10T12:39:27Z
day: '10'
doi: 10.1021/jacs.9b06965
extern: '1'
external_id:
  pmid:
  - '31500410'
intvolume: '       141'
issue: '39'
language:
- iso: eng
month: '09'
oa_version: None
page: 15471-15476
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Permethylation introduces destructive quantum interference in saturated silanes
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 141
year: '2019'
...
---
OA_type: closed access
_id: '21822'
abstract:
- lang: eng
  text: A novel library of tunable negative photochromic compounds, donor–acceptor
    Stenhouse adducts (DASAs), is reported. Tailoring the electron deficient “acceptor”
    moiety yielded DASAs that can be activated with mild visible and far red light.
    The effect of acceptor composition on reactivity, absorption, equilibrium, and
    cyclability is exploited for the design of high performance photoswitches. The
    structural changes to the carbon acid acceptor also provide access to new, more
    structurally diverse DASA derivatives by facilitating the ring-opening reaction
    with electron deficient amine donors.
article_processing_charge: No
article_type: original
author:
- first_name: James R.
  full_name: Hemmer, James R.
  last_name: Hemmer
- first_name: Zachariah A.
  full_name: Page, Zachariah A.
  last_name: Page
- first_name: Kyle D.
  full_name: Clark, Kyle D.
  last_name: Clark
- first_name: Friedrich J
  full_name: Stricker, Friedrich J
  id: 7aca2cfc-46cf-11f0-abd3-8c96b5186745
  last_name: Stricker
- first_name: Neil D.
  full_name: Dolinski, Neil D.
  last_name: Dolinski
- first_name: Craig J.
  full_name: Hawker, Craig J.
  last_name: Hawker
- first_name: Javier
  full_name: Read de Alaniz, Javier
  last_name: Read de Alaniz
citation:
  ama: Hemmer JR, Page ZA, Clark KD, et al. Controlling dark equilibria and enhancing
    donor–acceptor Stenhouse adduct photoswitching properties through carbon acid
    design. <i>Journal of the American Chemical Society</i>. 2018;140(33):10425-10429.
    doi:<a href="https://doi.org/10.1021/jacs.8b06067">10.1021/jacs.8b06067</a>
  apa: Hemmer, J. R., Page, Z. A., Clark, K. D., Stricker, F. J., Dolinski, N. D.,
    Hawker, C. J., &#38; Read de Alaniz, J. (2018). Controlling dark equilibria and
    enhancing donor–acceptor Stenhouse adduct photoswitching properties through carbon
    acid design. <i>Journal of the American Chemical Society</i>. American Chemical
    Society. <a href="https://doi.org/10.1021/jacs.8b06067">https://doi.org/10.1021/jacs.8b06067</a>
  chicago: Hemmer, James R., Zachariah A. Page, Kyle D. Clark, Friedrich J Stricker,
    Neil D. Dolinski, Craig J. Hawker, and Javier Read de Alaniz. “Controlling Dark
    Equilibria and Enhancing Donor–Acceptor Stenhouse Adduct Photoswitching Properties
    through Carbon Acid Design.” <i>Journal of the American Chemical Society</i>.
    American Chemical Society, 2018. <a href="https://doi.org/10.1021/jacs.8b06067">https://doi.org/10.1021/jacs.8b06067</a>.
  ieee: J. R. Hemmer <i>et al.</i>, “Controlling dark equilibria and enhancing donor–acceptor
    Stenhouse adduct photoswitching properties through carbon acid design,” <i>Journal
    of the American Chemical Society</i>, vol. 140, no. 33. American Chemical Society,
    pp. 10425–10429, 2018.
  ista: Hemmer JR, Page ZA, Clark KD, Stricker FJ, Dolinski ND, Hawker CJ, Read de
    Alaniz J. 2018. Controlling dark equilibria and enhancing donor–acceptor Stenhouse
    adduct photoswitching properties through carbon acid design. Journal of the American
    Chemical Society. 140(33), 10425–10429.
  mla: Hemmer, James R., et al. “Controlling Dark Equilibria and Enhancing Donor–Acceptor
    Stenhouse Adduct Photoswitching Properties through Carbon Acid Design.” <i>Journal
    of the American Chemical Society</i>, vol. 140, no. 33, American Chemical Society,
    2018, pp. 10425–29, doi:<a href="https://doi.org/10.1021/jacs.8b06067">10.1021/jacs.8b06067</a>.
  short: J.R. Hemmer, Z.A. Page, K.D. Clark, F.J. Stricker, N.D. Dolinski, C.J. Hawker,
    J. Read de Alaniz, Journal of the American Chemical Society 140 (2018) 10425–10429.
date_created: 2026-05-06T10:58:29Z
date_published: 2018-08-03T00:00:00Z
date_updated: 2026-05-11T08:46:52Z
day: '03'
ddc:
- '540'
doi: 10.1021/jacs.8b06067
extern: '1'
external_id:
  pmid:
  - '30074782'
intvolume: '       140'
issue: '33'
language:
- iso: eng
month: '08'
oa_version: None
page: 10425-10429
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Controlling dark equilibria and enhancing donor–acceptor Stenhouse adduct photoswitching
  properties through carbon acid design
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 140
year: '2018'
...
---
OA_type: closed access
_id: '17927'
abstract:
- lang: eng
  text: Linear silanes are efficient molecular wires due to strong σ-conjugation in
    the transoid conformation; however, the structure–function relationship for the
    conformational dependence of the single-molecule conductance of silanes remains
    untested. Here we report the syntheses, electrical measurements, and theoretical
    characterization of four series of functionalized cyclic and bicyclic silanes
    including a cyclotetrasilane, a cyclopentasilane, a bicyclo[2.2.1]heptasilane,
    and a bicyclo[2.2.2]octasilane, which are all extended by linear silicon linkers
    of varying length. We find an unusual variation of the single-molecule conductance
    among the four series at each linker length. We determine the relative conductance
    of the (bi)cyclic silicon structures by using the common length dependence of
    the four series rather than comparing the conductance at a single length. In contrast
    with the cyclic π-conjugated molecules, the conductance of σ-conjugated (bi)cyclic
    silanes is dominated by a single path through the molecule and is controlled by
    the dihedral angles along this path. This strong sensitivity to molecular conformation
    dictates the single-molecule conductance of σ-conjugated silanes and allows for
    systematic control of the conductance through molecular design.
article_processing_charge: No
article_type: original
author:
- first_name: Haixing
  full_name: Li, Haixing
  last_name: Li
- first_name: Marc H.
  full_name: Garner, Marc H.
  last_name: Garner
- first_name: Zhichun
  full_name: Shangguan, Zhichun
  last_name: Shangguan
- first_name: Yan
  full_name: Chen, Yan
  last_name: Chen
- first_name: Qianwen
  full_name: Zheng, Qianwen
  last_name: Zheng
- first_name: Timothy A.
  full_name: Su, Timothy A.
  last_name: Su
- first_name: Madhav
  full_name: Neupane, Madhav
  last_name: Neupane
- first_name: Taifeng
  full_name: Liu, Taifeng
  last_name: Liu
- first_name: Michael L.
  full_name: Steigerwald, Michael L.
  last_name: Steigerwald
- first_name: Fay
  full_name: Ng, Fay
  last_name: Ng
- first_name: Colin
  full_name: Nuckolls, Colin
  last_name: Nuckolls
- first_name: Shengxiong
  full_name: Xiao, Shengxiong
  last_name: Xiao
- first_name: Gemma C.
  full_name: Solomon, Gemma C.
  last_name: Solomon
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
citation:
  ama: Li H, Garner MH, Shangguan Z, et al. Large variations in the single-molecule
    conductance of cyclic and bicyclic silanes. <i>Journal of the American Chemical
    Society</i>. 2018;140(44):15080-15088. doi:<a href="https://doi.org/10.1021/jacs.8b10296">10.1021/jacs.8b10296</a>
  apa: Li, H., Garner, M. H., Shangguan, Z., Chen, Y., Zheng, Q., Su, T. A., … Venkataraman,
    L. (2018). Large variations in the single-molecule conductance of cyclic and bicyclic
    silanes. <i>Journal of the American Chemical Society</i>. American Chemical Society.
    <a href="https://doi.org/10.1021/jacs.8b10296">https://doi.org/10.1021/jacs.8b10296</a>
  chicago: Li, Haixing, Marc H. Garner, Zhichun Shangguan, Yan Chen, Qianwen Zheng,
    Timothy A. Su, Madhav Neupane, et al. “Large Variations in the Single-Molecule
    Conductance of Cyclic and Bicyclic Silanes.” <i>Journal of the American Chemical
    Society</i>. American Chemical Society, 2018. <a href="https://doi.org/10.1021/jacs.8b10296">https://doi.org/10.1021/jacs.8b10296</a>.
  ieee: H. Li <i>et al.</i>, “Large variations in the single-molecule conductance
    of cyclic and bicyclic silanes,” <i>Journal of the American Chemical Society</i>,
    vol. 140, no. 44. American Chemical Society, pp. 15080–15088, 2018.
  ista: Li H, Garner MH, Shangguan Z, Chen Y, Zheng Q, Su TA, Neupane M, Liu T, Steigerwald
    ML, Ng F, Nuckolls C, Xiao S, Solomon GC, Venkataraman L. 2018. Large variations
    in the single-molecule conductance of cyclic and bicyclic silanes. Journal of
    the American Chemical Society. 140(44), 15080–15088.
  mla: Li, Haixing, et al. “Large Variations in the Single-Molecule Conductance of
    Cyclic and Bicyclic Silanes.” <i>Journal of the American Chemical Society</i>,
    vol. 140, no. 44, American Chemical Society, 2018, pp. 15080–88, doi:<a href="https://doi.org/10.1021/jacs.8b10296">10.1021/jacs.8b10296</a>.
  short: H. Li, M.H. Garner, Z. Shangguan, Y. Chen, Q. Zheng, T.A. Su, M. Neupane,
    T. Liu, M.L. Steigerwald, F. Ng, C. Nuckolls, S. Xiao, G.C. Solomon, L. Venkataraman,
    Journal of the American Chemical Society 140 (2018) 15080–15088.
date_created: 2024-09-09T07:53:50Z
date_published: 2018-10-17T00:00:00Z
date_updated: 2024-12-11T08:21:09Z
day: '17'
doi: 10.1021/jacs.8b10296
extern: '1'
external_id:
  pmid:
  - '30372051'
intvolume: '       140'
issue: '44'
language:
- iso: eng
month: '10'
oa_version: None
page: 15080-15088
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Large variations in the single-molecule conductance of cyclic and bicyclic
  silanes
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 140
year: '2018'
...
