---
_id: '14015'
abstract:
- lang: eng
  text: We advance high-harmonic spectroscopy to resolve molecular charge migration
    in time and space and simultaneously demonstrate extensive control over the process.
    A multidimensional approach enables us to reconstruct both quantum amplitudes
    and phases with a resolution of better than 100 attoseconds and to separately
    reconstruct field-free and laser- driven charge migration. Our techniques make
    charge migration in molecules measurable on the attosecond time scale and open
    new avenues for laser control of electronic primary processes.
article_number: '112136'
article_processing_charge: No
article_type: original
author:
- first_name: P M
  full_name: Kraus, P M
  last_name: Kraus
- first_name: B
  full_name: Mignolet, B
  last_name: Mignolet
- first_name: Denitsa Rangelova
  full_name: Baykusheva, Denitsa Rangelova
  id: 71b4d059-2a03-11ee-914d-dfa3beed6530
  last_name: Baykusheva
- first_name: A
  full_name: Rupenyan, A
  last_name: Rupenyan
- first_name: L
  full_name: Horný, L
  last_name: Horný
- first_name: E F
  full_name: Penka, E F
  last_name: Penka
- first_name: O I
  full_name: Tolstikhin, O I
  last_name: Tolstikhin
- first_name: J
  full_name: Schneider, J
  last_name: Schneider
- first_name: F
  full_name: Jensen, F
  last_name: Jensen
- first_name: L B
  full_name: Madsen, L B
  last_name: Madsen
- first_name: A D
  full_name: Bandrauk, A D
  last_name: Bandrauk
- first_name: F
  full_name: Remacle, F
  last_name: Remacle
- first_name: H J
  full_name: Wörner, H J
  last_name: Wörner
citation:
  ama: 'Kraus PM, Mignolet B, Baykusheva DR, et al. Attosecond charge migration and
    its laser control. <i>Journal of Physics: Conference Series</i>. 2015;635(11).
    doi:<a href="https://doi.org/10.1088/1742-6596/635/11/112136">10.1088/1742-6596/635/11/112136</a>'
  apa: 'Kraus, P. M., Mignolet, B., Baykusheva, D. R., Rupenyan, A., Horný, L., Penka,
    E. F., … Wörner, H. J. (2015). Attosecond charge migration and its laser control.
    <i>Journal of Physics: Conference Series</i>. IOP Publishing. <a href="https://doi.org/10.1088/1742-6596/635/11/112136">https://doi.org/10.1088/1742-6596/635/11/112136</a>'
  chicago: 'Kraus, P M, B Mignolet, Denitsa Rangelova Baykusheva, A Rupenyan, L Horný,
    E F Penka, O I Tolstikhin, et al. “Attosecond Charge Migration and Its Laser Control.”
    <i>Journal of Physics: Conference Series</i>. IOP Publishing, 2015. <a href="https://doi.org/10.1088/1742-6596/635/11/112136">https://doi.org/10.1088/1742-6596/635/11/112136</a>.'
  ieee: 'P. M. Kraus <i>et al.</i>, “Attosecond charge migration and its laser control,”
    <i>Journal of Physics: Conference Series</i>, vol. 635, no. 11. IOP Publishing,
    2015.'
  ista: 'Kraus PM, Mignolet B, Baykusheva DR, Rupenyan A, Horný L, Penka EF, Tolstikhin
    OI, Schneider J, Jensen F, Madsen LB, Bandrauk AD, Remacle F, Wörner HJ. 2015.
    Attosecond charge migration and its laser control. Journal of Physics: Conference
    Series. 635(11), 112136.'
  mla: 'Kraus, P. M., et al. “Attosecond Charge Migration and Its Laser Control.”
    <i>Journal of Physics: Conference Series</i>, vol. 635, no. 11, 112136, IOP Publishing,
    2015, doi:<a href="https://doi.org/10.1088/1742-6596/635/11/112136">10.1088/1742-6596/635/11/112136</a>.'
  short: 'P.M. Kraus, B. Mignolet, D.R. Baykusheva, A. Rupenyan, L. Horný, E.F. Penka,
    O.I. Tolstikhin, J. Schneider, F. Jensen, L.B. Madsen, A.D. Bandrauk, F. Remacle,
    H.J. Wörner, Journal of Physics: Conference Series 635 (2015).'
date_created: 2023-08-10T06:37:53Z
date_published: 2015-07-01T00:00:00Z
date_updated: 2023-08-22T08:49:14Z
day: '01'
doi: 10.1088/1742-6596/635/11/112136
extern: '1'
intvolume: '       635'
issue: '11'
keyword:
- General Physics and Astronomy
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1088/1742-6596/635/11/112136
month: '07'
oa: 1
oa_version: Published Version
publication: 'Journal of Physics: Conference Series'
publication_identifier:
  eissn:
  - 1742-6596
  issn:
  - 1742-6588
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: Attosecond charge migration and its laser control
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 635
year: '2015'
...
---
_id: '14016'
abstract:
- lang: eng
  text: All attosecond time-resolved measurements have so far relied on the use of
    intense near-infrared laser pulses. In particular, attosecond streaking, laser-induced
    electron diffraction and high-harmonic generation all make use of non-perturbative
    light–matter interactions. Remarkably, the effect of the strong laser field on
    the studied sample has often been neglected in previous studies. Here we use high-harmonic
    spectroscopy to measure laser-induced modifications of the electronic structure
    of molecules. We study high-harmonic spectra of spatially oriented CH3F and CH3Br
    as generic examples of polar polyatomic molecules. We accurately measure intensity
    ratios of even and odd-harmonic orders, and of the emission from aligned and unaligned
    molecules. We show that these robust observables reveal a substantial modification
    of the molecular electronic structure by the external laser field. Our insights
    offer new challenges and opportunities for a range of emerging strong-field attosecond
    spectroscopies.
article_number: '7039'
article_processing_charge: No
article_type: original
author:
- first_name: P. M.
  full_name: Kraus, P. M.
  last_name: Kraus
- first_name: O. I.
  full_name: Tolstikhin, O. I.
  last_name: Tolstikhin
- first_name: Denitsa Rangelova
  full_name: Baykusheva, Denitsa Rangelova
  id: 71b4d059-2a03-11ee-914d-dfa3beed6530
  last_name: Baykusheva
- first_name: A.
  full_name: Rupenyan, A.
  last_name: Rupenyan
- first_name: J.
  full_name: Schneider, J.
  last_name: Schneider
- first_name: C. Z.
  full_name: Bisgaard, C. Z.
  last_name: Bisgaard
- first_name: T.
  full_name: Morishita, T.
  last_name: Morishita
- first_name: F.
  full_name: Jensen, F.
  last_name: Jensen
- first_name: L. B.
  full_name: Madsen, L. B.
  last_name: Madsen
- first_name: H. J.
  full_name: Wörner, H. J.
  last_name: Wörner
citation:
  ama: Kraus PM, Tolstikhin OI, Baykusheva DR, et al. Observation of laser-induced
    electronic structure in oriented polyatomic molecules. <i>Nature Communications</i>.
    2015;6. doi:<a href="https://doi.org/10.1038/ncomms8039">10.1038/ncomms8039</a>
  apa: Kraus, P. M., Tolstikhin, O. I., Baykusheva, D. R., Rupenyan, A., Schneider,
    J., Bisgaard, C. Z., … Wörner, H. J. (2015). Observation of laser-induced electronic
    structure in oriented polyatomic molecules. <i>Nature Communications</i>. Springer
    Nature. <a href="https://doi.org/10.1038/ncomms8039">https://doi.org/10.1038/ncomms8039</a>
  chicago: Kraus, P. M., O. I. Tolstikhin, Denitsa Rangelova Baykusheva, A. Rupenyan,
    J. Schneider, C. Z. Bisgaard, T. Morishita, F. Jensen, L. B. Madsen, and H. J.
    Wörner. “Observation of Laser-Induced Electronic Structure in Oriented Polyatomic
    Molecules.” <i>Nature Communications</i>. Springer Nature, 2015. <a href="https://doi.org/10.1038/ncomms8039">https://doi.org/10.1038/ncomms8039</a>.
  ieee: P. M. Kraus <i>et al.</i>, “Observation of laser-induced electronic structure
    in oriented polyatomic molecules,” <i>Nature Communications</i>, vol. 6. Springer
    Nature, 2015.
  ista: Kraus PM, Tolstikhin OI, Baykusheva DR, Rupenyan A, Schneider J, Bisgaard
    CZ, Morishita T, Jensen F, Madsen LB, Wörner HJ. 2015. Observation of laser-induced
    electronic structure in oriented polyatomic molecules. Nature Communications.
    6, 7039.
  mla: Kraus, P. M., et al. “Observation of Laser-Induced Electronic Structure in
    Oriented Polyatomic Molecules.” <i>Nature Communications</i>, vol. 6, 7039, Springer
    Nature, 2015, doi:<a href="https://doi.org/10.1038/ncomms8039">10.1038/ncomms8039</a>.
  short: P.M. Kraus, O.I. Tolstikhin, D.R. Baykusheva, A. Rupenyan, J. Schneider,
    C.Z. Bisgaard, T. Morishita, F. Jensen, L.B. Madsen, H.J. Wörner, Nature Communications
    6 (2015).
date_created: 2023-08-10T06:38:01Z
date_published: 2015-05-05T00:00:00Z
date_updated: 2023-08-22T08:52:56Z
day: '05'
doi: 10.1038/ncomms8039
extern: '1'
external_id:
  pmid:
  - '25940229'
intvolume: '         6'
keyword:
- General Physics and Astronomy
- General Biochemistry
- Genetics and Molecular Biology
- General Chemistry
- Multidisciplinary
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1038/ncomms8039
month: '05'
oa: 1
oa_version: Published Version
pmid: 1
publication: Nature Communications
publication_identifier:
  eissn:
  - 2041-1723
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Observation of laser-induced electronic structure in oriented polyatomic molecules
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 6
year: '2015'
...
---
OA_place: publisher
OA_type: gold
_id: '8456'
abstract:
- lang: eng
  text: The large majority of three-dimensional structures of biological macromolecules
    have been determined by X-ray diffraction of crystalline samples. High-resolution
    structure determination crucially depends on the homogeneity of the protein crystal.
    Overall ‘rocking’ motion of molecules in the crystal is expected to influence
    diffraction quality, and such motion may therefore affect the process of solving
    crystal structures. Yet, so far overall molecular motion has not directly been
    observed in protein crystals, and the timescale of such dynamics remains unclear.
    Here we use solid-state NMR, X-ray diffraction methods and μs-long molecular dynamics
    simulations to directly characterize the rigid-body motion of a protein in different
    crystal forms. For ubiquitin crystals investigated in this study we determine
    the range of possible correlation times of rocking motion, 0.1–100 μs. The amplitude
    of rocking varies from one crystal form to another and is correlated with the
    resolution obtainable in X-ray diffraction experiments.
article_number: '8361'
article_processing_charge: Yes
article_type: original
author:
- first_name: Peixiang
  full_name: Ma, Peixiang
  last_name: Ma
- first_name: Yi
  full_name: Xue, Yi
  last_name: Xue
- first_name: Nicolas
  full_name: Coquelle, Nicolas
  last_name: Coquelle
- first_name: Jens D.
  full_name: Haller, Jens D.
  last_name: Haller
- first_name: Tairan
  full_name: Yuwen, Tairan
  last_name: Yuwen
- first_name: Isabel
  full_name: Ayala, Isabel
  last_name: Ayala
- first_name: Oleg
  full_name: Mikhailovskii, Oleg
  last_name: Mikhailovskii
- first_name: Dieter
  full_name: Willbold, Dieter
  last_name: Willbold
- first_name: Jacques-Philippe
  full_name: Colletier, Jacques-Philippe
  last_name: Colletier
- first_name: Nikolai R.
  full_name: Skrynnikov, Nikolai R.
  last_name: Skrynnikov
- first_name: Paul
  full_name: Schanda, Paul
  id: 7B541462-FAF6-11E9-A490-E8DFE5697425
  last_name: Schanda
  orcid: 0000-0002-9350-7606
citation:
  ama: Ma P, Xue Y, Coquelle N, et al. Observing the overall rocking motion of a protein
    in a crystal. <i>Nature Communications</i>. 2015;6. doi:<a href="https://doi.org/10.1038/ncomms9361">10.1038/ncomms9361</a>
  apa: Ma, P., Xue, Y., Coquelle, N., Haller, J. D., Yuwen, T., Ayala, I., … Schanda,
    P. (2015). Observing the overall rocking motion of a protein in a crystal. <i>Nature
    Communications</i>. Springer Nature. <a href="https://doi.org/10.1038/ncomms9361">https://doi.org/10.1038/ncomms9361</a>
  chicago: Ma, Peixiang, Yi Xue, Nicolas Coquelle, Jens D. Haller, Tairan Yuwen, Isabel
    Ayala, Oleg Mikhailovskii, et al. “Observing the Overall Rocking Motion of a Protein
    in a Crystal.” <i>Nature Communications</i>. Springer Nature, 2015. <a href="https://doi.org/10.1038/ncomms9361">https://doi.org/10.1038/ncomms9361</a>.
  ieee: P. Ma <i>et al.</i>, “Observing the overall rocking motion of a protein in
    a crystal,” <i>Nature Communications</i>, vol. 6. Springer Nature, 2015.
  ista: Ma P, Xue Y, Coquelle N, Haller JD, Yuwen T, Ayala I, Mikhailovskii O, Willbold
    D, Colletier J-P, Skrynnikov NR, Schanda P. 2015. Observing the overall rocking
    motion of a protein in a crystal. Nature Communications. 6, 8361.
  mla: Ma, Peixiang, et al. “Observing the Overall Rocking Motion of a Protein in
    a Crystal.” <i>Nature Communications</i>, vol. 6, 8361, Springer Nature, 2015,
    doi:<a href="https://doi.org/10.1038/ncomms9361">10.1038/ncomms9361</a>.
  short: P. Ma, Y. Xue, N. Coquelle, J.D. Haller, T. Yuwen, I. Ayala, O. Mikhailovskii,
    D. Willbold, J.-P. Colletier, N.R. Skrynnikov, P. Schanda, Nature Communications
    6 (2015).
date_created: 2020-09-18T10:07:36Z
date_published: 2015-10-05T00:00:00Z
date_updated: 2025-01-22T14:39:22Z
day: '05'
doi: 10.1038/ncomms9361
extern: '1'
intvolume: '         6'
keyword:
- General Biochemistry
- Genetics and Molecular Biology
- General Physics and Astronomy
- General Chemistry
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1038/ncomms9361
month: '10'
oa: 1
oa_version: Published Version
publication: Nature Communications
publication_identifier:
  issn:
  - 2041-1723
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Observing the overall rocking motion of a protein in a crystal
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 6
year: '2015'
...
---
_id: '8498'
abstract:
- lang: eng
  text: "In the present note we announce a proof of a strong form of Arnold diffusion
    for smooth convex Hamiltonian systems. Let ${\\mathbb T}^2$  be a 2-dimensional
    torus and B2 be the unit ball around the origin in ${\\mathbb R}^2$ . Fix ρ >
    0. Our main result says that for a 'generic' time-periodic perturbation of an
    integrable system of two degrees of freedom $H_0(p)+\\varepsilon H_1(\\theta,p,t),\\quad
    \\ \\theta\\in {\\mathbb T}^2,\\ p\\in B^2,\\ t\\in {\\mathbb T}={\\mathbb R}/{\\mathbb
    Z}$ , with a strictly convex H0, there exists a ρ-dense orbit (θε, pε, t)(t) in
    ${\\mathbb T}^2 \\times B^2 \\times {\\mathbb T}$ , namely, a ρ-neighborhood of
    the orbit contains ${\\mathbb T}^2 \\times B^2 \\times {\\mathbb T}$ .\r\n\r\nOur
    proof is a combination of geometric and variational methods. The fundamental elements
    of the construction are the usage of crumpled normally hyperbolic invariant cylinders
    from [9], flower and simple normally hyperbolic invariant manifolds from [36]
    as well as their kissing property at a strong double resonance. This allows us
    to build a 'connected' net of three-dimensional normally hyperbolic invariant
    manifolds. To construct diffusing orbits along this net we employ a version of
    the Mather variational method [41] equipped with weak KAM theory [28], proposed
    by Bernard in [7]."
article_processing_charge: No
article_type: original
author:
- first_name: Vadim
  full_name: Kaloshin, Vadim
  id: FE553552-CDE8-11E9-B324-C0EBE5697425
  last_name: Kaloshin
  orcid: 0000-0002-6051-2628
- first_name: K
  full_name: Zhang, K
  last_name: Zhang
citation:
  ama: Kaloshin V, Zhang K. Arnold diffusion for smooth convex systems of two and
    a half degrees of freedom. <i>Nonlinearity</i>. 2015;28(8):2699-2720. doi:<a href="https://doi.org/10.1088/0951-7715/28/8/2699">10.1088/0951-7715/28/8/2699</a>
  apa: Kaloshin, V., &#38; Zhang, K. (2015). Arnold diffusion for smooth convex systems
    of two and a half degrees of freedom. <i>Nonlinearity</i>. IOP Publishing. <a
    href="https://doi.org/10.1088/0951-7715/28/8/2699">https://doi.org/10.1088/0951-7715/28/8/2699</a>
  chicago: Kaloshin, Vadim, and K Zhang. “Arnold Diffusion for Smooth Convex Systems
    of Two and a Half Degrees of Freedom.” <i>Nonlinearity</i>. IOP Publishing, 2015.
    <a href="https://doi.org/10.1088/0951-7715/28/8/2699">https://doi.org/10.1088/0951-7715/28/8/2699</a>.
  ieee: V. Kaloshin and K. Zhang, “Arnold diffusion for smooth convex systems of two
    and a half degrees of freedom,” <i>Nonlinearity</i>, vol. 28, no. 8. IOP Publishing,
    pp. 2699–2720, 2015.
  ista: Kaloshin V, Zhang K. 2015. Arnold diffusion for smooth convex systems of two
    and a half degrees of freedom. Nonlinearity. 28(8), 2699–2720.
  mla: Kaloshin, Vadim, and K. Zhang. “Arnold Diffusion for Smooth Convex Systems
    of Two and a Half Degrees of Freedom.” <i>Nonlinearity</i>, vol. 28, no. 8, IOP
    Publishing, 2015, pp. 2699–720, doi:<a href="https://doi.org/10.1088/0951-7715/28/8/2699">10.1088/0951-7715/28/8/2699</a>.
  short: V. Kaloshin, K. Zhang, Nonlinearity 28 (2015) 2699–2720.
date_created: 2020-09-18T10:46:43Z
date_published: 2015-06-30T00:00:00Z
date_updated: 2021-01-12T08:19:41Z
day: '30'
doi: 10.1088/0951-7715/28/8/2699
extern: '1'
intvolume: '        28'
issue: '8'
keyword:
- Mathematical Physics
- General Physics and Astronomy
- Applied Mathematics
- Statistical and Nonlinear Physics
language:
- iso: eng
month: '06'
oa_version: None
page: 2699-2720
publication: Nonlinearity
publication_identifier:
  issn:
  - 0951-7715
  - 1361-6544
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
status: public
title: Arnold diffusion for smooth convex systems of two and a half degrees of freedom
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 28
year: '2015'
...
---
_id: '13399'
abstract:
- lang: eng
  text: Nature has long inspired scientists with its seemingly unlimited ability to
    harness solar energy and to utilize it to drive various physiological processes.
    With the help of man-made molecular photoswitches, we now have the potential to
    outperform natural systems in many ways, with the ultimate goal of fabricating
    multifunctional materials that operate at different light wavelengths. An important
    challenge in developing light-controlled artificial molecular machines lies in
    attaining a detailed understanding of the photoisomerization-coupled conformational
    changes that occur in macromolecules and molecular assemblies. In this issue of
    ACS Nano, Bléger, Rabe, and co-workers use force microscopy to provide interesting
    insights into the behavior of individual photoresponsive molecules and to identify
    contraction, extension, and crawling events accompanying light-induced isomerization.
article_processing_charge: No
article_type: original
author:
- first_name: Pintu K.
  full_name: Kundu, Pintu K.
  last_name: Kundu
- first_name: Rafal
  full_name: Klajn, Rafal
  id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
  last_name: Klajn
citation:
  ama: Kundu PK, Klajn R. Watching single molecules move in response to light. <i>ACS
    Nano</i>. 2014;8(12):11913-11916. doi:<a href="https://doi.org/10.1021/nn506656r">10.1021/nn506656r</a>
  apa: Kundu, P. K., &#38; Klajn, R. (2014). Watching single molecules move in response
    to light. <i>ACS Nano</i>. American Chemical Society. <a href="https://doi.org/10.1021/nn506656r">https://doi.org/10.1021/nn506656r</a>
  chicago: Kundu, Pintu K., and Rafal Klajn. “Watching Single Molecules Move in Response
    to Light.” <i>ACS Nano</i>. American Chemical Society, 2014. <a href="https://doi.org/10.1021/nn506656r">https://doi.org/10.1021/nn506656r</a>.
  ieee: P. K. Kundu and R. Klajn, “Watching single molecules move in response to light,”
    <i>ACS Nano</i>, vol. 8, no. 12. American Chemical Society, pp. 11913–11916, 2014.
  ista: Kundu PK, Klajn R. 2014. Watching single molecules move in response to light.
    ACS Nano. 8(12), 11913–11916.
  mla: Kundu, Pintu K., and Rafal Klajn. “Watching Single Molecules Move in Response
    to Light.” <i>ACS Nano</i>, vol. 8, no. 12, American Chemical Society, 2014, pp.
    11913–16, doi:<a href="https://doi.org/10.1021/nn506656r">10.1021/nn506656r</a>.
  short: P.K. Kundu, R. Klajn, ACS Nano 8 (2014) 11913–11916.
date_created: 2023-08-01T09:45:42Z
date_published: 2014-12-23T00:00:00Z
date_updated: 2024-10-14T12:18:29Z
day: '23'
doi: 10.1021/nn506656r
extern: '1'
external_id:
  pmid:
  - '25474733'
intvolume: '         8'
issue: '12'
keyword:
- General Physics and Astronomy
- General Engineering
- General Materials Science
language:
- iso: eng
month: '12'
oa_version: None
page: 11913-11916
pmid: 1
publication: ACS Nano
publication_identifier:
  eissn:
  - 1936-086X
  issn:
  - 1936-0851
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Watching single molecules move in response to light
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 8
year: '2014'
...
---
_id: '13402'
abstract:
- lang: eng
  text: Nanoporous frameworks are polymeric materials built from rigid molecules,
    which give rise to their nanoporous structures with applications in gas sorption
    and storage, catalysis and others. Conceptually new applications could emerge,
    should these beneficial properties be manipulated by external stimuli in a reversible
    manner. One approach to render nanoporous frameworks responsive to external signals
    would be to immobilize molecular switches within their nanopores. Although the
    majority of molecular switches require conformational freedom to isomerize, and
    switching in the solid state is prohibited, the nanopores may provide enough room
    for the switches to efficiently isomerize. Here we describe two families of nanoporous
    materials incorporating the spiropyran molecular switch. These materials exhibit
    a variety of interesting properties, including reversible photochromism and acidochromism
    under solvent-free conditions, light-controlled capture and release of metal ions,
    as well reversible chromism induced by solvation/desolvation.
article_number: '3588'
article_processing_charge: No
article_type: original
author:
- first_name: Pintu K.
  full_name: Kundu, Pintu K.
  last_name: Kundu
- first_name: Gregory L.
  full_name: Olsen, Gregory L.
  last_name: Olsen
- first_name: Vladimir
  full_name: Kiss, Vladimir
  last_name: Kiss
- first_name: Rafal
  full_name: Klajn, Rafal
  id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
  last_name: Klajn
citation:
  ama: Kundu PK, Olsen GL, Kiss V, Klajn R. Nanoporous frameworks exhibiting multiple
    stimuli responsiveness. <i>Nature Communications</i>. 2014;5. doi:<a href="https://doi.org/10.1038/ncomms4588">10.1038/ncomms4588</a>
  apa: Kundu, P. K., Olsen, G. L., Kiss, V., &#38; Klajn, R. (2014). Nanoporous frameworks
    exhibiting multiple stimuli responsiveness. <i>Nature Communications</i>. Springer
    Nature. <a href="https://doi.org/10.1038/ncomms4588">https://doi.org/10.1038/ncomms4588</a>
  chicago: Kundu, Pintu K., Gregory L. Olsen, Vladimir Kiss, and Rafal Klajn. “Nanoporous
    Frameworks Exhibiting Multiple Stimuli Responsiveness.” <i>Nature Communications</i>.
    Springer Nature, 2014. <a href="https://doi.org/10.1038/ncomms4588">https://doi.org/10.1038/ncomms4588</a>.
  ieee: P. K. Kundu, G. L. Olsen, V. Kiss, and R. Klajn, “Nanoporous frameworks exhibiting
    multiple stimuli responsiveness,” <i>Nature Communications</i>, vol. 5. Springer
    Nature, 2014.
  ista: Kundu PK, Olsen GL, Kiss V, Klajn R. 2014. Nanoporous frameworks exhibiting
    multiple stimuli responsiveness. Nature Communications. 5, 3588.
  mla: Kundu, Pintu K., et al. “Nanoporous Frameworks Exhibiting Multiple Stimuli
    Responsiveness.” <i>Nature Communications</i>, vol. 5, 3588, Springer Nature,
    2014, doi:<a href="https://doi.org/10.1038/ncomms4588">10.1038/ncomms4588</a>.
  short: P.K. Kundu, G.L. Olsen, V. Kiss, R. Klajn, Nature Communications 5 (2014).
date_created: 2023-08-01T09:46:27Z
date_published: 2014-04-07T00:00:00Z
date_updated: 2024-10-14T12:20:30Z
day: '07'
doi: 10.1038/ncomms4588
extern: '1'
external_id:
  pmid:
  - '24709950'
intvolume: '         5'
keyword:
- General Physics and Astronomy
- General Biochemistry
- Genetics and Molecular Biology
- General Chemistry
- Multidisciplinary
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1038/ncomms4588
month: '04'
oa: 1
oa_version: Published Version
pmid: 1
publication: Nature Communications
publication_identifier:
  eissn:
  - 2041-1723
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Nanoporous frameworks exhibiting multiple stimuli responsiveness
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 5
year: '2014'
...
---
_id: '14019'
abstract:
- lang: eng
  text: The cyclopropene radical cation (c-C3H₄⁺) is an important but poorly characterized
    three-membered-ring hydrocarbon. We report on a measurement of the high-resolution
    photoelectron and photoionization spectra of cyclopropene and several deuterated
    isotopomers, from which we have determined the rovibrational energy level structure
    of the X⁺ (2)B2 ground electronic state of c-C3H₄⁺ at low energies for the first
    time. The synthesis of the partially deuterated isotopomers always resulted in
    mixtures of several isotopomers, differing in their number of D atoms and in the
    location of these atoms, so that the photoelectron spectra of deuterated samples
    are superpositions of the spectra of several isotopomers. The rotationally resolved
    spectra indicate a C(2v)-symmetric R0 structure for the ground electronic state
    of c-C3H₄⁺. Two vibrational modes of c-C3H₄⁺ are found to have vibrational wave
    numbers below 300 cm(-1), which is surprising for such a small cyclic hydrocarbon.
    The analysis of the isotopic shifts of the vibrational levels enabled the assignment
    of the lowest-frequency mode (fundamental wave number of ≈110 cm(-1) in c-C3H₄⁺)
    to the CH2 torsional mode (ν₈⁺, A2 symmetry) and of the second-lowest-frequency
    mode (≈210 cm(-1) in c-C3H₄⁺) to a mode combining a CH out-of-plane with a CH2
    rocking motion (ν₁₅⁺, B2 symmetry). The potential energy along the CH2 torsional
    coordinate is flat near the equilibrium structure and leads to a pronounced anharmonicity.
article_number: '064317'
article_processing_charge: No
article_type: original
author:
- first_name: K.
  full_name: Vasilatou, K.
  last_name: Vasilatou
- first_name: J. M.
  full_name: Michaud, J. M.
  last_name: Michaud
- first_name: Denitsa Rangelova
  full_name: Baykusheva, Denitsa Rangelova
  id: 71b4d059-2a03-11ee-914d-dfa3beed6530
  last_name: Baykusheva
- first_name: G.
  full_name: Grassi, G.
  last_name: Grassi
- first_name: F.
  full_name: Merkt, F.
  last_name: Merkt
citation:
  ama: 'Vasilatou K, Michaud JM, Baykusheva DR, Grassi G, Merkt F. The cyclopropene
    radical cation: Rovibrational level structure at low energies from high-resolution
    photoelectron spectra. <i>The Journal of Chemical Physics</i>. 2014;141(6). doi:<a
    href="https://doi.org/10.1063/1.4890744">10.1063/1.4890744</a>'
  apa: 'Vasilatou, K., Michaud, J. M., Baykusheva, D. R., Grassi, G., &#38; Merkt,
    F. (2014). The cyclopropene radical cation: Rovibrational level structure at low
    energies from high-resolution photoelectron spectra. <i>The Journal of Chemical
    Physics</i>. AIP Publishing. <a href="https://doi.org/10.1063/1.4890744">https://doi.org/10.1063/1.4890744</a>'
  chicago: 'Vasilatou, K., J. M. Michaud, Denitsa Rangelova Baykusheva, G. Grassi,
    and F. Merkt. “The Cyclopropene Radical Cation: Rovibrational Level Structure
    at Low Energies from High-Resolution Photoelectron Spectra.” <i>The Journal of
    Chemical Physics</i>. AIP Publishing, 2014. <a href="https://doi.org/10.1063/1.4890744">https://doi.org/10.1063/1.4890744</a>.'
  ieee: 'K. Vasilatou, J. M. Michaud, D. R. Baykusheva, G. Grassi, and F. Merkt, “The
    cyclopropene radical cation: Rovibrational level structure at low energies from
    high-resolution photoelectron spectra,” <i>The Journal of Chemical Physics</i>,
    vol. 141, no. 6. AIP Publishing, 2014.'
  ista: 'Vasilatou K, Michaud JM, Baykusheva DR, Grassi G, Merkt F. 2014. The cyclopropene
    radical cation: Rovibrational level structure at low energies from high-resolution
    photoelectron spectra. The Journal of Chemical Physics. 141(6), 064317.'
  mla: 'Vasilatou, K., et al. “The Cyclopropene Radical Cation: Rovibrational Level
    Structure at Low Energies from High-Resolution Photoelectron Spectra.” <i>The
    Journal of Chemical Physics</i>, vol. 141, no. 6, 064317, AIP Publishing, 2014,
    doi:<a href="https://doi.org/10.1063/1.4890744">10.1063/1.4890744</a>.'
  short: K. Vasilatou, J.M. Michaud, D.R. Baykusheva, G. Grassi, F. Merkt, The Journal
    of Chemical Physics 141 (2014).
date_created: 2023-08-10T06:38:30Z
date_published: 2014-08-14T00:00:00Z
date_updated: 2023-08-22T09:01:31Z
day: '14'
doi: 10.1063/1.4890744
extern: '1'
external_id:
  pmid:
  - '25134581'
intvolume: '       141'
issue: '6'
keyword:
- Physical and Theoretical Chemistry
- General Physics and Astronomy
language:
- iso: eng
month: '08'
oa_version: None
pmid: 1
publication: The Journal of Chemical Physics
publication_identifier:
  eissn:
  - 1089-7690
  issn:
  - 0021-9606
publication_status: published
publisher: AIP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'The cyclopropene radical cation: Rovibrational level structure at low energies
  from high-resolution photoelectron spectra'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 141
year: '2014'
...
---
_id: '14020'
abstract:
- lang: eng
  text: We report the observation of macroscopic field-free orientation, i.e., more
    than 73% of CO molecules pointing in the same direction. This is achieved through
    an all-optical scheme operating at high particle densities (>10(17)  cm(-3)) that
    combines one-color (ω) and two-color (ω+2ω) nonresonant femtosecond laser pulses.
    We show that the achieved orientation solely relies on the hyperpolarizability
    interaction as opposed to an ionization-depletion mechanism, thus, opening a wide
    range of applications. The achieved strong orientation enables us to reveal the
    molecular-frame anisotropies of the photorecombination amplitudes and phases caused
    by a shape resonance. The resonance appears as a local maximum in the even-harmonic
    emission around 28 eV. In contrast, the odd-harmonic emission is suppressed in
    this spectral region through the combined effects of an asymmetric photorecombination
    phase and a subcycle Stark effect, generic for polar molecules, that we experimentally
    identify.
article_number: '023001'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: P. M.
  full_name: Kraus, P. M.
  last_name: Kraus
- first_name: Denitsa Rangelova
  full_name: Baykusheva, Denitsa Rangelova
  id: 71b4d059-2a03-11ee-914d-dfa3beed6530
  last_name: Baykusheva
- first_name: H. J.
  full_name: Wörner, H. J.
  last_name: Wörner
citation:
  ama: Kraus PM, Baykusheva DR, Wörner HJ. Two-pulse field-free orientation reveals
    anisotropy of molecular shape resonance. <i>Physical Review Letters</i>. 2014;113(2).
    doi:<a href="https://doi.org/10.1103/physrevlett.113.023001">10.1103/physrevlett.113.023001</a>
  apa: Kraus, P. M., Baykusheva, D. R., &#38; Wörner, H. J. (2014). Two-pulse field-free
    orientation reveals anisotropy of molecular shape resonance. <i>Physical Review
    Letters</i>. American Physical Society. <a href="https://doi.org/10.1103/physrevlett.113.023001">https://doi.org/10.1103/physrevlett.113.023001</a>
  chicago: Kraus, P. M., Denitsa Rangelova Baykusheva, and H. J. Wörner. “Two-Pulse
    Field-Free Orientation Reveals Anisotropy of Molecular Shape Resonance.” <i>Physical
    Review Letters</i>. American Physical Society, 2014. <a href="https://doi.org/10.1103/physrevlett.113.023001">https://doi.org/10.1103/physrevlett.113.023001</a>.
  ieee: P. M. Kraus, D. R. Baykusheva, and H. J. Wörner, “Two-pulse field-free orientation
    reveals anisotropy of molecular shape resonance,” <i>Physical Review Letters</i>,
    vol. 113, no. 2. American Physical Society, 2014.
  ista: Kraus PM, Baykusheva DR, Wörner HJ. 2014. Two-pulse field-free orientation
    reveals anisotropy of molecular shape resonance. Physical Review Letters. 113(2),
    023001.
  mla: Kraus, P. M., et al. “Two-Pulse Field-Free Orientation Reveals Anisotropy of
    Molecular Shape Resonance.” <i>Physical Review Letters</i>, vol. 113, no. 2, 023001,
    American Physical Society, 2014, doi:<a href="https://doi.org/10.1103/physrevlett.113.023001">10.1103/physrevlett.113.023001</a>.
  short: P.M. Kraus, D.R. Baykusheva, H.J. Wörner, Physical Review Letters 113 (2014).
date_created: 2023-08-10T06:38:38Z
date_published: 2014-07-11T00:00:00Z
date_updated: 2023-08-22T09:02:56Z
day: '11'
doi: 10.1103/physrevlett.113.023001
extern: '1'
external_id:
  arxiv:
  - '1311.3923'
  pmid:
  - '25062172'
intvolume: '       113'
issue: '2'
keyword:
- General Physics and Astronomy
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1311.3923
month: '07'
oa: 1
oa_version: Preprint
pmid: 1
publication: Physical Review Letters
publication_identifier:
  eissn:
  - 1079-7114
  issn:
  - 0031-9007
publication_status: published
publisher: American Physical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Two-pulse field-free orientation reveals anisotropy of molecular shape resonance
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 113
year: '2014'
...
---
_id: '9166'
abstract:
- lang: eng
  text: Light-activated self-propelled colloids are synthesized and their active motion
    is studied using optical microscopy. We propose a versatile route using different
    photoactive materials, and demonstrate a multiwavelength activation and propulsion.
    Thanks to the photoelectrochemical properties of two semiconductor materials (α-Fe2O3
    and TiO2), a light with an energy higher than the bandgap triggers the reaction
    of decomposition of hydrogen peroxide and produces a chemical cloud around the
    particle. It induces a phoretic attraction with neighbouring colloids as well
    as an osmotic self-propulsion of the particle on the substrate. We use these mechanisms
    to form colloidal cargos as well as self-propelled particles where the light-activated
    component is embedded into a dielectric sphere. The particles are self-propelled
    along a direction otherwise randomized by thermal fluctuations, and exhibit a
    persistent random walk. For sufficient surface density, the particles spontaneously
    form ‘living crystals’ which are mobile, break apart and reform. Steering the
    particle with an external magnetic field, we show that the formation of the dense
    phase results from the collisions heads-on of the particles. This effect is intrinsically
    non-equilibrium and a novel principle of organization for systems without detailed
    balance. Engineering families of particles self-propelled by different wavelength
    demonstrate a good understanding of both the physics and the chemistry behind
    the system and points to a general route for designing new families of self-propelled
    particles.
article_number: '20130372'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Jérémie A
  full_name: Palacci, Jérémie A
  id: 8fb92548-2b22-11eb-b7c1-a3f0d08d7c7d
  last_name: Palacci
  orcid: 0000-0002-7253-9465
- first_name: S.
  full_name: Sacanna, S.
  last_name: Sacanna
- first_name: S.-H.
  full_name: Kim, S.-H.
  last_name: Kim
- first_name: G.-R.
  full_name: Yi, G.-R.
  last_name: Yi
- first_name: D. J.
  full_name: Pine, D. J.
  last_name: Pine
- first_name: P. M.
  full_name: Chaikin, P. M.
  last_name: Chaikin
citation:
  ama: 'Palacci JA, Sacanna S, Kim S-H, Yi G-R, Pine DJ, Chaikin PM. Light-activated
    self-propelled colloids. <i>Philosophical Transactions of the Royal Society A:
    Mathematical, Physical and Engineering Sciences</i>. 2014;372(2029). doi:<a href="https://doi.org/10.1098/rsta.2013.0372">10.1098/rsta.2013.0372</a>'
  apa: 'Palacci, J. A., Sacanna, S., Kim, S.-H., Yi, G.-R., Pine, D. J., &#38; Chaikin,
    P. M. (2014). Light-activated self-propelled colloids. <i>Philosophical Transactions
    of the Royal Society A: Mathematical, Physical and Engineering Sciences</i>. The
    Royal Society. <a href="https://doi.org/10.1098/rsta.2013.0372">https://doi.org/10.1098/rsta.2013.0372</a>'
  chicago: 'Palacci, Jérémie A, S. Sacanna, S.-H. Kim, G.-R. Yi, D. J. Pine, and P.
    M. Chaikin. “Light-Activated Self-Propelled Colloids.” <i>Philosophical Transactions
    of the Royal Society A: Mathematical, Physical and Engineering Sciences</i>. The
    Royal Society, 2014. <a href="https://doi.org/10.1098/rsta.2013.0372">https://doi.org/10.1098/rsta.2013.0372</a>.'
  ieee: 'J. A. Palacci, S. Sacanna, S.-H. Kim, G.-R. Yi, D. J. Pine, and P. M. Chaikin,
    “Light-activated self-propelled colloids,” <i>Philosophical Transactions of the
    Royal Society A: Mathematical, Physical and Engineering Sciences</i>, vol. 372,
    no. 2029. The Royal Society, 2014.'
  ista: 'Palacci JA, Sacanna S, Kim S-H, Yi G-R, Pine DJ, Chaikin PM. 2014. Light-activated
    self-propelled colloids. Philosophical Transactions of the Royal Society A: Mathematical,
    Physical and Engineering Sciences. 372(2029), 20130372.'
  mla: 'Palacci, Jérémie A., et al. “Light-Activated Self-Propelled Colloids.” <i>Philosophical
    Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences</i>,
    vol. 372, no. 2029, 20130372, The Royal Society, 2014, doi:<a href="https://doi.org/10.1098/rsta.2013.0372">10.1098/rsta.2013.0372</a>.'
  short: 'J.A. Palacci, S. Sacanna, S.-H. Kim, G.-R. Yi, D.J. Pine, P.M. Chaikin,
    Philosophical Transactions of the Royal Society A: Mathematical, Physical and
    Engineering Sciences 372 (2014).'
date_created: 2021-02-18T14:31:11Z
date_published: 2014-11-28T00:00:00Z
date_updated: 2021-02-22T10:44:16Z
day: '28'
doi: 10.1098/rsta.2013.0372
extern: '1'
external_id:
  arxiv:
  - '1410.7278'
  pmid:
  - '25332383'
intvolume: '       372'
issue: '2029'
keyword:
- General Engineering
- General Physics and Astronomy
- General Mathematics
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1098/rsta.2013.0372
month: '11'
oa: 1
oa_version: Published Version
pmid: 1
publication: 'Philosophical Transactions of the Royal Society A: Mathematical, Physical
  and Engineering Sciences'
publication_identifier:
  eissn:
  - 1471-2962
  issn:
  - 1364-503X
publication_status: published
publisher: The Royal Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Light-activated self-propelled colloids
type: journal_article
user_id: D865714E-FA4E-11E9-B85B-F5C5E5697425
volume: 372
year: '2014'
...
---
_id: '10384'
abstract:
- lang: eng
  text: 'Recent studies aimed at investigating artificial analogs of bacterial colonies
    have shown that low-density suspensions of self-propelled particles confined in
    two dimensions can assemble into finite aggregates that merge and split, but have
    a typical size that remains constant (living clusters). In this Letter, we address
    the problem of the formation of living clusters and crystals of active particles
    in three dimensions. We study two systems: self-propelled particles interacting
    via a generic attractive potential and colloids that can move toward each other
    as a result of active agents (e.g., by molecular motors). In both cases, fluidlike
    “living” clusters form. We explain this general feature in terms of the balance
    between active forces and regression to thermodynamic equilibrium. This balance
    can be quantified in terms of a dimensionless number that allows us to collapse
    the observed clustering behavior onto a universal curve. We also discuss how active
    motion affects the kinetics of crystal formation.'
acknowledgement: This work was supported by the ERC Advanced Grant 227758, the National
  Science Foundation under Career Grant No. DMR-0846426, the Wolfson Merit Award 2007/R3
  of the Royal Society of London and the EPSRC Programme Grant EP/I001352/1. BMM acknowledge
  T. Curk and A. Ballard for useful discussions. C. V. acknowledges financial support
  from a Juan de la Cierva Fellowship, from the Marie Curie Integration Grant PCIG-GA-2011-303941
  ANISOKINEQ, and from the National Project FIS2010- 16159. S. A-U acknowledges support
  from the Alexander von Humboldt Foundation.
article_number: '245702'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: B. M.
  full_name: Mognetti, B. M.
  last_name: Mognetti
- first_name: Anđela
  full_name: Šarić, Anđela
  id: bf63d406-f056-11eb-b41d-f263a6566d8b
  last_name: Šarić
  orcid: 0000-0002-7854-2139
- first_name: S.
  full_name: Angioletti-Uberti, S.
  last_name: Angioletti-Uberti
- first_name: A.
  full_name: Cacciuto, A.
  last_name: Cacciuto
- first_name: C.
  full_name: Valeriani, C.
  last_name: Valeriani
- first_name: D.
  full_name: Frenkel, D.
  last_name: Frenkel
citation:
  ama: Mognetti BM, Šarić A, Angioletti-Uberti S, Cacciuto A, Valeriani C, Frenkel
    D. Living clusters and crystals from low-density suspensions of active colloids.
    <i>Physical Review Letters</i>. 2013;111(24). doi:<a href="https://doi.org/10.1103/physrevlett.111.245702">10.1103/physrevlett.111.245702</a>
  apa: Mognetti, B. M., Šarić, A., Angioletti-Uberti, S., Cacciuto, A., Valeriani,
    C., &#38; Frenkel, D. (2013). Living clusters and crystals from low-density suspensions
    of active colloids. <i>Physical Review Letters</i>. American Physical Society.
    <a href="https://doi.org/10.1103/physrevlett.111.245702">https://doi.org/10.1103/physrevlett.111.245702</a>
  chicago: Mognetti, B. M., Anđela Šarić, S. Angioletti-Uberti, A. Cacciuto, C. Valeriani,
    and D. Frenkel. “Living Clusters and Crystals from Low-Density Suspensions of
    Active Colloids.” <i>Physical Review Letters</i>. American Physical Society, 2013.
    <a href="https://doi.org/10.1103/physrevlett.111.245702">https://doi.org/10.1103/physrevlett.111.245702</a>.
  ieee: B. M. Mognetti, A. Šarić, S. Angioletti-Uberti, A. Cacciuto, C. Valeriani,
    and D. Frenkel, “Living clusters and crystals from low-density suspensions of
    active colloids,” <i>Physical Review Letters</i>, vol. 111, no. 24. American Physical
    Society, 2013.
  ista: Mognetti BM, Šarić A, Angioletti-Uberti S, Cacciuto A, Valeriani C, Frenkel
    D. 2013. Living clusters and crystals from low-density suspensions of active colloids.
    Physical Review Letters. 111(24), 245702.
  mla: Mognetti, B. M., et al. “Living Clusters and Crystals from Low-Density Suspensions
    of Active Colloids.” <i>Physical Review Letters</i>, vol. 111, no. 24, 245702,
    American Physical Society, 2013, doi:<a href="https://doi.org/10.1103/physrevlett.111.245702">10.1103/physrevlett.111.245702</a>.
  short: B.M. Mognetti, A. Šarić, S. Angioletti-Uberti, A. Cacciuto, C. Valeriani,
    D. Frenkel, Physical Review Letters 111 (2013).
date_created: 2021-11-29T13:29:31Z
date_published: 2013-12-11T00:00:00Z
date_updated: 2021-11-29T14:05:19Z
day: '11'
doi: 10.1103/physrevlett.111.245702
extern: '1'
external_id:
  arxiv:
  - '1311.4681'
  pmid:
  - '24483677'
intvolume: '       111'
issue: '24'
keyword:
- general physics and astronomy
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1311.4681
month: '12'
oa: 1
oa_version: Preprint
pmid: 1
publication: Physical Review Letters
publication_identifier:
  eissn:
  - 1079-7114
  issn:
  - 0031-9007
publication_status: published
publisher: American Physical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Living clusters and crystals from low-density suspensions of active colloids
type: journal_article
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
volume: 111
year: '2013'
...
---
_id: '10387'
abstract:
- lang: eng
  text: We report numerical simulations of membrane tubulation driven by large colloidal
    particles. Using Monte Carlo simulations we study how the process depends on particle
    size and binding strength, and present accurate free energy calculations to sort
    out how tube formation compares with the competing budding process. We find that
    tube formation is a result of the collective behavior of the particles adhering
    on the surface, and it occurs for binding strengths that are smaller than those
    required for budding. We also find that long linear aggregates of particles forming
    on the membrane surface act as nucleation seeds for tubulation by lowering the
    free energy barrier associated to the process.
article_number: '188101'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Anđela
  full_name: Šarić, Anđela
  id: bf63d406-f056-11eb-b41d-f263a6566d8b
  last_name: Šarić
  orcid: 0000-0002-7854-2139
- first_name: Angelo
  full_name: Cacciuto, Angelo
  last_name: Cacciuto
citation:
  ama: Šarić A, Cacciuto A. Mechanism of membrane tube formation induced by adhesive
    nanocomponents. <i>Physical Review Letters</i>. 2012;109(18). doi:<a href="https://doi.org/10.1103/physrevlett.109.188101">10.1103/physrevlett.109.188101</a>
  apa: Šarić, A., &#38; Cacciuto, A. (2012). Mechanism of membrane tube formation
    induced by adhesive nanocomponents. <i>Physical Review Letters</i>. American Physical
    Society. <a href="https://doi.org/10.1103/physrevlett.109.188101">https://doi.org/10.1103/physrevlett.109.188101</a>
  chicago: Šarić, Anđela, and Angelo Cacciuto. “Mechanism of Membrane Tube Formation
    Induced by Adhesive Nanocomponents.” <i>Physical Review Letters</i>. American
    Physical Society, 2012. <a href="https://doi.org/10.1103/physrevlett.109.188101">https://doi.org/10.1103/physrevlett.109.188101</a>.
  ieee: A. Šarić and A. Cacciuto, “Mechanism of membrane tube formation induced by
    adhesive nanocomponents,” <i>Physical Review Letters</i>, vol. 109, no. 18. American
    Physical Society, 2012.
  ista: Šarić A, Cacciuto A. 2012. Mechanism of membrane tube formation induced by
    adhesive nanocomponents. Physical Review Letters. 109(18), 188101.
  mla: Šarić, Anđela, and Angelo Cacciuto. “Mechanism of Membrane Tube Formation Induced
    by Adhesive Nanocomponents.” <i>Physical Review Letters</i>, vol. 109, no. 18,
    188101, American Physical Society, 2012, doi:<a href="https://doi.org/10.1103/physrevlett.109.188101">10.1103/physrevlett.109.188101</a>.
  short: A. Šarić, A. Cacciuto, Physical Review Letters 109 (2012).
date_created: 2021-11-29T14:08:00Z
date_published: 2012-10-31T00:00:00Z
date_updated: 2021-11-29T14:29:25Z
day: '31'
doi: 10.1103/physrevlett.109.188101
extern: '1'
external_id:
  arxiv:
  - '1206.3528'
  pmid:
  - '23215334'
intvolume: '       109'
issue: '18'
keyword:
- general physics and astronomy
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1206.3528
month: '10'
oa: 1
oa_version: Preprint
pmid: 1
publication: Physical Review Letters
publication_identifier:
  eissn:
  - 1079-7114
  issn:
  - 0031-9007
publication_status: published
publisher: American Physical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Mechanism of membrane tube formation induced by adhesive nanocomponents
type: journal_article
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
volume: 109
year: '2012'
...
---
_id: '10388'
abstract:
- lang: eng
  text: Using computer simulations, we show that lipid membranes can mediate linear
    aggregation of spherical nanoparticles binding to it for a wide range of biologically
    relevant bending rigidities. This result is in net contrast with the isotropic
    aggregation of nanoparticles on fluid interfaces or the expected clustering of
    isotropic insertions in biological membranes. We present a phase diagram indicating
    where linear aggregation is expected and compute explicitly the free-energy barriers
    associated with linear and isotropic aggregation. Finally, we provide simple scaling
    arguments to explain this phenomenology.
acknowledgement: "This work was supported by the National Science Foundation under
  Career Grant No. DMR-0846426.\r\n"
article_number: '118101'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Anđela
  full_name: Šarić, Anđela
  id: bf63d406-f056-11eb-b41d-f263a6566d8b
  last_name: Šarić
  orcid: 0000-0002-7854-2139
- first_name: Angelo
  full_name: Cacciuto, Angelo
  last_name: Cacciuto
citation:
  ama: Šarić A, Cacciuto A. Fluid membranes can drive linear aggregation of adsorbed
    spherical nanoparticles. <i>Physical Review Letters</i>. 2012;108(11). doi:<a
    href="https://doi.org/10.1103/physrevlett.108.118101">10.1103/physrevlett.108.118101</a>
  apa: Šarić, A., &#38; Cacciuto, A. (2012). Fluid membranes can drive linear aggregation
    of adsorbed spherical nanoparticles. <i>Physical Review Letters</i>. American
    Physical Society. <a href="https://doi.org/10.1103/physrevlett.108.118101">https://doi.org/10.1103/physrevlett.108.118101</a>
  chicago: Šarić, Anđela, and Angelo Cacciuto. “Fluid Membranes Can Drive Linear Aggregation
    of Adsorbed Spherical Nanoparticles.” <i>Physical Review Letters</i>. American
    Physical Society, 2012. <a href="https://doi.org/10.1103/physrevlett.108.118101">https://doi.org/10.1103/physrevlett.108.118101</a>.
  ieee: A. Šarić and A. Cacciuto, “Fluid membranes can drive linear aggregation of
    adsorbed spherical nanoparticles,” <i>Physical Review Letters</i>, vol. 108, no.
    11. American Physical Society, 2012.
  ista: Šarić A, Cacciuto A. 2012. Fluid membranes can drive linear aggregation of
    adsorbed spherical nanoparticles. Physical Review Letters. 108(11), 118101.
  mla: Šarić, Anđela, and Angelo Cacciuto. “Fluid Membranes Can Drive Linear Aggregation
    of Adsorbed Spherical Nanoparticles.” <i>Physical Review Letters</i>, vol. 108,
    no. 11, 118101, American Physical Society, 2012, doi:<a href="https://doi.org/10.1103/physrevlett.108.118101">10.1103/physrevlett.108.118101</a>.
  short: A. Šarić, A. Cacciuto, Physical Review Letters 108 (2012).
date_created: 2021-11-29T14:30:05Z
date_published: 2012-03-14T00:00:00Z
date_updated: 2021-11-29T15:12:13Z
day: '14'
doi: 10.1103/physrevlett.108.118101
extern: '1'
external_id:
  arxiv:
  - '1201.0036'
  pmid:
  - '22540513'
intvolume: '       108'
issue: '11'
keyword:
- general physics and astronomy
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1201.0036
month: '03'
oa: 1
oa_version: Preprint
pmid: 1
publication: Physical Review Letters
publication_identifier:
  eissn:
  - 1079-7114
  issn:
  - 0031-9007
publication_status: published
publisher: American Physical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Fluid membranes can drive linear aggregation of adsorbed spherical nanoparticles
type: journal_article
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
volume: 108
year: '2012'
...
---
_id: '10128'
abstract:
- lang: eng
  text: 'An extensive computational study of the conformational preferences of three
    capped dipeptides: Ac-Xxx-Phe-NH2, Xxx = Gly, Ala, Val is reported. On the basis
    of local second-order Møller–Plesset perturbation theory (LMP2) and DFT computations
    we were able to identify the experimentally observed conformers as γL–γL(g−) and
    β-turn I(g+) in Ac-Gly-Phe-NH2, and Ac-Ala-Phe-NH2, and as the closely related
    γL(g+)–γL(g−) and β-turn I(a,g+) in Ac-Val-Phe-NH2. In contrast to the experimental
    observation that peptides with bulky side chain have a propensity for β-turns,
    we show that in Ac-Val-Phe-NH2 the minimum energy structure corresponds to the
    experimentally non detected β-strand.'
acknowledgement: This work has been supported by the MZOŠ projects 098-0352851-2921
  and 119-1191342-2959.
article_processing_charge: No
article_type: original
author:
- first_name: Anđela
  full_name: Šarić, Anđela
  id: bf63d406-f056-11eb-b41d-f263a6566d8b
  last_name: Šarić
  orcid: 0000-0002-7854-2139
- first_name: T.
  full_name: Hrenar, T.
  last_name: Hrenar
- first_name: M.
  full_name: Mališ, M.
  last_name: Mališ
- first_name: N.
  full_name: Došlić, N.
  last_name: Došlić
citation:
  ama: Šarić A, Hrenar T, Mališ M, Došlić N. Quantum mechanical study of secondary
    structure formation in protected dipeptides. <i>Physical Chemistry Chemical Physics</i>.
    2010;12(18):4678-4685. doi:<a href="https://doi.org/10.1039/b923041f">10.1039/b923041f</a>
  apa: Šarić, A., Hrenar, T., Mališ, M., &#38; Došlić, N. (2010). Quantum mechanical
    study of secondary structure formation in protected dipeptides. <i>Physical Chemistry
    Chemical Physics</i>. Royal Society of Chemistry . <a href="https://doi.org/10.1039/b923041f">https://doi.org/10.1039/b923041f</a>
  chicago: Šarić, Anđela, T. Hrenar, M. Mališ, and N. Došlić. “Quantum Mechanical
    Study of Secondary Structure Formation in Protected Dipeptides.” <i>Physical Chemistry
    Chemical Physics</i>. Royal Society of Chemistry , 2010. <a href="https://doi.org/10.1039/b923041f">https://doi.org/10.1039/b923041f</a>.
  ieee: A. Šarić, T. Hrenar, M. Mališ, and N. Došlić, “Quantum mechanical study of
    secondary structure formation in protected dipeptides,” <i>Physical Chemistry
    Chemical Physics</i>, vol. 12, no. 18. Royal Society of Chemistry , pp. 4678–4685,
    2010.
  ista: Šarić A, Hrenar T, Mališ M, Došlić N. 2010. Quantum mechanical study of secondary
    structure formation in protected dipeptides. Physical Chemistry Chemical Physics.
    12(18), 4678–4685.
  mla: Šarić, Anđela, et al. “Quantum Mechanical Study of Secondary Structure Formation
    in Protected Dipeptides.” <i>Physical Chemistry Chemical Physics</i>, vol. 12,
    no. 18, Royal Society of Chemistry , 2010, pp. 4678–85, doi:<a href="https://doi.org/10.1039/b923041f">10.1039/b923041f</a>.
  short: A. Šarić, T. Hrenar, M. Mališ, N. Došlić, Physical Chemistry Chemical Physics
    12 (2010) 4678–4685.
date_created: 2021-10-12T08:44:34Z
date_published: 2010-03-16T00:00:00Z
date_updated: 2021-10-12T09:49:22Z
day: '16'
doi: 10.1039/b923041f
extern: '1'
external_id:
  pmid:
  - '20428547'
intvolume: '        12'
issue: '18'
keyword:
- Physical and Theoretical Chemistry
- General Physics and Astronomy
language:
- iso: eng
main_file_link:
- url: https://europepmc.org/article/med/20428547
month: '03'
oa_version: None
page: 4678-4685
pmid: 1
publication: Physical Chemistry Chemical Physics
publication_identifier:
  issn:
  - 1463-9076
  - 1463-9084
publication_status: published
publisher: 'Royal Society of Chemistry '
quality_controlled: '1'
status: public
title: Quantum mechanical study of secondary structure formation in protected dipeptides
type: journal_article
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
volume: 12
year: '2010'
...
---
_id: '10391'
abstract:
- lang: eng
  text: We use numerical simulations to show how a fully flexible filament binding
    to a deformable cylindrical surface may acquire a macroscopic persistence length
    and a helical conformation. This is a result of the nontrivial elastic response
    to deformations of elastic sheets. We find that the filament’s helical pitch is
    completely determined by the mechanical properties of the surface, and can be
    easily tuned by varying the surface stretching rigidity. We propose simple scaling
    arguments to understand the physical mechanism behind this phenomenon and present
    a phase diagram indicating under what conditions one should expect a fully flexible
    chain to behave as a helical semiflexible filament. Finally, we discuss the implications
    of our results.
acknowledgement: This work was supported by the National Science Foundation under
  Career Grant No. DMR-0846426.
article_number: '226101'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Anđela
  full_name: Šarić, Anđela
  id: bf63d406-f056-11eb-b41d-f263a6566d8b
  last_name: Šarić
  orcid: 0000-0002-7854-2139
- first_name: Josep C.
  full_name: Pàmies, Josep C.
  last_name: Pàmies
- first_name: Angelo
  full_name: Cacciuto, Angelo
  last_name: Cacciuto
citation:
  ama: Šarić A, Pàmies JC, Cacciuto A. Effective elasticity of a flexible filament
    bound to a deformable cylindrical surface. <i>Physical Review Letters</i>. 2010;104(22).
    doi:<a href="https://doi.org/10.1103/physrevlett.104.226101">10.1103/physrevlett.104.226101</a>
  apa: Šarić, A., Pàmies, J. C., &#38; Cacciuto, A. (2010). Effective elasticity of
    a flexible filament bound to a deformable cylindrical surface. <i>Physical Review
    Letters</i>. American Physical Society. <a href="https://doi.org/10.1103/physrevlett.104.226101">https://doi.org/10.1103/physrevlett.104.226101</a>
  chicago: Šarić, Anđela, Josep C. Pàmies, and Angelo Cacciuto. “Effective Elasticity
    of a Flexible Filament Bound to a Deformable Cylindrical Surface.” <i>Physical
    Review Letters</i>. American Physical Society, 2010. <a href="https://doi.org/10.1103/physrevlett.104.226101">https://doi.org/10.1103/physrevlett.104.226101</a>.
  ieee: A. Šarić, J. C. Pàmies, and A. Cacciuto, “Effective elasticity of a flexible
    filament bound to a deformable cylindrical surface,” <i>Physical Review Letters</i>,
    vol. 104, no. 22. American Physical Society, 2010.
  ista: Šarić A, Pàmies JC, Cacciuto A. 2010. Effective elasticity of a flexible filament
    bound to a deformable cylindrical surface. Physical Review Letters. 104(22), 226101.
  mla: Šarić, Anđela, et al. “Effective Elasticity of a Flexible Filament Bound to
    a Deformable Cylindrical Surface.” <i>Physical Review Letters</i>, vol. 104, no.
    22, 226101, American Physical Society, 2010, doi:<a href="https://doi.org/10.1103/physrevlett.104.226101">10.1103/physrevlett.104.226101</a>.
  short: A. Šarić, J.C. Pàmies, A. Cacciuto, Physical Review Letters 104 (2010).
date_created: 2021-11-29T15:14:33Z
date_published: 2010-06-03T00:00:00Z
date_updated: 2021-11-30T08:11:19Z
day: '03'
doi: 10.1103/physrevlett.104.226101
extern: '1'
external_id:
  arxiv:
  - '1005.2429'
  pmid:
  - '20867183'
intvolume: '       104'
issue: '22'
keyword:
- general physics and astronomy
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1005.2429
month: '06'
oa: 1
oa_version: Preprint
pmid: 1
publication: Physical Review Letters
publication_identifier:
  eissn:
  - 1079-7114
  issn:
  - 0031-9007
publication_status: published
publisher: American Physical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Effective elasticity of a flexible filament bound to a deformable cylindrical
  surface
type: journal_article
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
volume: 104
year: '2010'
...
---
_id: '8527'
abstract:
- lang: eng
  text: We introduce a new potential-theoretic definition of the dimension spectrum  of
    a probability measure for q > 1 and explain its relation to prior definitions.
    We apply this definition to prove that if  and  is a Borel probability measure
    with compact support in , then under almost every linear transformation from  to
    , the q-dimension of the image of  is ; in particular, the q-dimension of  is
    preserved provided . We also present results on the preservation of information
    dimension  and pointwise dimension. Finally, for  and q > 2 we give examples for
    which  is not preserved by any linear transformation into . All results for typical
    linear transformations are also proved for typical (in the sense of prevalence)
    continuously differentiable functions.
article_processing_charge: No
article_type: original
author:
- first_name: Brian R
  full_name: Hunt, Brian R
  last_name: Hunt
- first_name: Vadim
  full_name: Kaloshin, Vadim
  id: FE553552-CDE8-11E9-B324-C0EBE5697425
  last_name: Kaloshin
  orcid: 0000-0002-6051-2628
citation:
  ama: Hunt BR, Kaloshin V. How projections affect the dimension spectrum of fractal
    measures. <i>Nonlinearity</i>. 1997;10(5):1031-1046. doi:<a href="https://doi.org/10.1088/0951-7715/10/5/002">10.1088/0951-7715/10/5/002</a>
  apa: Hunt, B. R., &#38; Kaloshin, V. (1997). How projections affect the dimension
    spectrum of fractal measures. <i>Nonlinearity</i>. IOP Publishing. <a href="https://doi.org/10.1088/0951-7715/10/5/002">https://doi.org/10.1088/0951-7715/10/5/002</a>
  chicago: Hunt, Brian R, and Vadim Kaloshin. “How Projections Affect the Dimension
    Spectrum of Fractal Measures.” <i>Nonlinearity</i>. IOP Publishing, 1997. <a href="https://doi.org/10.1088/0951-7715/10/5/002">https://doi.org/10.1088/0951-7715/10/5/002</a>.
  ieee: B. R. Hunt and V. Kaloshin, “How projections affect the dimension spectrum
    of fractal measures,” <i>Nonlinearity</i>, vol. 10, no. 5. IOP Publishing, pp.
    1031–1046, 1997.
  ista: Hunt BR, Kaloshin V. 1997. How projections affect the dimension spectrum of
    fractal measures. Nonlinearity. 10(5), 1031–1046.
  mla: Hunt, Brian R., and Vadim Kaloshin. “How Projections Affect the Dimension Spectrum
    of Fractal Measures.” <i>Nonlinearity</i>, vol. 10, no. 5, IOP Publishing, 1997,
    pp. 1031–46, doi:<a href="https://doi.org/10.1088/0951-7715/10/5/002">10.1088/0951-7715/10/5/002</a>.
  short: B.R. Hunt, V. Kaloshin, Nonlinearity 10 (1997) 1031–1046.
date_created: 2020-09-18T10:50:41Z
date_published: 1997-06-19T00:00:00Z
date_updated: 2021-01-12T08:19:53Z
day: '19'
doi: 10.1088/0951-7715/10/5/002
extern: '1'
intvolume: '        10'
issue: '5'
keyword:
- Mathematical Physics
- General Physics and Astronomy
- Applied Mathematics
- Statistical and Nonlinear Physics
language:
- iso: eng
month: '06'
oa_version: None
page: 1031-1046
publication: Nonlinearity
publication_identifier:
  issn:
  - 0951-7715
  - 1361-6544
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
status: public
title: How projections affect the dimension spectrum of fractal measures
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 10
year: '1997'
...
