---
_id: '19623'
abstract:
- lang: eng
  text: "Persistent revivals recently observed in Rydberg atom simulators have challenged
    our understanding of thermalization and attracted much interest to the concept
    of quantum many-body scars (QMBSs). QMBSs are non-thermal highly excited eigenstates
    that coexist with typical eigenstates in the spectrum of many-body Hamiltonians,
    and have since been reported in multiple theoretical models, including the so-called
    PXP model, approximately realized by Rydberg simulators. At the same time, questions
    of how common QMBSs are and in what models they are physically realized remain
    open. In this Letter, we demonstrate that QMBSs exist in a broader family of models
    that includes and generalizes PXP to longer-range constraints and states with
    different periodicity. We show that in each model, multiple QMBS families can
    be found. Each of them relies on a different approximate \U0001D530\U0001D532⁡(2)
    algebra, leading to oscillatory dynamics in all cases. However, in contrast to
    the PXP model, their observation requires launching dynamics from weakly entangled
    initial states rather than from a product state. QMBSs reported here may be experimentally
    probed using Rydberg atom simulator in the regime of longer-range Rydberg blockades."
acknowledged_ssus:
- _id: ScienComp
acknowledgement: The authors are grateful to Zlatko Papić, Dolev Bluvstein, Nishad
  Maskara, Marcello Dalmonte, Thomas Iadecola, and Johannes Feldmeier for insightful
  discussions. A. K., M. L., and M. S. acknowledge support by the European Research
  Council under the European Union’s Horizon 2020 research and innovation program
  (Grant Agreement No. 850899). J.-Y. D. acknowledges funding from the European Union’s
  Horizon 2020 research and innovation program under the Marie Skłodowska-Curie Grant
  Agreement No. 101034413.
article_processing_charge: No
author:
- first_name: Jean-Yves Marc
  full_name: Desaules, Jean-Yves Marc
  id: 6c292945-a610-11ed-9eec-c3be1ad62a80
  last_name: Desaules
  orcid: 0000-0002-3749-6375
citation:
  ama: Desaules J-YM. Research Data for “Quantum Many-Body Scars beyond the PXP Model
    in Rydberg Simulators.” 2025. doi:<a href="https://doi.org/10.15479/AT:ISTA:19623">10.15479/AT:ISTA:19623</a>
  apa: Desaules, J.-Y. M. (2025). Research Data for “Quantum Many-Body Scars beyond
    the PXP Model in Rydberg Simulators.” Institute of Science and Technology Austria.
    <a href="https://doi.org/10.15479/AT:ISTA:19623">https://doi.org/10.15479/AT:ISTA:19623</a>
  chicago: Desaules, Jean-Yves Marc. “Research Data for ‘Quantum Many-Body Scars beyond
    the PXP Model in Rydberg Simulators.’” Institute of Science and Technology Austria,
    2025. <a href="https://doi.org/10.15479/AT:ISTA:19623">https://doi.org/10.15479/AT:ISTA:19623</a>.
  ieee: J.-Y. M. Desaules, “Research Data for ‘Quantum Many-Body Scars beyond the
    PXP Model in Rydberg Simulators.’” Institute of Science and Technology Austria,
    2025.
  ista: Desaules J-YM. 2025. Research Data for ‘Quantum Many-Body Scars beyond the
    PXP Model in Rydberg Simulators’, Institute of Science and Technology Austria,
    <a href="https://doi.org/10.15479/AT:ISTA:19623">10.15479/AT:ISTA:19623</a>.
  mla: Desaules, Jean-Yves Marc. <i>Research Data for “Quantum Many-Body Scars beyond
    the PXP Model in Rydberg Simulators.”</i> Institute of Science and Technology
    Austria, 2025, doi:<a href="https://doi.org/10.15479/AT:ISTA:19623">10.15479/AT:ISTA:19623</a>.
  short: J.-Y.M. Desaules, (2025).
contributor:
- contributor_type: researcher
  first_name: Aron
  id: ade85a9c-3200-11ee-973b-91c1eb240410
  last_name: Kerschbaumer
- contributor_type: researcher
  first_name: Marko
  last_name: Ljubotina
- contributor_type: researcher
  first_name: Maksym
  id: 47809E7E-F248-11E8-B48F-1D18A9856A87
  last_name: Serbyn
  orcid: 0000-0002-2399-5827
- contributor_type: researcher
  first_name: Jean-Yves Marc
  id: 6c292945-a610-11ed-9eec-c3be1ad62a80
  last_name: Desaules
  orcid: 0000-0002-3749-6375
corr_author: '1'
date_created: 2025-04-24T19:58:46Z
date_published: 2025-04-24T00:00:00Z
date_updated: 2026-06-10T08:40:52Z
day: '24'
ddc:
- '530'
department:
- _id: MaSe
doi: 10.15479/AT:ISTA:19623
ec_funded: 1
file:
- access_level: open_access
  checksum: d073314c4dc95d93feaadbff188ce4a1
  content_type: application/zip
  creator: jdesaule
  date_created: 2025-05-05T07:14:17Z
  date_updated: 2025-05-05T07:14:17Z
  file_id: '19646'
  file_name: Data+Code.zip
  file_size: 583478621
  relation: main_file
  success: 1
- access_level: open_access
  checksum: d386a2364fb1147ef6dad30ad029c080
  content_type: text/plain
  creator: jdesaule
  date_created: 2025-05-05T07:13:46Z
  date_updated: 2025-05-05T07:13:46Z
  file_id: '19647'
  file_name: readme.txt
  file_size: 15856
  relation: main_file
  success: 1
file_date_updated: 2025-05-05T07:14:17Z
fulldoi: https://doi.org/10.15479/AT:ISTA:19623
has_accepted_license: '1'
keyword:
- quantum many-body scars
- non-equilibrium physics
- Rydberg atoms
month: '04'
oa: 1
oa_version: Published Version
project:
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
  call_identifier: H2020
  grant_number: '101034413'
  name: 'IST-BRIDGE: International postdoctoral program'
- _id: 23841C26-32DE-11EA-91FC-C7463DDC885E
  call_identifier: H2020
  grant_number: '850899'
  name: 'Non-Ergodic Quantum Matter: Universality, Dynamics and Control'
publisher: Institute of Science and Technology Austria
related_material:
  record:
  - id: '19664'
    relation: used_in_publication
    status: public
status: public
title: Research Data for "Quantum Many-Body Scars beyond the PXP Model in Rydberg
  Simulators"
tmp:
  image: /images/cc_by_nc.png
  legal_code_url: https://creativecommons.org/licenses/by-nc/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)
  short: CC BY-NC (4.0)
type: research_data
user_id: 68b8ca59-c5b3-11ee-8790-cd641c68093d
year: '2025'
...
---
OA_place: repository
OA_type: green
_id: '10011'
abstract:
- lang: eng
  text: We propose a new weak solution concept for (two-phase) mean curvature flow
    which enjoys both (unconditional) existence and (weak-strong) uniqueness properties.
    These solutions are evolving varifolds, just as in Brakke's formulation, but are
    coupled to the phase volumes by a simple transport equation. First, we show that,
    in the exact same setup as in Ilmanen's proof [J. Differential Geom. 38, 417-461,
    (1993)], any limit point of solutions to the Allen-Cahn equation is a varifold
    solution in our sense. Second, we prove that any calibrated flow in the sense
    of Fischer et al. [arXiv:2003.05478] - and hence any classical solution to mean
    curvature flow-is unique in the class of our new varifold solutions. This is in
    sharp contrast to the case of Brakke flows, which a priori may disappear at any
    given time and are therefore fatally non-unique. Finally, we propose an extension
    of the solution concept to the multi-phase case which is at least guaranteed to
    satisfy a weak-strong uniqueness principle.
acknowledgement: This project has received funding from the European Research Council
  (ERC) under the European Union’s Horizon 2020 research and innovation programme
  (grant agreement No 948819), and from the Deutsche Forschungsgemeinschaft (DFG,
  German Research Foundation) under Germany’s Excellence Strategy – EXC-2047/1 – 390685813.
  The content of this paper was developed and parts of it were written during a visit
  of the first author to the Hausdorff Center of Mathematics (HCM), University of
  Bonn. The hospitality and the support of HCM are gratefully acknowledged.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Sebastian
  full_name: Hensel, Sebastian
  id: 4D23B7DA-F248-11E8-B48F-1D18A9856A87
  last_name: Hensel
  orcid: 0000-0001-7252-8072
- first_name: Tim
  full_name: Laux, Tim
  last_name: Laux
citation:
  ama: 'Hensel S, Laux T. A new varifold solution concept for mean curvature flow:
    Convergence of  the Allen-Cahn equation and weak-strong uniqueness. <i>Journal
    of Differential Geometry</i>. 2025;130:209-268. doi:<a href="https://doi.org/10.4310/jdg/1747065796">10.4310/jdg/1747065796</a>'
  apa: 'Hensel, S., &#38; Laux, T. (2025). A new varifold solution concept for mean
    curvature flow: Convergence of  the Allen-Cahn equation and weak-strong uniqueness.
    <i>Journal of Differential Geometry</i>. International Press of Boston. <a href="https://doi.org/10.4310/jdg/1747065796">https://doi.org/10.4310/jdg/1747065796</a>'
  chicago: 'Hensel, Sebastian, and Tim Laux. “A New Varifold Solution Concept for
    Mean Curvature Flow: Convergence of  the Allen-Cahn Equation and Weak-Strong Uniqueness.”
    <i>Journal of Differential Geometry</i>. International Press of Boston, 2025.
    <a href="https://doi.org/10.4310/jdg/1747065796">https://doi.org/10.4310/jdg/1747065796</a>.'
  ieee: 'S. Hensel and T. Laux, “A new varifold solution concept for mean curvature
    flow: Convergence of  the Allen-Cahn equation and weak-strong uniqueness,” <i>Journal
    of Differential Geometry</i>, vol. 130. International Press of Boston, pp. 209–268,
    2025.'
  ista: 'Hensel S, Laux T. 2025. A new varifold solution concept for mean curvature
    flow: Convergence of  the Allen-Cahn equation and weak-strong uniqueness. Journal
    of Differential Geometry. 130, 209–268.'
  mla: 'Hensel, Sebastian, and Tim Laux. “A New Varifold Solution Concept for Mean
    Curvature Flow: Convergence of  the Allen-Cahn Equation and Weak-Strong Uniqueness.”
    <i>Journal of Differential Geometry</i>, vol. 130, International Press of Boston,
    2025, pp. 209–68, doi:<a href="https://doi.org/10.4310/jdg/1747065796">10.4310/jdg/1747065796</a>.'
  short: S. Hensel, T. Laux, Journal of Differential Geometry 130 (2025) 209–268.
corr_author: '1'
das_tickbox: '1'
date_created: 2021-09-13T12:17:10Z
date_published: 2025-05-01T00:00:00Z
date_updated: 2026-07-06T13:37:21Z
day: '01'
department:
- _id: JuFi
doi: 10.4310/jdg/1747065796
ec_funded: 1
external_id:
  arxiv:
  - '2109.04233'
fulldoi: https://doi.org/10.4310/jdg/1747065796
intvolume: '       130'
keyword:
- Mean curvature flow
- gradient flows
- varifolds
- weak solutions
- weak-strong uniqueness
- calibrated geometry
- gradient-flow calibrations
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2109.04233
month: '05'
oa: 1
oa_version: Preprint
page: 209-268
project:
- _id: 0aa76401-070f-11eb-9043-b5bb049fa26d
  call_identifier: H2020
  grant_number: '948819'
  name: Bridging Scales in Random Materials
publication: Journal of Differential Geometry
publication_identifier:
  eissn:
  - 1945-743X
  issn:
  - 0022-040X
publication_status: published
publisher: International Press of Boston
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'A new varifold solution concept for mean curvature flow: Convergence of  the
  Allen-Cahn equation and weak-strong uniqueness'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 130
year: '2025'
...
---
OA_place: repository
OA_type: green
_id: '22026'
abstract:
- lang: eng
  text: We address two pressing questions in the theory of the Korteweg–de Vries (KdV)
    equation. First, we show the uniqueness of solutions to KdV that are merely bounded,
    without any further decay, regularity, periodicity, or almost periodicity assumptions.
    The second question, emphasized by Deift, regards whether almost periodic initial
    data leads to almost periodic solutions to KdV. Building on the new observation
    that this is false for the Airy equation, we construct an example of almost periodic
    initial data whose KdV evolution remains bounded, but fails to be almost periodic
    at a later time. Our uniqueness result ensures that the solution constructed is
    the unique development of this initial data.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Andreia
  full_name: Chapouto, Andreia
  last_name: Chapouto
- first_name: Rowan
  full_name: Killip, Rowan
  last_name: Killip
- first_name: Monica
  full_name: Visan, Monica
  id: 056daca0-b8d1-11f0-964f-f91054abf8ca
  last_name: Visan
citation:
  ama: 'Chapouto A, Killip R, Vişan M. Bounded solutions of KdV: Uniqueness and the
    loss of almost periodicity. <i>Duke Mathematical Journal</i>. 2024;173(7):1227-1267.
    doi:<a href="https://doi.org/10.1215/00127094-2023-0035">10.1215/00127094-2023-0035</a>'
  apa: 'Chapouto, A., Killip, R., &#38; Vişan, M. (2024). Bounded solutions of KdV:
    Uniqueness and the loss of almost periodicity. <i>Duke Mathematical Journal</i>.
    Duke University Press. <a href="https://doi.org/10.1215/00127094-2023-0035">https://doi.org/10.1215/00127094-2023-0035</a>'
  chicago: 'Chapouto, Andreia, Rowan Killip, and Monica Vişan. “Bounded Solutions
    of KdV: Uniqueness and the Loss of Almost Periodicity.” <i>Duke Mathematical Journal</i>.
    Duke University Press, 2024. <a href="https://doi.org/10.1215/00127094-2023-0035">https://doi.org/10.1215/00127094-2023-0035</a>.'
  ieee: 'A. Chapouto, R. Killip, and M. Vişan, “Bounded solutions of KdV: Uniqueness
    and the loss of almost periodicity,” <i>Duke Mathematical Journal</i>, vol. 173,
    no. 7. Duke University Press, pp. 1227–1267, 2024.'
  ista: 'Chapouto A, Killip R, Vişan M. 2024. Bounded solutions of KdV: Uniqueness
    and the loss of almost periodicity. Duke Mathematical Journal. 173(7), 1227–1267.'
  mla: 'Chapouto, Andreia, et al. “Bounded Solutions of KdV: Uniqueness and the Loss
    of Almost Periodicity.” <i>Duke Mathematical Journal</i>, vol. 173, no. 7, Duke
    University Press, 2024, pp. 1227–67, doi:<a href="https://doi.org/10.1215/00127094-2023-0035">10.1215/00127094-2023-0035</a>.'
  short: A. Chapouto, R. Killip, M. Vişan, Duke Mathematical Journal 173 (2024) 1227–1267.
das_tickbox: '1'
date_created: 2026-06-19T07:34:05Z
date_published: 2024-05-15T00:00:00Z
date_updated: 2026-06-22T10:32:25Z
day: '15'
doi: 10.1215/00127094-2023-0035
extern: '1'
external_id:
  arxiv:
  - '2209.07501'
fulldoi: https://doi.org/10.1215/00127094-2023-0035
intvolume: '       173'
issue: '7'
keyword:
- Almost-periodic solutions
- Korteweg–de Vries
- unconditional uniqueness
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2209.07501
month: '05'
oa: 1
oa_version: Preprint
page: 1227-1267
publication: Duke Mathematical Journal
publication_identifier:
  issn:
  - 0012-7094
publication_status: published
publisher: Duke University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Bounded solutions of KdV: Uniqueness and the loss of almost periodicity'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 173
year: '2024'
...
---
_id: '17214'
abstract:
- lang: eng
  text: 'Current numerical algorithms for simulating friction fall in one of two camps:
    smooth solvers sacrifice the stable treatment of static friction in exchange for
    fast convergence, and non-smooth solvers accurately compute friction at convergence
    rates that are often prohibitive for large graphics applications. We introduce
    a novel bridge between these two ideas that computes static and dynamic friction
    stably and efficiently. Our key idea is to convert the highly constrained non-smooth
    problem into an unconstrained smooth problem using logarithmic barriers that converges
    to the exact solution as accuracy increases. We phrase the problem as an interior
    point primal-dual problem that can be solved efficiently with Newton iteration.
    We observe quadratic convergence despite the non-smooth nature of the original
    problem, and our method is well-suited for large systems of tightly packed objects
    with many contact points. We demonstrate the efficacy of our method with stable
    piles of grains and stacks of objects, complex granular flows, and robust interlocking
    assemblies of rigid bodies.'
acknowledgement: We thank Vincent Acary for his help with Siconos, as well as the
  anonymous reviewers and the members of the Visual Computing Group at ISTA for their
  helpful comments. This research was funded in part by the European Union (ERC-2021-COG
  101045083 CoDiNA).
article_processing_charge: Yes (via OA deal)
author:
- first_name: Yi-Lu
  full_name: Chen, Yi-Lu
  id: 0b467602-dbcd-11ea-9d1d-ed480aa46b70
  last_name: Chen
  orcid: 0009-0005-0723-0655
- first_name: Mickaël
  full_name: Ly, Mickaël
  id: 6340d7f0-b48d-11eb-b10d-b7487e71d9f1
  last_name: Ly
- first_name: Christopher J
  full_name: Wojtan, Christopher J
  id: 3C61F1D2-F248-11E8-B48F-1D18A9856A87
  last_name: Wojtan
  orcid: 0000-0001-6646-5546
citation:
  ama: 'Chen Y-L, Ly M, Wojtan C. Primal-dual non-smooth friction for rigid body animation.
    In: <i>Special Interest Group on Computer Graphics and Interactive Techniques
    Conference Conference Papers ’24</i>. Association for Computing Machinery; 2024.
    doi:<a href="https://doi.org/10.1145/3641519.3657485">10.1145/3641519.3657485</a>'
  apa: 'Chen, Y.-L., Ly, M., &#38; Wojtan, C. (2024). Primal-dual non-smooth friction
    for rigid body animation. In <i>Special Interest Group on Computer Graphics and
    Interactive Techniques Conference Conference Papers ’24</i>. Denver, United States:
    Association for Computing Machinery. <a href="https://doi.org/10.1145/3641519.3657485">https://doi.org/10.1145/3641519.3657485</a>'
  chicago: Chen, Yi-Lu, Mickaël Ly, and Chris Wojtan. “Primal-Dual Non-Smooth Friction
    for Rigid Body Animation.” In <i>Special Interest Group on Computer Graphics and
    Interactive Techniques Conference Conference Papers ’24</i>. Association for Computing
    Machinery, 2024. <a href="https://doi.org/10.1145/3641519.3657485">https://doi.org/10.1145/3641519.3657485</a>.
  ieee: Y.-L. Chen, M. Ly, and C. Wojtan, “Primal-dual non-smooth friction for rigid
    body animation,” in <i>Special Interest Group on Computer Graphics and Interactive
    Techniques Conference Conference Papers ’24</i>, Denver, United States, 2024.
  ista: 'Chen Y-L, Ly M, Wojtan C. 2024. Primal-dual non-smooth friction for rigid
    body animation. Special Interest Group on Computer Graphics and Interactive Techniques
    Conference Conference Papers ’24. SIGGRAPH: Computer Graphics and Interactive
    Techniques Conference.'
  mla: Chen, Yi-Lu, et al. “Primal-Dual Non-Smooth Friction for Rigid Body Animation.”
    <i>Special Interest Group on Computer Graphics and Interactive Techniques Conference
    Conference Papers ’24</i>, Association for Computing Machinery, 2024, doi:<a href="https://doi.org/10.1145/3641519.3657485">10.1145/3641519.3657485</a>.
  short: Y.-L. Chen, M. Ly, C. Wojtan, in:, Special Interest Group on Computer Graphics
    and Interactive Techniques Conference Conference Papers ’24, Association for Computing
    Machinery, 2024.
conference:
  end_date: 2024-08-01
  location: Denver, United States
  name: 'SIGGRAPH: Computer Graphics and Interactive Techniques Conference'
  start_date: 2024-07-28
corr_author: '1'
das_tickbox: '0'
date_created: 2024-07-10T11:06:20Z
date_published: 2024-07-01T00:00:00Z
date_updated: 2026-10-02T11:16:26Z
day: '01'
ddc:
- '621'
- '531'
- '006'
department:
- _id: GradSch
- _id: ChWo
doi: 10.1145/3641519.3657485
external_id:
  isi:
  - '001282218200091'
file:
- access_level: open_access
  checksum: b8b203ed09e3995ba0d7e6a76288663a
  content_type: application/pdf
  creator: yichen
  date_created: 2024-07-10T11:03:14Z
  date_updated: 2024-07-10T11:03:14Z
  file_id: '17215'
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  file_size: 47309472
  relation: main_file
  success: 1
- access_level: open_access
  checksum: 89d81b397b4b6469d828808a68b70820
  content_type: application/pdf
  creator: yichen
  date_created: 2024-07-10T11:03:12Z
  date_updated: 2024-07-10T11:03:12Z
  file_id: '17216'
  file_name: sig24_friction_supplementary.pdf
  file_size: 10518286
  relation: main_file
  success: 1
- access_level: open_access
  checksum: 7123deed34a5456810e7b5336a31c657
  content_type: video/mp4
  creator: yichen
  date_created: 2024-07-10T11:03:51Z
  date_updated: 2024-07-10T11:03:51Z
  file_id: '17217'
  file_name: friction_paper_extra_video_finished.mp4
  file_size: 71789192
  relation: main_file
  success: 1
- access_level: open_access
  checksum: e606fc1ae8f2610ce3b4421566800b45
  content_type: video/mp4
  creator: yichen
  date_created: 2024-07-10T11:03:58Z
  date_updated: 2024-07-10T11:03:58Z
  file_id: '17218'
  file_name: friction_paper_video_finished.mp4
  file_size: 280610763
  relation: main_file
  success: 1
file_date_updated: 2024-07-10T11:03:58Z
fulldoi: https://doi.org/10.1145/3641519.3657485
has_accepted_license: '1'
isi: 1
keyword:
- physical simulation
- frictional contact
- rigid body mechanics
- non-smooth dynamics
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
project:
- _id: 34bc2376-11ca-11ed-8bc3-9a3b3961a088
  grant_number: '101045083'
  name: Computational Discovery of Numerical Algorithms for Animation and Simulation
    of Natural Phenomena
publication: Special Interest Group on Computer Graphics and Interactive Techniques
  Conference Conference Papers '24
publication_identifier:
  isbn:
  - '9798400705250'
publication_status: published
publisher: Association for Computing Machinery
quality_controlled: '1'
researchdata_availability: no
scopus_import: '1'
status: public
supplementarymaterial: yes
title: Primal-dual non-smooth friction for rigid body animation
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
year: '2024'
...
---
OA_place: publisher
OA_type: hybrid
_id: '17219'
abstract:
- lang: eng
  text: 'We introduce a multi-material non-manifold mesh-based surface tracking algorithm
    that converts self-intersections into topological changes. Our algorithm generalizes
    prior work on manifold surface tracking with topological changes: it preserves
    surface features like mesh-based methods, and it robustly handles topological
    changes like level set methods. Our method also offers improved efficiency and
    robustness over the state of the art. We demonstrate the effectiveness of the
    approach on a range of examples, including complex soap film simulations with
    thousands of interacting bubbles, and boolean unions of non-manifold meshes consisting
    of millions of triangles.'
acknowledgement: Peter Heiss-Synak helped conceive the project, helped formulate the
  algorithm structure, contributed ideas and code to Sections 6 & 8, the mesh data
  structure, algorithm robustness and benchmarks, helped write the paper, and provided
  supervision and conceptual solutions throughout the project. Aleksei Kalinov contributed
  ideas and code to Sections 7, 8.5, and 5, the sparse grid data structure, algorithm
  robustness and benchmarks, optimized the performance, produced all results, most
  figures, and the supplementary video, helped write the text, and provided conceptual
  solutions throughout the project. Malina Strugaru helped implement the mesh data
  structure and designed re-meshing operations for non-manifold triangle meshes. Arian
  Etemadi developed early prototypes for ideas in Sections 8.1 and 8.3 and helped
  write the paper. Huidong Yang developed early prototypes for isosurface extraction
  and visualization. Chris Wojtan helped conceive the project, helped write the paper,
  and provided supervision, prototype grid data structure code, and conceptual solutions
  throughout the project. We thank the anonymous reviewers for their helpful comments,
  the members of the Visual Computing Group at ISTA for their feedback, Christopher
  Batty for discussions about LosTopos, and SideFX for the Houdini Education software
  licenses.  This research was funded in part by the European Union (ERC-2021-COG
  101045083 CoDiNA).
article_number: '54'
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Peter
  full_name: Synak, Peter
  id: 331776E2-F248-11E8-B48F-1D18A9856A87
  last_name: Synak
- first_name: Aleksei
  full_name: Kalinov, Aleksei
  id: 44b7120e-eb97-11eb-a6c2-e1557aa81d02
  last_name: Kalinov
  orcid: 0000-0003-2189-3904
- first_name: Irina-Malina
  full_name: Strugaru, Irina-Malina
  id: 2afc607f-f128-11eb-9611-8f2a0dfcf074
  last_name: Strugaru
- first_name: Arian
  full_name: Etemadihaghighi, Arian
  id: 36cea3aa-f38e-11ec-8ae0-c65ae6f6098f
  last_name: Etemadihaghighi
- first_name: Huidong
  full_name: Yang, Huidong
  last_name: Yang
- first_name: Christopher J
  full_name: Wojtan, Christopher J
  id: 3C61F1D2-F248-11E8-B48F-1D18A9856A87
  last_name: Wojtan
  orcid: 0000-0001-6646-5546
citation:
  ama: Synak P, Kalinov A, Strugaru I-M, Etemadi A, Yang H, Wojtan C. Multi-material
    mesh-based surface tracking with implicit topology changes. <i>ACM Transactions
    on Graphics</i>. 2024;43(4). doi:<a href="https://doi.org/10.1145/3658223">10.1145/3658223</a>
  apa: Synak, P., Kalinov, A., Strugaru, I.-M., Etemadi, A., Yang, H., &#38; Wojtan,
    C. (2024). Multi-material mesh-based surface tracking with implicit topology changes.
    <i>ACM Transactions on Graphics</i>. Association for Computing Machinery. <a href="https://doi.org/10.1145/3658223">https://doi.org/10.1145/3658223</a>
  chicago: Synak, Peter, Aleksei Kalinov, Irina-Malina Strugaru, Arian Etemadi, Huidong
    Yang, and Chris Wojtan. “Multi-Material Mesh-Based Surface Tracking with Implicit
    Topology Changes.” <i>ACM Transactions on Graphics</i>. Association for Computing
    Machinery, 2024. <a href="https://doi.org/10.1145/3658223">https://doi.org/10.1145/3658223</a>.
  ieee: P. Synak, A. Kalinov, I.-M. Strugaru, A. Etemadi, H. Yang, and C. Wojtan,
    “Multi-material mesh-based surface tracking with implicit topology changes,” <i>ACM
    Transactions on Graphics</i>, vol. 43, no. 4. Association for Computing Machinery,
    2024.
  ista: Synak P, Kalinov A, Strugaru I-M, Etemadi A, Yang H, Wojtan C. 2024. Multi-material
    mesh-based surface tracking with implicit topology changes. ACM Transactions on
    Graphics. 43(4), 54.
  mla: Synak, Peter, et al. “Multi-Material Mesh-Based Surface Tracking with Implicit
    Topology Changes.” <i>ACM Transactions on Graphics</i>, vol. 43, no. 4, 54, Association
    for Computing Machinery, 2024, doi:<a href="https://doi.org/10.1145/3658223">10.1145/3658223</a>.
  short: P. Synak, A. Kalinov, I.-M. Strugaru, A. Etemadi, H. Yang, C. Wojtan, ACM
    Transactions on Graphics 43 (2024).
corr_author: '1'
das_tickbox: '0'
date_created: 2024-07-10T12:24:00Z
date_published: 2024-07-01T00:00:00Z
date_updated: 2026-10-02T11:19:25Z
day: '01'
ddc:
- '004'
department:
- _id: GradSch
- _id: ChWo
doi: 10.1145/3658223
external_id:
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file_date_updated: 2025-11-11T09:50:52Z
fulldoi: https://doi.org/10.1145/3658223
has_accepted_license: '1'
intvolume: '        43'
isi: 1
issue: '4'
keyword:
- surface tracking
- topology change
- non- manifold meshes
- multi-material flows
- solid modeling
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
project:
- _id: 34bc2376-11ca-11ed-8bc3-9a3b3961a088
  grant_number: '101045083'
  name: Computational Discovery of Numerical Algorithms for Animation and Simulation
    of Natural Phenomena
publication: ACM Transactions on Graphics
publication_identifier:
  eissn:
  - 1557-7368
  issn:
  - 0730-0301
publication_status: published
publisher: Association for Computing Machinery
quality_controlled: '1'
related_material:
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    status: public
  - id: '18301'
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    status: public
researchdata_availability: no
scopus_import: '1'
status: public
supplementarymaterial: no
title: Multi-material mesh-based surface tracking with implicit topology changes
tmp:
  image: /images/cc_by_nc_sa.png
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  short: CC BY-NC-SA (4.0)
type: journal_article
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volume: 43
year: '2024'
...
---
OA_place: publisher
_id: '18301'
abstract:
- lang: eng
  text: Physics simulation in computer graphics can bring triangle meshes into topologically
    invalid states. The method in this thesis contributed to Heiss-Synak* and Kalinov*
    et al. [2024] who devised a non-manifold hybrid surface tracker—a surface tracker
    that repairs explicit non-manifold triangle meshes with the help of the implicit
    domain. Specifically, this thesis provides an algorithm for filling the holes
    that are left after removing problematic parts of the mesh.
alternative_title:
- ISTA Master's Thesis
article_processing_charge: No
author:
- first_name: Arian
  full_name: Etemadihaghighi, Arian
  id: 36cea3aa-f38e-11ec-8ae0-c65ae6f6098f
  last_name: Etemadihaghighi
citation:
  ama: Etemadi A. Filling the holes of non-manifold self-intersecting meshes for implicit
    topology changes in surface tracking. 2024. doi:<a href="https://doi.org/10.15479/at:ista:18301">10.15479/at:ista:18301</a>
  apa: Etemadi, A. (2024). <i>Filling the holes of non-manifold self-intersecting
    meshes for implicit topology changes in surface tracking</i>. Institute of Science
    and Technology Austria. <a href="https://doi.org/10.15479/at:ista:18301">https://doi.org/10.15479/at:ista:18301</a>
  chicago: Etemadi, Arian. “Filling the Holes of Non-Manifold Self-Intersecting Meshes
    for Implicit Topology Changes in Surface Tracking.” Institute of Science and Technology
    Austria, 2024. <a href="https://doi.org/10.15479/at:ista:18301">https://doi.org/10.15479/at:ista:18301</a>.
  ieee: A. Etemadi, “Filling the holes of non-manifold self-intersecting meshes for
    implicit topology changes in surface tracking,” Institute of Science and Technology
    Austria, 2024.
  ista: Etemadi A. 2024. Filling the holes of non-manifold self-intersecting meshes
    for implicit topology changes in surface tracking. Institute of Science and Technology
    Austria.
  mla: Etemadi, Arian. <i>Filling the Holes of Non-Manifold Self-Intersecting Meshes
    for Implicit Topology Changes in Surface Tracking</i>. Institute of Science and
    Technology Austria, 2024, doi:<a href="https://doi.org/10.15479/at:ista:18301">10.15479/at:ista:18301</a>.
  short: A. Etemadi, Filling the Holes of Non-Manifold Self-Intersecting Meshes for
    Implicit Topology Changes in Surface Tracking, Institute of Science and Technology
    Austria, 2024.
corr_author: '1'
das_tickbox: '0'
date_created: 2024-10-11T19:52:20Z
date_published: 2024-10-15T00:00:00Z
date_updated: 2026-10-02T11:19:26Z
day: '15'
ddc:
- '000'
degree_awarded: MS
department:
- _id: GradSch
- _id: ChWo
doi: 10.15479/at:ista:18301
doi_confirm: '1'
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file_date_updated: 2024-10-24T14:34:54Z
fulldoi: https://doi.org/10.15479/at:ista:18301
has_accepted_license: '1'
keyword:
- surface tracking
- non-manifold
- hole-filling
- topology change
- multi-material
- solid-modeling
language:
- iso: eng
month: '10'
oa: 1
oa_version: Published Version
page: '39'
publication_identifier:
  issn:
  - 2791-4585
publication_status: published
publisher: Institute of Science and Technology Austria
related_material:
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  - id: '17219'
    relation: part_of_dissertation
    status: public
researchdata_availability: no
status: public
supervisor:
- first_name: Christopher J
  full_name: Wojtan, Christopher J
  id: 3C61F1D2-F248-11E8-B48F-1D18A9856A87
  last_name: Wojtan
  orcid: 0000-0001-6646-5546
supplementarymaterial: no
title: Filling the holes of non-manifold self-intersecting meshes for implicit topology
  changes in surface tracking
tmp:
  image: /images/cc_by_sa.png
  legal_code_url: https://creativecommons.org/licenses/by-sa/4.0/legalcode
  name: Creative Commons Attribution-ShareAlike 4.0 International Public License (CC
    BY-SA 4.0)
  short: CC BY-SA (4.0)
type: dissertation
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
year: '2024'
...
---
_id: '17471'
abstract:
- lang: eng
  text: Mechanisms for suppressing thermalization in disorder-free many-body systems,
    such as Hilbert space fragmentation and quantum many-body scars, have recently
    attracted much interest in foundations of quantum statistical physics and potential
    quantum information processing applications. However,  their sensitivity to realistic
    effects such as finite temperature remains largely unexplored. Here, we have utilized
    IBM's Kolkata quantum processor to demonstrate an unexpected robustness of quantum
    many-body scars at finite temperatures when the system is prepared in a thermal
    Gibbs ensemble. We identify such robustness in the PXP model, which describes
    quantum many-body scars in experimental systems of Rydberg atom arrays and ultracold
    atoms in tilted Bose--Hubbard optical lattices. By contrast, other theoretical
    models which host exact quantum many-body scars are found to lack such robustness,
    and their scarring properties quickly decay with temperature. Our study sheds
    light on the important differences between scarred models in terms of their algebraic
    structures, which impacts their resilience to finite temperature.
article_processing_charge: No
author:
- first_name: Jean-Yves Marc
  full_name: Desaules, Jean-Yves Marc
  id: 6c292945-a610-11ed-9eec-c3be1ad62a80
  last_name: Desaules
  orcid: 0000-0002-3749-6375
citation:
  ama: Desaules J-YM. Data for “Enhanced many-body quantum scars from the non-Hermitian
    Fock skin effect.” 2024. doi:<a href="https://doi.org/10.15479/AT:ISTA:17471">10.15479/AT:ISTA:17471</a>
  apa: Desaules, J.-Y. M. (2024). Data for “Enhanced many-body quantum scars from
    the non-Hermitian Fock skin effect.” Institute of Science and Technology Austria.
    <a href="https://doi.org/10.15479/AT:ISTA:17471">https://doi.org/10.15479/AT:ISTA:17471</a>
  chicago: Desaules, Jean-Yves Marc. “Data for ‘Enhanced Many-Body Quantum Scars from
    the Non-Hermitian Fock Skin Effect.’” Institute of Science and Technology Austria,
    2024. <a href="https://doi.org/10.15479/AT:ISTA:17471">https://doi.org/10.15479/AT:ISTA:17471</a>.
  ieee: J.-Y. M. Desaules, “Data for ‘Enhanced many-body quantum scars from the non-Hermitian
    Fock skin effect.’” Institute of Science and Technology Austria, 2024.
  ista: Desaules J-YM. 2024. Data for ‘Enhanced many-body quantum scars from the non-Hermitian
    Fock skin effect’, Institute of Science and Technology Austria, <a href="https://doi.org/10.15479/AT:ISTA:17471">10.15479/AT:ISTA:17471</a>.
  mla: Desaules, Jean-Yves Marc. <i>Data for “Enhanced Many-Body Quantum Scars from
    the Non-Hermitian Fock Skin Effect.”</i> Institute of Science and Technology Austria,
    2024, doi:<a href="https://doi.org/10.15479/AT:ISTA:17471">10.15479/AT:ISTA:17471</a>.
  short: J.-Y.M. Desaules, (2024).
contributor:
- contributor_type: researcher
  first_name: Ruizhe
  last_name: Shen
- contributor_type: researcher
  first_name: Fang
  last_name: Qin
- contributor_type: researcher
  first_name: Jean-Yves Marc
  id: 6c292945-a610-11ed-9eec-c3be1ad62a80
  last_name: Desaules
  orcid: 0000-0002-3749-6375
- contributor_type: researcher
  first_name: Zlatko
  last_name: Papić
- contributor_type: researcher
  first_name: Ching Hua
  last_name: Lee
date_created: 2024-08-30T12:59:43Z
date_published: 2024-08-30T00:00:00Z
date_updated: 2026-10-16T12:14:03Z
day: '30'
ddc:
- '530'
department:
- _id: MaSe
doi: 10.15479/AT:ISTA:17471
ec_funded: 1
file:
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  checksum: 2bd49ce5a63f1951c1ed3d89cce4fe27
  content_type: application/zip
  creator: jdesaule
  date_created: 2024-08-30T12:55:37Z
  date_updated: 2024-08-30T12:55:37Z
  file_id: '17472'
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  relation: main_file
  success: 1
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  checksum: c2ba113a241e98c394cc3ca21f3fa126
  content_type: text/plain
  creator: jdesaule
  date_created: 2024-08-30T13:19:57Z
  date_updated: 2024-08-30T13:19:57Z
  file_id: '17473'
  file_name: readme.txt
  file_size: 1368
  relation: main_file
  success: 1
file_date_updated: 2024-08-30T13:19:57Z
fulldoi: https://doi.org/10.15479/AT:ISTA:17471
has_accepted_license: '1'
keyword:
- quantum many-body scars
- non-equilibrium physics
- non-Hermitian physics
month: '08'
oa: 1
oa_version: Published Version
project:
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
  call_identifier: H2020
  grant_number: '101034413'
  name: 'IST-BRIDGE: International postdoctoral program'
publisher: Institute of Science and Technology Austria
related_material:
  record:
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    relation: used_in_publication
    status: public
status: public
title: Data for "Enhanced many-body quantum scars from the non-Hermitian Fock skin
  effect"
tmp:
  image: /images/cc_by_nc.png
  legal_code_url: https://creativecommons.org/licenses/by-nc/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)
  short: CC BY-NC (4.0)
type: research_data
user_id: 68b8ca59-c5b3-11ee-8790-cd641c68093d
year: '2024'
...
---
_id: '9652'
abstract:
- lang: eng
  text: In 1998 Burago and Kleiner and (independently) McMullen gave examples of separated
    nets in Euclidean space which are non-bilipschitz equivalent to the integer lattice.
    We study weaker notions of equivalence of separated nets and demonstrate that
    such notions also give rise to distinct equivalence classes. Put differently,
    we find occurrences of particularly strong divergence of separated nets from the
    integer lattice. Our approach generalises that of Burago and Kleiner and McMullen
    which takes place largely in a continuous setting. Existence of irregular separated
    nets is verified via the existence of non-realisable density functions ρ:[0,1]d→(0,∞).
    In the present work we obtain stronger types of non-realisable densities.
acknowledgement: 'This work was done while both authors were employed at the University
  of Innsbruck and enjoyed the full support of Austrian Science Fund (FWF): P 30902-N35.'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Michael
  full_name: Dymond, Michael
  last_name: Dymond
- first_name: Vojtech
  full_name: Kaluza, Vojtech
  id: 21AE5134-9EAC-11EA-BEA2-D7BD3DDC885E
  last_name: Kaluza
  orcid: 0000-0002-2512-8698
citation:
  ama: Dymond M, Kaluza V. Highly irregular separated nets. <i>Israel Journal of Mathematics</i>.
    2023;253:501-554. doi:<a href="https://doi.org/10.1007/s11856-022-2448-6">10.1007/s11856-022-2448-6</a>
  apa: Dymond, M., &#38; Kaluza, V. (2023). Highly irregular separated nets. <i>Israel
    Journal of Mathematics</i>. Springer Nature. <a href="https://doi.org/10.1007/s11856-022-2448-6">https://doi.org/10.1007/s11856-022-2448-6</a>
  chicago: Dymond, Michael, and Vojtech Kaluza. “Highly Irregular Separated Nets.”
    <i>Israel Journal of Mathematics</i>. Springer Nature, 2023. <a href="https://doi.org/10.1007/s11856-022-2448-6">https://doi.org/10.1007/s11856-022-2448-6</a>.
  ieee: M. Dymond and V. Kaluza, “Highly irregular separated nets,” <i>Israel Journal
    of Mathematics</i>, vol. 253. Springer Nature, pp. 501–554, 2023.
  ista: Dymond M, Kaluza V. 2023. Highly irregular separated nets. Israel Journal
    of Mathematics. 253, 501–554.
  mla: Dymond, Michael, and Vojtech Kaluza. “Highly Irregular Separated Nets.” <i>Israel
    Journal of Mathematics</i>, vol. 253, Springer Nature, 2023, pp. 501–54, doi:<a
    href="https://doi.org/10.1007/s11856-022-2448-6">10.1007/s11856-022-2448-6</a>.
  short: M. Dymond, V. Kaluza, Israel Journal of Mathematics 253 (2023) 501–554.
date_created: 2021-07-14T07:01:28Z
date_published: 2023-03-01T00:00:00Z
date_updated: 2023-08-14T11:26:34Z
day: '01'
ddc:
- '515'
- '516'
department:
- _id: UlWa
doi: 10.1007/s11856-022-2448-6
external_id:
  arxiv:
  - '1903.05923'
  isi:
  - '000904950300003'
file:
- access_level: open_access
  checksum: 6fa0a3207dd1d6467c309fd1bcc867d1
  content_type: application/pdf
  creator: vkaluza
  date_created: 2021-07-14T07:41:50Z
  date_updated: 2021-07-14T07:41:50Z
  file_id: '9653'
  file_name: separated_nets.pdf
  file_size: 900422
  relation: main_file
file_date_updated: 2021-07-14T07:41:50Z
fulldoi: https://doi.org/10.1007/s11856-022-2448-6
has_accepted_license: '1'
intvolume: '       253'
isi: 1
keyword:
- Lipschitz
- bilipschitz
- bounded displacement
- modulus of continuity
- separated net
- non-realisable density
- Burago--Kleiner construction
language:
- iso: eng
month: '03'
oa: 1
oa_version: Submitted Version
page: 501-554
publication: Israel Journal of Mathematics
publication_identifier:
  eissn:
  - 1565-8511
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Highly irregular separated nets
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 253
year: '2023'
...
---
_id: '10005'
abstract:
- lang: eng
  text: We study systems of nonlinear partial differential equations of parabolic
    type, in which the elliptic operator is replaced by the first-order divergence
    operator acting on a flux function, which is related to the spatial gradient of
    the unknown through an additional implicit equation. This setting, broad enough
    in terms of applications, significantly expands the paradigm of nonlinear parabolic
    problems. Formulating four conditions concerning the form of the implicit equation,
    we first show that these conditions describe a maximal monotone p-coercive graph.
    We then establish the global-in-time and large-data existence of a (weak) solution
    and its uniqueness. To this end, we adopt and significantly generalize Minty’s
    method of monotone mappings. A unified theory, containing several novel tools,
    is developed in a way to be tractable from the point of view of numerical approximations.
acknowledgement: "M. Bulíček and J. Málek acknowledge the support of the project No.
  18-12719S financed by the Czech\r\nScience foundation (GAČR). E. Maringová acknowledges
  support from Charles University Research program \r\nUNCE/SCI/023, the grant SVV-2020-260583
  by the Ministry of Education, Youth and Sports, Czech Republic\r\nand from the Austrian
  Science Fund (FWF), grants P30000, W1245, and F65. M. Bulíček and J. Málek are\r\nmembers
  of the Nečas Center for Mathematical Modelling.\r\n"
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Miroslav
  full_name: Bulíček, Miroslav
  last_name: Bulíček
- first_name: Erika
  full_name: Maringová, Erika
  id: dbabca31-66eb-11eb-963a-fb9c22c880b4
  last_name: Maringová
- first_name: Josef
  full_name: Málek, Josef
  last_name: Málek
citation:
  ama: Bulíček M, Maringová E, Málek J. On nonlinear problems of parabolic type with
    implicit constitutive equations involving flux. <i>Mathematical Models and Methods
    in Applied Sciences</i>. 2021;31(09). doi:<a href="https://doi.org/10.1142/S0218202521500457">10.1142/S0218202521500457</a>
  apa: Bulíček, M., Maringová, E., &#38; Málek, J. (2021). On nonlinear problems of
    parabolic type with implicit constitutive equations involving flux. <i>Mathematical
    Models and Methods in Applied Sciences</i>. World Scientific Publishing. <a href="https://doi.org/10.1142/S0218202521500457">https://doi.org/10.1142/S0218202521500457</a>
  chicago: Bulíček, Miroslav, Erika Maringová, and Josef Málek. “On Nonlinear Problems
    of Parabolic Type with Implicit Constitutive Equations Involving Flux.” <i>Mathematical
    Models and Methods in Applied Sciences</i>. World Scientific Publishing, 2021.
    <a href="https://doi.org/10.1142/S0218202521500457">https://doi.org/10.1142/S0218202521500457</a>.
  ieee: M. Bulíček, E. Maringová, and J. Málek, “On nonlinear problems of parabolic
    type with implicit constitutive equations involving flux,” <i>Mathematical Models
    and Methods in Applied Sciences</i>, vol. 31, no. 09. World Scientific Publishing,
    2021.
  ista: Bulíček M, Maringová E, Málek J. 2021. On nonlinear problems of parabolic
    type with implicit constitutive equations involving flux. Mathematical Models
    and Methods in Applied Sciences. 31(09).
  mla: Bulíček, Miroslav, et al. “On Nonlinear Problems of Parabolic Type with Implicit
    Constitutive Equations Involving Flux.” <i>Mathematical Models and Methods in
    Applied Sciences</i>, vol. 31, no. 09, World Scientific Publishing, 2021, doi:<a
    href="https://doi.org/10.1142/S0218202521500457">10.1142/S0218202521500457</a>.
  short: M. Bulíček, E. Maringová, J. Málek, Mathematical Models and Methods in Applied
    Sciences 31 (2021).
date_created: 2021-09-12T22:01:25Z
date_published: 2021-08-25T00:00:00Z
date_updated: 2026-08-18T07:47:39Z
day: '25'
department:
- _id: JuFi
doi: 10.1142/S0218202521500457
external_id:
  arxiv:
  - '2009.06917'
  isi:
  - '000722222900004'
fulldoi: https://doi.org/10.1142/S0218202521500457
intvolume: '        31'
isi: 1
issue: '09'
keyword:
- Nonlinear parabolic systems
- implicit constitutive theory
- weak solutions
- existence
- uniqueness
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2009.06917
month: '08'
oa: 1
oa_version: Preprint
project:
- _id: fc31cba2-9c52-11eb-aca3-ff467d239cd2
  grant_number: F6504
  name: Taming Complexity in Partial Differential Systems
publication: Mathematical Models and Methods in Applied Sciences
publication_identifier:
  eissn:
  - 1793-6314
  issn:
  - 0218-2025
publication_status: published
publisher: World Scientific Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: On nonlinear problems of parabolic type with implicit constitutive equations
  involving flux
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 31
year: '2021'
...
---
OA_place: publisher
_id: '9962'
abstract:
- lang: eng
  text: The brain is one of the largest and most complex organs and it is composed
    of billions of neurons that communicate together enabling e.g. consciousness.
    The cerebral cortex is the largest site of neural integration in the central nervous
    system. Concerted radial migration of newly born cortical projection neurons,
    from their birthplace to their final position, is a key step in the assembly of
    the cerebral cortex. The cellular and molecular mechanisms regulating radial neuronal
    migration in vivo are however still unclear. Recent evidence suggests that distinct
    signaling cues act cell-autonomously but differentially at certain steps during
    the overall migration process. Moreover, functional analysis of genetic mosaics
    (mutant neurons present in wild-type/heterozygote environment) using the MADM
    (Mosaic Analysis with Double Markers) analyses in comparison to global knockout
    also indicate a significant degree of non-cell-autonomous and/or community effects
    in the control of cortical neuron migration. The interactions of cell-intrinsic
    (cell-autonomous) and cell-extrinsic (non-cell-autonomous) components are largely
    unknown. In part of this thesis work we established a MADM-based experimental
    strategy for the quantitative analysis of cell-autonomous gene function versus
    non-cell-autonomous and/or community effects. The direct comparison of mutant
    neurons from the genetic mosaic (cell-autonomous) to mutant neurons in the conditional
    and/or global knockout (cell-autonomous + non-cell-autonomous) allows to quantitatively
    analyze non-cell-autonomous effects. Such analysis enable the high-resolution
    analysis of projection neuron migration dynamics in distinct environments with
    concomitant isolation of genomic and proteomic profiles. Using these experimental
    paradigms and in combination with computational modeling we show and characterize
    the nature of non-cell-autonomous effects to coordinate radial neuron migration.
    Furthermore, this thesis discusses recent developments in neurodevelopment with
    focus on neuronal polarization and non-cell-autonomous mechanisms in neuronal
    migration.
alternative_title:
- ISTA Thesis
article_processing_charge: No
author:
- first_name: Andi H
  full_name: Hansen, Andi H
  id: 38853E16-F248-11E8-B48F-1D18A9856A87
  last_name: Hansen
citation:
  ama: Hansen AH. Cell-autonomous gene function and non-cell-autonomous effects in
    radial projection neuron migration. 2021. doi:<a href="https://doi.org/10.15479/at:ista:9962">10.15479/at:ista:9962</a>
  apa: Hansen, A. H. (2021). <i>Cell-autonomous gene function and non-cell-autonomous
    effects in radial projection neuron migration</i>. Institute of Science and Technology
    Austria. <a href="https://doi.org/10.15479/at:ista:9962">https://doi.org/10.15479/at:ista:9962</a>
  chicago: Hansen, Andi H. “Cell-Autonomous Gene Function and Non-Cell-Autonomous
    Effects in Radial Projection Neuron Migration.” Institute of Science and Technology
    Austria, 2021. <a href="https://doi.org/10.15479/at:ista:9962">https://doi.org/10.15479/at:ista:9962</a>.
  ieee: A. H. Hansen, “Cell-autonomous gene function and non-cell-autonomous effects
    in radial projection neuron migration,” Institute of Science and Technology Austria,
    2021.
  ista: Hansen AH. 2021. Cell-autonomous gene function and non-cell-autonomous effects
    in radial projection neuron migration. Institute of Science and Technology Austria.
  mla: Hansen, Andi H. <i>Cell-Autonomous Gene Function and Non-Cell-Autonomous Effects
    in Radial Projection Neuron Migration</i>. Institute of Science and Technology
    Austria, 2021, doi:<a href="https://doi.org/10.15479/at:ista:9962">10.15479/at:ista:9962</a>.
  short: A.H. Hansen, Cell-Autonomous Gene Function and Non-Cell-Autonomous Effects
    in Radial Projection Neuron Migration, Institute of Science and Technology Austria,
    2021.
corr_author: '1'
date_created: 2021-08-29T12:36:50Z
date_published: 2021-09-02T00:00:00Z
date_updated: 2026-04-08T07:19:09Z
day: '02'
ddc:
- '570'
degree_awarded: PhD
department:
- _id: GradSch
- _id: SiHi
doi: 10.15479/at:ista:9962
file:
- access_level: closed
  checksum: 66b56f5b988b233dc66a4f4b4fb2cdfe
  content_type: application/vnd.openxmlformats-officedocument.wordprocessingml.document
  creator: ahansen
  date_created: 2021-08-30T09:17:39Z
  date_updated: 2022-09-03T22:30:04Z
  embargo_to: open_access
  file_id: '9971'
  file_name: Thesis_Hansen.docx
  file_size: 10629190
  relation: source_file
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  checksum: 204fa40321a1c6289b68c473634c4bf3
  content_type: application/pdf
  creator: ahansen
  date_created: 2021-08-30T09:29:44Z
  date_updated: 2022-09-03T22:30:04Z
  embargo: 2022-09-02
  file_id: '9972'
  file_name: Thesis_Hansen_PDFA-1a.pdf
  file_size: 13457469
  relation: main_file
file_date_updated: 2022-09-03T22:30:04Z
fulldoi: https://doi.org/10.15479/at:ista:9962
has_accepted_license: '1'
keyword:
- Neuronal migration
- Non-cell-autonomous
- Cell-autonomous
- Neurodevelopmental disease
language:
- iso: eng
month: '09'
oa: 1
oa_version: Published Version
page: '182'
project:
- _id: 2625A13E-B435-11E9-9278-68D0E5697425
  grant_number: '24812'
  name: Molecular mechanisms of radial neuronal migration
publication_identifier:
  issn:
  - 2663-337X
publication_status: published
publisher: Institute of Science and Technology Austria
related_material:
  record:
  - id: '8569'
    relation: part_of_dissertation
    status: public
  - id: '960'
    relation: part_of_dissertation
    status: public
status: public
supervisor:
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
title: Cell-autonomous gene function and non-cell-autonomous effects in radial projection
  neuron migration
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: dissertation
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
year: '2021'
...
---
OA_type: closed access
_id: '22510'
abstract:
- lang: eng
  text: This study advances mechanistic interpretation of predictability challenges
    in hydro-geomorphology related to the role of soil moisture spatial variability.
    Using model formulations describing the physics of overland flow, variably saturated
    subsurface flow, and erosion and sediment transport, this study explores (1) why
    a basin with the same mean soil moisture can exhibit distinctly different spatial
    moisture distributions, (2) whether these varying distributions lead to non-unique
    hydro-geomorphic responses, and (3) what controls non-uniqueness in relation to
    the response type. Two sets of numerical experiments are carried out with two
    physically-based models, HYDRUS and tRIBS+VEGGIE+FEaST, and their outputs are
    analyzed with respect to pre-storm moisture state. The results demonstrate that
    distinct spatial moisture distributions for the same mean wetness arise because
    near-surface soil moisture dynamics exhibit different degrees of coupling with
    deeper-soil moisture and the process of subsurface drainage. The consequences
    of such variations are different depending on the type of hydrological response.
    Specifically, if the predominant runoff response is of infiltration excess type,
    the degree of non-uniqueness is related to the spatial distribution of near-surface
    moisture. If runoff is governed by subsurface stormflow, the extent of deep moisture
    contributing area and its “readiness to drain” determine the response characteristics.
    Because the processes of erosion and sediment transport superimpose additional
    controls over factors governing runoff generation and overland flow, non-uniqueness
    of the geomorphic response can be highly dampened or enhanced. The explanation
    is sediment composed by multi-size particles can alternate states of mobilization
    or surface shielding and the transient behavior is inherently intertwined with
    the availability of mobile particles. We conclude that complex nonlinear dynamics
    of hydro-geomorphic processes are inherent expressions of physical interactions.
    As complete knowledge of watershed properties, states, or forcings will always
    present the ultimate, if ever resolvable, challenge, deterministic predictability
    will remain handicapped. Coupling of uncertainty quantification methods and space-time
    physics-based approaches will need to evolve to facilitate mechanistic interpretations
    and informed practical applications.
article_processing_charge: No
article_type: original
author:
- first_name: Jongho
  full_name: Kim, Jongho
  last_name: Kim
- first_name: M. Chase
  full_name: Dwelle, M. Chase
  last_name: Dwelle
- first_name: Stephanie K.
  full_name: Kampf, Stephanie K.
  last_name: Kampf
- first_name: Simone
  full_name: Fatichi, Simone
  id: cf8e546b-a9b0-11f0-a43b-aa89ed1b56d6
  last_name: Fatichi
- first_name: Valeriy Y.
  full_name: Ivanov, Valeriy Y.
  last_name: Ivanov
citation:
  ama: Kim J, Dwelle MC, Kampf SK, Fatichi S, Ivanov VY. On the non-uniqueness of
    the hydro-geomorphic responses in a zero-order catchment with respect to soil
    moisture. <i>Advances in Water Resources</i>. 2016;92:73-89. doi:<a href="https://doi.org/10.1016/j.advwatres.2016.03.019">10.1016/j.advwatres.2016.03.019</a>
  apa: Kim, J., Dwelle, M. C., Kampf, S. K., Fatichi, S., &#38; Ivanov, V. Y. (2016).
    On the non-uniqueness of the hydro-geomorphic responses in a zero-order catchment
    with respect to soil moisture. <i>Advances in Water Resources</i>. Elsevier. <a
    href="https://doi.org/10.1016/j.advwatres.2016.03.019">https://doi.org/10.1016/j.advwatres.2016.03.019</a>
  chicago: Kim, Jongho, M. Chase Dwelle, Stephanie K. Kampf, Simone Fatichi, and Valeriy
    Y. Ivanov. “On the Non-Uniqueness of the Hydro-Geomorphic Responses in a Zero-Order
    Catchment with Respect to Soil Moisture.” <i>Advances in Water Resources</i>.
    Elsevier, 2016. <a href="https://doi.org/10.1016/j.advwatres.2016.03.019">https://doi.org/10.1016/j.advwatres.2016.03.019</a>.
  ieee: J. Kim, M. C. Dwelle, S. K. Kampf, S. Fatichi, and V. Y. Ivanov, “On the non-uniqueness
    of the hydro-geomorphic responses in a zero-order catchment with respect to soil
    moisture,” <i>Advances in Water Resources</i>, vol. 92. Elsevier, pp. 73–89, 2016.
  ista: Kim J, Dwelle MC, Kampf SK, Fatichi S, Ivanov VY. 2016. On the non-uniqueness
    of the hydro-geomorphic responses in a zero-order catchment with respect to soil
    moisture. Advances in Water Resources. 92, 73–89.
  mla: Kim, Jongho, et al. “On the Non-Uniqueness of the Hydro-Geomorphic Responses
    in a Zero-Order Catchment with Respect to Soil Moisture.” <i>Advances in Water
    Resources</i>, vol. 92, Elsevier, 2016, pp. 73–89, doi:<a href="https://doi.org/10.1016/j.advwatres.2016.03.019">10.1016/j.advwatres.2016.03.019</a>.
  short: J. Kim, M.C. Dwelle, S.K. Kampf, S. Fatichi, V.Y. Ivanov, Advances in Water
    Resources 92 (2016) 73–89.
das_tickbox: '1'
date_created: 2026-07-27T12:30:24Z
date_published: 2016-07-01T00:00:00Z
date_updated: 2026-08-06T07:50:36Z
day: '01'
doi: 10.1016/j.advwatres.2016.03.019
extern: '1'
fulldoi: https://doi.org/10.1016/j.advwatres.2016.03.019
intvolume: '        92'
keyword:
- Soil moisture
- Spatial heterogeneity
- Hydrological response
- Geomorphic response
- Non-uniqueness
- Hydraulic connectivity
language:
- iso: eng
month: '07'
oa_version: None
page: 73-89
publication: Advances in Water Resources
publication_identifier:
  issn:
  - 0309-1708
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: On the non-uniqueness of the hydro-geomorphic responses in a zero-order catchment
  with respect to soil moisture
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 92
year: '2016'
...
---
OA_place: repository
OA_type: green
_id: '22053'
abstract:
- lang: eng
  text: We consider the Gross–Pitaevskii equation on R^4 and the cubic-quintic nonlinear
    Schrödinger equation (NLS) on R^3 with non-vanishing boundary conditions at spatial
    infinity. By viewing these equations as perturbations to the energy-critical NLS,
    we prove that they are globally well-posed in their energy spaces. In particular,
    we prove unconditional uniqueness in the energy spaces for these equations.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Rowan
  full_name: Killip, Rowan
  last_name: Killip
- first_name: Tadahiro
  full_name: Oh, Tadahiro
  last_name: Oh
- first_name: Oana
  full_name: Pocovnicu, Oana
  last_name: Pocovnicu
- first_name: Monica
  full_name: Visan, Monica
  id: 056daca0-b8d1-11f0-964f-f91054abf8ca
  last_name: Visan
citation:
  ama: Killip R, Oh T, Pocovnicu O, Vişan M. Global well-posedness of the Gross–Pitaevskii
    and cubic-quintic nonlinear Schrödinger equations with non-vanishing boundary
    conditions. <i>Mathematical Research Letters</i>. 2013;19(5):969-986. doi:<a href="https://doi.org/10.4310/mrl.2012.v19.n5.a1">10.4310/mrl.2012.v19.n5.a1</a>
  apa: Killip, R., Oh, T., Pocovnicu, O., &#38; Vişan, M. (2013). Global well-posedness
    of the Gross–Pitaevskii and cubic-quintic nonlinear Schrödinger equations with
    non-vanishing boundary conditions. <i>Mathematical Research Letters</i>. International
    Press of Boston. <a href="https://doi.org/10.4310/mrl.2012.v19.n5.a1">https://doi.org/10.4310/mrl.2012.v19.n5.a1</a>
  chicago: Killip, Rowan, Tadahiro Oh, Oana Pocovnicu, and Monica Vişan. “Global Well-Posedness
    of the Gross–Pitaevskii and Cubic-Quintic Nonlinear Schrödinger Equations with
    Non-Vanishing Boundary Conditions.” <i>Mathematical Research Letters</i>. International
    Press of Boston, 2013. <a href="https://doi.org/10.4310/mrl.2012.v19.n5.a1">https://doi.org/10.4310/mrl.2012.v19.n5.a1</a>.
  ieee: R. Killip, T. Oh, O. Pocovnicu, and M. Vişan, “Global well-posedness of the
    Gross–Pitaevskii and cubic-quintic nonlinear Schrödinger equations with non-vanishing
    boundary conditions,” <i>Mathematical Research Letters</i>, vol. 19, no. 5. International
    Press of Boston, pp. 969–986, 2013.
  ista: Killip R, Oh T, Pocovnicu O, Vişan M. 2013. Global well-posedness of the Gross–Pitaevskii
    and cubic-quintic nonlinear Schrödinger equations with non-vanishing boundary
    conditions. Mathematical Research Letters. 19(5), 969–986.
  mla: Killip, Rowan, et al. “Global Well-Posedness of the Gross–Pitaevskii and Cubic-Quintic
    Nonlinear Schrödinger Equations with Non-Vanishing Boundary Conditions.” <i>Mathematical
    Research Letters</i>, vol. 19, no. 5, International Press of Boston, 2013, pp.
    969–86, doi:<a href="https://doi.org/10.4310/mrl.2012.v19.n5.a1">10.4310/mrl.2012.v19.n5.a1</a>.
  short: R. Killip, T. Oh, O. Pocovnicu, M. Vişan, Mathematical Research Letters 19
    (2013) 969–986.
das_tickbox: '1'
date_created: 2026-06-19T07:54:49Z
date_published: 2013-03-15T00:00:00Z
date_updated: 2026-06-25T08:33:18Z
day: '15'
doi: 10.4310/mrl.2012.v19.n5.a1
extern: '1'
external_id:
  arxiv:
  - '1112.1354'
fulldoi: https://doi.org/10.4310/mrl.2012.v19.n5.a1
intvolume: '        19'
issue: '5'
keyword:
- NLS
- Gross–Pitaevskii equation
- non-vanishing boundary condition
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.1112.1354
mathsc:
- 35Q55
month: '03'
oa: 1
oa_version: Preprint
page: 969-986
publication: Mathematical Research Letters
publication_identifier:
  eissn:
  - 1945-001X
  issn:
  - 1073-2780
publication_status: published
publisher: International Press of Boston
quality_controlled: '1'
scopus_import: '1'
status: public
title: Global well-posedness of the Gross–Pitaevskii and cubic-quintic nonlinear Schrödinger
  equations with non-vanishing boundary conditions
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 19
year: '2013'
...
