[{"external_id":{"arxiv":["1910.03290"],"isi":["000537425400001"]},"license":"https://creativecommons.org/licenses/by/4.0/","arxiv":1,"publication_identifier":{"eissn":["1361-6404"],"issn":["0143-0807"]},"article_type":"original","file_date_updated":"2020-07-14T12:48:01Z","day":"24","date_updated":"2026-04-02T14:22:29Z","title":"The IYPT and the 'Ring Oiler' problem","author":[{"full_name":"Plesch, Martin","first_name":"Martin","last_name":"Plesch"},{"first_name":"Samuel","last_name":"Plesník","full_name":"Plesník, Samuel"},{"full_name":"Ruzickova, Natalia","id":"D2761128-D73D-11E9-A1BF-BA0DE6697425","last_name":"Ruzickova","first_name":"Natalia"}],"tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"citation":{"chicago":"Plesch, Martin, Samuel Plesník, and Natalia Ruzickova. “The IYPT and the ‘Ring Oiler’ Problem.” <i>European Journal of Physics</i>. IOP Publishing, 2020. <a href=\"https://doi.org/10.1088/1361-6404/ab6414\">https://doi.org/10.1088/1361-6404/ab6414</a>.","short":"M. Plesch, S. Plesník, N. Ruzickova, European Journal of Physics 41 (2020).","mla":"Plesch, Martin, et al. “The IYPT and the ‘Ring Oiler’ Problem.” <i>European Journal of Physics</i>, vol. 41, no. 3, 034001, IOP Publishing, 2020, doi:<a href=\"https://doi.org/10.1088/1361-6404/ab6414\">10.1088/1361-6404/ab6414</a>.","ieee":"M. Plesch, S. Plesník, and N. Ruzickova, “The IYPT and the ‘Ring Oiler’ problem,” <i>European Journal of Physics</i>, vol. 41, no. 3. IOP Publishing, 2020.","ista":"Plesch M, Plesník S, Ruzickova N. 2020. The IYPT and the ‘Ring Oiler’ problem. European Journal of Physics. 41(3), 034001.","apa":"Plesch, M., Plesník, S., &#38; Ruzickova, N. (2020). The IYPT and the “Ring Oiler” problem. <i>European Journal of Physics</i>. IOP Publishing. <a href=\"https://doi.org/10.1088/1361-6404/ab6414\">https://doi.org/10.1088/1361-6404/ab6414</a>","ama":"Plesch M, Plesník S, Ruzickova N. The IYPT and the “Ring Oiler” problem. <i>European Journal of Physics</i>. 2020;41(3). doi:<a href=\"https://doi.org/10.1088/1361-6404/ab6414\">10.1088/1361-6404/ab6414</a>"},"doi":"10.1088/1361-6404/ab6414","volume":41,"scopus_import":"1","department":[{"_id":"FyKo"}],"oa_version":"Published Version","quality_controlled":"1","_id":"7622","oa":1,"isi":1,"type":"journal_article","article_number":"034001","date_published":"2020-02-24T00:00:00Z","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","file":[{"file_id":"7641","date_updated":"2020-07-14T12:48:01Z","date_created":"2020-04-06T08:53:53Z","relation":"main_file","file_name":"2020_EuropJourPhysics_Plesch.pdf","creator":"dernst","checksum":"47dda164e33b6c0c6c3ed14aad298376","file_size":1533672,"access_level":"open_access","content_type":"application/pdf"}],"year":"2020","article_processing_charge":"No","publication_status":"published","intvolume":"        41","language":[{"iso":"eng"}],"publisher":"IOP Publishing","abstract":[{"text":"The International Young Physicists' Tournament (IYPT) continued in 2018 in Beijing, China and 2019 in Warsaw, Poland with its 31st and 32nd editions. The IYPT is a modern scientific competition for teams of high school students, also known as the Physics World Cup. It involves long-term theoretical and experimental work focused on solving 17 publicly announced open-ended problems in teams of five. On top of that, teams have to present their solutions in front of other teams and a scientific jury, and get opposed and reviewed by their peers. Here we present a brief information about the competition with a specific focus on one of the IYPT 2018 tasks, the 'Ring Oiler'. This seemingly simple mechanical problem appeared to be of such a complexity that even the dozens of participating teams and jurying scientists were not able to solve all of its subtleties.","lang":"eng"}],"date_created":"2020-03-31T11:25:04Z","has_accepted_license":"1","ddc":["530"],"publication":"European Journal of Physics","month":"02","status":"public","issue":"3"},{"department":[{"_id":"MiSi"}],"scopus_import":"1","volume":30,"project":[{"grant_number":"LS13-029","name":"Modeling of Polarization and Motility of Leukocytes in Three-Dimensional Environments","_id":"25AD6156-B435-11E9-9278-68D0E5697425"}],"doi":"10.1142/S021820252050013X","citation":{"mla":"Jankowiak, Gaspard, et al. “Modeling Adhesion-Independent Cell Migration.” <i>Mathematical Models and Methods in Applied Sciences</i>, vol. 30, no. 3, World Scientific Publishing, 2020, pp. 513–37, doi:<a href=\"https://doi.org/10.1142/S021820252050013X\">10.1142/S021820252050013X</a>.","ieee":"G. Jankowiak, D. Peurichard, A. Reversat, C. Schmeiser, and M. K. Sixt, “Modeling adhesion-independent cell migration,” <i>Mathematical Models and Methods in Applied Sciences</i>, vol. 30, no. 3. World Scientific Publishing, pp. 513–537, 2020.","ista":"Jankowiak G, Peurichard D, Reversat A, Schmeiser C, Sixt MK. 2020. Modeling adhesion-independent cell migration. Mathematical Models and Methods in Applied Sciences. 30(3), 513–537.","apa":"Jankowiak, G., Peurichard, D., Reversat, A., Schmeiser, C., &#38; Sixt, M. K. (2020). Modeling adhesion-independent cell migration. <i>Mathematical Models and Methods in Applied Sciences</i>. World Scientific Publishing. <a href=\"https://doi.org/10.1142/S021820252050013X\">https://doi.org/10.1142/S021820252050013X</a>","ama":"Jankowiak G, Peurichard D, Reversat A, Schmeiser C, Sixt MK. Modeling adhesion-independent cell migration. <i>Mathematical Models and Methods in Applied Sciences</i>. 2020;30(3):513-537. doi:<a href=\"https://doi.org/10.1142/S021820252050013X\">10.1142/S021820252050013X</a>","chicago":"Jankowiak, Gaspard, Diane Peurichard, Anne Reversat, Christian Schmeiser, and Michael K Sixt. “Modeling Adhesion-Independent Cell Migration.” <i>Mathematical Models and Methods in Applied Sciences</i>. World Scientific Publishing, 2020. <a href=\"https://doi.org/10.1142/S021820252050013X\">https://doi.org/10.1142/S021820252050013X</a>.","short":"G. Jankowiak, D. Peurichard, A. Reversat, C. Schmeiser, M.K. Sixt, Mathematical Models and Methods in Applied Sciences 30 (2020) 513–537."},"_id":"7623","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1903.09426"}],"quality_controlled":"1","oa_version":"Preprint","acknowledgement":"This work has been supported by the Vienna Science and Technology Fund, Grant no. LS13-029. G.J. and C.S. also acknowledge support by the Austrian Science Fund, Grants no. W1245, F 65, and W1261, as well as by the Fondation Sciences Mathématiques de Paris, and by Paris-Sciences-et-Lettres.","article_type":"original","publication_identifier":{"issn":["0218-2025"]},"day":"18","arxiv":1,"external_id":{"isi":["000525349900003"],"arxiv":["1903.09426"]},"author":[{"full_name":"Jankowiak, Gaspard","first_name":"Gaspard","last_name":"Jankowiak"},{"full_name":"Peurichard, Diane","first_name":"Diane","last_name":"Peurichard"},{"first_name":"Anne","last_name":"Reversat","orcid":"0000-0003-0666-8928","full_name":"Reversat, Anne","id":"35B76592-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Schmeiser, Christian","first_name":"Christian","last_name":"Schmeiser"},{"orcid":"0000-0002-6620-9179","last_name":"Sixt","first_name":"Michael K","id":"41E9FBEA-F248-11E8-B48F-1D18A9856A87","full_name":"Sixt, Michael K"}],"date_updated":"2026-04-16T09:35:31Z","title":"Modeling adhesion-independent cell migration","date_created":"2020-03-31T11:25:05Z","abstract":[{"lang":"eng","text":"A two-dimensional mathematical model for cells migrating without adhesion capabilities is presented and analyzed. Cells are represented by their cortex, which is modeled as an elastic curve, subject to an internal pressure force. Net polymerization or depolymerization in the cortex is modeled via local addition or removal of material, driving a cortical flow. The model takes the form of a fully nonlinear degenerate parabolic system. An existence analysis is carried out by adapting ideas from the theory of gradient flows. Numerical simulations show that these simple rules can account for the behavior observed in experiments, suggesting a possible mechanical mechanism for adhesion-independent motility."}],"publisher":"World Scientific Publishing","language":[{"iso":"eng"}],"intvolume":"        30","issue":"3","publication":"Mathematical Models and Methods in Applied Sciences","month":"03","status":"public","page":"513-537","isi":1,"type":"journal_article","oa":1,"article_processing_charge":"No","year":"2020","publication_status":"published","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","date_published":"2020-03-18T00:00:00Z"},{"page":"154","oa":1,"type":"dissertation","ec_funded":1,"file":[{"date_updated":"2020-07-14T12:48:01Z","file_id":"7657","file_size":3297129,"access_level":"open_access","content_type":"application/pdf","date_created":"2020-04-14T10:47:59Z","relation":"main_file","file_name":"Thesis_Forkert_PDFA.pdf","checksum":"c814a1a6195269ca6fe48b0dca45ae8a","creator":"dernst"},{"file_name":"Thesis_Forkert_source.zip","checksum":"ceafb53f923d1b5bdf14b2b0f22e4a81","creator":"dernst","relation":"source_file","date_created":"2020-04-14T10:47:59Z","content_type":"application/x-zip-compressed","access_level":"closed","file_size":1063908,"file_id":"7658","date_updated":"2020-07-14T12:48:01Z"}],"publication_status":"published","year":"2020","article_processing_charge":"No","date_published":"2020-03-31T00:00:00Z","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","publisher":"Institute of Science and Technology Austria","has_accepted_license":"1","abstract":[{"text":"This thesis is based on three main topics: In the first part, we study convergence of discrete gradient flow structures associated with regular finite-volume discretisations of Fokker-Planck equations. We show evolutionary I convergence of the discrete gradient flows to the L2-Wasserstein gradient flow corresponding to the solution of a Fokker-Planck\r\nequation in arbitrary dimension d >= 1. Along the argument, we prove Mosco- and I-convergence results for discrete energy functionals, which are of independent interest for convergence of equivalent gradient flow structures in Hilbert spaces.\r\nThe second part investigates L2-Wasserstein flows on metric graph. The starting point is a Benamou-Brenier formula for the L2-Wasserstein distance, which is proved via a regularisation scheme for solutions of the continuity equation, adapted to the peculiar geometric structure of metric graphs. Based on those results, we show that the L2-Wasserstein space over a metric graph admits a gradient flow which may be identified as a solution of a Fokker-Planck equation.\r\nIn the third part, we focus again on the discrete gradient flows, already encountered in the first part. We propose a variational structure which extends the gradient flow structure to Markov chains violating the detailed-balance conditions. Using this structure, we characterise contraction estimates for the discrete heat flow in terms of convexity of\r\ncorresponding path-dependent energy functionals. In addition, we use this approach to derive several functional inequalities for said functionals.","lang":"eng"}],"date_created":"2020-04-02T06:40:23Z","alternative_title":["ISTA Thesis"],"language":[{"iso":"eng"}],"supervisor":[{"full_name":"Maas, Jan","id":"4C5696CE-F248-11E8-B48F-1D18A9856A87","first_name":"Jan","last_name":"Maas","orcid":"0000-0002-0845-1338"}],"degree_awarded":"PhD","month":"03","ddc":["510"],"status":"public","corr_author":"1","day":"31","file_date_updated":"2020-07-14T12:48:01Z","publication_identifier":{"issn":["2663-337X"]},"OA_place":"publisher","author":[{"id":"35C79D68-F248-11E8-B48F-1D18A9856A87","full_name":"Forkert, Dominik L","last_name":"Forkert","first_name":"Dominik L"}],"title":"Gradient flows in spaces of probability measures for finite-volume schemes, metric graphs and non-reversible Markov chains","date_updated":"2026-04-08T07:22:00Z","department":[{"_id":"JaMa"}],"doi":"10.15479/AT:ISTA:7629","citation":{"ama":"Forkert DL. Gradient flows in spaces of probability measures for finite-volume schemes, metric graphs and non-reversible Markov chains. 2020. doi:<a href=\"https://doi.org/10.15479/AT:ISTA:7629\">10.15479/AT:ISTA:7629</a>","apa":"Forkert, D. L. (2020). <i>Gradient flows in spaces of probability measures for finite-volume schemes, metric graphs and non-reversible Markov chains</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT:ISTA:7629\">https://doi.org/10.15479/AT:ISTA:7629</a>","ista":"Forkert DL. 2020. Gradient flows in spaces of probability measures for finite-volume schemes, metric graphs and non-reversible Markov chains. Institute of Science and Technology Austria.","ieee":"D. L. Forkert, “Gradient flows in spaces of probability measures for finite-volume schemes, metric graphs and non-reversible Markov chains,” Institute of Science and Technology Austria, 2020.","mla":"Forkert, Dominik L. <i>Gradient Flows in Spaces of Probability Measures for Finite-Volume Schemes, Metric Graphs and Non-Reversible Markov Chains</i>. Institute of Science and Technology Austria, 2020, doi:<a href=\"https://doi.org/10.15479/AT:ISTA:7629\">10.15479/AT:ISTA:7629</a>.","short":"D.L. Forkert, Gradient Flows in Spaces of Probability Measures for Finite-Volume Schemes, Metric Graphs and Non-Reversible Markov Chains, Institute of Science and Technology Austria, 2020.","chicago":"Forkert, Dominik L. “Gradient Flows in Spaces of Probability Measures for Finite-Volume Schemes, Metric Graphs and Non-Reversible Markov Chains.” Institute of Science and Technology Austria, 2020. <a href=\"https://doi.org/10.15479/AT:ISTA:7629\">https://doi.org/10.15479/AT:ISTA:7629</a>."},"project":[{"grant_number":"716117","name":"Optimal Transport and Stochastic Dynamics","_id":"256E75B8-B435-11E9-9278-68D0E5697425","call_identifier":"H2020"}],"oa_version":"Published Version","_id":"7629"},{"intvolume":"        10","language":[{"iso":"eng"}],"publisher":"Springer Nature","has_accepted_license":"1","date_created":"2020-04-05T22:00:47Z","abstract":[{"text":"The posterior parietal cortex (PPC) and frontal motor areas comprise a cortical network supporting goal-directed behaviour, with functions including sensorimotor transformations and decision making. In primates, this network links performed and observed actions via mirror neurons, which fire both when individuals perform an action and when they observe the same action performed by a conspecific. Mirror neurons are believed to be important for social learning, but it is not known whether mirror-like neurons occur in similar networks in other social species, such as rodents, or if they can be measured in such models using paradigms where observers passively view a demonstrator. Therefore, we imaged Ca2+ responses in PPC and secondary motor cortex (M2) while mice performed and observed pellet-reaching and wheel-running tasks, and found that cell populations in both areas robustly encoded several naturalistic behaviours. However, neural responses to the same set of observed actions were absent, although we verified that observer mice were attentive to performers and that PPC neurons responded reliably to visual cues. Statistical modelling also indicated that executed actions outperformed observed actions in predicting neural responses. These results raise the possibility that sensorimotor action recognition in rodents could take place outside of the parieto-frontal circuit, and underscore that detecting socially-driven neural coding depends critically on the species and behavioural paradigm used.","lang":"eng"}],"month":"03","ddc":["570"],"status":"public","publication":"Scientific reports","issue":"1","oa":1,"isi":1,"type":"journal_article","article_number":"5559","date_published":"2020-03-27T00:00:00Z","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","file":[{"date_updated":"2020-07-14T12:48:01Z","file_id":"7644","file_size":2621249,"content_type":"application/pdf","access_level":"open_access","relation":"main_file","date_created":"2020-04-06T10:44:23Z","checksum":"e6cfaaaf7986532132934400038b824a","creator":"dernst","file_name":"2020_ScientificReports_Tombaz.pdf"}],"publication_status":"published","article_processing_charge":"No","year":"2020","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"doi":"10.1038/s41598-020-62089-6","citation":{"chicago":"Tombaz, Tuce, Benjamin A. Dunn, Karoline Hovde, Ryan J Cubero, Bartul Mimica, Pranav Mamidanna, Yasser Roudi, and Jonathan R. Whitlock. “Action Representation in the Mouse Parieto-Frontal Network.” <i>Scientific Reports</i>. Springer Nature, 2020. <a href=\"https://doi.org/10.1038/s41598-020-62089-6\">https://doi.org/10.1038/s41598-020-62089-6</a>.","short":"T. Tombaz, B.A. Dunn, K. Hovde, R.J. Cubero, B. Mimica, P. Mamidanna, Y. Roudi, J.R. Whitlock, Scientific Reports 10 (2020).","ieee":"T. Tombaz <i>et al.</i>, “Action representation in the mouse parieto-frontal network,” <i>Scientific reports</i>, vol. 10, no. 1. Springer Nature, 2020.","mla":"Tombaz, Tuce, et al. “Action Representation in the Mouse Parieto-Frontal Network.” <i>Scientific Reports</i>, vol. 10, no. 1, 5559, Springer Nature, 2020, doi:<a href=\"https://doi.org/10.1038/s41598-020-62089-6\">10.1038/s41598-020-62089-6</a>.","apa":"Tombaz, T., Dunn, B. A., Hovde, K., Cubero, R. J., Mimica, B., Mamidanna, P., … Whitlock, J. R. (2020). Action representation in the mouse parieto-frontal network. <i>Scientific Reports</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41598-020-62089-6\">https://doi.org/10.1038/s41598-020-62089-6</a>","ista":"Tombaz T, Dunn BA, Hovde K, Cubero RJ, Mimica B, Mamidanna P, Roudi Y, Whitlock JR. 2020. Action representation in the mouse parieto-frontal network. Scientific reports. 10(1), 5559.","ama":"Tombaz T, Dunn BA, Hovde K, et al. Action representation in the mouse parieto-frontal network. <i>Scientific reports</i>. 2020;10(1). doi:<a href=\"https://doi.org/10.1038/s41598-020-62089-6\">10.1038/s41598-020-62089-6</a>"},"volume":10,"scopus_import":"1","department":[{"_id":"SaSi"}],"quality_controlled":"1","oa_version":"Published Version","_id":"7632","external_id":{"isi":["000560406800007"]},"day":"27","file_date_updated":"2020-07-14T12:48:01Z","publication_identifier":{"eissn":["2045-2322"]},"article_type":"original","title":"Action representation in the mouse parieto-frontal network","date_updated":"2026-04-02T14:23:52Z","author":[{"full_name":"Tombaz, Tuce","last_name":"Tombaz","first_name":"Tuce"},{"full_name":"Dunn, Benjamin A.","first_name":"Benjamin A.","last_name":"Dunn"},{"first_name":"Karoline","last_name":"Hovde","full_name":"Hovde, Karoline"},{"id":"850B2E12-9CD4-11E9-837F-E719E6697425","full_name":"Cubero, Ryan J","orcid":"0000-0003-0002-1867","last_name":"Cubero","first_name":"Ryan J"},{"full_name":"Mimica, Bartul","first_name":"Bartul","last_name":"Mimica"},{"last_name":"Mamidanna","first_name":"Pranav","full_name":"Mamidanna, Pranav"},{"full_name":"Roudi, Yasser","last_name":"Roudi","first_name":"Yasser"},{"last_name":"Whitlock","first_name":"Jonathan R.","full_name":"Whitlock, Jonathan R."}]},{"type":"conference","oa":1,"page":"423-424","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2020-02-19T00:00:00Z","publication_status":"published","article_processing_charge":"No","year":"2020","OA_type":"free access","language":[{"iso":"eng"}],"date_created":"2020-04-05T22:00:48Z","abstract":[{"text":"Concurrent programming can be notoriously complex and error-prone. Programming bugs can arise from a variety of sources, such as operation re-reordering, or incomplete understanding of the memory model. A variety of formal and model checking methods have been developed to address this fundamental difficulty. While technically interesting, existing academic methods are still hard to apply to the large codebases typical of industrial deployments, which limits their practical impact.","lang":"eng"}],"publisher":"Association for Computing Machinery","status":"public","publication":"Proceedings of the ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming","month":"02","ddc":["000"],"conference":{"end_date":"2020-02-26","start_date":"2020-02-22","location":"San Diego, CA, United States","name":"PPOPP: Principles and Practice of Parallel Programming"},"OA_place":"publisher","day":"19","publication_identifier":{"isbn":["9781450368186"]},"title":"Testing concurrency on the JVM with Lincheck","date_updated":"2026-06-18T19:24:47Z","author":[{"last_name":"Koval","first_name":"Nikita","full_name":"Koval, Nikita","id":"2F4DB10C-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Sokolova, Mariia","id":"26217AE4-77FF-11EA-8101-AD24D49E41F4","last_name":"Sokolova","first_name":"Mariia"},{"full_name":"Fedorov, Alexander","last_name":"Fedorov","first_name":"Alexander"},{"orcid":"0000-0003-3650-940X","last_name":"Alistarh","first_name":"Dan-Adrian","id":"4A899BFC-F248-11E8-B48F-1D18A9856A87","full_name":"Alistarh, Dan-Adrian"},{"full_name":"Tsitelov, Dmitry","last_name":"Tsitelov","first_name":"Dmitry"}],"citation":{"short":"N. Koval, M. Sokolova, A. Fedorov, D.-A. Alistarh, D. Tsitelov, in:, Proceedings of the ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming, Association for Computing Machinery, 2020, pp. 423–424.","chicago":"Koval, Nikita, Mariia Sokolova, Alexander Fedorov, Dan-Adrian Alistarh, and Dmitry Tsitelov. “Testing Concurrency on the JVM with Lincheck.” In <i>Proceedings of the ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming</i>, 423–24. Association for Computing Machinery, 2020. <a href=\"https://doi.org/10.1145/3332466.3374503\">https://doi.org/10.1145/3332466.3374503</a>.","ista":"Koval N, Sokolova M, Fedorov A, Alistarh D-A, Tsitelov D. 2020. Testing concurrency on the JVM with Lincheck. Proceedings of the ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming. PPOPP: Principles and Practice of Parallel Programming, 423–424.","ama":"Koval N, Sokolova M, Fedorov A, Alistarh D-A, Tsitelov D. Testing concurrency on the JVM with Lincheck. In: <i>Proceedings of the ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming</i>. Association for Computing Machinery; 2020:423-424. doi:<a href=\"https://doi.org/10.1145/3332466.3374503\">10.1145/3332466.3374503</a>","apa":"Koval, N., Sokolova, M., Fedorov, A., Alistarh, D.-A., &#38; Tsitelov, D. (2020). Testing concurrency on the JVM with Lincheck. In <i>Proceedings of the ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming</i> (pp. 423–424). San Diego, CA, United States: Association for Computing Machinery. <a href=\"https://doi.org/10.1145/3332466.3374503\">https://doi.org/10.1145/3332466.3374503</a>","ieee":"N. Koval, M. Sokolova, A. Fedorov, D.-A. Alistarh, and D. Tsitelov, “Testing concurrency on the JVM with Lincheck,” in <i>Proceedings of the ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming</i>, San Diego, CA, United States, 2020, pp. 423–424.","mla":"Koval, Nikita, et al. “Testing Concurrency on the JVM with Lincheck.” <i>Proceedings of the ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming</i>, Association for Computing Machinery, 2020, pp. 423–24, doi:<a href=\"https://doi.org/10.1145/3332466.3374503\">10.1145/3332466.3374503</a>."},"doi":"10.1145/3332466.3374503","department":[{"_id":"DaAl"}],"scopus_import":"1","_id":"7635","oa_version":"Published Version","quality_controlled":"1","main_file_link":[{"url":"https://doi.org/10.1145/3332466.3374503","open_access":"1"}]},{"arxiv":1,"article_type":"original","publication_identifier":{"eissn":["1361-6544"],"issn":["0951-7715"]},"day":"10","external_id":{"arxiv":["1811.06448"],"isi":["000508175400001"]},"author":[{"id":"2CEB641C-A400-11E9-A717-D712E6697425","full_name":"Cornalba, Federico","first_name":"Federico","orcid":"0000-0002-6269-5149","last_name":"Cornalba"},{"last_name":"Shardlow","first_name":"Tony","full_name":"Shardlow, Tony"},{"full_name":"Zimmer, Johannes","first_name":"Johannes","last_name":"Zimmer"}],"date_updated":"2026-04-02T14:26:08Z","title":"From weakly interacting particles to a regularised Dean-Kawasaki model","volume":33,"department":[{"_id":"JuFi"}],"scopus_import":"1","citation":{"chicago":"Cornalba, Federico, Tony Shardlow, and Johannes Zimmer. “From Weakly Interacting Particles to a Regularised Dean-Kawasaki Model.” <i>Nonlinearity</i>. IOP Publishing, 2020. <a href=\"https://doi.org/10.1088/1361-6544/ab5174\">https://doi.org/10.1088/1361-6544/ab5174</a>.","short":"F. Cornalba, T. Shardlow, J. Zimmer, Nonlinearity 33 (2020) 864–891.","ieee":"F. Cornalba, T. Shardlow, and J. Zimmer, “From weakly interacting particles to a regularised Dean-Kawasaki model,” <i>Nonlinearity</i>, vol. 33, no. 2. IOP Publishing, pp. 864–891, 2020.","mla":"Cornalba, Federico, et al. “From Weakly Interacting Particles to a Regularised Dean-Kawasaki Model.” <i>Nonlinearity</i>, vol. 33, no. 2, IOP Publishing, 2020, pp. 864–91, doi:<a href=\"https://doi.org/10.1088/1361-6544/ab5174\">10.1088/1361-6544/ab5174</a>.","apa":"Cornalba, F., Shardlow, T., &#38; Zimmer, J. (2020). From weakly interacting particles to a regularised Dean-Kawasaki model. <i>Nonlinearity</i>. IOP Publishing. <a href=\"https://doi.org/10.1088/1361-6544/ab5174\">https://doi.org/10.1088/1361-6544/ab5174</a>","ista":"Cornalba F, Shardlow T, Zimmer J. 2020. From weakly interacting particles to a regularised Dean-Kawasaki model. Nonlinearity. 33(2), 864–891.","ama":"Cornalba F, Shardlow T, Zimmer J. From weakly interacting particles to a regularised Dean-Kawasaki model. <i>Nonlinearity</i>. 2020;33(2):864-891. doi:<a href=\"https://doi.org/10.1088/1361-6544/ab5174\">10.1088/1361-6544/ab5174</a>"},"doi":"10.1088/1361-6544/ab5174","main_file_link":[{"url":"https://arxiv.org/abs/1811.06448","open_access":"1"}],"oa_version":"Preprint","quality_controlled":"1","_id":"7637","page":"864-891","oa":1,"isi":1,"type":"journal_article","year":"2020","article_processing_charge":"No","publication_status":"published","date_published":"2020-01-10T00:00:00Z","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","publisher":"IOP Publishing","date_created":"2020-04-05T22:00:49Z","abstract":[{"text":"The evolution of finitely many particles obeying Langevin dynamics is described by Dean–Kawasaki equations, a class of stochastic equations featuring a non-Lipschitz multiplicative noise in divergence form. We derive a regularised Dean–Kawasaki model based on second order Langevin dynamics by analysing a system of particles interacting via a pairwise potential. Key tools of our analysis are the propagation of chaos and Simon's compactness criterion. The model we obtain is a small-noise stochastic perturbation of the undamped McKean–Vlasov equation. We also provide a high-probability result for existence and uniqueness for our model.","lang":"eng"}],"intvolume":"        33","language":[{"iso":"eng"}],"issue":"2","publication":"Nonlinearity","month":"01","status":"public"},{"author":[{"last_name":"De Nicola","orcid":"0000-0002-4842-6671","first_name":"Stefano","full_name":"De Nicola, Stefano","id":"42832B76-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Doyon","first_name":"B.","full_name":"Doyon, B."},{"full_name":"Bhaseen, M. J.","first_name":"M. J.","last_name":"Bhaseen"}],"title":"Non-equilibrium quantum spin dynamics from classical stochastic processes","date_updated":"2026-04-02T14:33:33Z","day":"22","article_type":"original","publication_identifier":{"eissn":["1742-5468"]},"file_date_updated":"2020-07-14T12:48:01Z","arxiv":1,"external_id":{"isi":["000520187500001"],"arxiv":["1909.13142"]},"_id":"7638","oa_version":"Published Version","quality_controlled":"1","department":[{"_id":"MaSe"}],"scopus_import":"1","volume":2020,"project":[{"name":"ISTplus - Postdoctoral Fellowships","grant_number":"754411","call_identifier":"H2020","_id":"260C2330-B435-11E9-9278-68D0E5697425"},{"name":"IST Austria Open Access Fund","_id":"B67AFEDC-15C9-11EA-A837-991A96BB2854"}],"citation":{"chicago":"De Nicola, Stefano, B. Doyon, and M. J. Bhaseen. “Non-Equilibrium Quantum Spin Dynamics from Classical Stochastic Processes.” <i>Journal of Statistical Mechanics: Theory and Experiment</i>. IOP Publishing, 2020. <a href=\"https://doi.org/10.1088/1742-5468/ab6093\">https://doi.org/10.1088/1742-5468/ab6093</a>.","short":"S. De Nicola, B. Doyon, M.J. Bhaseen, Journal of Statistical Mechanics: Theory and Experiment 2020 (2020).","ieee":"S. De Nicola, B. Doyon, and M. J. Bhaseen, “Non-equilibrium quantum spin dynamics from classical stochastic processes,” <i>Journal of Statistical Mechanics: Theory and Experiment</i>, vol. 2020, no. 1. IOP Publishing, 2020.","mla":"De Nicola, Stefano, et al. “Non-Equilibrium Quantum Spin Dynamics from Classical Stochastic Processes.” <i>Journal of Statistical Mechanics: Theory and Experiment</i>, vol. 2020, no. 1, 013106, IOP Publishing, 2020, doi:<a href=\"https://doi.org/10.1088/1742-5468/ab6093\">10.1088/1742-5468/ab6093</a>.","apa":"De Nicola, S., Doyon, B., &#38; Bhaseen, M. J. (2020). Non-equilibrium quantum spin dynamics from classical stochastic processes. <i>Journal of Statistical Mechanics: Theory and Experiment</i>. IOP Publishing. <a href=\"https://doi.org/10.1088/1742-5468/ab6093\">https://doi.org/10.1088/1742-5468/ab6093</a>","ama":"De Nicola S, Doyon B, Bhaseen MJ. Non-equilibrium quantum spin dynamics from classical stochastic processes. <i>Journal of Statistical Mechanics: Theory and Experiment</i>. 2020;2020(1). doi:<a href=\"https://doi.org/10.1088/1742-5468/ab6093\">10.1088/1742-5468/ab6093</a>","ista":"De Nicola S, Doyon B, Bhaseen MJ. 2020. Non-equilibrium quantum spin dynamics from classical stochastic processes. Journal of Statistical Mechanics: Theory and Experiment. 2020(1), 013106."},"doi":"10.1088/1742-5468/ab6093","publication_status":"published","article_processing_charge":"No","year":"2020","file":[{"file_id":"7648","date_updated":"2020-07-14T12:48:01Z","date_created":"2020-04-06T13:15:49Z","relation":"main_file","checksum":"4030e683c15d30b7b4794ec7dc1b6537","file_name":"2020_JournStatisticalMech_DeNicola.pdf","creator":"dernst","file_size":3159026,"access_level":"open_access","content_type":"application/pdf"}],"user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","article_number":"013106","date_published":"2020-01-22T00:00:00Z","ec_funded":1,"type":"journal_article","isi":1,"oa":1,"issue":"1","ddc":["530"],"corr_author":"1","month":"01","publication":"Journal of Statistical Mechanics: Theory and Experiment","status":"public","has_accepted_license":"1","date_created":"2020-04-05T22:00:50Z","abstract":[{"text":"Following on from our recent work, we investigate a stochastic approach to non-equilibrium quantum spin systems. We show how the method can be applied to a variety of physical observables and for different initial conditions. We provide exact formulae of broad applicability for the time-dependence of expectation values and correlation functions following a quantum quench in terms of averages over classical stochastic processes. We further explore the behavior of the classical stochastic variables in the presence of dynamical quantum phase transitions, including results for their distributions and correlation functions. We provide details on the numerical solution of the associated stochastic differential equations, and examine the growth of fluctuations in the classical description. We discuss the strengths and limitations of the current implementation of the stochastic approach and the potential for further development.","lang":"eng"}],"publisher":"IOP Publishing","language":[{"iso":"eng"}],"intvolume":"      2020"},{"file_date_updated":"2020-10-06T07:41:35Z","article_type":"original","publication_identifier":{"eissn":["1460-2431"],"issn":["0022-0957"]},"day":"06","external_id":{"isi":["000553125400007"],"pmid":["32179893"]},"author":[{"full_name":"Lee, E","first_name":"E","last_name":"Lee"},{"last_name":"Vila Nova Santana","first_name":"B","full_name":"Vila Nova Santana, B"},{"first_name":"E","last_name":"Samuels","full_name":"Samuels, E"},{"first_name":"F","last_name":"Benitez-Fuente","full_name":"Benitez-Fuente, F"},{"full_name":"Corsi, E","first_name":"E","last_name":"Corsi"},{"first_name":"MA","last_name":"Botella","full_name":"Botella, MA"},{"full_name":"Perez-Sancho, J","first_name":"J","last_name":"Perez-Sancho"},{"full_name":"Vanneste, S","last_name":"Vanneste","first_name":"S"},{"orcid":"0000-0002-8302-7596","last_name":"Friml","first_name":"Jiří","id":"4159519E-F248-11E8-B48F-1D18A9856A87","full_name":"Friml, Jiří"},{"full_name":"Macho, A","first_name":"A","last_name":"Macho"},{"full_name":"Alves Azevedo, A","first_name":"A","last_name":"Alves Azevedo"},{"last_name":"Rosado","first_name":"A","full_name":"Rosado, A"}],"date_updated":"2024-10-21T06:02:26Z","title":"Rare earth elements induce cytoskeleton-dependent and PI4P-associated rearrangement of SYT1/SYT5 ER-PM contact site complexes in Arabidopsis","scopus_import":"1","department":[{"_id":"JiFr"}],"volume":71,"doi":"10.1093/jxb/eraa138","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"citation":{"chicago":"Lee, E, B Vila Nova Santana, E Samuels, F Benitez-Fuente, E Corsi, MA Botella, J Perez-Sancho, et al. “Rare Earth Elements Induce Cytoskeleton-Dependent and PI4P-Associated Rearrangement of SYT1/SYT5 ER-PM Contact Site Complexes in Arabidopsis.” <i>Journal of Experimental Botany</i>. Oxford University Press, 2020. <a href=\"https://doi.org/10.1093/jxb/eraa138\">https://doi.org/10.1093/jxb/eraa138</a>.","short":"E. Lee, B. Vila Nova Santana, E. Samuels, F. Benitez-Fuente, E. Corsi, M. Botella, J. Perez-Sancho, S. Vanneste, J. Friml, A. Macho, A. Alves Azevedo, A. Rosado, Journal of Experimental Botany 71 (2020) 3986–3998.","ieee":"E. Lee <i>et al.</i>, “Rare earth elements induce cytoskeleton-dependent and PI4P-associated rearrangement of SYT1/SYT5 ER-PM contact site complexes in Arabidopsis,” <i>Journal of Experimental Botany</i>, vol. 71, no. 14. Oxford University Press, pp. 3986–3998, 2020.","mla":"Lee, E., et al. “Rare Earth Elements Induce Cytoskeleton-Dependent and PI4P-Associated Rearrangement of SYT1/SYT5 ER-PM Contact Site Complexes in Arabidopsis.” <i>Journal of Experimental Botany</i>, vol. 71, no. 14, Oxford University Press, 2020, pp. 3986–3998, doi:<a href=\"https://doi.org/10.1093/jxb/eraa138\">10.1093/jxb/eraa138</a>.","ama":"Lee E, Vila Nova Santana B, Samuels E, et al. Rare earth elements induce cytoskeleton-dependent and PI4P-associated rearrangement of SYT1/SYT5 ER-PM contact site complexes in Arabidopsis. <i>Journal of Experimental Botany</i>. 2020;71(14):3986–3998. doi:<a href=\"https://doi.org/10.1093/jxb/eraa138\">10.1093/jxb/eraa138</a>","apa":"Lee, E., Vila Nova Santana, B., Samuels, E., Benitez-Fuente, F., Corsi, E., Botella, M., … Rosado, A. (2020). Rare earth elements induce cytoskeleton-dependent and PI4P-associated rearrangement of SYT1/SYT5 ER-PM contact site complexes in Arabidopsis. <i>Journal of Experimental Botany</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/jxb/eraa138\">https://doi.org/10.1093/jxb/eraa138</a>","ista":"Lee E, Vila Nova Santana B, Samuels E, Benitez-Fuente F, Corsi E, Botella M, Perez-Sancho J, Vanneste S, Friml J, Macho A, Alves Azevedo A, Rosado A. 2020. Rare earth elements induce cytoskeleton-dependent and PI4P-associated rearrangement of SYT1/SYT5 ER-PM contact site complexes in Arabidopsis. Journal of Experimental Botany. 71(14), 3986–3998."},"_id":"7646","oa_version":"Published Version","quality_controlled":"1","page":"3986–3998","type":"journal_article","isi":1,"oa":1,"article_processing_charge":"No","year":"2020","publication_status":"published","file":[{"date_created":"2020-10-06T07:41:35Z","relation":"main_file","checksum":"b06aaaa93dc41896da805fe4b75cf3a1","creator":"dernst","file_name":"2020_JourExperimBotany_Lee.pdf","file_size":1916031,"access_level":"open_access","content_type":"application/pdf","success":1,"file_id":"8613","date_updated":"2020-10-06T07:41:35Z"}],"user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","date_published":"2020-07-06T00:00:00Z","abstract":[{"text":"In plant cells, environmental stressors promote changes in connectivity between the cortical ER and the PM. Although this process is tightly regulated in space and time, the molecular signals and structural components mediating these changes in inter-organelle communication are only starting to be characterized. In this report, we confirm the presence of a putative tethering complex containing the synaptotagmins 1 and 5 (SYT1 and SYT5) and the Ca2+ and lipid binding protein 1 (CLB1/SYT7). This complex is enriched at ER-PM contact sites (EPCS), have slow responses to changes in extracellular Ca2+, and display severe cytoskeleton-dependent rearrangements in response to the trivalent lanthanum (La3+) and gadolinium (Gd3+) rare earth elements (REEs). Although REEs are generally used as non-selective cation channel blockers at the PM, here we show that the slow internalization of REEs into the cytosol underlies the activation of the Ca2+/Calmodulin intracellular signaling, the accumulation of phosphatidylinositol-4-phosphate (PI4P) at the PM, and the cytoskeleton-dependent rearrangement of the SYT1/SYT5 EPCS complexes. We propose that the observed EPCS rearrangements act as a slow adaptive response to sustained stress conditions, and that this process involves the accumulation of stress-specific phosphoinositides species at the PM.","lang":"eng"}],"date_created":"2020-04-06T10:57:08Z","pmid":1,"has_accepted_license":"1","publisher":"Oxford University Press","language":[{"iso":"eng"}],"intvolume":"        71","issue":"14","publication":"Journal of Experimental Botany","month":"07","status":"public","ddc":["580"]},{"_id":"7650","oa_version":"Published Version","quality_controlled":"1","project":[{"name":"Analysis of quantum many-body systems","grant_number":"694227","call_identifier":"H2020","_id":"25C6DC12-B435-11E9-9278-68D0E5697425"},{"name":"IST Austria Open Access Fund","_id":"B67AFEDC-15C9-11EA-A837-991A96BB2854"}],"doi":"10.1007/s00205-020-01489-4","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"citation":{"mla":"Deuchert, Andreas, and Robert Seiringer. “Gross-Pitaevskii Limit of a Homogeneous Bose Gas at Positive Temperature.” <i>Archive for Rational Mechanics and Analysis</i>, vol. 236, no. 6, Springer Nature, 2020, pp. 1217–71, doi:<a href=\"https://doi.org/10.1007/s00205-020-01489-4\">10.1007/s00205-020-01489-4</a>.","ieee":"A. Deuchert and R. Seiringer, “Gross-Pitaevskii limit of a homogeneous Bose gas at positive temperature,” <i>Archive for Rational Mechanics and Analysis</i>, vol. 236, no. 6. Springer Nature, pp. 1217–1271, 2020.","ama":"Deuchert A, Seiringer R. Gross-Pitaevskii limit of a homogeneous Bose gas at positive temperature. <i>Archive for Rational Mechanics and Analysis</i>. 2020;236(6):1217-1271. doi:<a href=\"https://doi.org/10.1007/s00205-020-01489-4\">10.1007/s00205-020-01489-4</a>","apa":"Deuchert, A., &#38; Seiringer, R. (2020). Gross-Pitaevskii limit of a homogeneous Bose gas at positive temperature. <i>Archive for Rational Mechanics and Analysis</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00205-020-01489-4\">https://doi.org/10.1007/s00205-020-01489-4</a>","ista":"Deuchert A, Seiringer R. 2020. Gross-Pitaevskii limit of a homogeneous Bose gas at positive temperature. Archive for Rational Mechanics and Analysis. 236(6), 1217–1271.","chicago":"Deuchert, Andreas, and Robert Seiringer. “Gross-Pitaevskii Limit of a Homogeneous Bose Gas at Positive Temperature.” <i>Archive for Rational Mechanics and Analysis</i>. Springer Nature, 2020. <a href=\"https://doi.org/10.1007/s00205-020-01489-4\">https://doi.org/10.1007/s00205-020-01489-4</a>.","short":"A. Deuchert, R. Seiringer, Archive for Rational Mechanics and Analysis 236 (2020) 1217–1271."},"scopus_import":"1","department":[{"_id":"RoSe"}],"volume":236,"date_updated":"2025-04-14T07:27:00Z","title":"Gross-Pitaevskii limit of a homogeneous Bose gas at positive temperature","author":[{"orcid":"0000-0003-3146-6746","last_name":"Deuchert","first_name":"Andreas","id":"4DA65CD0-F248-11E8-B48F-1D18A9856A87","full_name":"Deuchert, Andreas"},{"full_name":"Seiringer, Robert","id":"4AFD0470-F248-11E8-B48F-1D18A9856A87","first_name":"Robert","last_name":"Seiringer","orcid":"0000-0002-6781-0521"}],"external_id":{"isi":["000519415000001"],"arxiv":["1901.11363"]},"acknowledgement":"Open access funding provided by Institute of Science and Technology (IST Austria). It is a pleasure to thank Jakob Yngvason for helpful discussions. Financial support by the European Research Council (ERC) under the European Union’sHorizon 2020 research and innovation programme (Grant Agreement No. 694227) is gratefully acknowledged. A. D. acknowledges funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie Grant Agreement No. 836146.","publication_identifier":{"eissn":["1432-0673"],"issn":["0003-9527"]},"article_type":"original","file_date_updated":"2020-11-20T13:17:42Z","day":"09","arxiv":1,"ddc":["510"],"status":"public","month":"03","corr_author":"1","publication":"Archive for Rational Mechanics and Analysis","issue":"6","language":[{"iso":"eng"}],"intvolume":"       236","abstract":[{"text":"We consider a dilute, homogeneous Bose gas at positive temperature. The system is investigated in the Gross–Pitaevskii limit, where the scattering length a is so small that the interaction energy is of the same order of magnitude as the spectral gap of the Laplacian, and for temperatures that are comparable to the critical temperature of the ideal gas. We show that the difference between the specific free energy of the interacting system and the one of the ideal gas is to leading order given by 4πa(2ϱ2−ϱ20). Here ϱ denotes the density of the system and ϱ0 is the expected condensate density of the ideal gas. Additionally, we show that the one-particle density matrix of any approximate minimizer of the Gibbs free energy functional is to leading order given by the one of the ideal gas. This in particular proves Bose–Einstein condensation with critical temperature given by the one of the ideal gas to leading order. One key ingredient of our proof is a novel use of the Gibbs variational principle that goes hand in hand with the c-number substitution.","lang":"eng"}],"has_accepted_license":"1","date_created":"2020-04-08T15:18:03Z","publisher":"Springer Nature","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","date_published":"2020-03-09T00:00:00Z","year":"2020","article_processing_charge":"Yes (via OA deal)","publication_status":"published","file":[{"date_updated":"2020-11-20T13:17:42Z","success":1,"file_id":"8785","file_size":704633,"access_level":"open_access","content_type":"application/pdf","date_created":"2020-11-20T13:17:42Z","relation":"main_file","creator":"dernst","file_name":"2020_ArchRatMechanicsAnalysis_Deuchert.pdf","checksum":"b645fb64bfe95bbc05b3eea374109a9c"}],"isi":1,"ec_funded":1,"type":"journal_article","oa":1,"page":"1217-1271"},{"volume":14,"scopus_import":"1","department":[{"_id":"GaTk"}],"doi":"10.3389/fncom.2020.00020","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"citation":{"ieee":"M. J. Berry and G. Tkačik, “Clustering of neural activity: A design principle for population codes,” <i>Frontiers in Computational Neuroscience</i>, vol. 14. Frontiers, 2020.","mla":"Berry, Michael J., and Gašper Tkačik. “Clustering of Neural Activity: A Design Principle for Population Codes.” <i>Frontiers in Computational Neuroscience</i>, vol. 14, 20, Frontiers, 2020, doi:<a href=\"https://doi.org/10.3389/fncom.2020.00020\">10.3389/fncom.2020.00020</a>.","ama":"Berry MJ, Tkačik G. Clustering of neural activity: A design principle for population codes. <i>Frontiers in Computational Neuroscience</i>. 2020;14. doi:<a href=\"https://doi.org/10.3389/fncom.2020.00020\">10.3389/fncom.2020.00020</a>","ista":"Berry MJ, Tkačik G. 2020. Clustering of neural activity: A design principle for population codes. Frontiers in Computational Neuroscience. 14, 20.","apa":"Berry, M. J., &#38; Tkačik, G. (2020). Clustering of neural activity: A design principle for population codes. <i>Frontiers in Computational Neuroscience</i>. Frontiers. <a href=\"https://doi.org/10.3389/fncom.2020.00020\">https://doi.org/10.3389/fncom.2020.00020</a>","chicago":"Berry, Michael J., and Gašper Tkačik. “Clustering of Neural Activity: A Design Principle for Population Codes.” <i>Frontiers in Computational Neuroscience</i>. Frontiers, 2020. <a href=\"https://doi.org/10.3389/fncom.2020.00020\">https://doi.org/10.3389/fncom.2020.00020</a>.","short":"M.J. Berry, G. Tkačik, Frontiers in Computational Neuroscience 14 (2020)."},"oa_version":"Published Version","quality_controlled":"1","_id":"7656","day":"13","file_date_updated":"2020-07-14T12:48:01Z","publication_identifier":{"eissn":["1662-5188"]},"article_type":"original","external_id":{"pmid":["32231528"],"isi":["000525543200001"]},"author":[{"first_name":"Michael J.","last_name":"Berry","full_name":"Berry, Michael J."},{"orcid":"0000-0002-6699-1455","last_name":"Tkačik","first_name":"Gašper","id":"3D494DCA-F248-11E8-B48F-1D18A9856A87","full_name":"Tkačik, Gašper"}],"title":"Clustering of neural activity: A design principle for population codes","date_updated":"2026-04-16T08:28:50Z","publisher":"Frontiers","has_accepted_license":"1","abstract":[{"text":"We propose that correlations among neurons are generically strong enough to organize neural activity patterns into a discrete set of clusters, which can each be viewed as a population codeword. Our reasoning starts with the analysis of retinal ganglion cell data using maximum entropy models, showing that the population is robustly in a frustrated, marginally sub-critical, or glassy, state. This leads to an argument that neural populations in many other brain areas might share this structure. Next, we use latent variable models to show that this glassy state possesses well-defined clusters of neural activity. Clusters have three appealing properties: (i) clusters exhibit error correction, i.e., they are reproducibly elicited by the same stimulus despite variability at the level of constituent neurons; (ii) clusters encode qualitatively different visual features than their constituent neurons; and (iii) clusters can be learned by downstream neural circuits in an unsupervised fashion. We hypothesize that these properties give rise to a “learnable” neural code which the cortical hierarchy uses to extract increasingly complex features without supervision or reinforcement.","lang":"eng"}],"date_created":"2020-04-12T22:00:40Z","pmid":1,"intvolume":"        14","language":[{"iso":"eng"}],"publication":"Frontiers in Computational Neuroscience","ddc":["570"],"status":"public","month":"03","oa":1,"isi":1,"type":"journal_article","file":[{"relation":"main_file","date_created":"2020-04-14T12:20:39Z","file_name":"2020_Frontiers_Berry.pdf","creator":"dernst","checksum":"2b1da23823eae9cedbb42d701945b61e","file_size":4082937,"content_type":"application/pdf","access_level":"open_access","file_id":"7659","date_updated":"2020-07-14T12:48:01Z"}],"publication_status":"published","year":"2020","article_processing_charge":"No","date_published":"2020-03-13T00:00:00Z","article_number":"20","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd"},{"publisher":"American Chemical Society","pmid":1,"date_created":"2020-04-19T22:00:54Z","has_accepted_license":"1","abstract":[{"lang":"eng","text":"Wood, as the most abundant carbon dioxide storing bioresource, is currently driven beyond its traditional use through creative innovations and nanotechnology. For many properties the micro- and nanostructure plays a crucial role and one key challenge is control and detection of chemical and physical processes in the confined microstructure and nanopores of the wooden cell wall. In this study, correlative Raman and atomic force microscopy show high potential for tracking in situ molecular rearrangement of wood polymers during compression. More water molecules (interpreted as wider cellulose microfibril distances) and disentangling of hemicellulose chains are detected in the opened cell wall regions, whereas an increase of lignin is revealed in the compressed areas. These results support a new more “loose” cell wall model based on flexible lignin nanodomains and advance our knowledge of the molecular reorganization during deformation of wood for optimized processing and utilization."}],"intvolume":"        20","language":[{"iso":"eng"}],"issue":"4","ddc":["530"],"publication":"Nano Letters","month":"04","status":"public","page":"2647-2653","oa":1,"type":"journal_article","isi":1,"file":[{"relation":"main_file","date_created":"2020-04-20T10:43:36Z","checksum":"fe46146a9c4c620592a1932a8599069e","file_name":"2020_NanoLetters_Felhofer.pdf","creator":"dernst","file_size":7108014,"content_type":"application/pdf","access_level":"open_access","file_id":"7667","date_updated":"2020-07-14T12:48:01Z"}],"year":"2020","article_processing_charge":"No","publication_status":"published","date_published":"2020-04-08T00:00:00Z","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","volume":20,"department":[{"_id":"MaLo"}],"scopus_import":"1","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"doi":"10.1021/acs.nanolett.0c00205","citation":{"chicago":"Felhofer, Martin, Peter Bock, Adya Singh, Batirtze Prats Mateu, Ronald Zirbs, and Notburga Gierlinger. “Wood Deformation Leads to Rearrangement of Molecules at the Nanoscale.” <i>Nano Letters</i>. American Chemical Society, 2020. <a href=\"https://doi.org/10.1021/acs.nanolett.0c00205\">https://doi.org/10.1021/acs.nanolett.0c00205</a>.","short":"M. Felhofer, P. Bock, A. Singh, B. Prats Mateu, R. Zirbs, N. Gierlinger, Nano Letters 20 (2020) 2647–2653.","mla":"Felhofer, Martin, et al. “Wood Deformation Leads to Rearrangement of Molecules at the Nanoscale.” <i>Nano Letters</i>, vol. 20, no. 4, American Chemical Society, 2020, pp. 2647–53, doi:<a href=\"https://doi.org/10.1021/acs.nanolett.0c00205\">10.1021/acs.nanolett.0c00205</a>.","ieee":"M. Felhofer, P. Bock, A. Singh, B. Prats Mateu, R. Zirbs, and N. Gierlinger, “Wood deformation leads to rearrangement of molecules at the nanoscale,” <i>Nano Letters</i>, vol. 20, no. 4. American Chemical Society, pp. 2647–2653, 2020.","apa":"Felhofer, M., Bock, P., Singh, A., Prats Mateu, B., Zirbs, R., &#38; Gierlinger, N. (2020). Wood deformation leads to rearrangement of molecules at the nanoscale. <i>Nano Letters</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acs.nanolett.0c00205\">https://doi.org/10.1021/acs.nanolett.0c00205</a>","ista":"Felhofer M, Bock P, Singh A, Prats Mateu B, Zirbs R, Gierlinger N. 2020. Wood deformation leads to rearrangement of molecules at the nanoscale. Nano Letters. 20(4), 2647–2653.","ama":"Felhofer M, Bock P, Singh A, Prats Mateu B, Zirbs R, Gierlinger N. Wood deformation leads to rearrangement of molecules at the nanoscale. <i>Nano Letters</i>. 2020;20(4):2647-2653. doi:<a href=\"https://doi.org/10.1021/acs.nanolett.0c00205\">10.1021/acs.nanolett.0c00205</a>"},"quality_controlled":"1","oa_version":"Published Version","_id":"7663","article_type":"original","publication_identifier":{"eissn":["1530-6992"]},"file_date_updated":"2020-07-14T12:48:01Z","day":"08","external_id":{"pmid":["32196350"],"isi":["000526413400055"]},"author":[{"last_name":"Felhofer","first_name":"Martin","full_name":"Felhofer, Martin"},{"last_name":"Bock","first_name":"Peter","full_name":"Bock, Peter"},{"first_name":"Adya","last_name":"Singh","full_name":"Singh, Adya"},{"full_name":"Prats Mateu, Batirtze","id":"299FE892-F248-11E8-B48F-1D18A9856A87","last_name":"Prats Mateu","first_name":"Batirtze"},{"last_name":"Zirbs","first_name":"Ronald","full_name":"Zirbs, Ronald"},{"last_name":"Gierlinger","first_name":"Notburga","full_name":"Gierlinger, Notburga"}],"date_updated":"2026-04-02T14:26:44Z","title":"Wood deformation leads to rearrangement of molecules at the nanoscale"},{"issue":"7","publication":"International journal of molecular sciences","month":"04","status":"public","ddc":["570"],"publisher":"MDPI","has_accepted_license":"1","pmid":1,"date_created":"2020-04-19T22:00:55Z","abstract":[{"text":"Metabotropic γ-aminobutyric acid (GABAB) receptors contribute to the control of network activity and information processing in hippocampal circuits by regulating neuronal excitability and synaptic transmission. The dysfunction in the dentate gyrus (DG) has been implicated in Alzheimer´s disease (AD). Given the involvement of GABAB receptors in AD, to determine their subcellular localisation and possible alteration in granule cells of the DG in a mouse model of AD at 12 months of age, we used high-resolution immunoelectron microscopic analysis. Immunohistochemistry at the light microscopic level showed that the regional and cellular expression pattern of GABAB1 was similar in an AD model mouse expressing mutated human amyloid precursor protein and presenilin1 (APP/PS1) and in age-matched wild type mice. High-resolution immunoelectron microscopy revealed a distance-dependent gradient of immunolabelling for GABAB receptors, increasing from proximal to distal dendrites in both wild type and APP/PS1 mice. However, the overall density of GABAB receptors at the neuronal surface of these postsynaptic compartments of granule cells was significantly reduced in APP/PS1 mice. Parallel to this reduction in surface receptors, we found a significant increase in GABAB1 at cytoplasmic sites. GABAB receptors were also detected at presynaptic sites in the molecular layer of the DG. We also found a decrease in plasma membrane GABAB receptors in axon terminals contacting dendritic spines of granule cells, which was more pronounced in the outer than in the inner molecular layer. Altogether, our data showing post- and presynaptic reduction in surface GABAB receptors in the DG suggest the alteration of the GABAB-mediated modulation of excitability and synaptic transmission in granule cells, which may contribute to the cognitive dysfunctions in the APP/PS1 model of AD","lang":"eng"}],"intvolume":"        21","language":[{"iso":"eng"}],"file":[{"date_updated":"2020-07-14T12:48:01Z","file_id":"7669","content_type":"application/pdf","access_level":"open_access","file_size":2941197,"file_name":"2020_JournMolecSciences_Martin_Belmonte.pdf","checksum":"b9d2f1657d8c4a74b01a62b474d009b0","creator":"dernst","relation":"main_file","date_created":"2020-04-20T11:43:18Z"}],"year":"2020","article_processing_charge":"No","publication_status":"published","date_published":"2020-04-02T00:00:00Z","article_number":"2459","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","oa":1,"isi":1,"type":"journal_article","quality_controlled":"1","oa_version":"Published Version","_id":"7664","volume":21,"scopus_import":"1","department":[{"_id":"RySh"}],"tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"doi":"10.3390/ijms21072459","citation":{"ista":"Martín-Belmonte A, Aguado C, Alfaro-Ruíz R, Moreno-Martínez AE, De La Ossa L, Martínez-Hernández J, Buisson A, Shigemoto R, Fukazawa Y, Luján R. 2020. Density of GABAB receptors is reduced in granule cells of the hippocampus in a mouse model of Alzheimer’s disease. International journal of molecular sciences. 21(7), 2459.","apa":"Martín-Belmonte, A., Aguado, C., Alfaro-Ruíz, R., Moreno-Martínez, A. E., De La Ossa, L., Martínez-Hernández, J., … Luján, R. (2020). Density of GABAB receptors is reduced in granule cells of the hippocampus in a mouse model of Alzheimer’s disease. <i>International Journal of Molecular Sciences</i>. MDPI. <a href=\"https://doi.org/10.3390/ijms21072459\">https://doi.org/10.3390/ijms21072459</a>","ama":"Martín-Belmonte A, Aguado C, Alfaro-Ruíz R, et al. Density of GABAB receptors is reduced in granule cells of the hippocampus in a mouse model of Alzheimer’s disease. <i>International journal of molecular sciences</i>. 2020;21(7). doi:<a href=\"https://doi.org/10.3390/ijms21072459\">10.3390/ijms21072459</a>","mla":"Martín-Belmonte, Alejandro, et al. “Density of GABAB Receptors Is Reduced in Granule Cells of the Hippocampus in a Mouse Model of Alzheimer’s Disease.” <i>International Journal of Molecular Sciences</i>, vol. 21, no. 7, 2459, MDPI, 2020, doi:<a href=\"https://doi.org/10.3390/ijms21072459\">10.3390/ijms21072459</a>.","ieee":"A. Martín-Belmonte <i>et al.</i>, “Density of GABAB receptors is reduced in granule cells of the hippocampus in a mouse model of Alzheimer’s disease,” <i>International journal of molecular sciences</i>, vol. 21, no. 7. MDPI, 2020.","short":"A. Martín-Belmonte, C. Aguado, R. Alfaro-Ruíz, A.E. Moreno-Martínez, L. De La Ossa, J. Martínez-Hernández, A. Buisson, R. Shigemoto, Y. Fukazawa, R. Luján, International Journal of Molecular Sciences 21 (2020).","chicago":"Martín-Belmonte, Alejandro, Carolina Aguado, Rocío Alfaro-Ruíz, Ana Esther Moreno-Martínez, Luis De La Ossa, José Martínez-Hernández, Alain Buisson, Ryuichi Shigemoto, Yugo Fukazawa, and Rafael Luján. “Density of GABAB Receptors Is Reduced in Granule Cells of the Hippocampus in a Mouse Model of Alzheimer’s Disease.” <i>International Journal of Molecular Sciences</i>. MDPI, 2020. <a href=\"https://doi.org/10.3390/ijms21072459\">https://doi.org/10.3390/ijms21072459</a>."},"author":[{"first_name":"Alejandro","last_name":"Martín-Belmonte","full_name":"Martín-Belmonte, Alejandro"},{"last_name":"Aguado","first_name":"Carolina","full_name":"Aguado, Carolina"},{"last_name":"Alfaro-Ruíz","first_name":"Rocío","full_name":"Alfaro-Ruíz, Rocío"},{"full_name":"Moreno-Martínez, Ana Esther","first_name":"Ana Esther","last_name":"Moreno-Martínez"},{"full_name":"De La Ossa, Luis","last_name":"De La Ossa","first_name":"Luis"},{"first_name":"José","last_name":"Martínez-Hernández","full_name":"Martínez-Hernández, José"},{"first_name":"Alain","last_name":"Buisson","full_name":"Buisson, Alain"},{"orcid":"0000-0001-8761-9444","last_name":"Shigemoto","first_name":"Ryuichi","id":"499F3ABC-F248-11E8-B48F-1D18A9856A87","full_name":"Shigemoto, Ryuichi"},{"last_name":"Fukazawa","first_name":"Yugo","full_name":"Fukazawa, Yugo"},{"first_name":"Rafael","last_name":"Luján","full_name":"Luján, Rafael"}],"date_updated":"2026-04-02T14:27:06Z","title":"Density of GABAB receptors is reduced in granule cells of the hippocampus in a mouse model of Alzheimer's disease","publication_identifier":{"eissn":["1422-0067"]},"file_date_updated":"2020-07-14T12:48:01Z","article_type":"original","day":"02","external_id":{"isi":["000535574200201"],"pmid":["32252271"]}},{"publication":"Frontiers in Cellular Neuroscience","month":"03","corr_author":"1","ddc":["570"],"status":"public","publisher":"Frontiers Media","pmid":1,"date_created":"2020-04-19T22:00:55Z","abstract":[{"text":"Acute brain slice preparation is a powerful experimental model for investigating the characteristics of synaptic function in the brain. Although brain tissue is usually cut at ice-cold temperature (CT) to facilitate slicing and avoid neuronal damage, exposure to CT causes molecular and architectural changes of synapses. To address these issues, we investigated ultrastructural and electrophysiological features of synapses in mouse acute cerebellar slices prepared at ice-cold and physiological temperature (PT). In the slices prepared at CT, we found significant spine loss and reconstruction, synaptic vesicle rearrangement and decrease in synaptic proteins, all of which were not detected in slices prepared at PT. Consistent with these structural findings, slices prepared at PT showed higher release probability. Furthermore, preparation at PT allows electrophysiological recording immediately after slicing resulting in higher detectability of long-term depression (LTD) after motor learning compared with that at CT. These results indicate substantial advantages of the slice preparation at PT for investigating synaptic functions in different physiological conditions.","lang":"eng"}],"has_accepted_license":"1","intvolume":"        14","language":[{"iso":"eng"}],"file":[{"content_type":"application/pdf","access_level":"open_access","file_size":9227283,"creator":"dernst","file_name":"2020_FrontiersCellularNeurosc_Eguchi.pdf","checksum":"1c145123c6f8dc3e2e4bd5a66a1ad60e","relation":"main_file","date_created":"2020-04-20T10:59:49Z","date_updated":"2020-07-14T12:48:01Z","file_id":"7668"}],"article_processing_charge":"Yes (via OA deal)","year":"2020","publication_status":"published","date_published":"2020-03-19T00:00:00Z","article_number":"63","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa":1,"type":"journal_article","isi":1,"ec_funded":1,"oa_version":"Published Version","quality_controlled":"1","_id":"7665","volume":14,"department":[{"_id":"JoDa"},{"_id":"RySh"}],"scopus_import":"1","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"citation":{"short":"K. Eguchi, P. Velicky, E. Saeckl, M. Itakura, Y. Fukazawa, J.G. Danzl, R. Shigemoto, Frontiers in Cellular Neuroscience 14 (2020).","chicago":"Eguchi, Kohgaku, Philipp Velicky, Elena Saeckl, Makoto Itakura, Yugo Fukazawa, Johann G Danzl, and Ryuichi Shigemoto. “Advantages of Acute Brain Slices Prepared at Physiological Temperature in the Characterization of Synaptic Functions.” <i>Frontiers in Cellular Neuroscience</i>. Frontiers Media, 2020. <a href=\"https://doi.org/10.3389/fncel.2020.00063\">https://doi.org/10.3389/fncel.2020.00063</a>.","ama":"Eguchi K, Velicky P, Saeckl E, et al. Advantages of acute brain slices prepared at physiological temperature in the characterization of synaptic functions. <i>Frontiers in Cellular Neuroscience</i>. 2020;14. doi:<a href=\"https://doi.org/10.3389/fncel.2020.00063\">10.3389/fncel.2020.00063</a>","apa":"Eguchi, K., Velicky, P., Saeckl, E., Itakura, M., Fukazawa, Y., Danzl, J. G., &#38; Shigemoto, R. (2020). Advantages of acute brain slices prepared at physiological temperature in the characterization of synaptic functions. <i>Frontiers in Cellular Neuroscience</i>. Frontiers Media. <a href=\"https://doi.org/10.3389/fncel.2020.00063\">https://doi.org/10.3389/fncel.2020.00063</a>","ista":"Eguchi K, Velicky P, Saeckl E, Itakura M, Fukazawa Y, Danzl JG, Shigemoto R. 2020. Advantages of acute brain slices prepared at physiological temperature in the characterization of synaptic functions. Frontiers in Cellular Neuroscience. 14, 63.","mla":"Eguchi, Kohgaku, et al. “Advantages of Acute Brain Slices Prepared at Physiological Temperature in the Characterization of Synaptic Functions.” <i>Frontiers in Cellular Neuroscience</i>, vol. 14, 63, Frontiers Media, 2020, doi:<a href=\"https://doi.org/10.3389/fncel.2020.00063\">10.3389/fncel.2020.00063</a>.","ieee":"K. Eguchi <i>et al.</i>, “Advantages of acute brain slices prepared at physiological temperature in the characterization of synaptic functions,” <i>Frontiers in Cellular Neuroscience</i>, vol. 14. Frontiers Media, 2020."},"doi":"10.3389/fncel.2020.00063","project":[{"name":"Ultrastructural analysis of phosphoinositides in nerve terminals: distribution, dynamics and physiological roles in synaptic transmission","grant_number":"793482","call_identifier":"H2020","_id":"2659CC84-B435-11E9-9278-68D0E5697425"},{"name":"In situ analysis of single channel subunit composition in neurons: physiological implication in synaptic plasticity and behaviour","grant_number":"694539","call_identifier":"H2020","_id":"25CA28EA-B435-11E9-9278-68D0E5697425"},{"name":"Optical control of synaptic function via adhesion molecules","grant_number":"I03600","call_identifier":"FWF","_id":"265CB4D0-B435-11E9-9278-68D0E5697425"},{"_id":"B67AFEDC-15C9-11EA-A837-991A96BB2854","name":"IST Austria Open Access Fund"}],"author":[{"full_name":"Eguchi, Kohgaku","id":"2B7846DC-F248-11E8-B48F-1D18A9856A87","last_name":"Eguchi","orcid":"0000-0002-6170-2546","first_name":"Kohgaku"},{"first_name":"Philipp","orcid":"0000-0002-2340-7431","last_name":"Velicky","id":"39BDC62C-F248-11E8-B48F-1D18A9856A87","full_name":"Velicky, Philipp"},{"last_name":"Hollergschwandtner","first_name":"Elena","full_name":"Hollergschwandtner, Elena","id":"3C054040-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Makoto","last_name":"Itakura","full_name":"Itakura, Makoto"},{"full_name":"Fukazawa, Yugo","first_name":"Yugo","last_name":"Fukazawa"},{"full_name":"Danzl, Johann G","id":"42EFD3B6-F248-11E8-B48F-1D18A9856A87","last_name":"Danzl","orcid":"0000-0001-8559-3973","first_name":"Johann G"},{"last_name":"Shigemoto","orcid":"0000-0001-8761-9444","first_name":"Ryuichi","full_name":"Shigemoto, Ryuichi","id":"499F3ABC-F248-11E8-B48F-1D18A9856A87"}],"date_updated":"2025-06-12T07:16:39Z","title":"Advantages of acute brain slices prepared at physiological temperature in the characterization of synaptic functions","file_date_updated":"2020-07-14T12:48:01Z","article_type":"original","publication_identifier":{"issn":["1662-5102"]},"day":"19","external_id":{"isi":["000525582200001"],"pmid":["32265664"]}},{"author":[{"orcid":"0000-0002-9823-6833","last_name":"Edelsbrunner","first_name":"Herbert","id":"3FB178DA-F248-11E8-B48F-1D18A9856A87","full_name":"Edelsbrunner, Herbert"},{"last_name":"Ölsböck","orcid":"0000-0002-4672-8297","first_name":"Katharina","full_name":"Ölsböck, Katharina","id":"4D4AA390-F248-11E8-B48F-1D18A9856A87"}],"date_updated":"2025-04-14T07:48:36Z","title":"Tri-partitions and bases of an ordered complex","acknowledgement":"This project has received funding from the European Research Council under the European Union’s Horizon 2020 research and innovation programme (Grant Agreement No. 78818 Alpha). It is also partially supported by the DFG Collaborative Research Center TRR 109, ‘Discretization in Geometry and Dynamics’, through Grant No. I02979-N35 of the Austrian Science Fund (FWF).","article_type":"original","file_date_updated":"2020-11-20T13:22:21Z","publication_identifier":{"issn":["01795376"],"eissn":["14320444"]},"day":"20","external_id":{"isi":["000520918800001"]},"_id":"7666","quality_controlled":"1","oa_version":"Published Version","scopus_import":"1","department":[{"_id":"HeEd"}],"volume":64,"project":[{"name":"IST Austria Open Access Fund","_id":"B67AFEDC-15C9-11EA-A837-991A96BB2854"},{"call_identifier":"H2020","_id":"266A2E9E-B435-11E9-9278-68D0E5697425","name":"Alpha Shape Theory Extended","grant_number":"788183"},{"name":"Persistence and stability of geometric complexes","grant_number":"I02979-N35","call_identifier":"FWF","_id":"2561EBF4-B435-11E9-9278-68D0E5697425"}],"tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"citation":{"ista":"Edelsbrunner H, Ölsböck K. 2020. Tri-partitions and bases of an ordered complex. Discrete and Computational Geometry. 64, 759–775.","ama":"Edelsbrunner H, Ölsböck K. Tri-partitions and bases of an ordered complex. <i>Discrete and Computational Geometry</i>. 2020;64:759-775. doi:<a href=\"https://doi.org/10.1007/s00454-020-00188-x\">10.1007/s00454-020-00188-x</a>","apa":"Edelsbrunner, H., &#38; Ölsböck, K. (2020). Tri-partitions and bases of an ordered complex. <i>Discrete and Computational Geometry</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00454-020-00188-x\">https://doi.org/10.1007/s00454-020-00188-x</a>","ieee":"H. Edelsbrunner and K. Ölsböck, “Tri-partitions and bases of an ordered complex,” <i>Discrete and Computational Geometry</i>, vol. 64. Springer Nature, pp. 759–775, 2020.","mla":"Edelsbrunner, Herbert, and Katharina Ölsböck. “Tri-Partitions and Bases of an Ordered Complex.” <i>Discrete and Computational Geometry</i>, vol. 64, Springer Nature, 2020, pp. 759–75, doi:<a href=\"https://doi.org/10.1007/s00454-020-00188-x\">10.1007/s00454-020-00188-x</a>.","short":"H. Edelsbrunner, K. Ölsböck, Discrete and Computational Geometry 64 (2020) 759–775.","chicago":"Edelsbrunner, Herbert, and Katharina Ölsböck. “Tri-Partitions and Bases of an Ordered Complex.” <i>Discrete and Computational Geometry</i>. Springer Nature, 2020. <a href=\"https://doi.org/10.1007/s00454-020-00188-x\">https://doi.org/10.1007/s00454-020-00188-x</a>."},"doi":"10.1007/s00454-020-00188-x","article_processing_charge":"Yes (via OA deal)","year":"2020","publication_status":"published","file":[{"file_size":701673,"access_level":"open_access","content_type":"application/pdf","date_created":"2020-11-20T13:22:21Z","relation":"main_file","creator":"dernst","file_name":"2020_DiscreteCompGeo_Edelsbrunner.pdf","checksum":"f8cc96e497f00c38340b5dafe0cb91d7","date_updated":"2020-11-20T13:22:21Z","file_id":"8786","success":1}],"user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","date_published":"2020-03-20T00:00:00Z","page":"759-775","ec_funded":1,"isi":1,"type":"journal_article","oa":1,"month":"03","corr_author":"1","ddc":["510"],"status":"public","publication":"Discrete and Computational Geometry","has_accepted_license":"1","date_created":"2020-04-19T22:00:56Z","abstract":[{"lang":"eng","text":"Generalizing the decomposition of a connected planar graph into a tree and a dual tree, we prove a combinatorial analog of the classic Helmholtz–Hodge decomposition of a smooth vector field. Specifically, we show that for every polyhedral complex, K, and every dimension, p, there is a partition of the set of p-cells into a maximal p-tree, a maximal p-cotree, and a collection of p-cells whose cardinality is the p-th reduced Betti number of K. Given an ordering of the p-cells, this tri-partition is unique, and it can be computed by a matrix reduction algorithm that also constructs canonical bases of cycle and boundary groups."}],"publisher":"Springer Nature","language":[{"iso":"eng"}],"intvolume":"        64"},{"citation":{"ista":"Samojlov A, Schuster D, Kahr J, Freunberger SA. 2020. Surface and catalyst driven singlet oxygen formation in Li-O2 cells. Electrochimica Acta. 362(12), 137175.","apa":"Samojlov, A., Schuster, D., Kahr, J., &#38; Freunberger, S. A. (2020). Surface and catalyst driven singlet oxygen formation in Li-O2 cells. <i>Electrochimica Acta</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.electacta.2020.137175\">https://doi.org/10.1016/j.electacta.2020.137175</a>","ama":"Samojlov A, Schuster D, Kahr J, Freunberger SA. Surface and catalyst driven singlet oxygen formation in Li-O2 cells. <i>Electrochimica Acta</i>. 2020;362(12). doi:<a href=\"https://doi.org/10.1016/j.electacta.2020.137175\">10.1016/j.electacta.2020.137175</a>","ieee":"A. Samojlov, D. Schuster, J. Kahr, and S. A. Freunberger, “Surface and catalyst driven singlet oxygen formation in Li-O2 cells,” <i>Electrochimica Acta</i>, vol. 362, no. 12. Elsevier, 2020.","mla":"Samojlov, Aleksej, et al. “Surface and Catalyst Driven Singlet Oxygen Formation in Li-O2 Cells.” <i>Electrochimica Acta</i>, vol. 362, no. 12, 137175, Elsevier, 2020, doi:<a href=\"https://doi.org/10.1016/j.electacta.2020.137175\">10.1016/j.electacta.2020.137175</a>.","short":"A. Samojlov, D. Schuster, J. Kahr, S.A. Freunberger, Electrochimica Acta 362 (2020).","chicago":"Samojlov, Aleksej, David Schuster, Jürgen Kahr, and Stefan Alexander Freunberger. “Surface and Catalyst Driven Singlet Oxygen Formation in Li-O2 Cells.” <i>Electrochimica Acta</i>. Elsevier, 2020. <a href=\"https://doi.org/10.1016/j.electacta.2020.137175\">https://doi.org/10.1016/j.electacta.2020.137175</a>."},"tmp":{"image":"/images/cc_by_nc_nd.png","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","short":"CC BY-NC-ND (4.0)"},"doi":"10.1016/j.electacta.2020.137175","department":[{"_id":"StFr"}],"scopus_import":"1","volume":362,"_id":"7672","quality_controlled":"1","oa_version":"Published Version","license":"https://creativecommons.org/licenses/by-nc-nd/4.0/","external_id":{"isi":["000582869700060"]},"day":"01","acknowledgement":"S.A.F. thanks the International Society of Electrochemistry for awarding the Tajima Prize 2019 “in recognition of outstanding re- searches on Li-Air batteries by the use of a range of in-situ elec- trochemical methods to achieve comprehensive understanding of the reactions taking place at the oxygen electrode”. This article is dedicated to the special issue of Electrochmica Acta associated with the awarding conference. S.A.F. is indebted to and the Austrian Federal Ministry of Science, Research and Economy and the Austrian Research Promotion Agency (grant No. 845364 ) and the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (grant agreement No 636069). The authors thank J. Schlegl for manufacturing instrumentation, M. Winkler of Acib GmbH and G. Strohmeier for help with HPLC measurements, S. Eder for cyclic voltammetry measurements, and C. Slugovc for discussions and continuous support. We thank S. Borisov for access and advice with fluorescence measurements. We thank EL-Cell GmbH, Hamburg, Germany for providing the PAT-Cell-Press electrochemical cell.","file_date_updated":"2020-10-01T13:20:45Z","article_type":"original","title":"Surface and catalyst driven singlet oxygen formation in Li-O2 cells","date_updated":"2024-10-09T20:59:27Z","author":[{"last_name":"Samojlov","first_name":"Aleksej","full_name":"Samojlov, Aleksej"},{"full_name":"Schuster, David","last_name":"Schuster","first_name":"David"},{"first_name":"Jürgen","last_name":"Kahr","full_name":"Kahr, Jürgen"},{"id":"A8CA28E6-CE23-11E9-AD2D-EC27E6697425","full_name":"Freunberger, Stefan Alexander","first_name":"Stefan Alexander","orcid":"0000-0003-2902-5319","last_name":"Freunberger"}],"language":[{"iso":"eng"}],"intvolume":"       362","date_created":"2020-04-20T19:29:31Z","abstract":[{"text":"Large overpotentials upon discharge and charge of Li-O2 cells have motivated extensive research into heterogeneous solid electrocatalysts or non-carbon electrodes with the aim to improve rate capability, round-trip efficiency and cycle life. These features are equally governed by parasitic reactions, which are now recognized to be caused by the highly reactive singlet oxygen (1O2). However, the link between the presence of electrocatalysts and 1O2 formation in metal-O2 cells is unknown. Here, we show that, compared to pristine carbon black electrodes, a representative selection of electrocatalysts or non-carbon electrodes (noble metal, transition metal compounds) may both slightly reduce or severely increase the 1O2 formation. The individual reaction steps, where the surfaces impact the 1O2 yield are deciphered, showing that 1O2 yield from superoxide disproportionation as well as the decomposition of trace H2O2 are sensitive to catalysts. Transition metal compounds in general are prone to increase 1O2.","lang":"eng"}],"has_accepted_license":"1","publisher":"Elsevier","status":"public","publication":"Electrochimica Acta","corr_author":"1","ddc":["540"],"month":"12","issue":"12","isi":1,"type":"journal_article","oa":1,"user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","article_number":"137175","date_published":"2020-12-01T00:00:00Z","publication_status":"published","article_processing_charge":"Yes (via OA deal)","year":"2020","file":[{"file_size":1404030,"access_level":"open_access","content_type":"application/pdf","date_created":"2020-10-01T13:20:45Z","relation":"main_file","file_name":"2020_ElectrochimicaActa_Samojlov.pdf","creator":"dernst","checksum":"1ab1aa2024d431e2a089ea336bc08298","date_updated":"2020-10-01T13:20:45Z","success":1,"file_id":"8593"}]},{"title":"Cohomological Hall algebras for Higgs torsion sheaves, moduli of triples and sheaves on surfaces","date_updated":"2025-05-20T10:38:32Z","author":[{"id":"3E7C5304-F248-11E8-B48F-1D18A9856A87","full_name":"Minets, Sasha","orcid":"0000-0003-3883-1806","last_name":"Minets","first_name":"Sasha"}],"external_id":{"isi":["000526036400001"],"arxiv":["1801.01429"]},"arxiv":1,"day":"15","file_date_updated":"2020-07-14T12:48:02Z","article_type":"original","publication_identifier":{"eissn":["1420-9020"],"issn":["1022-1824"]},"oa_version":"Published Version","quality_controlled":"1","_id":"7683","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"citation":{"mla":"Minets, Sasha. “Cohomological Hall Algebras for Higgs Torsion Sheaves, Moduli of Triples and Sheaves on Surfaces.” <i>Selecta Mathematica, New Series</i>, vol. 26, no. 2, 30, Springer Nature, 2020, doi:<a href=\"https://doi.org/10.1007/s00029-020-00553-x\">10.1007/s00029-020-00553-x</a>.","ieee":"S. Minets, “Cohomological Hall algebras for Higgs torsion sheaves, moduli of triples and sheaves on surfaces,” <i>Selecta Mathematica, New Series</i>, vol. 26, no. 2. Springer Nature, 2020.","ista":"Minets S. 2020. Cohomological Hall algebras for Higgs torsion sheaves, moduli of triples and sheaves on surfaces. Selecta Mathematica, New Series. 26(2), 30.","apa":"Minets, S. (2020). Cohomological Hall algebras for Higgs torsion sheaves, moduli of triples and sheaves on surfaces. <i>Selecta Mathematica, New Series</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00029-020-00553-x\">https://doi.org/10.1007/s00029-020-00553-x</a>","ama":"Minets S. Cohomological Hall algebras for Higgs torsion sheaves, moduli of triples and sheaves on surfaces. <i>Selecta Mathematica, New Series</i>. 2020;26(2). doi:<a href=\"https://doi.org/10.1007/s00029-020-00553-x\">10.1007/s00029-020-00553-x</a>","chicago":"Minets, Sasha. “Cohomological Hall Algebras for Higgs Torsion Sheaves, Moduli of Triples and Sheaves on Surfaces.” <i>Selecta Mathematica, New Series</i>. Springer Nature, 2020. <a href=\"https://doi.org/10.1007/s00029-020-00553-x\">https://doi.org/10.1007/s00029-020-00553-x</a>.","short":"S. Minets, Selecta Mathematica, New Series 26 (2020)."},"doi":"10.1007/s00029-020-00553-x","project":[{"name":"IST Austria Open Access Fund","_id":"B67AFEDC-15C9-11EA-A837-991A96BB2854"}],"volume":26,"department":[{"_id":"TaHa"}],"scopus_import":"1","date_published":"2020-04-15T00:00:00Z","article_number":"30","user_id":"9947682f-b9fa-11ee-9c4a-b3ffaafe6614","file":[{"file_id":"7690","date_updated":"2020-07-14T12:48:02Z","file_name":"2020_SelectaMathematica_Minets.pdf","checksum":"2368c4662629b4759295eb365323b2ad","creator":"dernst","date_created":"2020-04-28T10:57:58Z","relation":"main_file","access_level":"open_access","content_type":"application/pdf","file_size":792469}],"publication_status":"published","article_processing_charge":"Yes (via OA deal)","year":"2020","oa":1,"isi":1,"type":"journal_article","corr_author":"1","month":"04","ddc":["510"],"status":"public","publication":"Selecta Mathematica, New Series","issue":"2","intvolume":"        26","language":[{"iso":"eng"}],"publisher":"Springer Nature","date_created":"2020-04-26T22:00:44Z","has_accepted_license":"1","abstract":[{"text":"For any free oriented Borel–Moore homology theory A, we construct an associative product on the A-theory of the stack of Higgs torsion sheaves over a projective curve C. We show that the resulting algebra AHa0C admits a natural shuffle presentation, and prove it is faithful when A is replaced with usual Borel–Moore homology groups. We also introduce moduli spaces of stable triples, heavily inspired by Nakajima quiver varieties, whose A-theory admits an AHa0C-action. These triples can be interpreted as certain sheaves on PC(ωC⊕OC). In particular, we obtain an action of AHa0C on the cohomology of Hilbert schemes of points on T∗C.","lang":"eng"}]},{"page":"291-300.e6","oa":1,"isi":1,"type":"journal_article","ec_funded":1,"publication_status":"published","article_processing_charge":"No","year":"2020","date_published":"2020-04-22T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publisher":"Elsevier","pmid":1,"date_created":"2020-04-26T22:00:45Z","intvolume":"       106","language":[{"iso":"eng"}],"issue":"2","status":"public","publication":"Neuron","month":"04","ddc":["570"],"day":"22","publication_identifier":{"issn":["0896-6273"],"eissn":["1097-4199"]},"article_type":"original","related_material":{"link":[{"relation":"press_release","url":"https://ist.ac.at/en/news/librarian-of-memory/","description":"News on IST Homepage"}]},"external_id":{"isi":["000528268200013"],"pmid":["32070475"]},"author":[{"id":"4B60654C-F248-11E8-B48F-1D18A9856A87","full_name":"Gridchyn, Igor","orcid":"0000-0002-1807-1929","last_name":"Gridchyn","first_name":"Igor"},{"first_name":"Philipp","last_name":"Schönenberger","id":"3B9D816C-F248-11E8-B48F-1D18A9856A87","full_name":"Schönenberger, Philipp"},{"id":"426376DC-F248-11E8-B48F-1D18A9856A87","full_name":"O'Neill, Joseph","last_name":"O'Neill","first_name":"Joseph"},{"full_name":"Csicsvari, Jozsef L","id":"3FA14672-F248-11E8-B48F-1D18A9856A87","first_name":"Jozsef L","last_name":"Csicsvari","orcid":"0000-0002-5193-4036"}],"title":"Assembly-specific disruption of hippocampal replay leads to selective memory deficit","date_updated":"2026-06-18T19:26:54Z","volume":106,"scopus_import":"1","department":[{"_id":"JoCs"}],"doi":"10.1016/j.neuron.2020.01.021","citation":{"mla":"Gridchyn, Igor, et al. “Assembly-Specific Disruption of Hippocampal Replay Leads to Selective Memory Deficit.” <i>Neuron</i>, vol. 106, no. 2, Elsevier, 2020, p. 291–300.e6, doi:<a href=\"https://doi.org/10.1016/j.neuron.2020.01.021\">10.1016/j.neuron.2020.01.021</a>.","ieee":"I. Gridchyn, P. Schönenberger, J. O’Neill, and J. L. Csicsvari, “Assembly-specific disruption of hippocampal replay leads to selective memory deficit,” <i>Neuron</i>, vol. 106, no. 2. Elsevier, p. 291–300.e6, 2020.","apa":"Gridchyn, I., Schönenberger, P., O’Neill, J., &#38; Csicsvari, J. L. (2020). Assembly-specific disruption of hippocampal replay leads to selective memory deficit. <i>Neuron</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.neuron.2020.01.021\">https://doi.org/10.1016/j.neuron.2020.01.021</a>","ista":"Gridchyn I, Schönenberger P, O’Neill J, Csicsvari JL. 2020. Assembly-specific disruption of hippocampal replay leads to selective memory deficit. Neuron. 106(2), 291–300.e6.","ama":"Gridchyn I, Schönenberger P, O’Neill J, Csicsvari JL. Assembly-specific disruption of hippocampal replay leads to selective memory deficit. <i>Neuron</i>. 2020;106(2):291-300.e6. doi:<a href=\"https://doi.org/10.1016/j.neuron.2020.01.021\">10.1016/j.neuron.2020.01.021</a>","chicago":"Gridchyn, Igor, Philipp Schönenberger, Joseph O’Neill, and Jozsef L Csicsvari. “Assembly-Specific Disruption of Hippocampal Replay Leads to Selective Memory Deficit.” <i>Neuron</i>. Elsevier, 2020. <a href=\"https://doi.org/10.1016/j.neuron.2020.01.021\">https://doi.org/10.1016/j.neuron.2020.01.021</a>.","short":"I. Gridchyn, P. Schönenberger, J. O’Neill, J.L. Csicsvari, Neuron 106 (2020) 291–300.e6."},"project":[{"_id":"257A4776-B435-11E9-9278-68D0E5697425","call_identifier":"FP7","grant_number":"281511","name":"Memory-related information processing in neuronal circuits of the hippocampus and entorhinal cortex"}],"quality_controlled":"1","oa_version":"Published Version","main_file_link":[{"url":"https://doi.org/10.1016/j.neuron.2020.01.021","open_access":"1"}],"_id":"7684"},{"oa_version":"Published Version","_id":"7687","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"citation":{"ieee":"D. Ernst, G. Novotny, and E. M. Schönher, “(Core Trust) Seal your repository!,” <i>Mitteilungen der Vereinigung Österreichischer Bibliothekarinnen und Bibliothekare</i>, vol. 73, no. 1. Vereinigung Österreichischer Bibliothekarinnen und Bibliothekare, pp. 46–59, 2020.","mla":"Ernst, Doris, et al. “(Core Trust) Seal your repository!” <i>Mitteilungen der Vereinigung Österreichischer Bibliothekarinnen und Bibliothekare</i>, vol. 73, no. 1, Vereinigung Österreichischer Bibliothekarinnen und Bibliothekare, 2020, pp. 46–59, doi:<a href=\"https://doi.org/10.31263/voebm.v73i1.3491\">10.31263/voebm.v73i1.3491</a>.","ista":"Ernst D, Novotny G, Schönher EM. 2020. (Core Trust) Seal your repository! Mitteilungen der Vereinigung Österreichischer Bibliothekarinnen und Bibliothekare. 73(1), 46–59.","ama":"Ernst D, Novotny G, Schönher EM. (Core Trust) Seal your repository! <i>Mitteilungen der Vereinigung Österreichischer Bibliothekarinnen und Bibliothekare</i>. 2020;73(1):46-59. doi:<a href=\"https://doi.org/10.31263/voebm.v73i1.3491\">10.31263/voebm.v73i1.3491</a>","apa":"Ernst, D., Novotny, G., &#38; Schönher, E. M. (2020). (Core Trust) Seal your repository! <i>Mitteilungen der Vereinigung Österreichischer Bibliothekarinnen und Bibliothekare</i>. Vereinigung Österreichischer Bibliothekarinnen und Bibliothekare. <a href=\"https://doi.org/10.31263/voebm.v73i1.3491\">https://doi.org/10.31263/voebm.v73i1.3491</a>","chicago":"Ernst, Doris, Gertraud Novotny, and Eva Maria Schönher. “(Core Trust) Seal your repository!” <i>Mitteilungen der Vereinigung Österreichischer Bibliothekarinnen und Bibliothekare</i>. Vereinigung Österreichischer Bibliothekarinnen und Bibliothekare, 2020. <a href=\"https://doi.org/10.31263/voebm.v73i1.3491\">https://doi.org/10.31263/voebm.v73i1.3491</a>.","short":"D. Ernst, G. Novotny, E.M. Schönher, Mitteilungen der Vereinigung Österreichischer Bibliothekarinnen und Bibliothekare 73 (2020) 46–59."},"doi":"10.31263/voebm.v73i1.3491","volume":73,"department":[{"_id":"E-Lib"}],"scopus_import":"1","date_updated":"2026-03-16T13:47:31Z","title":"(Core Trust) Seal your repository!","author":[{"full_name":"Ernst, Doris","id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","last_name":"Ernst","orcid":"0000-0002-2354-0195","first_name":"Doris"},{"full_name":"Novotny, Gertraud","first_name":"Gertraud","last_name":"Novotny"},{"first_name":"Eva Maria","last_name":"Schönher","full_name":"Schönher, Eva Maria"}],"external_id":{"oaworkid":["W3021112752"]},"publication_identifier":{"issn":["1022-2588"]},"article_type":"original","file_date_updated":"2024-03-12T10:12:33Z","day":"28","ddc":["020"],"month":"04","status":"public","corr_author":"1","publication":"Mitteilungen der Vereinigung Österreichischer Bibliothekarinnen und Bibliothekare","oaworkid":1,"issue":"1","intvolume":"        73","language":[{"iso":"ger"}],"publisher":"Vereinigung Österreichischer Bibliothekarinnen und Bibliothekare","has_accepted_license":"1","date_created":"2020-04-28T08:37:38Z","abstract":[{"lang":"eng","text":"A working group, which was established within the Network of Repository Managers  (RepManNet),  has  dealt  with  common  certifications  for  repositories.  In addition,  current  requirements  of  the  research  funding  agencies  FWF  and  EU  were also taken into account. The Core Trust Seal was examined in more detail. For this purpose,  a  questionnaire  was  sent  to  those  organizations  that  are  already  certified with CTS in Austria. The answers were summarized and evaluated anonymously. It is recommended to go for a repository certification. Moreover, the development of a DINI certificate in Austria is strongly suggested."},{"lang":"ger","text":" Eine Arbeitsgruppe, die im Rahmen des Netzwerks für RepositorienmanagerInnen (RepManNet) entstanden ist, hat sich mit gängigen Zertifizierungen für Repositorien beschäftigt. Weiters wurden aktuelle Vorgaben der Forschungsförderer FWF und EU herangezogen. Das Core Trust Seal wurde genauer betrachtet. Hierfür  wurden jenen  Organisationen,  die  in  Österreich  bereits  mit  CTS  zertifiziert sind, ein Fragebogen übermittelt. Die Antworten wurden anonymisiert zusammengefasst und ausgewertet. Plädiert wird für eine Zertifizierung von Repositorien und die Entwicklung einer DINI-Zertifizierung in Österreich."}],"date_published":"2020-04-28T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","file":[{"file_id":"7970","date_updated":"2024-03-12T10:12:33Z","relation":"main_file","date_created":"2020-06-17T10:50:13Z","creator":"dernst","checksum":"fee784f15a489deb7def6ccf8c5bf8c3","file_name":"2020_VOEB_Ernst.pdf","file_size":579291,"content_type":"application/pdf","access_level":"open_access"}],"year":"2020","article_processing_charge":"No","popular_science":"1","publication_status":"published","oa":1,"type":"journal_article","page":"46-59"},{"contributor":[{"first_name":"Georgios","last_name":"Katsaros","id":"38DB5788-F248-11E8-B48F-1D18A9856A87","contributor_type":"contact_person"}],"license":"https://creativecommons.org/publicdomain/zero/1.0/","day":"01","related_material":{"record":[{"relation":"used_in_publication","id":"8203","status":"public"}]},"file_date_updated":"2020-07-14T12:48:02Z","title":"Supplementary data for \"Zero field splitting of heavy-hole states in quantum dots\"","date_updated":"2025-04-15T08:39:16Z","author":[{"id":"38DB5788-F248-11E8-B48F-1D18A9856A87","full_name":"Katsaros, Georgios","orcid":"0000-0001-8342-202X","last_name":"Katsaros","first_name":"Georgios"}],"project":[{"name":"TOPOLOGICALLY PROTECTED AND SCALABLE QUANTUM BITS","grant_number":"862046","call_identifier":"H2020","_id":"237E5020-32DE-11EA-91FC-C7463DDC885E"},{"name":"Towards scalable hut wire quantum devices","grant_number":"P32235","call_identifier":"FWF","_id":"237B3DA4-32DE-11EA-91FC-C7463DDC885E"}],"doi":"10.15479/AT:ISTA:7689","tmp":{"short":"CC0 (1.0)","name":"Creative Commons Public Domain Dedication (CC0 1.0)","legal_code_url":"https://creativecommons.org/publicdomain/zero/1.0/legalcode","image":"/images/cc_0.png"},"citation":{"short":"G. Katsaros, (2020).","chicago":"Katsaros, Georgios. “Supplementary Data for ‘Zero Field Splitting of Heavy-Hole States in Quantum Dots.’” Institute of Science and Technology Austria, 2020. <a href=\"https://doi.org/10.15479/AT:ISTA:7689\">https://doi.org/10.15479/AT:ISTA:7689</a>.","apa":"Katsaros, G. (2020). Supplementary data for “Zero field splitting of heavy-hole states in quantum dots.” Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT:ISTA:7689\">https://doi.org/10.15479/AT:ISTA:7689</a>","ama":"Katsaros G. Supplementary data for “Zero field splitting of heavy-hole states in quantum dots.” 2020. doi:<a href=\"https://doi.org/10.15479/AT:ISTA:7689\">10.15479/AT:ISTA:7689</a>","ista":"Katsaros G. 2020. Supplementary data for ‘Zero field splitting of heavy-hole states in quantum dots’, Institute of Science and Technology Austria, <a href=\"https://doi.org/10.15479/AT:ISTA:7689\">10.15479/AT:ISTA:7689</a>.","ieee":"G. Katsaros, “Supplementary data for ‘Zero field splitting of heavy-hole states in quantum dots.’” Institute of Science and Technology Austria, 2020.","mla":"Katsaros, Georgios. <i>Supplementary Data for “Zero Field Splitting of Heavy-Hole States in Quantum Dots.”</i> Institute of Science and Technology Austria, 2020, doi:<a href=\"https://doi.org/10.15479/AT:ISTA:7689\">10.15479/AT:ISTA:7689</a>."},"department":[{"_id":"GeKa"}],"_id":"7689","oa_version":"Published Version","type":"research_data","ec_funded":1,"oa":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2020-05-01T00:00:00Z","article_processing_charge":"No","year":"2020","file":[{"file_id":"7786","date_updated":"2020-07-14T12:48:02Z","date_created":"2020-05-01T15:13:28Z","relation":"main_file","checksum":"d23c0cb9e2d19e14e2f902b88b97c05d","file_name":"DOI_ZeroFieldSplitting.zip","creator":"gkatsaro","file_size":5514403,"access_level":"open_access","content_type":"application/x-zip-compressed"}],"date_created":"2020-05-01T15:14:46Z","abstract":[{"text":"These are the supplementary research data to the publication \"Zero field splitting of heavy-hole states in quantum dots\". All matrix files have the same format. Within each column the bias voltage is changed. Each column corresponds to either a different gate voltage or magnetic field. The voltage values are given in mV, the current values in pA. Find a specific description in the included Readme file.\r\n","lang":"eng"}],"has_accepted_license":"1","publisher":"Institute of Science and Technology Austria","corr_author":"1","ddc":["530"],"month":"05","status":"public"},{"author":[{"last_name":"Wang","first_name":"J","full_name":"Wang, J"},{"full_name":"Mylle, E","first_name":"E","last_name":"Mylle"},{"first_name":"Alexander J","last_name":"Johnson","orcid":"0000-0002-2739-8843","full_name":"Johnson, Alexander J","id":"46A62C3A-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Besbrugge","first_name":"N","full_name":"Besbrugge, N"},{"full_name":"De Jaeger, G","last_name":"De Jaeger","first_name":"G"},{"full_name":"Friml, Jiří","id":"4159519E-F248-11E8-B48F-1D18A9856A87","first_name":"Jiří","last_name":"Friml","orcid":"0000-0002-8302-7596"},{"last_name":"Pleskot","first_name":"R","full_name":"Pleskot, R"},{"first_name":"D","last_name":"van Damme","full_name":"van Damme, D"}],"title":"High temporal resolution reveals simultaneous plasma membrane recruitment of TPLATE complex subunits","date_updated":"2025-04-15T07:32:09Z","day":"01","article_type":"original","publication_identifier":{"eissn":["1532-2548"],"issn":["0032-0889"]},"external_id":{"isi":["000550682000018"],"pmid":["32321842"]},"_id":"7695","oa_version":"Preprint","quality_controlled":"1","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1101/2020.02.13.948109"}],"scopus_import":"1","department":[{"_id":"JiFr"}],"volume":183,"project":[{"call_identifier":"FWF","_id":"26538374-B435-11E9-9278-68D0E5697425","name":"Molecular mechanisms of endocytic cargo recognition in plants","grant_number":"I03630"}],"doi":"10.1104/pp.20.00178","citation":{"short":"J. Wang, E. Mylle, A.J. Johnson, N. Besbrugge, G. De Jaeger, J. Friml, R. Pleskot, D. van Damme, Plant Physiology 183 (2020) 986–997.","chicago":"Wang, J, E Mylle, Alexander J Johnson, N Besbrugge, G De Jaeger, Jiří Friml, R Pleskot, and D van Damme. “High Temporal Resolution Reveals Simultaneous Plasma Membrane Recruitment of TPLATE Complex Subunits.” <i>Plant Physiology</i>. American Society of Plant Biologists, 2020. <a href=\"https://doi.org/10.1104/pp.20.00178\">https://doi.org/10.1104/pp.20.00178</a>.","ama":"Wang J, Mylle E, Johnson AJ, et al. High temporal resolution reveals simultaneous plasma membrane recruitment of TPLATE complex subunits. <i>Plant Physiology</i>. 2020;183(3):986-997. doi:<a href=\"https://doi.org/10.1104/pp.20.00178\">10.1104/pp.20.00178</a>","ista":"Wang J, Mylle E, Johnson AJ, Besbrugge N, De Jaeger G, Friml J, Pleskot R, van Damme D. 2020. High temporal resolution reveals simultaneous plasma membrane recruitment of TPLATE complex subunits. Plant Physiology. 183(3), 986–997.","apa":"Wang, J., Mylle, E., Johnson, A. J., Besbrugge, N., De Jaeger, G., Friml, J., … van Damme, D. (2020). High temporal resolution reveals simultaneous plasma membrane recruitment of TPLATE complex subunits. <i>Plant Physiology</i>. American Society of Plant Biologists. <a href=\"https://doi.org/10.1104/pp.20.00178\">https://doi.org/10.1104/pp.20.00178</a>","mla":"Wang, J., et al. “High Temporal Resolution Reveals Simultaneous Plasma Membrane Recruitment of TPLATE Complex Subunits.” <i>Plant Physiology</i>, vol. 183, no. 3, American Society of Plant Biologists, 2020, pp. 986–97, doi:<a href=\"https://doi.org/10.1104/pp.20.00178\">10.1104/pp.20.00178</a>.","ieee":"J. Wang <i>et al.</i>, “High temporal resolution reveals simultaneous plasma membrane recruitment of TPLATE complex subunits,” <i>Plant Physiology</i>, vol. 183, no. 3. American Society of Plant Biologists, pp. 986–997, 2020."},"publication_status":"published","article_processing_charge":"No","year":"2020","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","date_published":"2020-07-01T00:00:00Z","page":"986-997","isi":1,"type":"journal_article","oa":1,"issue":"3","month":"07","status":"public","publication":"Plant Physiology","date_created":"2020-04-29T15:23:00Z","pmid":1,"abstract":[{"lang":"eng","text":"The TPLATE complex (TPC) is a key endocytic adaptor protein complex in plants. TPC in Arabidopsis (Arabidopsis thaliana) contains six evolutionarily conserved subunits and two plant-specific subunits, AtEH1/Pan1 and AtEH2/Pan1, although cytoplasmic proteins are not associated with the hexameric subcomplex in the cytoplasm. To investigate the dynamic assembly of the octameric TPC at the plasma membrane (PM), we performed state-of-the-art dual-color live cell imaging at physiological and lowered temperatures. Lowering the temperature slowed down endocytosis, thereby enhancing the temporal resolution of the differential recruitment of endocytic components. Under both normal and lowered temperature conditions, the core TPC subunit TPLATE and the AtEH/Pan1 proteins exhibited simultaneous recruitment at the PM. These results, together with co-localization analysis of different TPC subunits, allow us to conclude that TPC in plant cells is not recruited to the PM sequentially but as an octameric complex."}],"publisher":"American Society of Plant Biologists","language":[{"iso":"eng"}],"intvolume":"       183"}]