[{"date_published":"2020-11-01T00:00:00Z","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","file":[{"success":1,"file_id":"8826","date_updated":"2020-12-02T08:50:38Z","creator":"dernst","checksum":"cc67a79a67bef441625fcb1cd031db3d","file_name":"2020_ArchiveRatMech_Bossmann.pdf","relation":"main_file","date_created":"2020-12-02T08:50:38Z","content_type":"application/pdf","access_level":"open_access","file_size":942343}],"article_processing_charge":"Yes (via OA deal)","year":"2020","publication_status":"published","oa":1,"ec_funded":1,"isi":1,"type":"journal_article","page":"541-606","publication":"Archive for Rational Mechanics and Analysis","month":"11","status":"public","ddc":["510"],"corr_author":"1","issue":"11","intvolume":"       238","language":[{"iso":"eng"}],"publisher":"Springer Nature","abstract":[{"lang":"eng","text":"We study the dynamics of a system of N interacting bosons in a disc-shaped trap, which is realised by an external potential that confines the bosons in one spatial dimension to an interval of length of order ε. The interaction is non-negative and scaled in such a way that its scattering length is of order ε/N, while its range is proportional to (ε/N)β with scaling parameter β∈(0,1]. We consider the simultaneous limit (N,ε)→(∞,0) and assume that the system initially exhibits Bose–Einstein condensation. We prove that condensation is preserved by the N-body dynamics, where the time-evolved condensate wave function is the solution of a two-dimensional non-linear equation. The strength of the non-linearity depends on the scaling parameter β. For β∈(0,1), we obtain a cubic defocusing non-linear Schrödinger equation, while the choice β=1 yields a Gross–Pitaevskii equation featuring the scattering length of the interaction. In both cases, the coupling parameter depends on the confining potential."}],"date_created":"2020-07-18T15:06:35Z","has_accepted_license":"1","date_updated":"2025-04-14T07:44:05Z","title":"Derivation of the 2d Gross–Pitaevskii equation for strongly confined 3d Bosons","author":[{"first_name":"Lea","last_name":"Bossmann","orcid":"0000-0002-6854-1343","full_name":"Bossmann, Lea","id":"A2E3BCBE-5FCC-11E9-AA4B-76F3E5697425"}],"external_id":{"arxiv":["1907.04547"],"isi":["000550164400001"]},"arxiv":1,"article_type":"original","file_date_updated":"2020-12-02T08:50:38Z","publication_identifier":{"issn":["0003-9527"],"eissn":["1432-0673"]},"acknowledgement":"Open access funding provided by Institute of Science and Technology (IST Austria). I thank Stefan Teufel for helpful remarks and for his involvement in the closely related joint project [10]. Helpful discussions with Serena Cenatiempo and Nikolai Leopold are gratefully acknowledged. This work was supported by the German Research Foundation within the Research Training Group 1838 “Spectral Theory and Dynamics of Quantum Systems” and has received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie Grant Agreement No. 754411.","day":"01","oa_version":"Published Version","quality_controlled":"1","_id":"8130","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"citation":{"apa":"Bossmann, L. (2020). Derivation of the 2d Gross–Pitaevskii equation for strongly confined 3d Bosons. <i>Archive for Rational Mechanics and Analysis</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00205-020-01548-w\">https://doi.org/10.1007/s00205-020-01548-w</a>","ista":"Bossmann L. 2020. Derivation of the 2d Gross–Pitaevskii equation for strongly confined 3d Bosons. Archive for Rational Mechanics and Analysis. 238(11), 541–606.","ama":"Bossmann L. Derivation of the 2d Gross–Pitaevskii equation for strongly confined 3d Bosons. <i>Archive for Rational Mechanics and Analysis</i>. 2020;238(11):541-606. doi:<a href=\"https://doi.org/10.1007/s00205-020-01548-w\">10.1007/s00205-020-01548-w</a>","mla":"Bossmann, Lea. “Derivation of the 2d Gross–Pitaevskii Equation for Strongly Confined 3d Bosons.” <i>Archive for Rational Mechanics and Analysis</i>, vol. 238, no. 11, Springer Nature, 2020, pp. 541–606, doi:<a href=\"https://doi.org/10.1007/s00205-020-01548-w\">10.1007/s00205-020-01548-w</a>.","ieee":"L. Bossmann, “Derivation of the 2d Gross–Pitaevskii equation for strongly confined 3d Bosons,” <i>Archive for Rational Mechanics and Analysis</i>, vol. 238, no. 11. Springer Nature, pp. 541–606, 2020.","short":"L. Bossmann, Archive for Rational Mechanics and Analysis 238 (2020) 541–606.","chicago":"Bossmann, Lea. “Derivation of the 2d Gross–Pitaevskii Equation for Strongly Confined 3d Bosons.” <i>Archive for Rational Mechanics and Analysis</i>. Springer Nature, 2020. <a href=\"https://doi.org/10.1007/s00205-020-01548-w\">https://doi.org/10.1007/s00205-020-01548-w</a>."},"doi":"10.1007/s00205-020-01548-w","project":[{"name":"ISTplus - Postdoctoral Fellowships","grant_number":"754411","call_identifier":"H2020","_id":"260C2330-B435-11E9-9278-68D0E5697425"},{"name":"IST Austria Open Access Fund","_id":"B67AFEDC-15C9-11EA-A837-991A96BB2854"}],"volume":238,"scopus_import":"1","department":[{"_id":"RoSe"}]},{"intvolume":"         5","OA_type":"green","language":[{"iso":"eng"}],"publisher":"AAAS","date_created":"2020-07-19T22:00:58Z","abstract":[{"text":"The WAVE regulatory complex (WRC) is crucial for assembly of the peripheral branched actin network constituting one of the main drivers of eukaryotic cell migration. Here, we uncover an essential role of the hematopoietic-specific WRC component HEM1 for immune cell development. Germline-encoded HEM1 deficiency underlies an inborn error of immunity with systemic autoimmunity, at cellular level marked by WRC destabilization, reduced filamentous actin, and failure to assemble lamellipodia. Hem1−/− mice display systemic autoimmunity, phenocopying the human disease. In the absence of Hem1, B cells become deprived of extracellular stimuli necessary to maintain the strength of B cell receptor signaling at a level permissive for survival of non-autoreactive B cells. This shifts the balance of B cell fate choices toward autoreactive B cells and thus autoimmunity.","lang":"eng"}],"pmid":1,"status":"public","month":"07","publication":"Science Immunology","issue":"49","oa":1,"isi":1,"type":"journal_article","article_number":"eabc3979","date_published":"2020-07-10T00:00:00Z","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","year":"2020","article_processing_charge":"No","publication_status":"published","citation":{"short":"E. Salzer, S. Zoghi, M.G. Kiss, F. Kage, C. Rashkova, S. Stahnke, M. Haimel, R. Platzer, M. Caldera, R.C. Ardy, B. Hoeger, J. Block, D. Medgyesi, C. Sin, S. Shahkarami, R. Kain, V. Ziaee, P. Hammerl, C. Bock, J. Menche, L. Dupré, J.B. Huppa, M.K. Sixt, A. Lomakin, K. Rottner, C.J. Binder, T.E.B. Stradal, N. Rezaei, K. Boztug, Science Immunology 5 (2020).","chicago":"Salzer, Elisabeth, Samaneh Zoghi, Máté G. Kiss, Frieda Kage, Christina Rashkova, Stephanie Stahnke, Matthias Haimel, et al. “The Cytoskeletal Regulator HEM1 Governs B Cell Development and Prevents Autoimmunity.” <i>Science Immunology</i>. AAAS, 2020. <a href=\"https://doi.org/10.1126/sciimmunol.abc3979\">https://doi.org/10.1126/sciimmunol.abc3979</a>.","ama":"Salzer E, Zoghi S, Kiss MG, et al. The cytoskeletal regulator HEM1 governs B cell development and prevents autoimmunity. <i>Science Immunology</i>. 2020;5(49). doi:<a href=\"https://doi.org/10.1126/sciimmunol.abc3979\">10.1126/sciimmunol.abc3979</a>","apa":"Salzer, E., Zoghi, S., Kiss, M. G., Kage, F., Rashkova, C., Stahnke, S., … Boztug, K. (2020). The cytoskeletal regulator HEM1 governs B cell development and prevents autoimmunity. <i>Science Immunology</i>. AAAS. <a href=\"https://doi.org/10.1126/sciimmunol.abc3979\">https://doi.org/10.1126/sciimmunol.abc3979</a>","ista":"Salzer E, Zoghi S, Kiss MG, Kage F, Rashkova C, Stahnke S, Haimel M, Platzer R, Caldera M, Ardy RC, Hoeger B, Block J, Medgyesi D, Sin C, Shahkarami S, Kain R, Ziaee V, Hammerl P, Bock C, Menche J, Dupré L, Huppa JB, Sixt MK, Lomakin A, Rottner K, Binder CJ, Stradal TEB, Rezaei N, Boztug K. 2020. The cytoskeletal regulator HEM1 governs B cell development and prevents autoimmunity. Science Immunology. 5(49), eabc3979.","ieee":"E. Salzer <i>et al.</i>, “The cytoskeletal regulator HEM1 governs B cell development and prevents autoimmunity,” <i>Science Immunology</i>, vol. 5, no. 49. AAAS, 2020.","mla":"Salzer, Elisabeth, et al. “The Cytoskeletal Regulator HEM1 Governs B Cell Development and Prevents Autoimmunity.” <i>Science Immunology</i>, vol. 5, no. 49, eabc3979, AAAS, 2020, doi:<a href=\"https://doi.org/10.1126/sciimmunol.abc3979\">10.1126/sciimmunol.abc3979</a>."},"doi":"10.1126/sciimmunol.abc3979","volume":5,"scopus_import":"1","department":[{"_id":"MiSi"}],"main_file_link":[{"open_access":"1","url":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7116756"}],"oa_version":"Submitted Version","quality_controlled":"1","_id":"8132","external_id":{"pmid":["32646852"],"isi":["000546994600004"]},"OA_place":"repository","article_type":"original","publication_identifier":{"eissn":["2470-9468"]},"day":"10","date_updated":"2026-04-03T09:25:04Z","title":"The cytoskeletal regulator HEM1 governs B cell development and prevents autoimmunity","author":[{"first_name":"Elisabeth","last_name":"Salzer","full_name":"Salzer, Elisabeth"},{"first_name":"Samaneh","last_name":"Zoghi","full_name":"Zoghi, Samaneh"},{"full_name":"Kiss, Máté G.","first_name":"Máté G.","last_name":"Kiss"},{"full_name":"Kage, Frieda","last_name":"Kage","first_name":"Frieda"},{"last_name":"Rashkova","first_name":"Christina","full_name":"Rashkova, Christina"},{"full_name":"Stahnke, Stephanie","first_name":"Stephanie","last_name":"Stahnke"},{"last_name":"Haimel","first_name":"Matthias","full_name":"Haimel, Matthias"},{"full_name":"Platzer, René","last_name":"Platzer","first_name":"René"},{"last_name":"Caldera","first_name":"Michael","full_name":"Caldera, Michael"},{"full_name":"Ardy, Rico Chandra","last_name":"Ardy","first_name":"Rico Chandra"},{"last_name":"Hoeger","first_name":"Birgit","full_name":"Hoeger, Birgit"},{"last_name":"Block","first_name":"Jana","full_name":"Block, Jana"},{"full_name":"Medgyesi, David","last_name":"Medgyesi","first_name":"David"},{"full_name":"Sin, Celine","first_name":"Celine","last_name":"Sin"},{"first_name":"Sepideh","last_name":"Shahkarami","full_name":"Shahkarami, Sepideh"},{"first_name":"Renate","last_name":"Kain","full_name":"Kain, Renate"},{"full_name":"Ziaee, Vahid","last_name":"Ziaee","first_name":"Vahid"},{"full_name":"Hammerl, Peter","last_name":"Hammerl","first_name":"Peter"},{"first_name":"Christoph","last_name":"Bock","full_name":"Bock, Christoph"},{"last_name":"Menche","first_name":"Jörg","full_name":"Menche, Jörg"},{"full_name":"Dupré, Loïc","last_name":"Dupré","first_name":"Loïc"},{"first_name":"Johannes B.","last_name":"Huppa","full_name":"Huppa, Johannes B."},{"full_name":"Sixt, Michael K","id":"41E9FBEA-F248-11E8-B48F-1D18A9856A87","last_name":"Sixt","orcid":"0000-0002-6620-9179","first_name":"Michael K"},{"full_name":"Lomakin, Alexis","last_name":"Lomakin","first_name":"Alexis"},{"full_name":"Rottner, Klemens","last_name":"Rottner","first_name":"Klemens"},{"first_name":"Christoph J.","last_name":"Binder","full_name":"Binder, Christoph J."},{"first_name":"Theresia E.B.","last_name":"Stradal","full_name":"Stradal, Theresia E.B."},{"first_name":"Nima","last_name":"Rezaei","full_name":"Rezaei, Nima"},{"last_name":"Boztug","first_name":"Kaan","full_name":"Boztug, Kaan"}]},{"language":[{"iso":"eng"}],"intvolume":"        12","abstract":[{"text":"The molecular factors which control circulating levels of inflammatory proteins are not well understood. Furthermore, association studies between molecular probes and human traits are often performed by linear model-based methods which may fail to account for complex structure and interrelationships within molecular datasets.In this study, we perform genome- and epigenome-wide association studies (GWAS/EWAS) on the levels of 70 plasma-derived inflammatory protein biomarkers in healthy older adults (Lothian Birth Cohort 1936; n = 876; Olink® inflammation panel). We employ a Bayesian framework (BayesR+) which can account for issues pertaining to data structure and unknown confounding variables (with sensitivity analyses using ordinary least squares- (OLS) and mixed model-based approaches). We identified 13 SNPs associated with 13 proteins (n = 1 SNP each) concordant across OLS and Bayesian methods. We identified 3 CpG sites spread across 3 proteins (n = 1 CpG each) that were concordant across OLS, mixed-model and Bayesian analyses. Tagged genetic variants accounted for up to 45% of variance in protein levels (for MCP2, 36% of variance alone attributable to 1 polymorphism). Methylation data accounted for up to 46% of variation in protein levels (for CXCL10). Up to 66% of variation in protein levels (for VEGFA) was explained using genetic and epigenetic data combined. We demonstrated putative causal relationships between CD6 and IL18R1 with inflammatory bowel disease and between IL12B and Crohn’s disease. Our data may aid understanding of the molecular regulation of the circulating inflammatory proteome as well as causal relationships between inflammatory mediators and disease.","lang":"eng"}],"pmid":1,"date_created":"2020-07-19T22:00:58Z","has_accepted_license":"1","publisher":"Springer Nature","publication":"Genome Medicine","status":"public","month":"07","corr_author":"1","ddc":["570"],"issue":"1","isi":1,"type":"journal_article","oa":1,"user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","article_number":"60","date_published":"2020-07-08T00:00:00Z","year":"2020","article_processing_charge":"No","publication_status":"published","file":[{"file_size":1136983,"access_level":"open_access","content_type":"application/pdf","date_created":"2020-07-22T06:27:38Z","relation":"main_file","file_name":"2020_GenomeMedicine_Hillary.pdf","creator":"dernst","date_updated":"2020-07-22T06:27:38Z","file_id":"8145","success":1}],"doi":"10.1186/s13073-020-00754-1","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"citation":{"apa":"Hillary, R. F., Trejo-Banos, D., Kousathanas, A., Mccartney, D. L., Harris, S. E., Stevenson, A. J., … Marioni, R. E. (2020). Multi-method genome- and epigenome-wide studies of inflammatory protein levels in healthy older adults. <i>Genome Medicine</i>. Springer Nature. <a href=\"https://doi.org/10.1186/s13073-020-00754-1\">https://doi.org/10.1186/s13073-020-00754-1</a>","ista":"Hillary RF, Trejo-Banos D, Kousathanas A, Mccartney DL, Harris SE, Stevenson AJ, Patxot M, Ojavee SE, Zhang Q, Liewald DC, Ritchie CW, Evans KL, Tucker-Drob EM, Wray NR, Mcrae AF, Visscher PM, Deary IJ, Robinson MR, Marioni RE. 2020. Multi-method genome- and epigenome-wide studies of inflammatory protein levels in healthy older adults. Genome Medicine. 12(1), 60.","ama":"Hillary RF, Trejo-Banos D, Kousathanas A, et al. Multi-method genome- and epigenome-wide studies of inflammatory protein levels in healthy older adults. <i>Genome Medicine</i>. 2020;12(1). doi:<a href=\"https://doi.org/10.1186/s13073-020-00754-1\">10.1186/s13073-020-00754-1</a>","mla":"Hillary, Robert F., et al. “Multi-Method Genome- and Epigenome-Wide Studies of Inflammatory Protein Levels in Healthy Older Adults.” <i>Genome Medicine</i>, vol. 12, no. 1, 60, Springer Nature, 2020, doi:<a href=\"https://doi.org/10.1186/s13073-020-00754-1\">10.1186/s13073-020-00754-1</a>.","ieee":"R. F. Hillary <i>et al.</i>, “Multi-method genome- and epigenome-wide studies of inflammatory protein levels in healthy older adults,” <i>Genome Medicine</i>, vol. 12, no. 1. Springer Nature, 2020.","short":"R.F. Hillary, D. Trejo-Banos, A. Kousathanas, D.L. Mccartney, S.E. Harris, A.J. Stevenson, M. Patxot, S.E. Ojavee, Q. Zhang, D.C. Liewald, C.W. Ritchie, K.L. Evans, E.M. Tucker-Drob, N.R. Wray, A.F. Mcrae, P.M. Visscher, I.J. Deary, M.R. Robinson, R.E. Marioni, Genome Medicine 12 (2020).","chicago":"Hillary, Robert F., Daniel Trejo-Banos, Athanasios Kousathanas, Daniel L. Mccartney, Sarah E. Harris, Anna J. Stevenson, Marion Patxot, et al. “Multi-Method Genome- and Epigenome-Wide Studies of Inflammatory Protein Levels in Healthy Older Adults.” <i>Genome Medicine</i>. Springer Nature, 2020. <a href=\"https://doi.org/10.1186/s13073-020-00754-1\">https://doi.org/10.1186/s13073-020-00754-1</a>."},"scopus_import":"1","department":[{"_id":"MaRo"}],"volume":12,"_id":"8133","oa_version":"Published Version","quality_controlled":"1","external_id":{"isi":["000551778400001"],"pmid":["32641083"]},"article_type":"original","file_date_updated":"2020-07-22T06:27:38Z","publication_identifier":{"eissn":["1756-994X"]},"related_material":{"record":[{"status":"public","relation":"research_data","id":"9706"}]},"day":"08","date_updated":"2026-04-02T14:28:33Z","title":"Multi-method genome- and epigenome-wide studies of inflammatory protein levels in healthy older adults","author":[{"full_name":"Hillary, Robert F.","last_name":"Hillary","first_name":"Robert F."},{"full_name":"Trejo-Banos, Daniel","last_name":"Trejo-Banos","first_name":"Daniel"},{"last_name":"Kousathanas","first_name":"Athanasios","full_name":"Kousathanas, Athanasios"},{"last_name":"Mccartney","first_name":"Daniel L.","full_name":"Mccartney, Daniel L."},{"full_name":"Harris, Sarah E.","last_name":"Harris","first_name":"Sarah E."},{"full_name":"Stevenson, Anna J.","last_name":"Stevenson","first_name":"Anna J."},{"last_name":"Patxot","first_name":"Marion","full_name":"Patxot, Marion"},{"full_name":"Ojavee, Sven Erik","first_name":"Sven Erik","last_name":"Ojavee"},{"first_name":"Qian","last_name":"Zhang","full_name":"Zhang, Qian"},{"last_name":"Liewald","first_name":"David C.","full_name":"Liewald, David C."},{"last_name":"Ritchie","first_name":"Craig W.","full_name":"Ritchie, Craig W."},{"full_name":"Evans, Kathryn L.","first_name":"Kathryn L.","last_name":"Evans"},{"first_name":"Elliot M.","last_name":"Tucker-Drob","full_name":"Tucker-Drob, Elliot M."},{"full_name":"Wray, Naomi R.","first_name":"Naomi R.","last_name":"Wray"},{"full_name":"Mcrae, Allan F.","last_name":"Mcrae","first_name":"Allan F."},{"first_name":"Peter M.","last_name":"Visscher","full_name":"Visscher, Peter M."},{"full_name":"Deary, Ian J.","last_name":"Deary","first_name":"Ian J."},{"id":"E5D42276-F5DA-11E9-8E24-6303E6697425","full_name":"Robinson, Matthew Richard","orcid":"0000-0001-8982-8813","last_name":"Robinson","first_name":"Matthew Richard"},{"full_name":"Marioni, Riccardo E.","first_name":"Riccardo E.","last_name":"Marioni"}]},{"citation":{"ama":"Mayer S, Seiringer R. The free energy of the two-dimensional dilute Bose gas. II. Upper bound. <i>Journal of Mathematical Physics</i>. 2020;61(6). doi:<a href=\"https://doi.org/10.1063/5.0005950\">10.1063/5.0005950</a>","apa":"Mayer, S., &#38; Seiringer, R. (2020). The free energy of the two-dimensional dilute Bose gas. II. Upper bound. <i>Journal of Mathematical Physics</i>. AIP Publishing. <a href=\"https://doi.org/10.1063/5.0005950\">https://doi.org/10.1063/5.0005950</a>","ista":"Mayer S, Seiringer R. 2020. The free energy of the two-dimensional dilute Bose gas. II. Upper bound. Journal of Mathematical Physics. 61(6), 061901.","mla":"Mayer, Simon, and Robert Seiringer. “The Free Energy of the Two-Dimensional Dilute Bose Gas. II. Upper Bound.” <i>Journal of Mathematical Physics</i>, vol. 61, no. 6, 061901, AIP Publishing, 2020, doi:<a href=\"https://doi.org/10.1063/5.0005950\">10.1063/5.0005950</a>.","ieee":"S. Mayer and R. Seiringer, “The free energy of the two-dimensional dilute Bose gas. II. Upper bound,” <i>Journal of Mathematical Physics</i>, vol. 61, no. 6. AIP Publishing, 2020.","short":"S. Mayer, R. Seiringer, Journal of Mathematical Physics 61 (2020).","chicago":"Mayer, Simon, and Robert Seiringer. “The Free Energy of the Two-Dimensional Dilute Bose Gas. II. Upper Bound.” <i>Journal of Mathematical Physics</i>. AIP Publishing, 2020. <a href=\"https://doi.org/10.1063/5.0005950\">https://doi.org/10.1063/5.0005950</a>."},"doi":"10.1063/5.0005950","project":[{"call_identifier":"H2020","_id":"25C6DC12-B435-11E9-9278-68D0E5697425","name":"Analysis of quantum many-body systems","grant_number":"694227"}],"volume":61,"scopus_import":"1","department":[{"_id":"RoSe"}],"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/2002.08281"}],"quality_controlled":"1","oa_version":"Preprint","_id":"8134","external_id":{"arxiv":["2002.08281"],"isi":["000544595100001"]},"arxiv":1,"publication_identifier":{"issn":["0022-2488"]},"article_type":"original","day":"22","date_updated":"2025-07-10T11:55:05Z","title":"The free energy of the two-dimensional dilute Bose gas. II. Upper bound","author":[{"full_name":"Mayer, Simon","id":"30C4630A-F248-11E8-B48F-1D18A9856A87","first_name":"Simon","last_name":"Mayer"},{"last_name":"Seiringer","orcid":"0000-0002-6781-0521","first_name":"Robert","full_name":"Seiringer, Robert","id":"4AFD0470-F248-11E8-B48F-1D18A9856A87"}],"intvolume":"        61","language":[{"iso":"eng"}],"publisher":"AIP Publishing","date_created":"2020-07-19T22:00:59Z","abstract":[{"text":"We prove an upper bound on the free energy of a two-dimensional homogeneous Bose gas in the thermodynamic limit. We show that for a2ρ ≪ 1 and βρ ≳ 1, the free energy per unit volume differs from the one of the non-interacting system by at most 4πρ2|lna2ρ|−1(2−[1−βc/β]2+) to leading order, where a is the scattering length of the two-body interaction potential, ρ is the density, β is the inverse temperature, and βc is the inverse Berezinskii–Kosterlitz–Thouless critical temperature for superfluidity. In combination with the corresponding matching lower bound proved by Deuchert et al. [Forum Math. Sigma 8, e20 (2020)], this shows equality in the asymptotic expansion.","lang":"eng"}],"month":"06","corr_author":"1","publication":"Journal of Mathematical Physics","status":"public","issue":"6","oa":1,"ec_funded":1,"isi":1,"type":"journal_article","date_published":"2020-06-22T00:00:00Z","article_number":"061901","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"No","year":"2020","publication_status":"published"},{"file":[{"access_level":"open_access","content_type":"application/pdf","file_size":2207071,"checksum":"7b5e0de10675d787a2ddb2091370b8d8","file_name":"2020-B-01-PoissonExperimentalSurvey.pdf","creator":"dernst","date_created":"2020-10-08T08:56:14Z","relation":"main_file","date_updated":"2020-10-08T08:56:14Z","success":1,"file_id":"8628"}],"publication_status":"published","article_processing_charge":"No","year":"2020","date_published":"2020-06-22T00:00:00Z","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","page":"181-218","oa":1,"type":"conference","ec_funded":1,"isi":1,"month":"06","publication":"Topological Data Analysis","ddc":["510"],"status":"public","publisher":"Springer Nature","date_created":"2020-07-19T22:00:59Z","has_accepted_license":"1","abstract":[{"text":"Discrete Morse theory has recently lead to new developments in the theory of random geometric complexes. This article surveys the methods and results obtained with this new approach, and discusses some of its shortcomings. It uses simulations to illustrate the results and to form conjectures, getting numerical estimates for combinatorial, topological, and geometric properties of weighted and unweighted Delaunay mosaics, their dual Voronoi tessellations, and the Alpha and Wrap complexes contained in the mosaics.","lang":"eng"}],"alternative_title":["Abel Symposia"],"intvolume":"        15","language":[{"iso":"eng"}],"author":[{"first_name":"Herbert","orcid":"0000-0002-9823-6833","last_name":"Edelsbrunner","id":"3FB178DA-F248-11E8-B48F-1D18A9856A87","full_name":"Edelsbrunner, Herbert"},{"id":"3E4FF1BA-F248-11E8-B48F-1D18A9856A87","full_name":"Nikitenko, Anton","orcid":"0000-0002-0659-3201","last_name":"Nikitenko","first_name":"Anton"},{"orcid":"0000-0002-4672-8297","last_name":"Ölsböck","first_name":"Katharina","id":"4D4AA390-F248-11E8-B48F-1D18A9856A87","full_name":"Ölsböck, Katharina"},{"first_name":"Peter","last_name":"Synak","id":"331776E2-F248-11E8-B48F-1D18A9856A87","full_name":"Synak, Peter"}],"title":"Radius functions on Poisson–Delaunay mosaics and related complexes experimentally","date_updated":"2026-04-07T12:35:47Z","day":"22","acknowledgement":"This project has received funding from the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (grant agreements No 78818 Alpha and No 638176). It is also partially supported by the DFG Collaborative Research Center TRR 109, ‘Discretization in Geometry and Dynamics’, through grant no. I02979-N35 of the Austrian Science Fund (FWF).","related_material":{"record":[{"status":"public","relation":"dissertation_contains","id":"19630"}]},"file_date_updated":"2020-10-08T08:56:14Z","publication_identifier":{"issn":["2193-2808"],"isbn":["9783030434076"],"eissn":["2197-8549"]},"external_id":{"isi":["001321861000008"]},"quality_controlled":"1","oa_version":"Submitted Version","_id":"8135","volume":15,"scopus_import":"1","department":[{"_id":"HeEd"}],"doi":"10.1007/978-3-030-43408-3_8","citation":{"mla":"Edelsbrunner, Herbert, et al. “Radius Functions on Poisson–Delaunay Mosaics and Related Complexes Experimentally.” <i>Topological Data Analysis</i>, vol. 15, Springer Nature, 2020, pp. 181–218, doi:<a href=\"https://doi.org/10.1007/978-3-030-43408-3_8\">10.1007/978-3-030-43408-3_8</a>.","ieee":"H. Edelsbrunner, A. Nikitenko, K. Ölsböck, and P. Synak, “Radius functions on Poisson–Delaunay mosaics and related complexes experimentally,” in <i>Topological Data Analysis</i>, 2020, vol. 15, pp. 181–218.","ista":"Edelsbrunner H, Nikitenko A, Ölsböck K, Synak P. 2020. Radius functions on Poisson–Delaunay mosaics and related complexes experimentally. Topological Data Analysis. , Abel Symposia, vol. 15, 181–218.","ama":"Edelsbrunner H, Nikitenko A, Ölsböck K, Synak P. Radius functions on Poisson–Delaunay mosaics and related complexes experimentally. In: <i>Topological Data Analysis</i>. Vol 15. Springer Nature; 2020:181-218. doi:<a href=\"https://doi.org/10.1007/978-3-030-43408-3_8\">10.1007/978-3-030-43408-3_8</a>","apa":"Edelsbrunner, H., Nikitenko, A., Ölsböck, K., &#38; Synak, P. (2020). Radius functions on Poisson–Delaunay mosaics and related complexes experimentally. In <i>Topological Data Analysis</i> (Vol. 15, pp. 181–218). Springer Nature. <a href=\"https://doi.org/10.1007/978-3-030-43408-3_8\">https://doi.org/10.1007/978-3-030-43408-3_8</a>","chicago":"Edelsbrunner, Herbert, Anton Nikitenko, Katharina Ölsböck, and Peter Synak. “Radius Functions on Poisson–Delaunay Mosaics and Related Complexes Experimentally.” In <i>Topological Data Analysis</i>, 15:181–218. Springer Nature, 2020. <a href=\"https://doi.org/10.1007/978-3-030-43408-3_8\">https://doi.org/10.1007/978-3-030-43408-3_8</a>.","short":"H. Edelsbrunner, A. Nikitenko, K. Ölsböck, P. Synak, in:, Topological Data Analysis, Springer Nature, 2020, pp. 181–218."},"project":[{"name":"Alpha Shape Theory Extended","grant_number":"788183","call_identifier":"H2020","_id":"266A2E9E-B435-11E9-9278-68D0E5697425"},{"call_identifier":"H2020","_id":"2533E772-B435-11E9-9278-68D0E5697425","name":"Big Splash: Efficient Simulation of Natural Phenomena at Extremely Large Scales","grant_number":"638176"},{"name":"Persistence and stability of geometric complexes","grant_number":"I02979-N35","call_identifier":"FWF","_id":"2561EBF4-B435-11E9-9278-68D0E5697425"}]},{"publisher":"Springer Nature","has_accepted_license":"1","abstract":[{"text":"Directional transport of the phytohormone auxin is a versatile, plant-specific mechanism regulating many aspects of plant development. The recently identified plant hormones, strigolactones (SLs), are implicated in many plant traits; among others, they modify the phenotypic output of PIN-FORMED (PIN) auxin transporters for fine-tuning of growth and developmental responses. Here, we show in pea and Arabidopsis that SLs target processes dependent on the canalization of auxin flow, which involves auxin feedback on PIN subcellular distribution. D14 receptor- and MAX2 F-box-mediated SL signaling inhibits the formation of auxin-conducting channels after wounding or from artificial auxin sources, during vasculature de novo formation and regeneration. At the cellular level, SLs interfere with auxin effects on PIN polar targeting, constitutive PIN trafficking as well as clathrin-mediated endocytosis. Our results identify a non-transcriptional mechanism of SL action, uncoupling auxin feedback on PIN polarity and trafficking, thereby regulating vascular tissue formation and regeneration.","lang":"eng"}],"pmid":1,"date_created":"2020-07-21T08:58:07Z","intvolume":"        11","language":[{"iso":"eng"}],"issue":"1","status":"public","publication":"Nature Communications","ddc":["580"],"month":"07","corr_author":"1","page":"3508","oa":1,"type":"journal_article","isi":1,"ec_funded":1,"file":[{"content_type":"application/pdf","access_level":"open_access","file_size":1759490,"creator":"dernst","file_name":"2020_NatureComm_Zhang.pdf","relation":"main_file","date_created":"2020-07-22T08:32:55Z","date_updated":"2020-07-22T08:32:55Z","file_id":"8148","success":1}],"year":"2020","article_processing_charge":"No","publication_status":"published","date_published":"2020-07-14T00:00:00Z","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","volume":11,"department":[{"_id":"JiFr"}],"scopus_import":"1","citation":{"chicago":"Zhang, J, E Mazur, J Balla, Michelle C Gallei, P Kalousek, Z Medveďová, Y Li, et al. “Strigolactones Inhibit Auxin Feedback on PIN-Dependent Auxin Transport Canalization.” <i>Nature Communications</i>. Springer Nature, 2020. <a href=\"https://doi.org/10.1038/s41467-020-17252-y\">https://doi.org/10.1038/s41467-020-17252-y</a>.","short":"J. Zhang, E. Mazur, J. Balla, M.C. Gallei, P. Kalousek, Z. Medveďová, Y. Li, Y. Wang, T. Prat, M.K. Vasileva, V. Reinöhl, S. Procházka, R. Halouzka, P. Tarkowski, C. Luschnig, P. Brewer, J. Friml, Nature Communications 11 (2020) 3508.","mla":"Zhang, J., et al. “Strigolactones Inhibit Auxin Feedback on PIN-Dependent Auxin Transport Canalization.” <i>Nature Communications</i>, vol. 11, no. 1, Springer Nature, 2020, p. 3508, doi:<a href=\"https://doi.org/10.1038/s41467-020-17252-y\">10.1038/s41467-020-17252-y</a>.","ieee":"J. Zhang <i>et al.</i>, “Strigolactones inhibit auxin feedback on PIN-dependent auxin transport canalization,” <i>Nature Communications</i>, vol. 11, no. 1. Springer Nature, p. 3508, 2020.","apa":"Zhang, J., Mazur, E., Balla, J., Gallei, M. C., Kalousek, P., Medveďová, Z., … Friml, J. (2020). Strigolactones inhibit auxin feedback on PIN-dependent auxin transport canalization. <i>Nature Communications</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41467-020-17252-y\">https://doi.org/10.1038/s41467-020-17252-y</a>","ista":"Zhang J, Mazur E, Balla J, Gallei MC, Kalousek P, Medveďová Z, Li Y, Wang Y, Prat T, Vasileva MK, Reinöhl V, Procházka S, Halouzka R, Tarkowski P, Luschnig C, Brewer P, Friml J. 2020. Strigolactones inhibit auxin feedback on PIN-dependent auxin transport canalization. Nature Communications. 11(1), 3508.","ama":"Zhang J, Mazur E, Balla J, et al. Strigolactones inhibit auxin feedback on PIN-dependent auxin transport canalization. <i>Nature Communications</i>. 2020;11(1):3508. doi:<a href=\"https://doi.org/10.1038/s41467-020-17252-y\">10.1038/s41467-020-17252-y</a>"},"tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"doi":"10.1038/s41467-020-17252-y","project":[{"_id":"261099A6-B435-11E9-9278-68D0E5697425","call_identifier":"H2020","grant_number":"742985","name":"Tracing Evolution of Auxin Transport and Polarity in Plants"}],"quality_controlled":"1","oa_version":"Published Version","_id":"8138","file_date_updated":"2020-07-22T08:32:55Z","related_material":{"record":[{"status":"public","relation":"dissertation_contains","id":"11626"}]},"acknowledgement":"We are grateful to David Nelson for providing published materials and extremely helpful comments, and Elizabeth Dun and Christine Beveridge for helpful discussions. The research leading to these results has received funding from the European Research Council (ERC) under the European Union's Horizon 2020 research and innovation programme (742985). This work was also supported by the Beijing Municipal Natural Science Foundation (5192011), Beijing Outstanding University Discipline Program, the National Natural Science Foundation of China (31370309), CEITEC 2020 (LQ1601) project with financial contribution made by the Ministry of Education, Youth and Sports of the Czech Republic within special support paid from the National Program of Sustainability II funds, Australian Research Council (FT180100081), and China Postdoctoral Science Foundation (2019M660864).","publication_identifier":{"issn":["2041-1723"]},"article_type":"original","day":"14","external_id":{"isi":["000550062200004"],"pmid":["32665554"]},"author":[{"full_name":"Zhang, J","last_name":"Zhang","first_name":"J"},{"first_name":"E","last_name":"Mazur","full_name":"Mazur, E"},{"last_name":"Balla","first_name":"J","full_name":"Balla, J"},{"last_name":"Gallei","orcid":"0000-0003-1286-7368","first_name":"Michelle C","full_name":"Gallei, Michelle C","id":"35A03822-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Kalousek, P","first_name":"P","last_name":"Kalousek"},{"first_name":"Z","last_name":"Medveďová","full_name":"Medveďová, Z"},{"first_name":"Y","last_name":"Li","full_name":"Li, Y"},{"first_name":"Y","last_name":"Wang","full_name":"Wang, Y"},{"first_name":"Tomas","last_name":"Prat","full_name":"Prat, Tomas","id":"3DA3BFEE-F248-11E8-B48F-1D18A9856A87"},{"id":"3407EB18-F248-11E8-B48F-1D18A9856A87","full_name":"Vasileva, Mina K","last_name":"Vasileva","first_name":"Mina K"},{"last_name":"Reinöhl","first_name":"V","full_name":"Reinöhl, V"},{"first_name":"S","last_name":"Procházka","full_name":"Procházka, S"},{"first_name":"R","last_name":"Halouzka","full_name":"Halouzka, R"},{"full_name":"Tarkowski, P","last_name":"Tarkowski","first_name":"P"},{"first_name":"C","last_name":"Luschnig","full_name":"Luschnig, C"},{"full_name":"Brewer, PB","last_name":"Brewer","first_name":"PB"},{"full_name":"Friml, Jiří","id":"4159519E-F248-11E8-B48F-1D18A9856A87","first_name":"Jiří","last_name":"Friml","orcid":"0000-0002-8302-7596"}],"date_updated":"2026-04-07T14:18:57Z","title":"Strigolactones inhibit auxin feedback on PIN-dependent auxin transport canalization"},{"external_id":{"isi":["000548311800001"],"pmid":["32667089"]},"article_type":"original","file_date_updated":"2020-12-02T09:13:23Z","publication_identifier":{"issn":["0261-4189"],"eissn":["1460-2075"]},"acknowledgement":"We thank Takashi Aoyama, David Alabadi, and Bert De Rybel for sharing material, Jiří Friml, Maciek Adamowski, and Katerina Schwarzerová for inspiring discussions, and Martine De Cock for help in preparing the manuscript. This research was supported by the Scientific Service Units (SSUs) of IST Austria through resources provided by the Bioimaging Facility (BIF), especially to Robert Hauschild; and the Life Science Facility (LSF). J.C.M. is the recipient of a EMBO Long‐Term Fellowship (ALTF number 710‐2016). This work was supported with MEYS CR, project no.CZ.02.1.01/0.0/0.0/16_019/0000738 to J.P., and by the Austrian Science Fund (FWF01_I1774S) to E.B.","day":"01","date_updated":"2025-04-15T06:37:27Z","title":"Phytohormone cytokinin guides microtubule dynamics during cell progression from proliferative to differentiated stage","author":[{"id":"310A8E3E-F248-11E8-B48F-1D18A9856A87","full_name":"Montesinos López, Juan C","first_name":"Juan C","orcid":"0000-0001-9179-6099","last_name":"Montesinos López"},{"full_name":"Abuzeineh, A","first_name":"A","last_name":"Abuzeineh"},{"full_name":"Kopf, Aglaja","id":"31DAC7B6-F248-11E8-B48F-1D18A9856A87","first_name":"Aglaja","last_name":"Kopf","orcid":"0000-0002-2187-6656"},{"id":"40F05888-F248-11E8-B48F-1D18A9856A87","full_name":"Juanes Garcia, Alba","orcid":"0000-0002-1009-9652","last_name":"Juanes Garcia","first_name":"Alba"},{"last_name":"Ötvös","orcid":"0000-0002-5503-4983","first_name":"Krisztina","full_name":"Ötvös, Krisztina","id":"29B901B0-F248-11E8-B48F-1D18A9856A87"},{"first_name":"J","last_name":"Petrášek","full_name":"Petrášek, J"},{"orcid":"0000-0002-6620-9179","last_name":"Sixt","first_name":"Michael K","id":"41E9FBEA-F248-11E8-B48F-1D18A9856A87","full_name":"Sixt, Michael K"},{"first_name":"Eva","orcid":"0000-0002-8510-9739","last_name":"Benková","id":"38F4F166-F248-11E8-B48F-1D18A9856A87","full_name":"Benková, Eva"}],"project":[{"grant_number":"ALTF710-2016","name":"Molecular mechanism of auxindriven formative divisions delineating lateral root organogenesis in plants","_id":"253E54C8-B435-11E9-9278-68D0E5697425"},{"name":"Hormone cross-talk drives nutrient dependent plant development","grant_number":"I 1774-B16","call_identifier":"FWF","_id":"2542D156-B435-11E9-9278-68D0E5697425"}],"citation":{"ieee":"J. C. Montesinos López <i>et al.</i>, “Phytohormone cytokinin guides microtubule dynamics during cell progression from proliferative to differentiated stage,” <i>The Embo Journal</i>, vol. 39, no. 17. Embo Press, 2020.","mla":"Montesinos López, Juan C., et al. “Phytohormone Cytokinin Guides Microtubule Dynamics during Cell Progression from Proliferative to Differentiated Stage.” <i>The Embo Journal</i>, vol. 39, no. 17, e104238, Embo Press, 2020, doi:<a href=\"https://doi.org/10.15252/embj.2019104238\">10.15252/embj.2019104238</a>.","apa":"Montesinos López, J. C., Abuzeineh, A., Kopf, A., Juanes Garcia, A., Ötvös, K., Petrášek, J., … Benková, E. (2020). Phytohormone cytokinin guides microtubule dynamics during cell progression from proliferative to differentiated stage. <i>The Embo Journal</i>. Embo Press. <a href=\"https://doi.org/10.15252/embj.2019104238\">https://doi.org/10.15252/embj.2019104238</a>","ista":"Montesinos López JC, Abuzeineh A, Kopf A, Juanes Garcia A, Ötvös K, Petrášek J, Sixt MK, Benková E. 2020. Phytohormone cytokinin guides microtubule dynamics during cell progression from proliferative to differentiated stage. The Embo Journal. 39(17), e104238.","ama":"Montesinos López JC, Abuzeineh A, Kopf A, et al. Phytohormone cytokinin guides microtubule dynamics during cell progression from proliferative to differentiated stage. <i>The Embo Journal</i>. 2020;39(17). doi:<a href=\"https://doi.org/10.15252/embj.2019104238\">10.15252/embj.2019104238</a>","chicago":"Montesinos López, Juan C, A Abuzeineh, Aglaja Kopf, Alba Juanes Garcia, Krisztina Ötvös, J Petrášek, Michael K Sixt, and Eva Benková. “Phytohormone Cytokinin Guides Microtubule Dynamics during Cell Progression from Proliferative to Differentiated Stage.” <i>The Embo Journal</i>. Embo Press, 2020. <a href=\"https://doi.org/10.15252/embj.2019104238\">https://doi.org/10.15252/embj.2019104238</a>.","short":"J.C. Montesinos López, A. Abuzeineh, A. Kopf, A. Juanes Garcia, K. Ötvös, J. Petrášek, M.K. Sixt, E. Benková, The Embo Journal 39 (2020)."},"tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"doi":"10.15252/embj.2019104238","scopus_import":"1","department":[{"_id":"MiSi"},{"_id":"EvBe"}],"volume":39,"_id":"8142","quality_controlled":"1","oa_version":"Published Version","type":"journal_article","isi":1,"oa":1,"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","date_published":"2020-09-01T00:00:00Z","article_number":"e104238","article_processing_charge":"Yes (via OA deal)","year":"2020","publication_status":"published","file":[{"date_updated":"2020-12-02T09:13:23Z","success":1,"file_id":"8827","file_size":3497156,"access_level":"open_access","content_type":"application/pdf","date_created":"2020-12-02T09:13:23Z","relation":"main_file","checksum":"43d2b36598708e6ab05c69074e191d57","file_name":"2020_EMBO_Montesinos.pdf","creator":"dernst"}],"language":[{"iso":"eng"}],"intvolume":"        39","pmid":1,"abstract":[{"lang":"eng","text":"Cell production and differentiation for the acquisition of specific functions are key features of living systems. The dynamic network of cellular microtubules provides the necessary platform to accommodate processes associated with the transition of cells through the individual phases of cytogenesis. Here, we show that the plant hormone cytokinin fine‐tunes the activity of the microtubular cytoskeleton during cell differentiation and counteracts microtubular rearrangements driven by the hormone auxin. The endogenous upward gradient of cytokinin activity along the longitudinal growth axis in Arabidopsis thaliana roots correlates with robust rearrangements of the microtubule cytoskeleton in epidermal cells progressing from the proliferative to the differentiation stage. Controlled increases in cytokinin activity result in premature re‐organization of the microtubule network from transversal to an oblique disposition in cells prior to their differentiation, whereas attenuated hormone perception delays cytoskeleton conversion into a configuration typical for differentiated cells. Intriguingly, cytokinin can interfere with microtubules also in animal cells, such as leukocytes, suggesting that a cytokinin‐sensitive control pathway for the microtubular cytoskeleton may be at least partially conserved between plant and animal cells."}],"date_created":"2020-07-21T09:08:38Z","has_accepted_license":"1","publisher":"Embo Press","acknowledged_ssus":[{"_id":"Bio"},{"_id":"LifeSc"}],"publication":"The Embo Journal","status":"public","ddc":["580"],"month":"09","corr_author":"1","issue":"17"},{"oa":1,"type":"dissertation","page":"119","date_published":"2020-07-24T00:00:00Z","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","file":[{"file_id":"8178","date_updated":"2020-07-27T12:44:51Z","relation":"source_file","date_created":"2020-07-27T12:44:51Z","file_name":"source.zip","creator":"savvakum","file_size":1061740,"content_type":"application/zip","access_level":"closed"},{"date_updated":"2020-07-27T12:46:53Z","file_id":"8179","success":1,"content_type":"application/pdf","access_level":"open_access","file_size":1336501,"file_name":"thesis_pdfa.pdf","creator":"savvakum","relation":"main_file","date_created":"2020-07-27T12:46:53Z"}],"article_processing_charge":"No","year":"2020","publication_status":"published","language":[{"iso":"eng"}],"supervisor":[{"orcid":"0000-0002-1494-0568","last_name":"Wagner","first_name":"Uli","id":"36690CA2-F248-11E8-B48F-1D18A9856A87","full_name":"Wagner, Uli"}],"publisher":"Institute of Science and Technology Austria","alternative_title":["ISTA Thesis"],"date_created":"2020-07-23T09:51:29Z","abstract":[{"text":"We present solutions to several problems originating from geometry and discrete mathematics: existence of equipartitions, maps without Tverberg multiple points, and inscribing quadrilaterals. Equivariant obstruction theory is the natural topological approach to these type of questions. However, for the specific problems we consider it had yielded only partial or no results. We get our results by complementing equivariant obstruction theory with other techniques from topology and geometry.","lang":"eng"}],"has_accepted_license":"1","corr_author":"1","ddc":["514"],"month":"07","status":"public","degree_awarded":"PhD","OA_place":"publisher","related_material":{"record":[{"id":"8182","relation":"part_of_dissertation","status":"public"},{"status":"public","relation":"part_of_dissertation","id":"8184"},{"id":"8185","relation":"part_of_dissertation","status":"public"},{"status":"public","id":"6355","relation":"part_of_dissertation"},{"status":"public","relation":"part_of_dissertation","id":"75"},{"id":"8183","relation":"part_of_dissertation","status":"public"}]},"publication_identifier":{"issn":["2663-337X"]},"file_date_updated":"2020-07-27T12:46:53Z","day":"24","date_updated":"2026-04-08T07:25:54Z","title":"Topological methods in geometry and discrete mathematics","author":[{"first_name":"Sergey","last_name":"Avvakumov","orcid":"0000-0002-7840-5062","full_name":"Avvakumov, Sergey","id":"3827DAC8-F248-11E8-B48F-1D18A9856A87"}],"citation":{"chicago":"Avvakumov, Sergey. “Topological Methods in Geometry and Discrete Mathematics.” Institute of Science and Technology Austria, 2020. <a href=\"https://doi.org/10.15479/AT:ISTA:8156\">https://doi.org/10.15479/AT:ISTA:8156</a>.","short":"S. Avvakumov, Topological Methods in Geometry and Discrete Mathematics, Institute of Science and Technology Austria, 2020.","ieee":"S. Avvakumov, “Topological methods in geometry and discrete mathematics,” Institute of Science and Technology Austria, 2020.","mla":"Avvakumov, Sergey. <i>Topological Methods in Geometry and Discrete Mathematics</i>. Institute of Science and Technology Austria, 2020, doi:<a href=\"https://doi.org/10.15479/AT:ISTA:8156\">10.15479/AT:ISTA:8156</a>.","ama":"Avvakumov S. Topological methods in geometry and discrete mathematics. 2020. doi:<a href=\"https://doi.org/10.15479/AT:ISTA:8156\">10.15479/AT:ISTA:8156</a>","ista":"Avvakumov S. 2020. Topological methods in geometry and discrete mathematics. Institute of Science and Technology Austria.","apa":"Avvakumov, S. (2020). <i>Topological methods in geometry and discrete mathematics</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT:ISTA:8156\">https://doi.org/10.15479/AT:ISTA:8156</a>"},"doi":"10.15479/AT:ISTA:8156","department":[{"_id":"UlWa"}],"oa_version":"Published Version","_id":"8156"},{"intvolume":"       107","language":[{"iso":"eng"}],"publisher":"Elsevier","abstract":[{"text":"In mammalian genomes, a subset of genes is regulated by genomic imprinting, resulting in silencing of one parental allele. Imprinting is essential for cerebral cortex development, but prevalence and functional impact in individual cells is unclear. Here, we determined allelic expression in cortical cell types and established a quantitative platform to interrogate imprinting in single cells. We created cells with uniparental chromosome disomy (UPD) containing two copies of either the maternal or the paternal chromosome; hence, imprinted genes will be 2-fold overexpressed or not expressed. By genetic labeling of UPD, we determined cellular phenotypes and transcriptional responses to deregulated imprinted gene expression at unprecedented single-cell resolution. We discovered an unexpected degree of cell-type specificity and a novel function of imprinting in the regulation of cortical astrocyte survival. More generally, our results suggest functional relevance of imprinted gene expression in glial astrocyte lineage and thus for generating cortical cell-type diversity.","lang":"eng"}],"date_created":"2020-07-23T16:03:12Z","pmid":1,"has_accepted_license":"1","acknowledged_ssus":[{"_id":"Bio"},{"_id":"LifeSc"},{"_id":"PreCl"}],"publication":"Neuron","corr_author":"1","month":"09","status":"public","ddc":["570"],"issue":"6","oa":1,"type":"journal_article","ec_funded":1,"isi":1,"page":"1160-1179.e9","date_published":"2020-09-23T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","file":[{"file_size":8911830,"content_type":"application/pdf","access_level":"open_access","relation":"main_file","date_created":"2020-12-02T09:26:46Z","checksum":"7becdc16a6317304304631087ae7dd7f","creator":"dernst","file_name":"2020_Neuron_Laukoter.pdf","date_updated":"2020-12-02T09:26:46Z","file_id":"8828","success":1}],"year":"2020","article_processing_charge":"No","publication_status":"published","tmp":{"image":"/images/cc_by_nc_nd.png","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","short":"CC BY-NC-ND (4.0)"},"citation":{"chicago":"Laukoter, Susanne, Florian Pauler, Robert J Beattie, Nicole Amberg, Andi H Hansen, Carmen Streicher, Thomas Penz, Christoph Bock, and Simon Hippenmeyer. “Cell-Type Specificity of Genomic Imprinting in Cerebral Cortex.” <i>Neuron</i>. Elsevier, 2020. <a href=\"https://doi.org/10.1016/j.neuron.2020.06.031\">https://doi.org/10.1016/j.neuron.2020.06.031</a>.","short":"S. Laukoter, F. Pauler, R.J. Beattie, N. Amberg, A.H. Hansen, C. Streicher, T. Penz, C. Bock, S. Hippenmeyer, Neuron 107 (2020) 1160–1179.e9.","ieee":"S. Laukoter <i>et al.</i>, “Cell-type specificity of genomic imprinting in cerebral cortex,” <i>Neuron</i>, vol. 107, no. 6. Elsevier, p. 1160–1179.e9, 2020.","mla":"Laukoter, Susanne, et al. “Cell-Type Specificity of Genomic Imprinting in Cerebral Cortex.” <i>Neuron</i>, vol. 107, no. 6, Elsevier, 2020, p. 1160–1179.e9, doi:<a href=\"https://doi.org/10.1016/j.neuron.2020.06.031\">10.1016/j.neuron.2020.06.031</a>.","ista":"Laukoter S, Pauler F, Beattie RJ, Amberg N, Hansen AH, Streicher C, Penz T, Bock C, Hippenmeyer S. 2020. Cell-type specificity of genomic imprinting in cerebral cortex. Neuron. 107(6), 1160–1179.e9.","apa":"Laukoter, S., Pauler, F., Beattie, R. J., Amberg, N., Hansen, A. H., Streicher, C., … Hippenmeyer, S. (2020). Cell-type specificity of genomic imprinting in cerebral cortex. <i>Neuron</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.neuron.2020.06.031\">https://doi.org/10.1016/j.neuron.2020.06.031</a>","ama":"Laukoter S, Pauler F, Beattie RJ, et al. Cell-type specificity of genomic imprinting in cerebral cortex. <i>Neuron</i>. 2020;107(6):1160-1179.e9. doi:<a href=\"https://doi.org/10.1016/j.neuron.2020.06.031\">10.1016/j.neuron.2020.06.031</a>"},"doi":"10.1016/j.neuron.2020.06.031","project":[{"_id":"2625A13E-B435-11E9-9278-68D0E5697425","grant_number":"24812","name":"Molecular mechanisms of radial neuronal migration"},{"_id":"268F8446-B435-11E9-9278-68D0E5697425","call_identifier":"FWF","grant_number":"T01031","name":"Role of Eed in neural stem cell lineage progression"},{"grant_number":"M02416","name":"Molecular Mechanisms Regulating Gliogenesis in the Neocortex","_id":"264E56E2-B435-11E9-9278-68D0E5697425","call_identifier":"FWF"},{"_id":"25D92700-B435-11E9-9278-68D0E5697425","name":"Mapping Cell-Type Specificity of the Genomic Imprintome in the Brain","grant_number":"LS13-002"},{"grant_number":"RGP0053/2014","name":"Quantitative Structure-Function Analysis of Cerebral Cortex Assembly at Clonal Level","_id":"25D7962E-B435-11E9-9278-68D0E5697425"},{"_id":"25D61E48-B435-11E9-9278-68D0E5697425","call_identifier":"FP7","grant_number":"618444","name":"Molecular Mechanisms of Cerebral Cortex Development"},{"call_identifier":"H2020","_id":"260018B0-B435-11E9-9278-68D0E5697425","name":"Principles of Neural Stem Cell Lineage Progression in Cerebral Cortex Development","grant_number":"725780"}],"volume":107,"scopus_import":"1","department":[{"_id":"SiHi"}],"oa_version":"Published Version","quality_controlled":"1","_id":"8162","external_id":{"pmid":["32707083"],"isi":["000579698700006"]},"license":"https://creativecommons.org/licenses/by-nc-nd/4.0/","acknowledgement":"We thank A. Heger (IST Austria Preclinical Facility), A. Sommer and C. Czepe (VBCF GmbH, NGS Unit), and A. Seitz and P. Moll (Lexogen GmbH) for technical support; G. Arque, S. Resch, C. Igler, C. Dotter, C. Yahya, Q. Hudson, and D. Andergassen for initial experiments and/or assistance; D. Barlow, O. Bell, and all members of the Hippenmeyer lab for discussion; and N. Barton, B. Vicoso, M. Sixt, and L. Luo for comments on earlier versions of the manuscript. This research was supported by the Scientific Service Units (SSU) of IST Austria through resources provided by the Bioimaging Facilities (BIF), Life Science Facilities (LSF), and Preclinical Facilities (PCF). A.H.H. is a recipient of a DOC fellowship (24812) of the Austrian Academy of Sciences. N.A. received support from the FWF Firnberg-Programm (T 1031). R.B. received support from the FWF Meitner-Programm (M 2416). This work was also supported by IST Austria institutional funds; a NÖ Forschung und Bildung n[f+b] life science call grant (C13-002) to S.H.; a program grant from the Human Frontiers Science Program (RGP0053/2014) to S.H.; the People Programme (Marie Curie Actions) of the European Union’s Seventh Framework Programme (FP7/2007-2013) under REA grant agreement 618444 to S.H.; and the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation program (grant agreement 725780 LinPro) to S.H.","related_material":{"link":[{"description":"News on IST Website","url":"https://ist.ac.at/en/news/cells-react-differently-to-genomic-imprinting/","relation":"press_release"}]},"article_type":"original","publication_identifier":{"issn":["0896-6273"]},"file_date_updated":"2020-12-02T09:26:46Z","day":"23","date_updated":"2025-06-12T07:19:46Z","title":"Cell-type specificity of genomic imprinting in cerebral cortex","author":[{"orcid":"0000-0002-7903-3010","last_name":"Laukoter","first_name":"Susanne","id":"2D6B7A9A-F248-11E8-B48F-1D18A9856A87","full_name":"Laukoter, Susanne"},{"first_name":"Florian","last_name":"Pauler","orcid":"0000-0002-7462-0048","full_name":"Pauler, Florian","id":"48EA0138-F248-11E8-B48F-1D18A9856A87"},{"id":"2E26DF60-F248-11E8-B48F-1D18A9856A87","full_name":"Beattie, Robert J","first_name":"Robert J","orcid":"0000-0002-8483-8753","last_name":"Beattie"},{"id":"4CD6AAC6-F248-11E8-B48F-1D18A9856A87","full_name":"Amberg, Nicole","orcid":"0000-0002-3183-8207","last_name":"Amberg","first_name":"Nicole"},{"id":"38853E16-F248-11E8-B48F-1D18A9856A87","full_name":"Hansen, Andi H","first_name":"Andi H","last_name":"Hansen"},{"first_name":"Carmen","last_name":"Streicher","id":"36BCB99C-F248-11E8-B48F-1D18A9856A87","full_name":"Streicher, Carmen"},{"full_name":"Penz, Thomas","last_name":"Penz","first_name":"Thomas"},{"first_name":"Christoph","orcid":"0000-0001-6091-3088","last_name":"Bock","full_name":"Bock, Christoph"},{"full_name":"Hippenmeyer, Simon","id":"37B36620-F248-11E8-B48F-1D18A9856A87","last_name":"Hippenmeyer","orcid":"0000-0003-2279-1061","first_name":"Simon"}]},{"project":[{"name":"ISTplus - Postdoctoral Fellowships","grant_number":"754411","call_identifier":"H2020","_id":"260C2330-B435-11E9-9278-68D0E5697425"},{"grant_number":"Z00342","name":"Mathematics, Computer Science","_id":"268116B8-B435-11E9-9278-68D0E5697425","call_identifier":"FWF"}],"tmp":{"image":"/images/cc_by_nc.png","legal_code_url":"https://creativecommons.org/licenses/by-nc/4.0/legalcode","name":"Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)","short":"CC BY-NC (4.0)"},"citation":{"ieee":"G. Vegter and M. Wintraecken, “Refutation of a claim made by Fejes Tóth on the accuracy of surface meshes,” <i>Studia Scientiarum Mathematicarum Hungarica</i>, vol. 57, no. 2. Akadémiai Kiadó, pp. 193–199, 2020.","mla":"Vegter, Gert, and Mathijs Wintraecken. “Refutation of a Claim Made by Fejes Tóth on the Accuracy of Surface Meshes.” <i>Studia Scientiarum Mathematicarum Hungarica</i>, vol. 57, no. 2, Akadémiai Kiadó, 2020, pp. 193–99, doi:<a href=\"https://doi.org/10.1556/012.2020.57.2.1454\">10.1556/012.2020.57.2.1454</a>.","ista":"Vegter G, Wintraecken M. 2020. Refutation of a claim made by Fejes Tóth on the accuracy of surface meshes. Studia Scientiarum Mathematicarum Hungarica. 57(2), 193–199.","ama":"Vegter G, Wintraecken M. Refutation of a claim made by Fejes Tóth on the accuracy of surface meshes. <i>Studia Scientiarum Mathematicarum Hungarica</i>. 2020;57(2):193-199. doi:<a href=\"https://doi.org/10.1556/012.2020.57.2.1454\">10.1556/012.2020.57.2.1454</a>","apa":"Vegter, G., &#38; Wintraecken, M. (2020). Refutation of a claim made by Fejes Tóth on the accuracy of surface meshes. <i>Studia Scientiarum Mathematicarum Hungarica</i>. Akadémiai Kiadó. <a href=\"https://doi.org/10.1556/012.2020.57.2.1454\">https://doi.org/10.1556/012.2020.57.2.1454</a>","chicago":"Vegter, Gert, and Mathijs Wintraecken. “Refutation of a Claim Made by Fejes Tóth on the Accuracy of Surface Meshes.” <i>Studia Scientiarum Mathematicarum Hungarica</i>. Akadémiai Kiadó, 2020. <a href=\"https://doi.org/10.1556/012.2020.57.2.1454\">https://doi.org/10.1556/012.2020.57.2.1454</a>.","short":"G. Vegter, M. Wintraecken, Studia Scientiarum Mathematicarum Hungarica 57 (2020) 193–199."},"doi":"10.1556/012.2020.57.2.1454","department":[{"_id":"HeEd"}],"scopus_import":"1","volume":57,"_id":"8163","quality_controlled":"1","oa_version":"Published Version","license":"https://creativecommons.org/licenses/by-nc/4.0/","external_id":{"isi":["000570978400005"]},"article_type":"original","acknowledgement":"The authors are greatly indebted to Dror Atariah, Günther Rote and John Sullivan for discussion and suggestions. The authors also thank Jean-Daniel Boissonnat, Ramsay Dyer, David de Laat and Rien van de Weijgaert for discussion. This work has been supported in part by the European Union’s Seventh Framework Programme for Research of the\r\nEuropean Commission, under FET-Open grant number 255827 (CGL Computational Geometry Learning) and ERC Grant Agreement number 339025 GUDHI (Algorithmic Foundations of Geometry Understanding in Higher Dimensions), the European Union’s Horizon 2020 research and innovation programme under the Marie Sk lodowska-Curie grant agreement number 754411,and the Austrian Science Fund (FWF): Z00342 N31.","file_date_updated":"2020-07-24T07:09:06Z","publication_identifier":{"eissn":["1588-2896"],"issn":["0081-6906"]},"day":"24","date_updated":"2025-04-15T07:16:57Z","title":"Refutation of a claim made by Fejes Tóth on the accuracy of surface meshes","author":[{"full_name":"Vegter, Gert","first_name":"Gert","last_name":"Vegter"},{"last_name":"Wintraecken","orcid":"0000-0002-7472-2220","first_name":"Mathijs","full_name":"Wintraecken, Mathijs","id":"307CFBC8-F248-11E8-B48F-1D18A9856A87"}],"language":[{"iso":"eng"}],"intvolume":"        57","date_created":"2020-07-24T07:09:18Z","abstract":[{"lang":"eng","text":"Fejes Tóth [3] studied approximations of smooth surfaces in three-space by piecewise flat triangular meshes with a given number of vertices on the surface that are optimal with respect to Hausdorff distance. He proves that this Hausdorff distance decreases inversely proportional with the number of vertices of the approximating mesh if the surface is convex. He also claims that this Hausdorff distance is inversely proportional to the square of the number of vertices for a specific non-convex surface, namely a one-sheeted hyperboloid of revolution bounded by two congruent circles. We refute this claim, and show that the asymptotic behavior of the Hausdorff distance is linear, that is the same as for convex surfaces."}],"has_accepted_license":"1","publisher":"Akadémiai Kiadó","publication":"Studia Scientiarum Mathematicarum Hungarica","corr_author":"1","ddc":["510"],"month":"07","status":"public","issue":"2","isi":1,"type":"journal_article","ec_funded":1,"oa":1,"page":"193-199","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2020-07-24T00:00:00Z","article_processing_charge":"No","year":"2020","publication_status":"published","file":[{"date_updated":"2020-07-24T07:09:06Z","file_id":"8164","content_type":"application/pdf","access_level":"open_access","file_size":1476072,"file_name":"57-2-05_4214-1454Vegter-Wintraecken_OpenAccess_CC-BY-NC.pdf","creator":"mwintrae","relation":"main_file","date_created":"2020-07-24T07:09:06Z"}]},{"status":"public","publication":"Philosophical Transactions of the Royal Society. Series B: Biological Sciences","month":"07","ddc":["570"],"issue":"1806","language":[{"iso":"eng"}],"intvolume":"       375","pmid":1,"abstract":[{"text":"The evolution of strong reproductive isolation (RI) is fundamental to the origins and maintenance of biological diversity, especially in situations where geographical distributions of taxa broadly overlap. But what is the history behind strong barriers currently acting in sympatry? Using whole-genome sequencing and single nucleotide polymorphism genotyping, we inferred (i) the evolutionary relationships, (ii) the strength of RI, and (iii) the demographic history of divergence between two broadly sympatric taxa of intertidal snail. Despite being cryptic, based on external morphology, Littorina arcana and Littorina saxatilis differ in their mode of female reproduction (egg-laying versus brooding), which may generate a strong post-zygotic barrier. We show that egg-laying and brooding snails are closely related, but genetically distinct. Genotyping of 3092 snails from three locations failed to recover any recent hybrid or backcrossed individuals, confirming that RI is strong. There was, however, evidence for a very low level of asymmetrical introgression, suggesting that isolation remains incomplete. The presence of strong, asymmetrical RI was further supported by demographic analysis of these populations. Although the taxa are currently broadly sympatric, demographic modelling suggests that they initially diverged during a short period of geographical separation involving very low gene flow. Our study suggests that some geographical separation may kick-start the evolution of strong RI, facilitating subsequent coexistence of taxa in sympatry. The strength of RI needed to achieve sympatry and the subsequent effect of sympatry on RI remain open questions.","lang":"eng"}],"date_created":"2020-07-26T22:01:01Z","publisher":"The Royal Society","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2020-07-12T00:00:00Z","article_number":"20190545","year":"2020","article_processing_charge":"No","publication_status":"published","type":"journal_article","isi":1,"oa":1,"_id":"8167","main_file_link":[{"url":"https://doi.org/10.1098/rstb.2019.0545","open_access":"1"}],"oa_version":"Published Version","quality_controlled":"1","doi":"10.1098/rstb.2019.0545","citation":{"ieee":"S. Stankowski <i>et al.</i>, “The evolution of strong reproductive isolation between sympatric intertidal snails,” <i>Philosophical Transactions of the Royal Society. Series B: Biological Sciences</i>, vol. 375, no. 1806. The Royal Society, 2020.","mla":"Stankowski, Sean, et al. “The Evolution of Strong Reproductive Isolation between Sympatric Intertidal Snails.” <i>Philosophical Transactions of the Royal Society. Series B: Biological Sciences</i>, vol. 375, no. 1806, 20190545, The Royal Society, 2020, doi:<a href=\"https://doi.org/10.1098/rstb.2019.0545\">10.1098/rstb.2019.0545</a>.","ista":"Stankowski S, Westram AM, Zagrodzka ZB, Eyres I, Broquet T, Johannesson K, Butlin RK. 2020. The evolution of strong reproductive isolation between sympatric intertidal snails. Philosophical Transactions of the Royal Society. Series B: Biological Sciences. 375(1806), 20190545.","apa":"Stankowski, S., Westram, A. M., Zagrodzka, Z. B., Eyres, I., Broquet, T., Johannesson, K., &#38; Butlin, R. K. (2020). The evolution of strong reproductive isolation between sympatric intertidal snails. <i>Philosophical Transactions of the Royal Society. Series B: Biological Sciences</i>. The Royal Society. <a href=\"https://doi.org/10.1098/rstb.2019.0545\">https://doi.org/10.1098/rstb.2019.0545</a>","ama":"Stankowski S, Westram AM, Zagrodzka ZB, et al. The evolution of strong reproductive isolation between sympatric intertidal snails. <i>Philosophical Transactions of the Royal Society Series B: Biological Sciences</i>. 2020;375(1806). doi:<a href=\"https://doi.org/10.1098/rstb.2019.0545\">10.1098/rstb.2019.0545</a>","chicago":"Stankowski, Sean, Anja M Westram, Zuzanna B. Zagrodzka, Isobel Eyres, Thomas Broquet, Kerstin Johannesson, and Roger K. Butlin. “The Evolution of Strong Reproductive Isolation between Sympatric Intertidal Snails.” <i>Philosophical Transactions of the Royal Society. Series B: Biological Sciences</i>. The Royal Society, 2020. <a href=\"https://doi.org/10.1098/rstb.2019.0545\">https://doi.org/10.1098/rstb.2019.0545</a>.","short":"S. Stankowski, A.M. Westram, Z.B. Zagrodzka, I. Eyres, T. Broquet, K. Johannesson, R.K. Butlin, Philosophical Transactions of the Royal Society. Series B: Biological Sciences 375 (2020)."},"scopus_import":"1","department":[{"_id":"NiBa"}],"volume":375,"date_updated":"2026-06-18T19:30:29Z","title":"The evolution of strong reproductive isolation between sympatric intertidal snails","author":[{"id":"43161670-5719-11EA-8025-FABC3DDC885E","full_name":"Stankowski, Sean","last_name":"Stankowski","first_name":"Sean"},{"last_name":"Westram","orcid":"0000-0003-1050-4969","first_name":"Anja M","full_name":"Westram, Anja M","id":"3C147470-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Zagrodzka","first_name":"Zuzanna B.","full_name":"Zagrodzka, Zuzanna B."},{"full_name":"Eyres, Isobel","first_name":"Isobel","last_name":"Eyres"},{"full_name":"Broquet, Thomas","last_name":"Broquet","first_name":"Thomas"},{"first_name":"Kerstin","last_name":"Johannesson","full_name":"Johannesson, Kerstin"},{"full_name":"Butlin, Roger K.","first_name":"Roger K.","last_name":"Butlin"}],"external_id":{"pmid":["32654639"],"isi":["000552662100014"]},"publication_identifier":{"eissn":["1471-2970"]},"acknowledgement":"Funding was provided by the Natural Environment Research Council (NERC) and the European Research Council. We thank Rui Faria, Nicola Nadeau, Martin Garlovsky and Hernan Morales for advice and/or useful discussion during the project. Richard Turney, Graciela Sotelo, Jenny Larson, Stéphane Loisel and Meghan Wharton participated in the collection and processing of samples. Mark Dunning helped with the development of bioinformatic pipelines. The analysis of genomic data was conducted on the University of Sheffield High-performance computer, ShARC. Jeffrey Feder and an anonymous reviewer provided comments that improved the manuscript.","article_type":"original","day":"12"},{"author":[{"full_name":"Kulmuni, Jonna","first_name":"Jonna","last_name":"Kulmuni"},{"full_name":"Butlin, Roger K.","first_name":"Roger K.","last_name":"Butlin"},{"last_name":"Lucek","first_name":"Kay","full_name":"Lucek, Kay"},{"first_name":"Vincent","last_name":"Savolainen","full_name":"Savolainen, Vincent"},{"orcid":"0000-0003-1050-4969","last_name":"Westram","first_name":"Anja M","id":"3C147470-F248-11E8-B48F-1D18A9856A87","full_name":"Westram, Anja M"}],"date_updated":"2026-06-18T19:30:51Z","title":"Towards the completion of speciation: The evolution of reproductive isolation beyond the first barriers","article_type":"original","publication_identifier":{"issn":["0962-8436"],"eissn":["1471-2970"]},"day":"12","external_id":{"isi":["000552662100001"],"pmid":["32654637"]},"main_file_link":[{"open_access":"1","url":"https://doi.org/10.1098/rstb.2019.0528"}],"quality_controlled":"1","oa_version":"Published Version","_id":"8168","volume":375,"department":[{"_id":"NiBa"}],"scopus_import":"1","doi":"10.1098/rstb.2019.0528","citation":{"apa":"Kulmuni, J., Butlin, R. K., Lucek, K., Savolainen, V., &#38; Westram, A. M. (2020). Towards the completion of speciation: The evolution of reproductive isolation beyond the first barriers. <i>Philosophical Transactions of the Royal Society. Series B: Biological Sciences</i>. The Royal Society. <a href=\"https://doi.org/10.1098/rstb.2019.0528\">https://doi.org/10.1098/rstb.2019.0528</a>","ista":"Kulmuni J, Butlin RK, Lucek K, Savolainen V, Westram AM. 2020. Towards the completion of speciation: The evolution of reproductive isolation beyond the first barriers. Philosophical Transactions of the Royal Society. Series B: Biological sciences. 375(1806), 20190528.","ama":"Kulmuni J, Butlin RK, Lucek K, Savolainen V, Westram AM. Towards the completion of speciation: The evolution of reproductive isolation beyond the first barriers. <i>Philosophical Transactions of the Royal Society Series B: Biological sciences</i>. 2020;375(1806). doi:<a href=\"https://doi.org/10.1098/rstb.2019.0528\">10.1098/rstb.2019.0528</a>","ieee":"J. Kulmuni, R. K. Butlin, K. Lucek, V. Savolainen, and A. M. Westram, “Towards the completion of speciation: The evolution of reproductive isolation beyond the first barriers,” <i>Philosophical Transactions of the Royal Society. Series B: Biological sciences</i>, vol. 375, no. 1806. The Royal Society, 2020.","mla":"Kulmuni, Jonna, et al. “Towards the Completion of Speciation: The Evolution of Reproductive Isolation beyond the First Barriers.” <i>Philosophical Transactions of the Royal Society. Series B: Biological Sciences</i>, vol. 375, no. 1806, 20190528, The Royal Society, 2020, doi:<a href=\"https://doi.org/10.1098/rstb.2019.0528\">10.1098/rstb.2019.0528</a>.","short":"J. Kulmuni, R.K. Butlin, K. Lucek, V. Savolainen, A.M. Westram, Philosophical Transactions of the Royal Society. Series B: Biological Sciences 375 (2020).","chicago":"Kulmuni, Jonna, Roger K. Butlin, Kay Lucek, Vincent Savolainen, and Anja M Westram. “Towards the Completion of Speciation: The Evolution of Reproductive Isolation beyond the First Barriers.” <i>Philosophical Transactions of the Royal Society. Series B: Biological Sciences</i>. The Royal Society, 2020. <a href=\"https://doi.org/10.1098/rstb.2019.0528\">https://doi.org/10.1098/rstb.2019.0528</a>."},"project":[{"call_identifier":"H2020","_id":"265B41B8-B435-11E9-9278-68D0E5697425","name":"Theoretical and empirical approaches to understanding Parallel Adaptation","grant_number":"797747"}],"year":"2020","article_processing_charge":"No","publication_status":"published","date_published":"2020-07-12T00:00:00Z","article_number":"20190528","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa":1,"type":"journal_article","ec_funded":1,"isi":1,"issue":"1806","ddc":["570"],"publication":"Philosophical Transactions of the Royal Society. Series B: Biological sciences","month":"07","status":"public","publisher":"The Royal Society","pmid":1,"date_created":"2020-07-26T22:01:01Z","abstract":[{"lang":"eng","text":"Speciation, that is, the evolution of reproductive barriers eventually leading to complete isolation, is a crucial process generating biodiversity. Recent work has contributed much to our understanding of how reproductive barriers begin to evolve, and how they are maintained in the face of gene flow. However, little is known about the transition from partial to strong reproductive isolation (RI) and the completion of speciation. We argue that the evolution of strong RI is likely to involve different processes, or new interactions among processes, compared with the evolution of the first reproductive barriers. Transition to strong RI may be brought about by changing external conditions, for example, following secondary contact. However, the increasing levels of RI themselves create opportunities for new barriers to evolve and, and interaction or coupling among barriers. These changing processes may depend on genomic architecture and leave detectable signals in the genome. We outline outstanding questions and suggest more theoretical and empirical work, considering both patterns and processes associated with strong RI, is needed to understand how speciation is completed."}],"intvolume":"       375","language":[{"iso":"eng"}]},{"_id":"8170","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/2006.02694"}],"quality_controlled":"1","oa_version":"Preprint","project":[{"grant_number":"P29902","name":"Quantum rotations in the presence of a many-body environment","_id":"26031614-B435-11E9-9278-68D0E5697425","call_identifier":"FWF"},{"name":"Angulon: physics and applications of a new quasiparticle","grant_number":"801770","call_identifier":"H2020","_id":"2688CF98-B435-11E9-9278-68D0E5697425"},{"_id":"26986C82-B435-11E9-9278-68D0E5697425","call_identifier":"FWF","grant_number":"M02641","name":"A path-integral approach to composite impurities"},{"call_identifier":"H2020","_id":"2564DBCA-B435-11E9-9278-68D0E5697425","name":"International IST Doctoral Program","grant_number":"665385"}],"citation":{"ieee":"A. S. Chatterley <i>et al.</i>, “Rotational coherence spectroscopy of molecules in Helium nanodroplets: Reconciling the time and the frequency domains,” <i>Physical Review Letters</i>, vol. 125, no. 1. American Physical Society, 2020.","mla":"Chatterley, Adam S., et al. “Rotational Coherence Spectroscopy of Molecules in Helium Nanodroplets: Reconciling the Time and the Frequency Domains.” <i>Physical Review Letters</i>, vol. 125, no. 1, 013001, American Physical Society, 2020, doi:<a href=\"https://doi.org/10.1103/PhysRevLett.125.013001\">10.1103/PhysRevLett.125.013001</a>.","ama":"Chatterley AS, Christiansen L, Schouder CA, et al. Rotational coherence spectroscopy of molecules in Helium nanodroplets: Reconciling the time and the frequency domains. <i>Physical Review Letters</i>. 2020;125(1). doi:<a href=\"https://doi.org/10.1103/PhysRevLett.125.013001\">10.1103/PhysRevLett.125.013001</a>","ista":"Chatterley AS, Christiansen L, Schouder CA, Jørgensen AV, Shepperson B, Cherepanov I, Bighin G, Zillich RE, Lemeshko M, Stapelfeldt H. 2020. Rotational coherence spectroscopy of molecules in Helium nanodroplets: Reconciling the time and the frequency domains. Physical Review Letters. 125(1), 013001.","apa":"Chatterley, A. S., Christiansen, L., Schouder, C. A., Jørgensen, A. V., Shepperson, B., Cherepanov, I., … Stapelfeldt, H. (2020). Rotational coherence spectroscopy of molecules in Helium nanodroplets: Reconciling the time and the frequency domains. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevLett.125.013001\">https://doi.org/10.1103/PhysRevLett.125.013001</a>","chicago":"Chatterley, Adam S., Lars Christiansen, Constant A. Schouder, Anders V. Jørgensen, Benjamin Shepperson, Igor Cherepanov, Giacomo Bighin, Robert E. Zillich, Mikhail Lemeshko, and Henrik Stapelfeldt. “Rotational Coherence Spectroscopy of Molecules in Helium Nanodroplets: Reconciling the Time and the Frequency Domains.” <i>Physical Review Letters</i>. American Physical Society, 2020. <a href=\"https://doi.org/10.1103/PhysRevLett.125.013001\">https://doi.org/10.1103/PhysRevLett.125.013001</a>.","short":"A.S. Chatterley, L. Christiansen, C.A. Schouder, A.V. Jørgensen, B. Shepperson, I. Cherepanov, G. Bighin, R.E. Zillich, M. Lemeshko, H. Stapelfeldt, Physical Review Letters 125 (2020)."},"doi":"10.1103/PhysRevLett.125.013001","department":[{"_id":"MiLe"}],"scopus_import":"1","volume":125,"date_updated":"2026-04-16T08:21:58Z","title":"Rotational coherence spectroscopy of molecules in Helium nanodroplets: Reconciling the time and the frequency domains","author":[{"first_name":"Adam S.","last_name":"Chatterley","full_name":"Chatterley, Adam S."},{"last_name":"Christiansen","first_name":"Lars","full_name":"Christiansen, Lars"},{"full_name":"Schouder, Constant A.","first_name":"Constant A.","last_name":"Schouder"},{"first_name":"Anders V.","last_name":"Jørgensen","full_name":"Jørgensen, Anders V."},{"first_name":"Benjamin","last_name":"Shepperson","full_name":"Shepperson, Benjamin"},{"last_name":"Cherepanov","first_name":"Igor","full_name":"Cherepanov, Igor","id":"339C7E5A-F248-11E8-B48F-1D18A9856A87"},{"id":"4CA96FD4-F248-11E8-B48F-1D18A9856A87","full_name":"Bighin, Giacomo","first_name":"Giacomo","orcid":"0000-0001-8823-9777","last_name":"Bighin"},{"last_name":"Zillich","first_name":"Robert E.","full_name":"Zillich, Robert E."},{"first_name":"Mikhail","orcid":"0000-0002-6990-7802","last_name":"Lemeshko","id":"37CB05FA-F248-11E8-B48F-1D18A9856A87","full_name":"Lemeshko, Mikhail"},{"full_name":"Stapelfeldt, Henrik","first_name":"Henrik","last_name":"Stapelfeldt"}],"external_id":{"isi":["000544526900006"],"arxiv":["2006.02694"],"pmid":["32678640"]},"acknowledgement":"H. S. acknowledges support from the European Research Council-AdG (Project No. 320459, DropletControl)\r\nand from The Villum Foundation through a Villum Investigator Grant No. 25886. M. L. acknowledges support\r\nby the Austrian Science Fund (FWF), under Project No. P29902-N27, and by the European Research Council\r\n(ERC) Starting Grant No. 801770 (ANGULON). G. B. acknowledges support from the Austrian Science Fund\r\n(FWF), under Project No. M2641-N27. I. C. acknowledges support by the European Union’s Horizon 2020 research and\r\ninnovation programme under the Marie Skłodowska-Curie Grant Agreement No. 665385. Computational resources for\r\nthe PIMC simulations were provided by the division for scientific computing at the Johannes Kepler University.","publication_identifier":{"issn":["0031-9007"],"eissn":["1079-7114"]},"article_type":"original","day":"03","arxiv":1,"publication":"Physical Review Letters","status":"public","month":"07","issue":"1","language":[{"iso":"eng"}],"intvolume":"       125","date_created":"2020-07-26T22:01:02Z","abstract":[{"text":"Alignment of OCS, CS2, and I2 molecules embedded in helium nanodroplets is measured as a function\r\nof time following rotational excitation by a nonresonant, comparatively weak ps laser pulse. The distinct\r\npeaks in the power spectra, obtained by Fourier analysis, are used to determine the rotational, B, and\r\ncentrifugal distortion, D, constants. For OCS, B and D match the values known from IR spectroscopy. For\r\nCS2 and I2, they are the first experimental results reported. The alignment dynamics calculated from the\r\ngas-phase rotational Schrödinger equation, using the experimental in-droplet B and D values, agree in\r\ndetail with the measurement for all three molecules. The rotational spectroscopy technique for molecules in\r\nhelium droplets introduced here should apply to a range of molecules and complexes.","lang":"eng"}],"pmid":1,"publisher":"American Physical Society","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","date_published":"2020-07-03T00:00:00Z","article_number":"013001","year":"2020","article_processing_charge":"No","publication_status":"published","isi":1,"type":"journal_article","ec_funded":1,"oa":1},{"month":"08","status":"public","corr_author":"1","_id":"8181","publisher":"IST Austria","date_created":"2020-07-28T16:24:37Z","has_accepted_license":"1","department":[{"_id":"Bio"}],"tmp":{"legal_code_url":"https://opensource.org/licenses/BSD-3-Clause","name":"The 3-Clause BSD License","short":"3-Clause BSD"},"citation":{"ista":"Hauschild R. 2020. Amplified centrosomes in dendritic cells promote immune cell effector functions, IST Austria, <a href=\"https://doi.org/10.15479/AT:ISTA:8181\">10.15479/AT:ISTA:8181</a>.","ama":"Hauschild R. Amplified centrosomes in dendritic cells promote immune cell effector functions. 2020. doi:<a href=\"https://doi.org/10.15479/AT:ISTA:8181\">10.15479/AT:ISTA:8181</a>","apa":"Hauschild, R. (2020). Amplified centrosomes in dendritic cells promote immune cell effector functions. IST Austria. <a href=\"https://doi.org/10.15479/AT:ISTA:8181\">https://doi.org/10.15479/AT:ISTA:8181</a>","mla":"Hauschild, Robert. <i>Amplified Centrosomes in Dendritic Cells Promote Immune Cell Effector Functions</i>. IST Austria, 2020, doi:<a href=\"https://doi.org/10.15479/AT:ISTA:8181\">10.15479/AT:ISTA:8181</a>.","ieee":"R. Hauschild, “Amplified centrosomes in dendritic cells promote immune cell effector functions.” IST Austria, 2020.","short":"R. Hauschild, (2020).","chicago":"Hauschild, Robert. “Amplified Centrosomes in Dendritic Cells Promote Immune Cell Effector Functions.” IST Austria, 2020. <a href=\"https://doi.org/10.15479/AT:ISTA:8181\">https://doi.org/10.15479/AT:ISTA:8181</a>."},"doi":"10.15479/AT:ISTA:8181","author":[{"last_name":"Hauschild","orcid":"0000-0001-9843-3522","first_name":"Robert","full_name":"Hauschild, Robert","id":"4E01D6B4-F248-11E8-B48F-1D18A9856A87"}],"file":[{"date_updated":"2020-08-24T15:43:49Z","success":1,"file_id":"8290","access_level":"open_access","content_type":"text/plain","file_size":6577,"creator":"rhauschild","checksum":"878c60885ce30afb59a884dd5eef451c","file_name":"centriolesDistance.m","date_created":"2020-08-24T15:43:49Z","relation":"main_file"},{"file_id":"8291","success":1,"date_updated":"2020-08-24T15:43:52Z","checksum":"5a93ac7be2b66b28e4bd8b113ee6aade","creator":"rhauschild","file_name":"goTracking.m","relation":"main_file","date_created":"2020-08-24T15:43:52Z","content_type":"text/plain","access_level":"open_access","file_size":2680}],"year":"2020","title":"Amplified centrosomes in dendritic cells promote immune cell effector functions","date_updated":"2024-10-09T21:05:14Z","date_published":"2020-08-24T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","day":"24","file_date_updated":"2020-08-24T15:43:52Z","oa":1,"type":"software","license":"https://opensource.org/licenses/BSD-3-Clause"},{"oa":1,"type":"conference","page":"7498-7507","date_published":"2020-07-01T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","file":[{"file_size":10262773,"content_type":"application/pdf","access_level":"open_access","relation":"main_file","date_created":"2020-07-31T16:57:12Z","file_name":"paper.pdf","creator":"phenders","date_updated":"2020-07-31T16:57:12Z","file_id":"8187","success":1}],"publication_status":"published","article_processing_charge":"No","year":"2020","language":[{"iso":"eng"}],"publisher":"IEEE","abstract":[{"text":"Numerous methods have been proposed for probabilistic generative modelling of\r\n3D objects. However, none of these is able to produce textured objects, which\r\nrenders them of limited use for practical tasks. In this work, we present the\r\nfirst generative model of textured 3D meshes. Training such a model would\r\ntraditionally require a large dataset of textured meshes, but unfortunately,\r\nexisting datasets of meshes lack detailed textures. We instead propose a new\r\ntraining methodology that allows learning from collections of 2D images without\r\nany 3D information. To do so, we train our model to explain a distribution of\r\nimages by modelling each image as a 3D foreground object placed in front of a\r\n2D background. Thus, it learns to generate meshes that when rendered, produce\r\nimages similar to those in its training set.\r\n  A well-known problem when generating meshes with deep networks is the\r\nemergence of self-intersections, which are problematic for many use-cases. As a\r\nsecond contribution we therefore introduce a new generation process for 3D\r\nmeshes that guarantees no self-intersections arise, based on the physical\r\nintuition that faces should push one another out of the way as they move.\r\n  We conduct extensive experiments on our approach, reporting quantitative and\r\nqualitative results on both synthetic data and natural images. These show our\r\nmethod successfully learns to generate plausible and diverse textured 3D\r\nsamples for five challenging object classes.","lang":"eng"}],"date_created":"2020-07-31T16:53:49Z","has_accepted_license":"1","publication":"Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition","status":"public","month":"07","ddc":["004"],"external_id":{"arxiv":["2004.04180"]},"conference":{"start_date":"2020-06-14","name":"CVPR: Conference on Computer Vision and Pattern Recognition","location":"Virtual","end_date":"2020-06-19"},"arxiv":1,"day":"01","file_date_updated":"2020-07-31T16:57:12Z","publication_identifier":{"eissn":["2575-7075"],"eisbn":["9781728171685"]},"title":"Leveraging 2D data to learn textured 3D mesh generation","date_updated":"2023-10-17T07:37:11Z","author":[{"full_name":"Henderson, Paul M","id":"13C09E74-18D9-11E9-8878-32CFE5697425","first_name":"Paul M","last_name":"Henderson","orcid":"0000-0002-5198-7445"},{"full_name":"Tsiminaki, Vagia","last_name":"Tsiminaki","first_name":"Vagia"},{"full_name":"Lampert, Christoph","id":"40C20FD2-F248-11E8-B48F-1D18A9856A87","last_name":"Lampert","orcid":"0000-0001-8622-7887","first_name":"Christoph"}],"citation":{"ista":"Henderson PM, Tsiminaki V, Lampert C. 2020. Leveraging 2D data to learn textured 3D mesh generation. Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition. CVPR: Conference on Computer Vision and Pattern Recognition, 7498–7507.","ama":"Henderson PM, Tsiminaki V, Lampert C. Leveraging 2D data to learn textured 3D mesh generation. In: <i>Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition</i>. IEEE; 2020:7498-7507. doi:<a href=\"https://doi.org/10.1109/CVPR42600.2020.00752\">10.1109/CVPR42600.2020.00752</a>","apa":"Henderson, P. M., Tsiminaki, V., &#38; Lampert, C. (2020). Leveraging 2D data to learn textured 3D mesh generation. In <i>Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition</i> (pp. 7498–7507). Virtual: IEEE. <a href=\"https://doi.org/10.1109/CVPR42600.2020.00752\">https://doi.org/10.1109/CVPR42600.2020.00752</a>","ieee":"P. M. Henderson, V. Tsiminaki, and C. Lampert, “Leveraging 2D data to learn textured 3D mesh generation,” in <i>Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition</i>, Virtual, 2020, pp. 7498–7507.","mla":"Henderson, Paul M., et al. “Leveraging 2D Data to Learn Textured 3D Mesh Generation.” <i>Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition</i>, IEEE, 2020, pp. 7498–507, doi:<a href=\"https://doi.org/10.1109/CVPR42600.2020.00752\">10.1109/CVPR42600.2020.00752</a>.","short":"P.M. Henderson, V. Tsiminaki, C. Lampert, in:, Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, IEEE, 2020, pp. 7498–7507.","chicago":"Henderson, Paul M, Vagia Tsiminaki, and Christoph Lampert. “Leveraging 2D Data to Learn Textured 3D Mesh Generation.” In <i>Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition</i>, 7498–7507. IEEE, 2020. <a href=\"https://doi.org/10.1109/CVPR42600.2020.00752\">https://doi.org/10.1109/CVPR42600.2020.00752</a>."},"doi":"10.1109/CVPR42600.2020.00752","scopus_import":"1","department":[{"_id":"ChLa"}],"quality_controlled":"1","oa_version":"Submitted Version","main_file_link":[{"url":"https://openaccess.thecvf.com/content_CVPR_2020/papers/Henderson_Leveraging_2D_Data_to_Learn_Textured_3D_Mesh_Generation_CVPR_2020_paper.pdf","open_access":"1"}],"_id":"8186"},{"publisher":"Neural Information Processing Systems Foundation","date_created":"2020-07-31T16:59:19Z","abstract":[{"text":"A natural approach to generative modeling of videos is to represent them as a composition of moving objects. Recent works model a set of 2D sprites over a slowly-varying background, but without considering the underlying 3D scene that\r\ngives rise to them. We instead propose to model a video as the view seen while moving through a scene with multiple 3D objects and a 3D background. Our model is trained from monocular videos without any supervision, yet learns to\r\ngenerate coherent 3D scenes containing several moving objects. We conduct detailed experiments on two datasets, going beyond the visual complexity supported by state-of-the-art generative approaches. We evaluate our method on\r\ndepth-prediction and 3D object detection---tasks which cannot be addressed by those earlier works---and show it out-performs them even on 2D instance segmentation and tracking.","lang":"eng"}],"alternative_title":["Advances in Neural Information Processing Systems"],"intvolume":"        33","language":[{"iso":"eng"}],"month":"07","corr_author":"1","publication":"34th Conference on Neural Information Processing Systems","status":"public","acknowledged_ssus":[{"_id":"ScienComp"}],"page":"3106–3117","oa":1,"type":"conference","publication_status":"published","year":"2020","article_processing_charge":"No","date_published":"2020-07-07T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","volume":33,"department":[{"_id":"ChLa"}],"citation":{"ama":"Henderson PM, Lampert C. Unsupervised object-centric video generation and decomposition in 3D. In: <i>34th Conference on Neural Information Processing Systems</i>. Vol 33. Neural Information Processing Systems Foundation; 2020:3106–3117.","ista":"Henderson PM, Lampert C. 2020. Unsupervised object-centric video generation and decomposition in 3D. 34th Conference on Neural Information Processing Systems. NeurIPS: Neural Information Processing Systems, Advances in Neural Information Processing Systems, vol. 33, 3106–3117.","apa":"Henderson, P. M., &#38; Lampert, C. (2020). Unsupervised object-centric video generation and decomposition in 3D. In <i>34th Conference on Neural Information Processing Systems</i> (Vol. 33, pp. 3106–3117). Vancouver, Canada: Neural Information Processing Systems Foundation.","mla":"Henderson, Paul M., and Christoph Lampert. “Unsupervised Object-Centric Video Generation and Decomposition in 3D.” <i>34th Conference on Neural Information Processing Systems</i>, vol. 33, Neural Information Processing Systems Foundation, 2020, pp. 3106–3117.","ieee":"P. M. Henderson and C. Lampert, “Unsupervised object-centric video generation and decomposition in 3D,” in <i>34th Conference on Neural Information Processing Systems</i>, Vancouver, Canada, 2020, vol. 33, pp. 3106–3117.","short":"P.M. Henderson, C. Lampert, in:, 34th Conference on Neural Information Processing Systems, Neural Information Processing Systems Foundation, 2020, pp. 3106–3117.","chicago":"Henderson, Paul M, and Christoph Lampert. “Unsupervised Object-Centric Video Generation and Decomposition in 3D.” In <i>34th Conference on Neural Information Processing Systems</i>, 33:3106–3117. Neural Information Processing Systems Foundation, 2020."},"oa_version":"Preprint","quality_controlled":"1","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/2007.06705"}],"_id":"8188","arxiv":1,"day":"07","publication_identifier":{"isbn":["9781713829546"]},"acknowledgement":"This research was supported by the Scientific Service Units (SSU) of IST Austria through resources\r\nprovided by Scientific Computing (SciComp). PH is employed part-time by Blackford Analysis, but\r\nthey did not support this project in any way.","external_id":{"arxiv":["2007.06705"]},"conference":{"name":"NeurIPS: Neural Information Processing Systems","location":"Vancouver, Canada","start_date":"2020-12-06","end_date":"2020-12-12"},"author":[{"last_name":"Henderson","orcid":"0000-0002-5198-7445","first_name":"Paul M","full_name":"Henderson, Paul M","id":"13C09E74-18D9-11E9-8878-32CFE5697425"},{"full_name":"Lampert, Christoph","id":"40C20FD2-F248-11E8-B48F-1D18A9856A87","last_name":"Lampert","orcid":"0000-0001-8622-7887","first_name":"Christoph"}],"title":"Unsupervised object-centric video generation and decomposition in 3D","date_updated":"2025-05-14T11:26:57Z"},{"publisher":"Elsevier","date_created":"2020-08-02T22:00:57Z","abstract":[{"text":"Direct ethanol fuel cells (DEFCs) show a huge potential to power future electric vehicles and portable electronics, but their deployment is currently limited by the unavailability of proper electrocatalysis for the ethanol oxidation reaction (EOR). In this work, we engineer a new electrocatalyst by incorporating phosphorous into a palladium-tin alloy and demonstrate a significant performance improvement toward EOR. We first detail a synthetic method to produce Pd2Sn:P nanocrystals that incorporate 35% of phosphorus. These nanoparticles are supported on carbon black and tested for EOR. Pd2Sn:P/C catalysts exhibit mass current densities up to 5.03 A mgPd−1, well above those of Pd2Sn/C, PdP2/C and Pd/C reference catalysts. Furthermore, a twofold lower Tafel slope and a much longer durability are revealed for the Pd2Sn:P/C catalyst compared with Pd/C. The performance improvement is rationalized with the aid of density functional theory (DFT) calculations considering different phosphorous chemical environments. Depending on its oxidation state, surface phosphorus introduces sites with low energy OH− adsorption and/or strongly influences the electronic structure of palladium and tin to facilitate the oxidation of the acetyl to acetic acid, which is considered the EOR rate limiting step. DFT calculations also points out that the durability improvement of Pd2Sn:P/C catalyst is associated to the promotion of OH adsorption that accelerates the oxidation of intermediate poisoning COads, reactivating the catalyst surface.","lang":"eng"}],"intvolume":"        77","OA_type":"green","language":[{"iso":"eng"}],"issue":"11","publication":"Nano Energy","month":"11","status":"public","oa":1,"isi":1,"type":"journal_article","publication_status":"published","article_processing_charge":"No","year":"2020","date_published":"2020-11-01T00:00:00Z","article_number":"105116","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","volume":77,"department":[{"_id":"MaIb"}],"scopus_import":"1","citation":{"chicago":"Yu, Xiaoting, Junfeng Liu, Junshan Li, Zhishan Luo, Yong Zuo, Congcong Xing, Jordi Llorca, et al. “Phosphorous Incorporation in Pd2Sn Alloys for Electrocatalytic Ethanol Oxidation.” <i>Nano Energy</i>. Elsevier, 2020. <a href=\"https://doi.org/10.1016/j.nanoen.2020.105116\">https://doi.org/10.1016/j.nanoen.2020.105116</a>.","short":"X. Yu, J. Liu, J. Li, Z. Luo, Y. Zuo, C. Xing, J. Llorca, D. Nasiou, J. Arbiol, K. Pan, T. Kleinhanns, Y. Xie, A. Cabot, Nano Energy 77 (2020).","ieee":"X. Yu <i>et al.</i>, “Phosphorous incorporation in Pd2Sn alloys for electrocatalytic ethanol oxidation,” <i>Nano Energy</i>, vol. 77, no. 11. Elsevier, 2020.","mla":"Yu, Xiaoting, et al. “Phosphorous Incorporation in Pd2Sn Alloys for Electrocatalytic Ethanol Oxidation.” <i>Nano Energy</i>, vol. 77, no. 11, 105116, Elsevier, 2020, doi:<a href=\"https://doi.org/10.1016/j.nanoen.2020.105116\">10.1016/j.nanoen.2020.105116</a>.","ista":"Yu X, Liu J, Li J, Luo Z, Zuo Y, Xing C, Llorca J, Nasiou D, Arbiol J, Pan K, Kleinhanns T, Xie Y, Cabot A. 2020. Phosphorous incorporation in Pd2Sn alloys for electrocatalytic ethanol oxidation. Nano Energy. 77(11), 105116.","ama":"Yu X, Liu J, Li J, et al. Phosphorous incorporation in Pd2Sn alloys for electrocatalytic ethanol oxidation. <i>Nano Energy</i>. 2020;77(11). doi:<a href=\"https://doi.org/10.1016/j.nanoen.2020.105116\">10.1016/j.nanoen.2020.105116</a>","apa":"Yu, X., Liu, J., Li, J., Luo, Z., Zuo, Y., Xing, C., … Cabot, A. (2020). Phosphorous incorporation in Pd2Sn alloys for electrocatalytic ethanol oxidation. <i>Nano Energy</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.nanoen.2020.105116\">https://doi.org/10.1016/j.nanoen.2020.105116</a>"},"doi":"10.1016/j.nanoen.2020.105116","quality_controlled":"1","oa_version":"Submitted Version","main_file_link":[{"open_access":"1","url":"http://hdl.handle.net/2117/335346"}],"_id":"8189","day":"01","article_type":"original","publication_identifier":{"issn":["2211-2855"]},"acknowledgement":"This work was supported by the European Regional Development Funds and by the Spanish Ministerio de Economía y Competitividad through the project SEHTOP, ENE2016- 77798-C4-3-R, and ENE2017-85087-C3. X. Y. thanks the China Scholarship Council for the scholarship support. J. Liu acknowledges support from the Jiangsu University Foundation (4111510011). J. Li obtained International Postdoctoral Exchange Fellowship Program (Talent-Introduction program) in 2019 and is grateful for the project (2019M663468) funded by the China Postdoctoral Science Foundation. Authors acknowledge funding from Generalitat de Catalunya 2017 SGR 327 and 2017 SGR 1246, and from IST Austria. ICN2 acknowledges the support from the Severo Ochoa Programme (MINECO, grant no. SEV-2017-0706) and is funded by the CERCA Programme/Generalitat de Catalunya. J. Llorca is a Serra Húnter Fellow and is grateful to MICINN/FEDER RTI2018-093996-B-C31, GC 2017 SGR 128 and to ICREA Academia program.","external_id":{"isi":["000581738300030"]},"OA_place":"repository","author":[{"full_name":"Yu, Xiaoting","first_name":"Xiaoting","last_name":"Yu"},{"full_name":"Liu, Junfeng","first_name":"Junfeng","last_name":"Liu"},{"first_name":"Junshan","last_name":"Li","full_name":"Li, Junshan"},{"first_name":"Zhishan","last_name":"Luo","full_name":"Luo, Zhishan"},{"last_name":"Zuo","first_name":"Yong","full_name":"Zuo, Yong"},{"last_name":"Xing","first_name":"Congcong","full_name":"Xing, Congcong"},{"first_name":"Jordi","last_name":"Llorca","full_name":"Llorca, Jordi"},{"full_name":"Nasiou, Déspina","first_name":"Déspina","last_name":"Nasiou"},{"last_name":"Arbiol","first_name":"Jordi","full_name":"Arbiol, Jordi"},{"first_name":"Kai","last_name":"Pan","full_name":"Pan, Kai"},{"full_name":"Kleinhanns, Tobias","id":"8BD9DE16-AB3C-11E9-9C8C-2A03E6697425","last_name":"Kleinhanns","first_name":"Tobias"},{"first_name":"Ying","last_name":"Xie","full_name":"Xie, Ying"},{"first_name":"Andreu","last_name":"Cabot","full_name":"Cabot, Andreu"}],"title":"Phosphorous incorporation in Pd2Sn alloys for electrocatalytic ethanol oxidation","date_updated":"2025-04-24T11:53:45Z"},{"publication_status":"published","year":"2020","article_processing_charge":"No","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2020-06-24T00:00:00Z","page":"13-31","isi":1,"type":"conference","oa":1,"publication":"Automated Reasoning","status":"public","month":"06","ddc":["000"],"abstract":[{"lang":"eng","text":"Fixed-point arithmetic is a popular alternative to floating-point arithmetic on embedded systems. Existing work on the verification of fixed-point programs relies on custom formalizations of fixed-point arithmetic, which makes it hard to compare the described techniques or reuse the implementations. In this paper, we address this issue by proposing and formalizing an SMT theory of fixed-point arithmetic. We present an intuitive yet comprehensive syntax of the fixed-point theory, and provide formal semantics for it based on rational arithmetic. We also describe two decision procedures for this theory: one based on the theory of bit-vectors and the other on the theory of reals. We implement the two decision procedures, and evaluate our implementations using existing mature SMT solvers on a benchmark suite we created. Finally, we perform a case study of using the theory we propose to verify properties of quantized neural networks."}],"date_created":"2020-08-02T22:00:59Z","alternative_title":["LNCS"],"publisher":"Springer Nature","language":[{"iso":"eng"}],"intvolume":"     12166","author":[{"first_name":"Marek","last_name":"Baranowski","full_name":"Baranowski, Marek"},{"last_name":"He","first_name":"Shaobo","full_name":"He, Shaobo"},{"first_name":"Mathias","last_name":"Lechner","full_name":"Lechner, Mathias","id":"3DC22916-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Thanh Son","last_name":"Nguyen","full_name":"Nguyen, Thanh Son"},{"full_name":"Rakamarić, Zvonimir","first_name":"Zvonimir","last_name":"Rakamarić"}],"title":"An SMT theory of fixed-point arithmetic","date_updated":"2026-06-18T19:31:14Z","day":"24","publication_identifier":{"eissn":["1611-3349"],"isbn":["9783030510732"],"issn":["0302-9743"]},"conference":{"name":"IJCAR: International Joint Conference on Automated Reasoning","location":"Paris, France","start_date":"2020-07-01","end_date":"2020-07-04"},"external_id":{"isi":["000884318000002"]},"_id":"8194","oa_version":"Published Version","quality_controlled":"1","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1007/978-3-030-51074-9_2"}],"department":[{"_id":"ToHe"}],"scopus_import":"1","volume":12166,"project":[{"grant_number":"Z211","name":"Formal methods for the design and analysis of complex systems","_id":"25F42A32-B435-11E9-9278-68D0E5697425","call_identifier":"FWF"}],"doi":"10.1007/978-3-030-51074-9_2","citation":{"ama":"Baranowski M, He S, Lechner M, Nguyen TS, Rakamarić Z. An SMT theory of fixed-point arithmetic. In: <i>Automated Reasoning</i>. Vol 12166. Springer Nature; 2020:13-31. doi:<a href=\"https://doi.org/10.1007/978-3-030-51074-9_2\">10.1007/978-3-030-51074-9_2</a>","ista":"Baranowski M, He S, Lechner M, Nguyen TS, Rakamarić Z. 2020. An SMT theory of fixed-point arithmetic. Automated Reasoning. IJCAR: International Joint Conference on Automated Reasoning, LNCS, vol. 12166, 13–31.","apa":"Baranowski, M., He, S., Lechner, M., Nguyen, T. S., &#38; Rakamarić, Z. (2020). An SMT theory of fixed-point arithmetic. In <i>Automated Reasoning</i> (Vol. 12166, pp. 13–31). Paris, France: Springer Nature. <a href=\"https://doi.org/10.1007/978-3-030-51074-9_2\">https://doi.org/10.1007/978-3-030-51074-9_2</a>","ieee":"M. Baranowski, S. He, M. Lechner, T. S. Nguyen, and Z. Rakamarić, “An SMT theory of fixed-point arithmetic,” in <i>Automated Reasoning</i>, Paris, France, 2020, vol. 12166, pp. 13–31.","mla":"Baranowski, Marek, et al. “An SMT Theory of Fixed-Point Arithmetic.” <i>Automated Reasoning</i>, vol. 12166, Springer Nature, 2020, pp. 13–31, doi:<a href=\"https://doi.org/10.1007/978-3-030-51074-9_2\">10.1007/978-3-030-51074-9_2</a>.","short":"M. Baranowski, S. He, M. Lechner, T.S. Nguyen, Z. Rakamarić, in:, Automated Reasoning, Springer Nature, 2020, pp. 13–31.","chicago":"Baranowski, Marek, Shaobo He, Mathias Lechner, Thanh Son Nguyen, and Zvonimir Rakamarić. “An SMT Theory of Fixed-Point Arithmetic.” In <i>Automated Reasoning</i>, 12166:13–31. Springer Nature, 2020. <a href=\"https://doi.org/10.1007/978-3-030-51074-9_2\">https://doi.org/10.1007/978-3-030-51074-9_2</a>."}},{"volume":12224,"scopus_import":"1","department":[{"_id":"ToHe"}],"tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"doi":"10.1007/978-3-030-53288-8_14","citation":{"mla":"Kragl, Bernhard, et al. “Refinement for Structured Concurrent Programs.” <i>Computer Aided Verification</i>, vol. 12224, Springer Nature, 2020, pp. 275–98, doi:<a href=\"https://doi.org/10.1007/978-3-030-53288-8_14\">10.1007/978-3-030-53288-8_14</a>.","ieee":"B. Kragl, S. Qadeer, and T. A. Henzinger, “Refinement for structured concurrent programs,” in <i>Computer Aided Verification</i>, 2020, vol. 12224, pp. 275–298.","ama":"Kragl B, Qadeer S, Henzinger TA. Refinement for structured concurrent programs. In: <i>Computer Aided Verification</i>. Vol 12224. Springer Nature; 2020:275-298. doi:<a href=\"https://doi.org/10.1007/978-3-030-53288-8_14\">10.1007/978-3-030-53288-8_14</a>","ista":"Kragl B, Qadeer S, Henzinger TA. 2020. Refinement for structured concurrent programs. Computer Aided Verification. , LNCS, vol. 12224, 275–298.","apa":"Kragl, B., Qadeer, S., &#38; Henzinger, T. A. (2020). Refinement for structured concurrent programs. In <i>Computer Aided Verification</i> (Vol. 12224, pp. 275–298). Springer Nature. <a href=\"https://doi.org/10.1007/978-3-030-53288-8_14\">https://doi.org/10.1007/978-3-030-53288-8_14</a>","chicago":"Kragl, Bernhard, Shaz Qadeer, and Thomas A Henzinger. “Refinement for Structured Concurrent Programs.” In <i>Computer Aided Verification</i>, 12224:275–98. Springer Nature, 2020. <a href=\"https://doi.org/10.1007/978-3-030-53288-8_14\">https://doi.org/10.1007/978-3-030-53288-8_14</a>.","short":"B. Kragl, S. Qadeer, T.A. Henzinger, in:, Computer Aided Verification, Springer Nature, 2020, pp. 275–298."},"project":[{"grant_number":"Z211","name":"Formal methods for the design and analysis of complex systems","_id":"25F42A32-B435-11E9-9278-68D0E5697425","call_identifier":"FWF"}],"quality_controlled":"1","oa_version":"Published Version","_id":"8195","file_date_updated":"2020-08-06T08:14:54Z","related_material":{"record":[{"id":"8332","relation":"dissertation_contains","status":"public"}]},"publication_identifier":{"issn":["0302-9743"],"isbn":["9783030532871"],"eisbn":["9783030532888"],"eissn":["1611-3349"]},"acknowledgement":"Bernhard Kragl and Thomas A. Henzinger were supported by\r\nthe Austrian Science Fund (FWF) under grant Z211-N23 (Wittgenstein Award).","day":"14","external_id":{"isi":["000695276000014"]},"author":[{"first_name":"Bernhard","orcid":"0000-0001-7745-9117","last_name":"Kragl","id":"320FC952-F248-11E8-B48F-1D18A9856A87","full_name":"Kragl, Bernhard"},{"first_name":"Shaz","last_name":"Qadeer","full_name":"Qadeer, Shaz"},{"first_name":"Thomas A","last_name":"Henzinger","orcid":"0000-0002-2985-7724","full_name":"Henzinger, Thomas A","id":"40876CD8-F248-11E8-B48F-1D18A9856A87"}],"date_updated":"2026-04-08T07:23:52Z","title":"Refinement for structured concurrent programs","publisher":"Springer Nature","alternative_title":["LNCS"],"date_created":"2020-08-03T11:45:35Z","abstract":[{"text":"This paper presents a foundation for refining concurrent programs with structured control flow. The verification problem is decomposed into subproblems that aid interactive program development, proof reuse, and automation. The formalization in this paper is the basis of a new design and implementation of the Civl verifier.","lang":"eng"}],"has_accepted_license":"1","intvolume":"     12224","language":[{"iso":"eng"}],"publication":"Computer Aided Verification","status":"public","month":"07","corr_author":"1","ddc":["000"],"page":"275-298","oa":1,"isi":1,"type":"conference","file":[{"date_updated":"2020-08-06T08:14:54Z","success":1,"file_id":"8201","file_size":804237,"content_type":"application/pdf","access_level":"open_access","relation":"main_file","date_created":"2020-08-06T08:14:54Z","creator":"dernst","file_name":"2020_LNCS_Kragl.pdf"}],"year":"2020","article_processing_charge":"No","publication_status":"published","date_published":"2020-07-14T00:00:00Z","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1"},{"external_id":{"isi":["000557362300008"]},"publication_identifier":{"issn":["2542-4653"]},"article_type":"original","file_date_updated":"2020-08-06T08:56:06Z","acknowledgement":"N.L., T.G. and E.B. acknowledge support from the European Research Council (ERC) under\r\nthe European Union Horizon 2020 Research and Innovation Programme (Grant Agreement\r\nNo. 639172). T.G. was in part supported by an Aly Kaufman Fellowship at the Technion. T.G.\r\nacknowledges funding from the Institute of Science and Technology (IST) Austria, and from\r\nthe European Union’s Horizon 2020 research and innovation programme under the Marie\r\nSkłodowska-Curie Grant Agreement No. 754411. N.L. acknowledges support from the People Programme (Marie Curie Actions) of the European Unions Seventh Framework 546 Programme (FP7/20072013), under REA Grant Agreement No. 631696, and by the Israeli Center\r\nof Research Excellence (I-CORE) Circle of Light funded by the Israel Science Foundation (Grant\r\nNo. 1802/12). M.R. gratefully acknowledges the support of the European Research Council\r\n(ERC) under the European Union Horizon 2020 Research and Innovation Programme (Grant\r\nAgreement No. 678862). M.R. acknowledges the support of the Villum Foundation. M.R. and\r\nE.B. acknowledge support from CRC 183 of the Deutsche Forschungsgemeinschaft","day":"29","date_updated":"2025-04-14T07:44:05Z","title":"Exponentially long lifetime of universal quasi-steady states in topological Floquet pumps","author":[{"full_name":"Gulden, Tobias","id":"1083E038-9F73-11E9-A4B5-532AE6697425","first_name":"Tobias","last_name":"Gulden","orcid":"0000-0001-6814-7541"},{"first_name":"Erez","last_name":"Berg","full_name":"Berg, Erez"},{"full_name":"Rudner, Mark Spencer","first_name":"Mark Spencer","last_name":"Rudner"},{"first_name":"Netanel","last_name":"Lindner","full_name":"Lindner, Netanel"}],"tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"doi":"10.21468/scipostphys.9.1.015","citation":{"short":"T. Gulden, E. Berg, M.S. Rudner, N. Lindner, SciPost Physics 9 (2020).","chicago":"Gulden, Tobias, Erez Berg, Mark Spencer Rudner, and Netanel Lindner. “Exponentially Long Lifetime of Universal Quasi-Steady States in Topological Floquet Pumps.” <i>SciPost Physics</i>. SciPost Foundation, 2020. <a href=\"https://doi.org/10.21468/scipostphys.9.1.015\">https://doi.org/10.21468/scipostphys.9.1.015</a>.","apa":"Gulden, T., Berg, E., Rudner, M. S., &#38; Lindner, N. (2020). Exponentially long lifetime of universal quasi-steady states in topological Floquet pumps. <i>SciPost Physics</i>. SciPost Foundation. <a href=\"https://doi.org/10.21468/scipostphys.9.1.015\">https://doi.org/10.21468/scipostphys.9.1.015</a>","ista":"Gulden T, Berg E, Rudner MS, Lindner N. 2020. Exponentially long lifetime of universal quasi-steady states in topological Floquet pumps. SciPost Physics. 9, 015.","ama":"Gulden T, Berg E, Rudner MS, Lindner N. Exponentially long lifetime of universal quasi-steady states in topological Floquet pumps. <i>SciPost Physics</i>. 2020;9. doi:<a href=\"https://doi.org/10.21468/scipostphys.9.1.015\">10.21468/scipostphys.9.1.015</a>","ieee":"T. Gulden, E. Berg, M. S. Rudner, and N. Lindner, “Exponentially long lifetime of universal quasi-steady states in topological Floquet pumps,” <i>SciPost Physics</i>, vol. 9. SciPost Foundation, 2020.","mla":"Gulden, Tobias, et al. “Exponentially Long Lifetime of Universal Quasi-Steady States in Topological Floquet Pumps.” <i>SciPost Physics</i>, vol. 9, 015, SciPost Foundation, 2020, doi:<a href=\"https://doi.org/10.21468/scipostphys.9.1.015\">10.21468/scipostphys.9.1.015</a>."},"project":[{"_id":"260C2330-B435-11E9-9278-68D0E5697425","call_identifier":"H2020","grant_number":"754411","name":"ISTplus - Postdoctoral Fellowships"}],"volume":9,"department":[{"_id":"MaSe"}],"scopus_import":"1","quality_controlled":"1","oa_version":"Published Version","_id":"8199","oa":1,"type":"journal_article","ec_funded":1,"isi":1,"article_number":"015","date_published":"2020-07-29T00:00:00Z","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","file":[{"content_type":"application/pdf","access_level":"open_access","file_size":531137,"creator":"dernst","file_name":"2020_SciPostPhys_Gulden.pdf","relation":"main_file","date_created":"2020-08-06T08:56:06Z","date_updated":"2020-08-06T08:56:06Z","success":1,"file_id":"8202"}],"year":"2020","article_processing_charge":"No","publication_status":"published","intvolume":"         9","language":[{"iso":"eng"}],"publisher":"SciPost Foundation","abstract":[{"lang":"eng","text":"We investigate a mechanism to transiently stabilize topological phenomena in long-lived quasi-steady states of isolated quantum many-body systems driven at low frequencies. We obtain an analytical bound for the lifetime of the quasi-steady states which is exponentially large in the inverse driving frequency. Within this lifetime, the quasi-steady state is characterized by maximum entropy subject to the constraint of fixed number of particles in the system's Floquet-Bloch bands. In such a state, all the non-universal properties of these bands are washed out, hence only the topological properties persist."}],"has_accepted_license":"1","date_created":"2020-08-04T13:04:15Z","month":"07","status":"public","corr_author":"1","ddc":["530"],"publication":"SciPost Physics"}]