[{"tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"creator":"system","file_size":1841650,"date_created":"2018-12-12T10:17:32Z","access_level":"open_access","checksum":"99ceee57549dc0461e3adfc037ec70a9","relation":"main_file","file_id":"5287","date_updated":"2020-07-14T12:47:58Z","file_name":"IST-2017-915-v1+1_s41467-017-01191-2.pdf","content_type":"application/pdf"}],"date_updated":"2025-07-10T11:54:38Z","department":[{"_id":"RySh"}],"publication_status":"published","type":"journal_article","has_accepted_license":"1","date_published":"2017-12-01T00:00:00Z","pubrep_id":"915","language":[{"iso":"eng"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Published Version","date_created":"2018-12-11T11:48:17Z","intvolume":"         8","quality_controlled":"1","citation":{"chicago":"Aloisi, Elisabetta, Katy Le Corf, Julien Dupuis, Pei Zhang, Melanie Ginger, Virginie Labrousse, Michela Spatuzza, et al. “Altered Surface MGluR5 Dynamics Provoke Synaptic NMDAR Dysfunction and Cognitive Defects in Fmr1 Knockout Mice.” <i>Nature Communications</i>. Nature Publishing Group, 2017. <a href=\"https://doi.org/10.1038/s41467-017-01191-2\">https://doi.org/10.1038/s41467-017-01191-2</a>.","ama":"Aloisi E, Le Corf K, Dupuis J, et al. Altered surface mGluR5 dynamics provoke synaptic NMDAR dysfunction and cognitive defects in Fmr1 knockout mice. <i>Nature Communications</i>. 2017;8(1). doi:<a href=\"https://doi.org/10.1038/s41467-017-01191-2\">10.1038/s41467-017-01191-2</a>","ista":"Aloisi E, Le Corf K, Dupuis J, Zhang P, Ginger M, Labrousse V, Spatuzza M, Georg Haberl M, Costa L, Shigemoto R, Tappe Theodor A, Drago F, Vincenzo Piazza P, Mulle C, Groc L, Ciranna L, Catania M, Frick A. 2017. Altered surface mGluR5 dynamics provoke synaptic NMDAR dysfunction and cognitive defects in Fmr1 knockout mice. Nature Communications. 8(1), 1103.","apa":"Aloisi, E., Le Corf, K., Dupuis, J., Zhang, P., Ginger, M., Labrousse, V., … Frick, A. (2017). Altered surface mGluR5 dynamics provoke synaptic NMDAR dysfunction and cognitive defects in Fmr1 knockout mice. <i>Nature Communications</i>. Nature Publishing Group. <a href=\"https://doi.org/10.1038/s41467-017-01191-2\">https://doi.org/10.1038/s41467-017-01191-2</a>","mla":"Aloisi, Elisabetta, et al. “Altered Surface MGluR5 Dynamics Provoke Synaptic NMDAR Dysfunction and Cognitive Defects in Fmr1 Knockout Mice.” <i>Nature Communications</i>, vol. 8, no. 1, 1103, Nature Publishing Group, 2017, doi:<a href=\"https://doi.org/10.1038/s41467-017-01191-2\">10.1038/s41467-017-01191-2</a>.","ieee":"E. Aloisi <i>et al.</i>, “Altered surface mGluR5 dynamics provoke synaptic NMDAR dysfunction and cognitive defects in Fmr1 knockout mice,” <i>Nature Communications</i>, vol. 8, no. 1. Nature Publishing Group, 2017.","short":"E. Aloisi, K. Le Corf, J. Dupuis, P. Zhang, M. Ginger, V. Labrousse, M. Spatuzza, M. Georg Haberl, L. Costa, R. Shigemoto, A. Tappe Theodor, F. Drago, P. Vincenzo Piazza, C. Mulle, L. Groc, L. Ciranna, M. Catania, A. Frick, Nature Communications 8 (2017)."},"external_id":{"isi":["000413571300004"]},"issue":"1","publist_id":"6921","volume":8,"fulldoi":"https://doi.org/10.1038/s41467-017-01191-2","ddc":["571"],"doi":"10.1038/s41467-017-01191-2","file_date_updated":"2020-07-14T12:47:58Z","publisher":"Nature Publishing Group","publication_identifier":{"issn":["2041-1723"]},"day":"01","publication":"Nature Communications","_id":"746","status":"public","month":"12","year":"2017","article_processing_charge":"No","oa":1,"scopus_import":"1","title":"Altered surface mGluR5 dynamics provoke synaptic NMDAR dysfunction and cognitive defects in Fmr1 knockout mice","isi":1,"article_number":"1103","abstract":[{"text":"Metabotropic glutamate receptor subtype 5 (mGluR5) is crucially implicated in the pathophysiology of Fragile X Syndrome (FXS); however, its dysfunction at the sub-cellular level, and related synaptic and cognitive phenotypes are unexplored. Here, we probed the consequences of mGluR5/Homer scaffold disruption for mGluR5 cell-surface mobility, synaptic N-methyl-D-Aspartate receptor (NMDAR) function, and behavioral phenotypes in the second-generation Fmr1 knockout (KO) mouse. Using single-molecule tracking, we found that mGluR5 was significantly more mobile at synapses in hippocampal Fmr1 KO neurons, causing an increased synaptic surface co-clustering of mGluR5 and NMDAR. This correlated with a reduced amplitude of synaptic NMDAR currents, a lack of their mGluR5-Activated long-Term depression, and NMDAR/hippocampus dependent cognitive deficits. These synaptic and behavioral phenomena were reversed by knocking down Homer1a in Fmr1 KO mice. Our study provides a mechanistic link between changes of mGluR5 dynamics and pathological phenotypes of FXS, unveiling novel targets for mGluR5-based therapeutics.","lang":"eng"}],"author":[{"first_name":"Elisabetta","full_name":"Aloisi, Elisabetta","last_name":"Aloisi"},{"last_name":"Le Corf","full_name":"Le Corf, Katy","first_name":"Katy"},{"last_name":"Dupuis","first_name":"Julien","full_name":"Dupuis, Julien"},{"first_name":"Pei","full_name":"Zhang, Pei","last_name":"Zhang"},{"last_name":"Ginger","first_name":"Melanie","full_name":"Ginger, Melanie"},{"first_name":"Virginie","full_name":"Labrousse, Virginie","last_name":"Labrousse"},{"first_name":"Michela","full_name":"Spatuzza, Michela","last_name":"Spatuzza"},{"last_name":"Georg Haberl","full_name":"Georg Haberl, Matthias","first_name":"Matthias"},{"last_name":"Costa","full_name":"Costa, Lara","first_name":"Lara"},{"orcid":"0000-0001-8761-9444","first_name":"Ryuichi","full_name":"Shigemoto, Ryuichi","id":"499F3ABC-F248-11E8-B48F-1D18A9856A87","last_name":"Shigemoto"},{"last_name":"Tappe Theodor","full_name":"Tappe Theodor, Anke","first_name":"Anke"},{"full_name":"Drago, Fillippo","first_name":"Fillippo","last_name":"Drago"},{"full_name":"Vincenzo Piazza, Pier","first_name":"Pier","last_name":"Vincenzo Piazza"},{"last_name":"Mulle","full_name":"Mulle, Christophe","first_name":"Christophe"},{"last_name":"Groc","full_name":"Groc, Laurent","first_name":"Laurent"},{"last_name":"Ciranna","full_name":"Ciranna, Lucia","first_name":"Lucia"},{"full_name":"Catania, Maria","first_name":"Maria","last_name":"Catania"},{"first_name":"Andreas","full_name":"Frick, Andreas","last_name":"Frick"}]},{"author":[{"first_name":"Eugen","full_name":"Brǎiloiu, Eugen","last_name":"Brǎiloiu"},{"full_name":"Mcguire, Matthew","first_name":"Matthew","last_name":"Mcguire"},{"last_name":"Shuler","full_name":"Shuler, Shadaria","first_name":"Shadaria"},{"last_name":"Deliu","first_name":"Elena","orcid":"0000-0002-7370-5293","full_name":"Deliu, Elena","id":"37A40D7E-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Barr","full_name":"Barr, Jeffrey","first_name":"Jeffrey"},{"last_name":"Abood","first_name":"Mary","full_name":"Abood, Mary"},{"full_name":"Brailoiu, Gabriela","first_name":"Gabriela","last_name":"Brailoiu"}],"pmid":1,"abstract":[{"lang":"eng","text":"Bradykinin (BK), a component of the kallikrein-kininogen-kinin system exerts multiple effects via B1 and B2 receptor activation. In the cardiovascular system, bradykinin has cardioprotective and vasodilator properties. We investigated the effect of BK on cardiac-projecting neurons of nucleus ambiguus, a key site for the parasympathetic cardiac regulation. BK produced a dose-dependent increase in cytosolic Ca2+ concentration. Pretreatment with HOE140, a B2 receptor antagonist, but not with R715, a B1 receptor antagonist, abolished the response to BK. A selective B2 receptor agonist, but not a B1 receptor agonist, elicited an increase in cytosolic Ca2+ similarly to BK. Inhibition of N-type voltage-gated Ca2+ channels with ω-conotoxin GVIA had no effect on the Ca2+ signal produced by BK, while pretreatment with ω-conotoxin MVIIC, a blocker of P/Q-type of Ca2+ channels, significantly diminished the effect of BK. Pretreatment with xestospongin C and 2-aminoethoxydiphenyl borate, antagonists of inositol 1,4,5-trisphosphate receptors, abolished the response to BK. Inhibition of ryanodine receptors reduced the BK-induced Ca2+ increase, while disruption of lysosomal Ca2+ stores with bafilomycin A1 did not affect the response. BK produced a dose-dependent depolarization of nucleus ambiguus neurons, which was prevented by the B2 receptor antagonist. In vivo studies indicate that microinjection of BK into nucleus ambiguus elicited bradycardia in conscious rats via B2 receptors. In summary, in cardiac vagal neurons of nucleus ambiguus, BK activates B2 receptors promoting Ca2+ influx and Ca2+ release from endoplasmic reticulum, and membrane depolarization; these effects are translated in vivo by bradycardia."}],"isi":1,"title":"Modulation of cardiac vagal tone by bradykinin acting on nucleus ambiguus","scopus_import":"1","oa":1,"article_processing_charge":"No","year":"2017","month":"12","_id":"747","status":"public","publication":"Neuroscience","day":"04","publication_identifier":{"issn":["0306-4522"]},"publisher":"Elsevier","doi":"10.1016/j.neuroscience.2017.09.034","fulldoi":"https://doi.org/10.1016/j.neuroscience.2017.09.034","volume":365,"publist_id":"6911","main_file_link":[{"url":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5798458","open_access":"1"}],"external_id":{"isi":["000415966200003"],"pmid":["28951324"]},"page":"23 - 32","citation":{"chicago":"Brǎiloiu, Eugen, Matthew Mcguire, Shadaria Shuler, Elena Deliu, Jeffrey Barr, Mary Abood, and Gabriela Brailoiu. “Modulation of Cardiac Vagal Tone by Bradykinin Acting on Nucleus Ambiguus.” <i>Neuroscience</i>. Elsevier, 2017. <a href=\"https://doi.org/10.1016/j.neuroscience.2017.09.034\">https://doi.org/10.1016/j.neuroscience.2017.09.034</a>.","ieee":"E. Brǎiloiu <i>et al.</i>, “Modulation of cardiac vagal tone by bradykinin acting on nucleus ambiguus,” <i>Neuroscience</i>, vol. 365. Elsevier, pp. 23–32, 2017.","short":"E. Brǎiloiu, M. Mcguire, S. Shuler, E. Deliu, J. Barr, M. Abood, G. Brailoiu, Neuroscience 365 (2017) 23–32.","ama":"Brǎiloiu E, Mcguire M, Shuler S, et al. Modulation of cardiac vagal tone by bradykinin acting on nucleus ambiguus. <i>Neuroscience</i>. 2017;365:23-32. doi:<a href=\"https://doi.org/10.1016/j.neuroscience.2017.09.034\">10.1016/j.neuroscience.2017.09.034</a>","ista":"Brǎiloiu E, Mcguire M, Shuler S, Deliu E, Barr J, Abood M, Brailoiu G. 2017. Modulation of cardiac vagal tone by bradykinin acting on nucleus ambiguus. Neuroscience. 365, 23–32.","mla":"Brǎiloiu, Eugen, et al. “Modulation of Cardiac Vagal Tone by Bradykinin Acting on Nucleus Ambiguus.” <i>Neuroscience</i>, vol. 365, Elsevier, 2017, pp. 23–32, doi:<a href=\"https://doi.org/10.1016/j.neuroscience.2017.09.034\">10.1016/j.neuroscience.2017.09.034</a>.","apa":"Brǎiloiu, E., Mcguire, M., Shuler, S., Deliu, E., Barr, J., Abood, M., &#38; Brailoiu, G. (2017). Modulation of cardiac vagal tone by bradykinin acting on nucleus ambiguus. <i>Neuroscience</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.neuroscience.2017.09.034\">https://doi.org/10.1016/j.neuroscience.2017.09.034</a>"},"intvolume":"       365","quality_controlled":"1","date_created":"2018-12-11T11:48:17Z","oa_version":"Submitted Version","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","language":[{"iso":"eng"}],"date_published":"2017-12-04T00:00:00Z","type":"journal_article","publication_status":"published","department":[{"_id":"GaNo"}],"date_updated":"2026-04-16T10:04:53Z","article_type":"original"},{"publication_status":"published","department":[{"_id":"PeJo"}],"date_updated":"2026-04-08T14:09:28Z","tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"access_level":"open_access","date_created":"2018-12-12T10:09:14Z","creator":"system","file_size":2759195,"file_name":"IST-2017-874-v1+1_PIIS2211124717316029.pdf","content_type":"application/pdf","date_updated":"2020-07-14T12:47:59Z","relation":"main_file","checksum":"a6afa3764909bf6edafa07982d8e1cee","file_id":"4737"}],"quality_controlled":"1","intvolume":"        21","language":[{"iso":"eng"}],"pubrep_id":"874","date_created":"2018-12-11T11:48:18Z","oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2017-11-21T00:00:00Z","type":"journal_article","has_accepted_license":"1","ec_funded":1,"issue":"8","citation":{"ista":"Chen C, Satterfield R, Young S, Jonas PM. 2017. Triple function of Synaptotagmin 7 ensures efficiency of high-frequency transmission at central GABAergic synapses. Cell Reports. 21(8), 2082–2089.","ama":"Chen C, Satterfield R, Young S, Jonas PM. Triple function of Synaptotagmin 7 ensures efficiency of high-frequency transmission at central GABAergic synapses. <i>Cell Reports</i>. 2017;21(8):2082-2089. doi:<a href=\"https://doi.org/10.1016/j.celrep.2017.10.122\">10.1016/j.celrep.2017.10.122</a>","apa":"Chen, C., Satterfield, R., Young, S., &#38; Jonas, P. M. (2017). Triple function of Synaptotagmin 7 ensures efficiency of high-frequency transmission at central GABAergic synapses. <i>Cell Reports</i>. Cell Press. <a href=\"https://doi.org/10.1016/j.celrep.2017.10.122\">https://doi.org/10.1016/j.celrep.2017.10.122</a>","mla":"Chen, Chong, et al. “Triple Function of Synaptotagmin 7 Ensures Efficiency of High-Frequency Transmission at Central GABAergic Synapses.” <i>Cell Reports</i>, vol. 21, no. 8, Cell Press, 2017, pp. 2082–89, doi:<a href=\"https://doi.org/10.1016/j.celrep.2017.10.122\">10.1016/j.celrep.2017.10.122</a>.","ieee":"C. Chen, R. Satterfield, S. Young, and P. M. Jonas, “Triple function of Synaptotagmin 7 ensures efficiency of high-frequency transmission at central GABAergic synapses,” <i>Cell Reports</i>, vol. 21, no. 8. Cell Press, pp. 2082–2089, 2017.","short":"C. Chen, R. Satterfield, S. Young, P.M. Jonas, Cell Reports 21 (2017) 2082–2089.","chicago":"Chen, Chong, Rachel Satterfield, Samuel Young, and Peter M Jonas. “Triple Function of Synaptotagmin 7 Ensures Efficiency of High-Frequency Transmission at Central GABAergic Synapses.” <i>Cell Reports</i>. Cell Press, 2017. <a href=\"https://doi.org/10.1016/j.celrep.2017.10.122\">https://doi.org/10.1016/j.celrep.2017.10.122</a>."},"page":"2082 - 2089","external_id":{"isi":["000416216700007"]},"project":[{"call_identifier":"FWF","grant_number":"P24909-B24","name":"Mechanisms of transmitter release at GABAergic synapses","_id":"25C26B1E-B435-11E9-9278-68D0E5697425"},{"name":"Biophysics and circuit function of a giant cortical glutamatergic synapse","grant_number":"692692","_id":"25B7EB9E-B435-11E9-9278-68D0E5697425","call_identifier":"H2020"}],"volume":21,"publist_id":"6907","day":"21","publication_identifier":{"issn":["2211-1247"]},"file_date_updated":"2020-07-14T12:47:59Z","doi":"10.1016/j.celrep.2017.10.122","publisher":"Cell Press","ddc":["570","571"],"fulldoi":"https://doi.org/10.1016/j.celrep.2017.10.122","scopus_import":"1","title":"Triple function of Synaptotagmin 7 ensures efficiency of high-frequency transmission at central GABAergic synapses","article_processing_charge":"No","oa":1,"_id":"749","status":"public","month":"11","year":"2017","publication":"Cell Reports","isi":1,"corr_author":"1","acknowledged_ssus":[{"_id":"PreCl"}],"author":[{"id":"3DFD581A-F248-11E8-B48F-1D18A9856A87","full_name":"Chen, Chong","first_name":"Chong","last_name":"Chen"},{"last_name":"Satterfield","first_name":"Rachel","full_name":"Satterfield, Rachel"},{"full_name":"Young, Samuel","first_name":"Samuel","last_name":"Young"},{"orcid":"0000-0001-5001-4804","first_name":"Peter M","id":"353C1B58-F248-11E8-B48F-1D18A9856A87","full_name":"Jonas, Peter M","last_name":"Jonas"}],"related_material":{"record":[{"status":"public","relation":"dissertation_contains","id":"324"}]},"abstract":[{"lang":"eng","text":"Synaptotagmin 7 (Syt7) is thought to be a Ca2+ sensor that mediates asynchronous transmitter release and facilitation at synapses. However, Syt7 is strongly expressed in fast-spiking, parvalbumin-expressing GABAergic interneurons, and the output synapses of these neurons produce only minimal asynchronous release and show depression rather than facilitation. To resolve this apparent contradiction, we examined the effects of genetic elimination of Syt7 on synaptic transmission at the GABAergic basket cell (BC)-Purkinje cell (PC) synapse in cerebellum. Our results indicate that at the BC-PC synapse, Syt7 contributes to asynchronous release, pool replenishment, and facilitation. In combination, these three effects ensure efficient transmitter release during high-frequency activity and guarantee frequency independence of inhibition. Our results identify a distinct function of Syt7: ensuring the efficiency of high-frequency inhibitory synaptic transmission"}]},{"day":"09","publication_identifier":{"issn":["09609822"]},"publisher":"Cell Press","file_date_updated":"2020-07-14T12:47:59Z","doi":"10.1016/j.cub.2017.10.001","ddc":["570","576"],"fulldoi":"https://doi.org/10.1016/j.cub.2017.10.001","title":"A moving source of matrix components is essential for De Novo basement membrane formation","scopus_import":"1","oa":1,"article_processing_charge":"No","year":"2017","_id":"751","month":"11","status":"public","publication":"Current Biology","isi":1,"author":[{"full_name":"Matsubayashi, Yutaka","first_name":"Yutaka","last_name":"Matsubayashi"},{"last_name":"Louani","full_name":"Louani, Adam","first_name":"Adam"},{"first_name":"Anca","full_name":"Dragu, Anca","last_name":"Dragu"},{"full_name":"Sanchez Sanchez, Besaiz","first_name":"Besaiz","last_name":"Sanchez Sanchez"},{"last_name":"Serna Morales","full_name":"Serna Morales, Eduardo","first_name":"Eduardo"},{"last_name":"Yolland","first_name":"Lawrence","full_name":"Yolland, Lawrence"},{"last_name":"György","full_name":"György, Attila","id":"3BCEDBE0-F248-11E8-B48F-1D18A9856A87","first_name":"Attila","orcid":"0000-0002-1819-198X"},{"full_name":"Vizcay, Gema","first_name":"Gema","last_name":"Vizcay"},{"first_name":"Roland","full_name":"Fleck, Roland","last_name":"Fleck"},{"last_name":"Heddleston","first_name":"John","full_name":"Heddleston, John"},{"first_name":"Teng","full_name":"Chew, Teng","last_name":"Chew"},{"full_name":"Siekhaus, Daria E","id":"3D224B9E-F248-11E8-B48F-1D18A9856A87","first_name":"Daria E","orcid":"0000-0001-8323-8353","last_name":"Siekhaus"},{"full_name":"Stramer, Brian","first_name":"Brian","last_name":"Stramer"}],"abstract":[{"text":"The basement membrane (BM) is a thin layer of extracellular matrix (ECM) beneath nearly all epithelial cell types that is critical for cellular and tissue function. It is composed of numerous components conserved among all bilaterians [1]; however, it is unknown how all of these components are generated and subsequently constructed to form a fully mature BM in the living animal. Although BM formation is thought to simply involve a process of self-assembly [2], this concept suffers from a number of logistical issues when considering its construction in vivo. First, incorporation of BM components appears to be hierarchical [3-5], yet it is unclear whether their production during embryogenesis must also be regulated in a temporal fashion. Second, many BM proteins are produced not only by the cells residing on the BM but also by surrounding cell types [6-9], and it is unclear how large, possibly insoluble protein complexes [10] are delivered into the matrix. Here we exploit our ability to live image and genetically dissect de novo BM formation during Drosophila development. This reveals that there is a temporal hierarchy of BM protein production that is essential for proper component incorporation. Furthermore, we show that BM components require secretion by migrating macrophages (hemocytes) during their developmental dispersal, which is critical for embryogenesis. Indeed, hemocyte migration is essential to deliver a subset of ECM components evenly throughout the embryo. This reveals that de novo BM construction requires a combination of both production and distribution logistics allowing for the timely delivery of core components.","lang":"eng"}],"publication_status":"published","department":[{"_id":"DaSi"}],"date_updated":"2023-09-27T12:25:31Z","file":[{"file_size":4770657,"creator":"system","date_created":"2018-12-12T10:09:45Z","access_level":"open_access","file_id":"4770","checksum":"264cf6c6c3551486ba5ea786850e000a","relation":"main_file","date_updated":"2020-07-14T12:47:59Z","content_type":"application/pdf","file_name":"IST-2017-875-v1+1_1-s2.0-S0960982217312691-main.pdf"}],"tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"intvolume":"        27","quality_controlled":"1","oa_version":"Published Version","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","date_created":"2018-12-11T11:48:18Z","language":[{"iso":"eng"}],"pubrep_id":"875","date_published":"2017-11-09T00:00:00Z","has_accepted_license":"1","type":"journal_article","issue":"22","external_id":{"isi":["000415815800031"]},"page":"3526 - 3534e.4","citation":{"chicago":"Matsubayashi, Yutaka, Adam Louani, Anca Dragu, Besaiz Sanchez Sanchez, Eduardo Serna Morales, Lawrence Yolland, Attila György, et al. “A Moving Source of Matrix Components Is Essential for De Novo Basement Membrane Formation.” <i>Current Biology</i>. Cell Press, 2017. <a href=\"https://doi.org/10.1016/j.cub.2017.10.001\">https://doi.org/10.1016/j.cub.2017.10.001</a>.","short":"Y. Matsubayashi, A. Louani, A. Dragu, B. Sanchez Sanchez, E. Serna Morales, L. Yolland, A. György, G. Vizcay, R. Fleck, J. Heddleston, T. Chew, D.E. Siekhaus, B. Stramer, Current Biology 27 (2017) 3526–3534e.4.","ieee":"Y. Matsubayashi <i>et al.</i>, “A moving source of matrix components is essential for De Novo basement membrane formation,” <i>Current Biology</i>, vol. 27, no. 22. Cell Press, p. 3526–3534e.4, 2017.","mla":"Matsubayashi, Yutaka, et al. “A Moving Source of Matrix Components Is Essential for De Novo Basement Membrane Formation.” <i>Current Biology</i>, vol. 27, no. 22, Cell Press, 2017, p. 3526–3534e.4, doi:<a href=\"https://doi.org/10.1016/j.cub.2017.10.001\">10.1016/j.cub.2017.10.001</a>.","apa":"Matsubayashi, Y., Louani, A., Dragu, A., Sanchez Sanchez, B., Serna Morales, E., Yolland, L., … Stramer, B. (2017). A moving source of matrix components is essential for De Novo basement membrane formation. <i>Current Biology</i>. Cell Press. <a href=\"https://doi.org/10.1016/j.cub.2017.10.001\">https://doi.org/10.1016/j.cub.2017.10.001</a>","ista":"Matsubayashi Y, Louani A, Dragu A, Sanchez Sanchez B, Serna Morales E, Yolland L, György A, Vizcay G, Fleck R, Heddleston J, Chew T, Siekhaus DE, Stramer B. 2017. A moving source of matrix components is essential for De Novo basement membrane formation. Current Biology. 27(22), 3526–3534e.4.","ama":"Matsubayashi Y, Louani A, Dragu A, et al. A moving source of matrix components is essential for De Novo basement membrane formation. <i>Current Biology</i>. 2017;27(22):3526-3534e.4. doi:<a href=\"https://doi.org/10.1016/j.cub.2017.10.001\">10.1016/j.cub.2017.10.001</a>"},"volume":27,"publist_id":"6905"},{"author":[{"last_name":"Pleska","first_name":"Maros","orcid":"0000-0001-7460-7479","full_name":"Pleska, Maros","id":"4569785E-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Guet","first_name":"Calin C","orcid":"0000-0001-6220-2052","full_name":"Guet, Calin C","id":"47F8433E-F248-11E8-B48F-1D18A9856A87"}],"abstract":[{"text":"information on culture conditions, phage mutagenesis, verification and lysate preparation; Raw data","lang":"eng"}],"related_material":{"record":[{"relation":"used_in_publication","id":"561","status":"public"}]},"citation":{"chicago":"Pleska, Maros, and Calin C Guet. “Supplementary Materials and Methods; Full Data Set from Effects of Mutations in Phage Restriction Sites during Escape from Restriction–Modification.” The Royal Society, 2017. <a href=\"https://doi.org/10.6084/m9.figshare.5633917.v1\">https://doi.org/10.6084/m9.figshare.5633917.v1</a>.","ieee":"M. Pleska and C. C. Guet, “Supplementary materials and methods; Full data set from effects of mutations in phage restriction sites during escape from restriction–modification.” The Royal Society, 2017.","short":"M. Pleska, C.C. Guet, (2017).","ista":"Pleska M, Guet CC. 2017. Supplementary materials and methods; Full data set from effects of mutations in phage restriction sites during escape from restriction–modification, The Royal Society, <a href=\"https://doi.org/10.6084/m9.figshare.5633917.v1\">10.6084/m9.figshare.5633917.v1</a>.","ama":"Pleska M, Guet CC. Supplementary materials and methods; Full data set from effects of mutations in phage restriction sites during escape from restriction–modification. 2017. doi:<a href=\"https://doi.org/10.6084/m9.figshare.5633917.v1\">10.6084/m9.figshare.5633917.v1</a>","apa":"Pleska, M., &#38; Guet, C. C. (2017). Supplementary materials and methods; Full data set from effects of mutations in phage restriction sites during escape from restriction–modification. The Royal Society. <a href=\"https://doi.org/10.6084/m9.figshare.5633917.v1\">https://doi.org/10.6084/m9.figshare.5633917.v1</a>","mla":"Pleska, Maros, and Calin C. Guet. <i>Supplementary Materials and Methods; Full Data Set from Effects of Mutations in Phage Restriction Sites during Escape from Restriction–Modification</i>. The Royal Society, 2017, doi:<a href=\"https://doi.org/10.6084/m9.figshare.5633917.v1\">10.6084/m9.figshare.5633917.v1</a>."},"main_file_link":[{"open_access":"1","url":"https://doi.org/10.6084/m9.figshare.5633917.v1"}],"corr_author":"1","date_created":"2021-08-09T13:54:38Z","user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","oa":1,"oa_version":"Published Version","article_processing_charge":"No","title":"Supplementary materials and methods; Full data set from effects of mutations in phage restriction sites during escape from restriction–modification","type":"research_data_reference","year":"2017","date_published":"2017-11-27T00:00:00Z","_id":"9847","month":"11","status":"public","date_updated":"2026-06-18T18:54:19Z","department":[{"_id":"CaGu"}],"day":"27","fulldoi":"https://doi.org/10.6084/m9.figshare.5633917.v1","publisher":"The Royal Society","doi":"10.6084/m9.figshare.5633917.v1"},{"type":"research_data_reference","year":"2017","_id":"9859","status":"public","date_published":"2017-04-26T00:00:00Z","month":"04","oa_version":"Published Version","user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","date_created":"2021-08-10T07:59:02Z","oa":1,"article_processing_charge":"No","title":"Additional file 1: Table S1. of Oral immune priming with Bacillus thuringiensis induces a shift in the gene expression of Tribolium castaneum larvae","fulldoi":"https://doi.org/10.6084/m9.figshare.c.3756974_d1.v1","publisher":"Springer Nature","doi":"10.6084/m9.figshare.c.3756974_d1.v1","date_updated":"2025-07-10T11:49:39Z","day":"26","department":[{"_id":"SyCr"}],"abstract":[{"text":"Lists of all differentially expressed genes in the different priming-challenge treatments (compared to the fully naïve control; xlsx file). Relevant columns include the following: sample_1 and sample_2 – treatment groups being compared; Normalised FPKM sample_1 and sample_2 – FPKM of samples being compared; log2(fold_change) – log2(FPKM sample 2/FPKM sample 1), i.e. negative means sample 1 upregulated compared with sample 2, positive means sample 2 upregulated compared with sample 1; cuffdiff test_statistic – test statistic of differential expression test; p_value – p-value of differential expression test; q_value (FDR correction) – adjusted P-value of differential expression test. (XLSX 598 kb)","lang":"eng"}],"related_material":{"record":[{"relation":"used_in_publication","id":"1006","status":"public"}]},"author":[{"first_name":"Jenny","full_name":"Greenwood, Jenny","last_name":"Greenwood"},{"first_name":"Barbara","orcid":"0000-0002-8214-4758","id":"2CDC32B8-F248-11E8-B48F-1D18A9856A87","full_name":"Milutinovic, Barbara","last_name":"Milutinovic"},{"first_name":"Robert","full_name":"Peuß, Robert","last_name":"Peuß"},{"last_name":"Behrens","first_name":"Sarah","full_name":"Behrens, Sarah"},{"last_name":"Essar","first_name":"Daniela","full_name":"Essar, Daniela"},{"full_name":"Rosenstiel, Philip","first_name":"Philip","last_name":"Rosenstiel"},{"last_name":"Schulenburg","full_name":"Schulenburg, Hinrich","first_name":"Hinrich"},{"full_name":"Kurtz, Joachim","first_name":"Joachim","last_name":"Kurtz"}],"citation":{"chicago":"Greenwood, Jenny, Barbara Milutinovic, Robert Peuß, Sarah Behrens, Daniela Essar, Philip Rosenstiel, Hinrich Schulenburg, and Joachim Kurtz. “Additional File 1: Table S1. of Oral Immune Priming with Bacillus Thuringiensis Induces a Shift in the Gene Expression of Tribolium Castaneum Larvae.” Springer Nature, 2017. <a href=\"https://doi.org/10.6084/m9.figshare.c.3756974_d1.v1\">https://doi.org/10.6084/m9.figshare.c.3756974_d1.v1</a>.","ieee":"J. Greenwood <i>et al.</i>, “Additional file 1: Table S1. of Oral immune priming with Bacillus thuringiensis induces a shift in the gene expression of Tribolium castaneum larvae.” Springer Nature, 2017.","short":"J. Greenwood, B. Milutinovic, R. Peuß, S. Behrens, D. Essar, P. Rosenstiel, H. Schulenburg, J. Kurtz, (2017).","ama":"Greenwood J, Milutinovic B, Peuß R, et al. Additional file 1: Table S1. of Oral immune priming with Bacillus thuringiensis induces a shift in the gene expression of Tribolium castaneum larvae. 2017. doi:<a href=\"https://doi.org/10.6084/m9.figshare.c.3756974_d1.v1\">10.6084/m9.figshare.c.3756974_d1.v1</a>","ista":"Greenwood J, Milutinovic B, Peuß R, Behrens S, Essar D, Rosenstiel P, Schulenburg H, Kurtz J. 2017. Additional file 1: Table S1. of Oral immune priming with Bacillus thuringiensis induces a shift in the gene expression of Tribolium castaneum larvae, Springer Nature, <a href=\"https://doi.org/10.6084/m9.figshare.c.3756974_d1.v1\">10.6084/m9.figshare.c.3756974_d1.v1</a>.","apa":"Greenwood, J., Milutinovic, B., Peuß, R., Behrens, S., Essar, D., Rosenstiel, P., … Kurtz, J. (2017). Additional file 1: Table S1. of Oral immune priming with Bacillus thuringiensis induces a shift in the gene expression of Tribolium castaneum larvae. Springer Nature. <a href=\"https://doi.org/10.6084/m9.figshare.c.3756974_d1.v1\">https://doi.org/10.6084/m9.figshare.c.3756974_d1.v1</a>","mla":"Greenwood, Jenny, et al. <i>Additional File 1: Table S1. of Oral Immune Priming with Bacillus Thuringiensis Induces a Shift in the Gene Expression of Tribolium Castaneum Larvae</i>. Springer Nature, 2017, doi:<a href=\"https://doi.org/10.6084/m9.figshare.c.3756974_d1.v1\">10.6084/m9.figshare.c.3756974_d1.v1</a>."},"main_file_link":[{"url":"https://doi.org/10.6084/m9.figshare.c.3756974_d1.v1","open_access":"1"}]},{"date_updated":"2025-07-10T11:49:39Z","day":"26","department":[{"_id":"SyCr"}],"fulldoi":"https://doi.org/10.6084/m9.figshare.c.3756974_d5.v1","doi":"10.6084/m9.figshare.c.3756974_d5.v1","publisher":"Springer Nature","article_processing_charge":"No","user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","date_created":"2021-08-10T08:07:12Z","oa":1,"oa_version":"Published Version","title":"Additional file 5: Table S3. of Oral immune priming with Bacillus thuringiensis induces a shift in the gene expression of Tribolium castaneum larvae","type":"research_data_reference","month":"04","_id":"9860","date_published":"2017-04-26T00:00:00Z","status":"public","year":"2017","citation":{"chicago":"Greenwood, Jenny, Barbara Milutinovic, Robert Peuß, Sarah Behrens, Daniela Essar, Philip Rosenstiel, Hinrich Schulenburg, and Joachim Kurtz. “Additional File 5: Table S3. of Oral Immune Priming with Bacillus Thuringiensis Induces a Shift in the Gene Expression of Tribolium Castaneum Larvae.” Springer Nature, 2017. <a href=\"https://doi.org/10.6084/m9.figshare.c.3756974_d5.v1\">https://doi.org/10.6084/m9.figshare.c.3756974_d5.v1</a>.","short":"J. Greenwood, B. Milutinovic, R. Peuß, S. Behrens, D. Essar, P. Rosenstiel, H. Schulenburg, J. Kurtz, (2017).","ieee":"J. Greenwood <i>et al.</i>, “Additional file 5: Table S3. of Oral immune priming with Bacillus thuringiensis induces a shift in the gene expression of Tribolium castaneum larvae.” Springer Nature, 2017.","mla":"Greenwood, Jenny, et al. <i>Additional File 5: Table S3. of Oral Immune Priming with Bacillus Thuringiensis Induces a Shift in the Gene Expression of Tribolium Castaneum Larvae</i>. Springer Nature, 2017, doi:<a href=\"https://doi.org/10.6084/m9.figshare.c.3756974_d5.v1\">10.6084/m9.figshare.c.3756974_d5.v1</a>.","apa":"Greenwood, J., Milutinovic, B., Peuß, R., Behrens, S., Essar, D., Rosenstiel, P., … Kurtz, J. (2017). Additional file 5: Table S3. of Oral immune priming with Bacillus thuringiensis induces a shift in the gene expression of Tribolium castaneum larvae. Springer Nature. <a href=\"https://doi.org/10.6084/m9.figshare.c.3756974_d5.v1\">https://doi.org/10.6084/m9.figshare.c.3756974_d5.v1</a>","ama":"Greenwood J, Milutinovic B, Peuß R, et al. Additional file 5: Table S3. of Oral immune priming with Bacillus thuringiensis induces a shift in the gene expression of Tribolium castaneum larvae. 2017. doi:<a href=\"https://doi.org/10.6084/m9.figshare.c.3756974_d5.v1\">10.6084/m9.figshare.c.3756974_d5.v1</a>","ista":"Greenwood J, Milutinovic B, Peuß R, Behrens S, Essar D, Rosenstiel P, Schulenburg H, Kurtz J. 2017. Additional file 5: Table S3. of Oral immune priming with Bacillus thuringiensis induces a shift in the gene expression of Tribolium castaneum larvae, Springer Nature, <a href=\"https://doi.org/10.6084/m9.figshare.c.3756974_d5.v1\">10.6084/m9.figshare.c.3756974_d5.v1</a>."},"main_file_link":[{"url":"https://doi.org/10.6084/m9.figshare.c.3756974_d5.v1","open_access":"1"}],"author":[{"full_name":"Greenwood, Jenny","first_name":"Jenny","last_name":"Greenwood"},{"orcid":"0000-0002-8214-4758","first_name":"Barbara","full_name":"Milutinovic, Barbara","id":"2CDC32B8-F248-11E8-B48F-1D18A9856A87","last_name":"Milutinovic"},{"last_name":"Peuß","first_name":"Robert","full_name":"Peuß, Robert"},{"full_name":"Behrens, Sarah","first_name":"Sarah","last_name":"Behrens"},{"last_name":"Essar","full_name":"Essar, Daniela","first_name":"Daniela"},{"full_name":"Rosenstiel, Philip","first_name":"Philip","last_name":"Rosenstiel"},{"full_name":"Schulenburg, Hinrich","first_name":"Hinrich","last_name":"Schulenburg"},{"last_name":"Kurtz","full_name":"Kurtz, Joachim","first_name":"Joachim"}],"related_material":{"record":[{"status":"public","relation":"used_in_publication","id":"1006"}]}},{"fulldoi":"https://doi.org/10.5061/dryad.02f6r","doi":"10.5061/dryad.02f6r","publisher":"Dryad","date_updated":"2025-07-10T11:49:45Z","department":[{"_id":"BeVi"}],"day":"14","type":"research_data_reference","_id":"9861","status":"public","date_published":"2017-02-14T00:00:00Z","month":"02","year":"2017","article_processing_charge":"No","date_created":"2021-08-10T08:12:52Z","oa":1,"oa_version":"Published Version","user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","title":"Data from: X-linkage is not a general inhibitor of tissue-specific gene expression in Drosophila melanogaster","citation":{"chicago":"Argyridou, Eliza, Ann K Huylmans, Annabella Königer, and John Parsch. “Data from: X-Linkage Is Not a General Inhibitor of Tissue-Specific Gene Expression in Drosophila Melanogaster.” Dryad, 2017. <a href=\"https://doi.org/10.5061/dryad.02f6r\">https://doi.org/10.5061/dryad.02f6r</a>.","ista":"Argyridou E, Huylmans AK, Königer A, Parsch J. 2017. Data from: X-linkage is not a general inhibitor of tissue-specific gene expression in Drosophila melanogaster, Dryad, <a href=\"https://doi.org/10.5061/dryad.02f6r\">10.5061/dryad.02f6r</a>.","ama":"Argyridou E, Huylmans AK, Königer A, Parsch J. Data from: X-linkage is not a general inhibitor of tissue-specific gene expression in Drosophila melanogaster. 2017. doi:<a href=\"https://doi.org/10.5061/dryad.02f6r\">10.5061/dryad.02f6r</a>","apa":"Argyridou, E., Huylmans, A. K., Königer, A., &#38; Parsch, J. (2017). Data from: X-linkage is not a general inhibitor of tissue-specific gene expression in Drosophila melanogaster. Dryad. <a href=\"https://doi.org/10.5061/dryad.02f6r\">https://doi.org/10.5061/dryad.02f6r</a>","mla":"Argyridou, Eliza, et al. <i>Data from: X-Linkage Is Not a General Inhibitor of Tissue-Specific Gene Expression in Drosophila Melanogaster</i>. Dryad, 2017, doi:<a href=\"https://doi.org/10.5061/dryad.02f6r\">10.5061/dryad.02f6r</a>.","ieee":"E. Argyridou, A. K. Huylmans, A. Königer, and J. Parsch, “Data from: X-linkage is not a general inhibitor of tissue-specific gene expression in Drosophila melanogaster.” Dryad, 2017.","short":"E. Argyridou, A.K. Huylmans, A. Königer, J. Parsch, (2017)."},"main_file_link":[{"url":"https://doi.org/10.5061/dryad.02f6r","open_access":"1"}],"abstract":[{"text":"As a consequence of its difference in copy number between males and females, the X chromosome is subject to unique evolutionary forces and gene regulatory mechanisms. Previous studies of Drosophila melanogaster have shown that the expression of X-linked, testis-specific reporter genes is suppressed in the male germline. However, it is not known whether this phenomenon is restricted to testis-expressed genes or if it is a more general property of genes with tissue-specific expression, which are also underrepresented on the X chromosome. To test this, we compared the expression of three tissue-specific reporter genes (ovary, accessory gland and Malpighian tubule) inserted at various autosomal and X-chromosomal locations. In contrast to testis-specific reporter genes, we found no reduction of X-linked expression in any of the other tissues. In accessory gland and Malpighian tubule, we detected higher expression of the X-linked reporter genes, which suggests that they are at least partially dosage compensated. We found no difference in the tissue-specificity of X-linked and autosomal reporter genes. These findings indicate that, in general, the X chromosome is not a detrimental environment for tissue-specific gene expression and that the suppression of X-linked expression is limited to the male germline.","lang":"eng"}],"related_material":{"record":[{"id":"1019","relation":"used_in_publication","status":"public"}]},"author":[{"last_name":"Argyridou","first_name":"Eliza","full_name":"Argyridou, Eliza"},{"last_name":"Huylmans","full_name":"Huylmans, Ann K","id":"4C0A3874-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-8871-4961","first_name":"Ann K"},{"last_name":"Königer","full_name":"Königer, Annabella","first_name":"Annabella"},{"last_name":"Parsch","first_name":"John","full_name":"Parsch, John"}]},{"author":[{"last_name":"Nanda","first_name":"Gaurav","full_name":"Nanda, Gaurav"},{"id":"2A67C376-F248-11E8-B48F-1D18A9856A87","full_name":"Aguilera Servin, Juan L","first_name":"Juan L","orcid":"0000-0002-2862-8372","last_name":"Aguilera Servin"},{"full_name":"Rakyta, Péter","first_name":"Péter","last_name":"Rakyta"},{"last_name":"Kormányos","first_name":"Andor","full_name":"Kormányos, Andor"},{"full_name":"Kleiner, Reinhold","first_name":"Reinhold","last_name":"Kleiner"},{"full_name":"Koelle, Dieter","first_name":"Dieter","last_name":"Koelle"},{"full_name":"Watanabe, Kazuo","first_name":"Kazuo","last_name":"Watanabe"},{"first_name":"Takashi","full_name":"Taniguchi, Takashi","last_name":"Taniguchi"},{"last_name":"Vandersypen","full_name":"Vandersypen, Lieven","first_name":"Lieven"},{"last_name":"Goswami","full_name":"Goswami, Srijit","first_name":"Srijit"}],"abstract":[{"text":"The current-phase relation (CPR) of a Josephson junction (JJ) determines how the supercurrent evolves with the superconducting phase difference across the junction. Knowledge of the CPR is essential in order to understand the response of a JJ to various external parameters. Despite the rising interest in ultraclean encapsulated graphene JJs, the CPR of such junctions remains unknown. Here, we use a fully gate-tunable graphene superconducting quantum intereference device (SQUID) to determine the CPR of ballistic graphene JJs. Each of the two JJs in the SQUID is made with graphene encapsulated in hexagonal boron nitride. By independently controlling the critical current of the JJs, we can operate the SQUID either in a symmetric or asymmetric configuration. The highly asymmetric SQUID allows us to phase-bias one of the JJs and thereby directly obtain its CPR. The CPR is found to be skewed, deviating significantly from a sinusoidal form. The skewness can be tuned with the gate voltage and oscillates in antiphase with Fabry-Pérot resistance oscillations of the ballistic graphene cavity. We compare our experiments with tight-binding calculations that include realistic graphene-superconductor interfaces and find a good qualitative agreement.","lang":"eng"}],"isi":1,"oa":1,"article_processing_charge":"No","title":"Current-phase relation of ballistic graphene Josephson junctions","scopus_import":"1","publication":"Nano Letters","year":"2017","status":"public","_id":"988","month":"05","publication_identifier":{"issn":["1530-6984"]},"license":"https://creativecommons.org/licenses/by-nc-nd/4.0/","day":"05","ddc":["621"],"fulldoi":"https://doi.org/10.1021/acs.nanolett.7b00097","publisher":"American Chemical Society","file_date_updated":"2020-07-14T12:48:18Z","doi":"10.1021/acs.nanolett.7b00097","volume":17,"publist_id":"6412","issue":"6","external_id":{"isi":["000403631600011"]},"citation":{"chicago":"Nanda, Gaurav, Juan L Aguilera Servin, Péter Rakyta, Andor Kormányos, Reinhold Kleiner, Dieter Koelle, Kazuo Watanabe, Takashi Taniguchi, Lieven Vandersypen, and Srijit Goswami. “Current-Phase Relation of Ballistic Graphene Josephson Junctions.” <i>Nano Letters</i>. American Chemical Society, 2017. <a href=\"https://doi.org/10.1021/acs.nanolett.7b00097\">https://doi.org/10.1021/acs.nanolett.7b00097</a>.","apa":"Nanda, G., Aguilera Servin, J. L., Rakyta, P., Kormányos, A., Kleiner, R., Koelle, D., … Goswami, S. (2017). Current-phase relation of ballistic graphene Josephson junctions. <i>Nano Letters</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acs.nanolett.7b00097\">https://doi.org/10.1021/acs.nanolett.7b00097</a>","mla":"Nanda, Gaurav, et al. “Current-Phase Relation of Ballistic Graphene Josephson Junctions.” <i>Nano Letters</i>, vol. 17, no. 6, American Chemical Society, 2017, pp. 3396–401, doi:<a href=\"https://doi.org/10.1021/acs.nanolett.7b00097\">10.1021/acs.nanolett.7b00097</a>.","ama":"Nanda G, Aguilera Servin JL, Rakyta P, et al. Current-phase relation of ballistic graphene Josephson junctions. <i>Nano Letters</i>. 2017;17(6):3396-3401. doi:<a href=\"https://doi.org/10.1021/acs.nanolett.7b00097\">10.1021/acs.nanolett.7b00097</a>","ista":"Nanda G, Aguilera Servin JL, Rakyta P, Kormányos A, Kleiner R, Koelle D, Watanabe K, Taniguchi T, Vandersypen L, Goswami S. 2017. Current-phase relation of ballistic graphene Josephson junctions. Nano Letters. 17(6), 3396–3401.","short":"G. Nanda, J.L. Aguilera Servin, P. Rakyta, A. Kormányos, R. Kleiner, D. Koelle, K. Watanabe, T. Taniguchi, L. Vandersypen, S. Goswami, Nano Letters 17 (2017) 3396–3401.","ieee":"G. Nanda <i>et al.</i>, “Current-phase relation of ballistic graphene Josephson junctions,” <i>Nano Letters</i>, vol. 17, no. 6. American Chemical Society, pp. 3396–3401, 2017."},"page":"3396 - 3401","oa_version":"Published Version","date_created":"2018-12-11T11:49:33Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","language":[{"iso":"eng"}],"pubrep_id":"826","intvolume":"        17","quality_controlled":"1","has_accepted_license":"1","type":"journal_article","date_published":"2017-05-05T00:00:00Z","date_updated":"2025-07-10T12:02:04Z","department":[{"_id":"NanoFab"}],"publication_status":"published","file":[{"date_created":"2018-12-12T10:13:50Z","creator":"system","file_size":508638,"access_level":"open_access","date_updated":"2020-07-14T12:48:18Z","relation":"main_file","checksum":"22021daa90cf13b01becd776838acb7b","file_id":"5037","file_name":"IST-2017-826-v1+1_2017_Aguilera-Servin_Current.pdf","content_type":"application/pdf"}],"tmp":{"short":"CC BY-NC-ND (4.0)","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","image":"/images/cc_by_nc_nd.png"}},{"file":[{"access_level":"open_access","date_created":"2019-04-17T07:37:04Z","creator":"dernst","file_size":625260,"file_name":"2017_Evolution_Sachdeva_supplement.pdf","content_type":"application/pdf","date_updated":"2020-07-14T12:48:18Z","checksum":"6d4c38cb1347fd43620d1736c6df5c79","relation":"main_file","file_id":"6329"},{"access_level":"open_access","file_size":520110,"creator":"dernst","date_created":"2019-04-17T07:37:04Z","content_type":"application/pdf","file_name":"2017_Evolution_Sachdeva_article.pdf","file_id":"6330","checksum":"f1d90dd8831b44baf49b4dd176f263af","relation":"main_file","date_updated":"2020-07-14T12:48:18Z"}],"date_updated":"2025-07-10T12:02:04Z","department":[{"_id":"NiBa"}],"publication_status":"published","has_accepted_license":"1","type":"journal_article","date_published":"2017-06-01T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2018-12-11T11:49:34Z","oa_version":"Submitted Version","language":[{"iso":"eng"}],"pubrep_id":"977","quality_controlled":"1","intvolume":"        71","external_id":{"pmid":["28419447"],"isi":["000403014800005"]},"citation":{"ieee":"H. Sachdeva and N. H. Barton, “Divergence and evolution of assortative mating in a polygenic trait model of speciation with gene flow,” <i>Evolution; International Journal of Organic Evolution</i>, vol. 71, no. 6. Wiley-Blackwell, pp. 1478–1493, 2017.","short":"H. Sachdeva, N.H. Barton, Evolution; International Journal of Organic Evolution 71 (2017) 1478–1493.","ama":"Sachdeva H, Barton NH. Divergence and evolution of assortative mating in a polygenic trait model of speciation with gene flow. <i>Evolution; International Journal of Organic Evolution</i>. 2017;71(6):1478-1493. doi:<a href=\"https://doi.org/10.1111/evo.13252\">10.1111/evo.13252</a>","ista":"Sachdeva H, Barton NH. 2017. Divergence and evolution of assortative mating in a polygenic trait model of speciation with gene flow. Evolution; International Journal of Organic Evolution. 71(6), 1478–1493.","mla":"Sachdeva, Himani, and Nicholas H. Barton. “Divergence and Evolution of Assortative Mating in a Polygenic Trait Model of Speciation with Gene Flow.” <i>Evolution; International Journal of Organic Evolution</i>, vol. 71, no. 6, Wiley-Blackwell, 2017, pp. 1478–93, doi:<a href=\"https://doi.org/10.1111/evo.13252\">10.1111/evo.13252</a>.","apa":"Sachdeva, H., &#38; Barton, N. H. (2017). Divergence and evolution of assortative mating in a polygenic trait model of speciation with gene flow. <i>Evolution; International Journal of Organic Evolution</i>. Wiley-Blackwell. <a href=\"https://doi.org/10.1111/evo.13252\">https://doi.org/10.1111/evo.13252</a>","chicago":"Sachdeva, Himani, and Nicholas H Barton. “Divergence and Evolution of Assortative Mating in a Polygenic Trait Model of Speciation with Gene Flow.” <i>Evolution; International Journal of Organic Evolution</i>. Wiley-Blackwell, 2017. <a href=\"https://doi.org/10.1111/evo.13252\">https://doi.org/10.1111/evo.13252</a>."},"page":"1478 - 1493 ","issue":"6","ec_funded":1,"publist_id":"6409","volume":71,"project":[{"call_identifier":"FP7","name":"International IST Postdoc Fellowship Programme","grant_number":"291734","_id":"25681D80-B435-11E9-9278-68D0E5697425"},{"_id":"25B07788-B435-11E9-9278-68D0E5697425","grant_number":"250152","name":"Limits to selection in biology and in evolutionary computation","call_identifier":"FP7"}],"ddc":["576"],"fulldoi":"https://doi.org/10.1111/evo.13252","publisher":"Wiley-Blackwell","doi":"10.1111/evo.13252","file_date_updated":"2020-07-14T12:48:18Z","publication_identifier":{"issn":["0014-3820"]},"day":"01","publication":"Evolution; International Journal of Organic Evolution","year":"2017","status":"public","_id":"990","month":"06","oa":1,"article_processing_charge":"No","title":"Divergence and evolution of assortative mating in a polygenic trait model of speciation with gene flow","scopus_import":"1","corr_author":"1","isi":1,"abstract":[{"lang":"eng","text":"Assortative mating is an important driver of speciation in populations with gene flow and is predicted to evolve under certain conditions in few-locus models. However, the evolution of assortment is less understood for mating based on quantitative traits, which are often characterized by high genetic variability and extensive linkage disequilibrium between trait loci. We explore this scenario for a two-deme model with migration, by considering a single polygenic trait subject to divergent viability selection across demes, as well as assortative mating and sexual selection within demes, and investigate how trait divergence is shaped by various evolutionary forces. Our analysis reveals the existence of sharp thresholds of assortment strength, at which divergence increases dramatically. We also study the evolution of assortment via invasion of modifiers of mate discrimination and show that the ES assortment strength has an intermediate value under a range of migration-selection parameters, even in diverged populations, due to subtle effects which depend sensitively on the extent of phenotypic variation within these populations. The evolutionary dynamics of the polygenic trait is studied using the hypergeometric and infinitesimal models. We further investigate the sensitivity of our results to the assumptions of the hypergeometric model, using individual-based simulations."}],"pmid":1,"author":[{"last_name":"Sachdeva","first_name":"Himani","full_name":"Sachdeva, Himani","id":"42377A0A-F248-11E8-B48F-1D18A9856A87"},{"id":"4880FE40-F248-11E8-B48F-1D18A9856A87","full_name":"Barton, Nicholas H","orcid":"0000-0002-8548-5240","first_name":"Nicholas H","last_name":"Barton"}]},{"author":[{"first_name":"Michal","id":"3CB3BC06-F248-11E8-B48F-1D18A9856A87","full_name":"Rolinek, Michal","last_name":"Rolinek"}],"degree_awarded":"PhD","abstract":[{"lang":"eng","text":"An instance of the Constraint Satisfaction Problem (CSP) is given by a finite set of\r\nvariables, a finite domain of labels, and a set of constraints, each constraint acting on\r\na subset of the variables. The goal is to find an assignment of labels to its variables\r\nthat satisfies all constraints (or decide whether one exists). If we allow more general\r\n“soft” constraints, which come with (possibly infinite) costs of particular assignments,\r\nwe obtain instances from a richer class called Valued Constraint Satisfaction Problem\r\n(VCSP). There the goal is to find an assignment with minimum total cost.\r\nIn this thesis, we focus (assuming that P\r\n6\r\n=\r\nNP) on classifying computational com-\r\nplexity of CSPs and VCSPs under certain restricting conditions. Two results are the core\r\ncontent of the work. In one of them, we consider VCSPs parametrized by a constraint\r\nlanguage, that is the set of “soft” constraints allowed to form the instances, and finish\r\nthe complexity classification modulo (missing pieces of) complexity classification for\r\nanalogously parametrized CSP. The other result is a generalization of Edmonds’ perfect\r\nmatching algorithm. This generalization contributes to complexity classfications in two\r\nways. First, it gives a new (largest known) polynomial-time solvable class of Boolean\r\nCSPs in which every variable may appear in at most two constraints and second, it\r\nsettles full classification of Boolean CSPs with planar drawing (again parametrized by a\r\nconstraint language)."}],"corr_author":"1","title":"Complexity of constraint satisfaction","oa":1,"article_processing_charge":"No","year":"2017","_id":"992","status":"public","month":"05","alternative_title":["ISTA Thesis"],"day":"01","publication_identifier":{"issn":["2663-337X"]},"publisher":"Institute of Science and Technology Austria","file_date_updated":"2020-07-14T12:48:18Z","doi":"10.15479/AT:ISTA:th_815","OA_place":"publisher","fulldoi":"https://doi.org/10.15479/AT:ISTA:th_815","ddc":["004"],"project":[{"call_identifier":"FP7","grant_number":"616160","name":"Discrete Optimization in Computer Vision: Theory and Practice","_id":"25FBA906-B435-11E9-9278-68D0E5697425"}],"acknowledgement":"FP7/2007-2013/ERC grant agreement no 616160","supervisor":[{"last_name":"Kolmogorov","first_name":"Vladimir","id":"3D50B0BA-F248-11E8-B48F-1D18A9856A87","full_name":"Kolmogorov, Vladimir"}],"publist_id":"6407","ec_funded":1,"citation":{"chicago":"Rolinek, Michal. “Complexity of Constraint Satisfaction.” Institute of Science and Technology Austria, 2017. <a href=\"https://doi.org/10.15479/AT:ISTA:th_815\">https://doi.org/10.15479/AT:ISTA:th_815</a>.","mla":"Rolinek, Michal. <i>Complexity of Constraint Satisfaction</i>. Institute of Science and Technology Austria, 2017, doi:<a href=\"https://doi.org/10.15479/AT:ISTA:th_815\">10.15479/AT:ISTA:th_815</a>.","apa":"Rolinek, M. (2017). <i>Complexity of constraint satisfaction</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT:ISTA:th_815\">https://doi.org/10.15479/AT:ISTA:th_815</a>","ama":"Rolinek M. Complexity of constraint satisfaction. 2017. doi:<a href=\"https://doi.org/10.15479/AT:ISTA:th_815\">10.15479/AT:ISTA:th_815</a>","ista":"Rolinek M. 2017. Complexity of constraint satisfaction. Institute of Science and Technology Austria.","short":"M. Rolinek, Complexity of Constraint Satisfaction, Institute of Science and Technology Austria, 2017.","ieee":"M. Rolinek, “Complexity of constraint satisfaction,” Institute of Science and Technology Austria, 2017."},"page":"97","date_created":"2018-12-11T11:49:35Z","oa_version":"Published Version","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","language":[{"iso":"eng"}],"pubrep_id":"815","date_published":"2017-05-01T00:00:00Z","has_accepted_license":"1","type":"dissertation","publication_status":"published","department":[{"_id":"VlKo"}],"date_updated":"2026-04-08T14:17:06Z","file":[{"content_type":"application/pdf","file_name":"IST-2017-815-v1+3_final_blank_signature_maybe_pdfa.pdf","file_id":"4654","checksum":"81761fb939acb7585c36629f765b4373","relation":"main_file","date_updated":"2020-07-14T12:48:18Z","access_level":"open_access","file_size":786145,"creator":"system","date_created":"2018-12-12T10:07:55Z"},{"content_type":"application/zip","file_name":"2017_Thesis_Rolinek_source.zip","file_id":"6208","checksum":"2b2d7e1d6c1c79a9795a7aa0f860baf3","relation":"source_file","date_updated":"2020-07-14T12:48:18Z","access_level":"closed","file_size":5936337,"creator":"dernst","date_created":"2019-04-05T08:43:24Z"}]},{"article_processing_charge":"Yes (in subscription journal)","oa":1,"scopus_import":"1","title":"Subsampling scaling","publication":"Nature Communications","_id":"993","month":"05","status":"public","year":"2017","publication_identifier":{"issn":["2041-1723"]},"day":"04","fulldoi":"https://doi.org/10.1038/ncomms15140","ddc":["005","571"],"file_date_updated":"2020-07-14T12:48:19Z","doi":"10.1038/ncomms15140","publisher":"Nature Publishing Group","author":[{"last_name":"Levina (Martius)","full_name":"Levina (Martius), Anna","id":"35AF8020-F248-11E8-B48F-1D18A9856A87","first_name":"Anna"},{"last_name":"Priesemann","full_name":"Priesemann, Viola","first_name":"Viola"}],"abstract":[{"lang":"eng","text":"In real-world applications, observations are often constrained to a small fraction of a system. Such spatial subsampling can be caused by the inaccessibility or the sheer size of the system, and cannot be overcome by longer sampling. Spatial subsampling can strongly bias inferences about a system’s aggregated properties. To overcome the bias, we derive analytically a subsampling scaling framework that is applicable to different observables, including distributions of neuronal avalanches, of number of people infected during an epidemic outbreak, and of node degrees. We demonstrate how to infer the correct distributions of the underlying full system, how to apply it to distinguish critical from subcritical systems, and how to disentangle subsampling and finite size effects. Lastly, we apply subsampling scaling to neuronal avalanche models and to recordings from developing neural networks. We show that only mature, but not young networks follow power-law scaling, indicating self-organization to criticality during development."}],"isi":1,"article_number":"15140","pubrep_id":"819","language":[{"iso":"eng"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Published Version","date_created":"2018-12-11T11:49:35Z","intvolume":"         8","quality_controlled":"1","type":"journal_article","has_accepted_license":"1","date_published":"2017-05-04T00:00:00Z","date_updated":"2025-07-10T12:02:06Z","publication_status":"published","department":[{"_id":"GaTk"},{"_id":"JoCs"}],"tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"creator":"system","file_size":746224,"date_created":"2018-12-12T10:15:05Z","access_level":"open_access","relation":"main_file","checksum":"9880212f8c4c53404c7c6fbf9023c53a","file_id":"5122","date_updated":"2020-07-14T12:48:19Z","file_name":"IST-2017-819-v1+1_2017_Levina_SubsamplingScaling.pdf","content_type":"application/pdf"}],"volume":8,"project":[{"call_identifier":"FP7","name":"International IST Postdoc Fellowship Programme","grant_number":"291734","_id":"25681D80-B435-11E9-9278-68D0E5697425"}],"publist_id":"6406","ec_funded":1,"citation":{"chicago":"Levina (Martius), Anna, and Viola Priesemann. “Subsampling Scaling.” <i>Nature Communications</i>. Nature Publishing Group, 2017. <a href=\"https://doi.org/10.1038/ncomms15140\">https://doi.org/10.1038/ncomms15140</a>.","ama":"Levina (Martius) A, Priesemann V. Subsampling scaling. <i>Nature Communications</i>. 2017;8. doi:<a href=\"https://doi.org/10.1038/ncomms15140\">10.1038/ncomms15140</a>","ista":"Levina (Martius) A, Priesemann V. 2017. Subsampling scaling. Nature Communications. 8, 15140.","apa":"Levina (Martius), A., &#38; Priesemann, V. (2017). Subsampling scaling. <i>Nature Communications</i>. Nature Publishing Group. <a href=\"https://doi.org/10.1038/ncomms15140\">https://doi.org/10.1038/ncomms15140</a>","mla":"Levina (Martius), Anna, and Viola Priesemann. “Subsampling Scaling.” <i>Nature Communications</i>, vol. 8, 15140, Nature Publishing Group, 2017, doi:<a href=\"https://doi.org/10.1038/ncomms15140\">10.1038/ncomms15140</a>.","ieee":"A. Levina (Martius) and V. Priesemann, “Subsampling scaling,” <i>Nature Communications</i>, vol. 8. Nature Publishing Group, 2017.","short":"A. Levina (Martius), V. Priesemann, Nature Communications 8 (2017)."},"external_id":{"isi":["000400560700001"]}},{"publication":"Physical Review Materials","year":"2017","month":"08","_id":"994","status":"public","oa":1,"article_processing_charge":"No","title":"Fingerprints of angulon instabilities in the spectra of matrix-isolated molecules","scopus_import":"1","fulldoi":"https://doi.org/10.1103/PhysRevMaterials.1.035602","publisher":"American Physical Society","doi":"10.1103/PhysRevMaterials.1.035602","day":"08","abstract":[{"lang":"eng","text":"The formation of vortices is usually considered to be the main mechanism of angular momentum disposal in superfluids. Recently, it was predicted that a superfluid can acquire angular momentum via an alternative, microscopic route -- namely, through interaction with rotating impurities, forming so-called `angulon quasiparticles' [Phys. Rev. Lett. 114, 203001 (2015)]. The angulon instabilities correspond to transfer of a small number of angular momentum quanta from the impurity to the superfluid, as opposed to vortex instabilities, where angular momentum is quantized in units of ℏ  per atom. Furthermore, since conventional impurities (such as molecules) represent three-dimensional (3D) rotors, the angular momentum transferred is intrinsically 3D as well, as opposed to a merely planar rotation which is inherent to vortices. Herein we show that the angulon theory can explain the anomalous broadening of the spectroscopic lines observed for CH 3   and NH 3   molecules in superfluid helium nanodroplets, thereby providing a fingerprint of the emerging angulon instabilities in experiment."}],"author":[{"last_name":"Cherepanov","first_name":"Igor","full_name":"Cherepanov, Igor","id":"339C7E5A-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Lemeshko","full_name":"Lemeshko, Mikhail","id":"37CB05FA-F248-11E8-B48F-1D18A9856A87","first_name":"Mikhail","orcid":"0000-0002-6990-7802"}],"corr_author":"1","isi":1,"type":"journal_article","date_published":"2017-08-08T00:00:00Z","date_created":"2018-12-11T11:49:35Z","oa_version":"Submitted Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","language":[{"iso":"eng"}],"arxiv":1,"quality_controlled":"1","intvolume":"         1","date_updated":"2025-06-04T10:15:04Z","publication_status":"published","department":[{"_id":"MiLe"}],"publist_id":"6405","volume":1,"project":[{"_id":"26031614-B435-11E9-9278-68D0E5697425","grant_number":"P29902","name":"Quantum rotations in the presence of a many-body environment","call_identifier":"FWF"},{"call_identifier":"H2020","_id":"2564DBCA-B435-11E9-9278-68D0E5697425","grant_number":"665385","name":"International IST Doctoral Program"}],"external_id":{"arxiv":["1705.09220"],"isi":["000416564000004"]},"citation":{"chicago":"Cherepanov, Igor, and Mikhail Lemeshko. “Fingerprints of Angulon Instabilities in the Spectra of Matrix-Isolated Molecules.” <i>Physical Review Materials</i>. American Physical Society, 2017. <a href=\"https://doi.org/10.1103/PhysRevMaterials.1.035602\">https://doi.org/10.1103/PhysRevMaterials.1.035602</a>.","short":"I. Cherepanov, M. Lemeshko, Physical Review Materials 1 (2017).","ieee":"I. Cherepanov and M. Lemeshko, “Fingerprints of angulon instabilities in the spectra of matrix-isolated molecules,” <i>Physical Review Materials</i>, vol. 1, no. 3. American Physical Society, 2017.","apa":"Cherepanov, I., &#38; Lemeshko, M. (2017). Fingerprints of angulon instabilities in the spectra of matrix-isolated molecules. <i>Physical Review Materials</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevMaterials.1.035602\">https://doi.org/10.1103/PhysRevMaterials.1.035602</a>","mla":"Cherepanov, Igor, and Mikhail Lemeshko. “Fingerprints of Angulon Instabilities in the Spectra of Matrix-Isolated Molecules.” <i>Physical Review Materials</i>, vol. 1, no. 3, American Physical Society, 2017, doi:<a href=\"https://doi.org/10.1103/PhysRevMaterials.1.035602\">10.1103/PhysRevMaterials.1.035602</a>.","ama":"Cherepanov I, Lemeshko M. Fingerprints of angulon instabilities in the spectra of matrix-isolated molecules. <i>Physical Review Materials</i>. 2017;1(3). doi:<a href=\"https://doi.org/10.1103/PhysRevMaterials.1.035602\">10.1103/PhysRevMaterials.1.035602</a>","ista":"Cherepanov I, Lemeshko M. 2017. Fingerprints of angulon instabilities in the spectra of matrix-isolated molecules. Physical Review Materials. 1(3)."},"main_file_link":[{"url":"https://arxiv.org/abs/1705.09220","open_access":"1"}],"issue":"3","ec_funded":1},{"status":"public","_id":"996","month":"06","year":"2017","publication":"The Journal of Chemical Physics","scopus_import":"1","title":"Strongly aligned molecules inside helium droplets in the near-adiabatic regime","article_processing_charge":"No","oa":1,"doi":"10.1063/1.4983703","publisher":"AIP Publishing","fulldoi":"https://doi.org/10.1063/1.4983703","day":"01","publication_identifier":{"issn":["0021-9606"]},"abstract":[{"lang":"eng","text":"Iodine (I 2  ) molecules embedded in He nanodroplets are aligned by a 160 ps long laser pulse. The highest degree of alignment, occurring at the peak of the pulse and quantified by ⟨cos 2 θ 2D ⟩ , is measured as a function of the laser intensity. The results are well described by ⟨cos 2 θ 2D ⟩  calculated for a gas of isolated molecules each with an effective rotational constant of 0.6 times the gas-phase value, and at a temperature of 0.4 K. Theoretical analysis using the angulon quasiparticle to describe rotating molecules in superfluid helium rationalizes why the alignment mechanism is similar to that of isolated molecules with an effective rotational constant. A major advantage of molecules in He droplets is that their 0.4 K temperature leads to stronger alignment than what can generally be achieved for gas phase molecules -- here demonstrated by a direct comparison of the droplet results to measurements on a ∼  1 K supersonic beam of isolated molecules. This point is further illustrated for more complex system by measurements on 1,4-diiodobenzene and 1,4-dibromobenzene. For all three molecular species studied the highest values of ⟨cos 2 θ 2D ⟩  achieved in He droplets exceed 0.96. "}],"author":[{"last_name":"Shepperson","first_name":"Benjamin","full_name":"Shepperson, Benjamin"},{"last_name":"Chatterley","full_name":"Chatterley, Adam","first_name":"Adam"},{"last_name":"Søndergaard","full_name":"Søndergaard, Anders","first_name":"Anders"},{"last_name":"Christiansen","first_name":"Lars","full_name":"Christiansen, Lars"},{"last_name":"Lemeshko","id":"37CB05FA-F248-11E8-B48F-1D18A9856A87","full_name":"Lemeshko, Mikhail","first_name":"Mikhail","orcid":"0000-0002-6990-7802"},{"full_name":"Stapelfeldt, Henrik","first_name":"Henrik","last_name":"Stapelfeldt"}],"isi":1,"article_number":"013946","date_published":"2017-06-01T00:00:00Z","type":"journal_article","arxiv":1,"intvolume":"       147","quality_controlled":"1","language":[{"iso":"eng"}],"oa_version":"Submitted Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2018-12-11T11:49:36Z","publication_status":"published","department":[{"_id":"MiLe"}],"date_updated":"2025-06-04T08:17:46Z","publist_id":"6403","volume":147,"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1704.03684"}],"citation":{"short":"B. Shepperson, A. Chatterley, A. Søndergaard, L. Christiansen, M. Lemeshko, H. Stapelfeldt, The Journal of Chemical Physics 147 (2017).","ieee":"B. Shepperson, A. Chatterley, A. Søndergaard, L. Christiansen, M. Lemeshko, and H. Stapelfeldt, “Strongly aligned molecules inside helium droplets in the near-adiabatic regime,” <i>The Journal of Chemical Physics</i>, vol. 147, no. 1. AIP Publishing, 2017.","apa":"Shepperson, B., Chatterley, A., Søndergaard, A., Christiansen, L., Lemeshko, M., &#38; Stapelfeldt, H. (2017). Strongly aligned molecules inside helium droplets in the near-adiabatic regime. <i>The Journal of Chemical Physics</i>. AIP Publishing. <a href=\"https://doi.org/10.1063/1.4983703\">https://doi.org/10.1063/1.4983703</a>","mla":"Shepperson, Benjamin, et al. “Strongly Aligned Molecules inside Helium Droplets in the Near-Adiabatic Regime.” <i>The Journal of Chemical Physics</i>, vol. 147, no. 1, 013946, AIP Publishing, 2017, doi:<a href=\"https://doi.org/10.1063/1.4983703\">10.1063/1.4983703</a>.","ista":"Shepperson B, Chatterley A, Søndergaard A, Christiansen L, Lemeshko M, Stapelfeldt H. 2017. Strongly aligned molecules inside helium droplets in the near-adiabatic regime. The Journal of Chemical Physics. 147(1), 013946.","ama":"Shepperson B, Chatterley A, Søndergaard A, Christiansen L, Lemeshko M, Stapelfeldt H. Strongly aligned molecules inside helium droplets in the near-adiabatic regime. <i>The Journal of Chemical Physics</i>. 2017;147(1). doi:<a href=\"https://doi.org/10.1063/1.4983703\">10.1063/1.4983703</a>","chicago":"Shepperson, Benjamin, Adam Chatterley, Anders Søndergaard, Lars Christiansen, Mikhail Lemeshko, and Henrik Stapelfeldt. “Strongly Aligned Molecules inside Helium Droplets in the Near-Adiabatic Regime.” <i>The Journal of Chemical Physics</i>. AIP Publishing, 2017. <a href=\"https://doi.org/10.1063/1.4983703\">https://doi.org/10.1063/1.4983703</a>."},"external_id":{"arxiv":["1704.03684"],"isi":["000405089400047"]},"issue":"1"},{"author":[{"orcid":"0000-0001-5973-0874","first_name":"Enderalp","id":"38CB71F6-F248-11E8-B48F-1D18A9856A87","full_name":"Yakaboylu, Enderalp","last_name":"Yakaboylu"},{"id":"4DA65CD0-F248-11E8-B48F-1D18A9856A87","full_name":"Deuchert, Andreas","orcid":"0000-0003-3146-6746","first_name":"Andreas","last_name":"Deuchert"},{"last_name":"Lemeshko","full_name":"Lemeshko, Mikhail","id":"37CB05FA-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-6990-7802","first_name":"Mikhail"}],"abstract":[{"lang":"eng","text":"Recently it was shown that molecules rotating in superfluid helium can be described in terms of the angulon quasiparticles (Phys. Rev. Lett. 118, 095301 (2017)). Here we demonstrate that in the experimentally realized regime the angulon can be seen as a point charge on a 2-sphere interacting with a gauge field of a non-abelian magnetic monopole. Unlike in several other settings, the gauge fields of the angulon problem emerge in the real coordinate space, as opposed to the momentum space or some effective parameter space. Furthermore, we find a topological transition associated with making the monopole abelian, which takes place in the vicinity of the previously reported angulon instabilities. These results pave the way for studying topological phenomena in experiments on molecules trapped in superfluid helium nanodroplets, as well as on other realizations of orbital impurity problems."}],"article_number":"235301","corr_author":"1","isi":1,"title":"Emergence of non-abelian magnetic monopoles in a quantum impurity problem","scopus_import":"1","oa":1,"article_processing_charge":"No","year":"2017","month":"12","_id":"997","status":"public","publication":"Physical Review Letters","day":"06","publication_identifier":{"issn":["0031-9007"]},"publisher":"American Physical Society","doi":"10.1103/PhysRevLett.119.235301","fulldoi":"https://doi.org/10.1103/PhysRevLett.119.235301","project":[{"call_identifier":"FP7","_id":"25681D80-B435-11E9-9278-68D0E5697425","grant_number":"291734","name":"International IST Postdoc Fellowship Programme"},{"call_identifier":"H2020","grant_number":"694227","name":"Analysis of quantum many-body systems","_id":"25C6DC12-B435-11E9-9278-68D0E5697425"},{"call_identifier":"FWF","_id":"26031614-B435-11E9-9278-68D0E5697425","name":"Quantum rotations in the presence of a many-body environment","grant_number":"P29902"}],"volume":119,"publist_id":"6401","ec_funded":1,"issue":"23","main_file_link":[{"url":"https://arxiv.org/abs/1705.05162","open_access":"1"}],"external_id":{"arxiv":["1705.05162"],"isi":["000417132100007"]},"citation":{"ama":"Yakaboylu E, Deuchert A, Lemeshko M. Emergence of non-abelian magnetic monopoles in a quantum impurity problem. <i>Physical Review Letters</i>. 2017;119(23). doi:<a href=\"https://doi.org/10.1103/PhysRevLett.119.235301\">10.1103/PhysRevLett.119.235301</a>","ista":"Yakaboylu E, Deuchert A, Lemeshko M. 2017. Emergence of non-abelian magnetic monopoles in a quantum impurity problem. Physical Review Letters. 119(23), 235301.","apa":"Yakaboylu, E., Deuchert, A., &#38; Lemeshko, M. (2017). Emergence of non-abelian magnetic monopoles in a quantum impurity problem. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevLett.119.235301\">https://doi.org/10.1103/PhysRevLett.119.235301</a>","mla":"Yakaboylu, Enderalp, et al. “Emergence of Non-Abelian Magnetic Monopoles in a Quantum Impurity Problem.” <i>Physical Review Letters</i>, vol. 119, no. 23, 235301, American Physical Society, 2017, doi:<a href=\"https://doi.org/10.1103/PhysRevLett.119.235301\">10.1103/PhysRevLett.119.235301</a>.","ieee":"E. Yakaboylu, A. Deuchert, and M. Lemeshko, “Emergence of non-abelian magnetic monopoles in a quantum impurity problem,” <i>Physical Review Letters</i>, vol. 119, no. 23. American Physical Society, 2017.","short":"E. Yakaboylu, A. Deuchert, M. Lemeshko, Physical Review Letters 119 (2017).","chicago":"Yakaboylu, Enderalp, Andreas Deuchert, and Mikhail Lemeshko. “Emergence of Non-Abelian Magnetic Monopoles in a Quantum Impurity Problem.” <i>Physical Review Letters</i>. American Physical Society, 2017. <a href=\"https://doi.org/10.1103/PhysRevLett.119.235301\">https://doi.org/10.1103/PhysRevLett.119.235301</a>."},"arxiv":1,"intvolume":"       119","quality_controlled":"1","oa_version":"Preprint","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2018-12-11T11:49:36Z","language":[{"iso":"eng"}],"date_published":"2017-12-06T00:00:00Z","type":"journal_article","department":[{"_id":"MiLe"},{"_id":"RoSe"}],"publication_status":"published","date_updated":"2025-04-14T07:26:54Z","article_type":"original"},{"ec_funded":1,"citation":{"short":"S.A. Rebuffi, A. Kolesnikov, G. Sperl, C. Lampert, in:, IEEE, 2017, pp. 5533–5542.","ieee":"S. A. Rebuffi, A. Kolesnikov, G. Sperl, and C. Lampert, “iCaRL: Incremental classifier and representation learning,” presented at the CVPR: Computer Vision and Pattern Recognition, Honolulu, HA, United States, 2017, vol. 2017, pp. 5533–5542.","mla":"Rebuffi, Sylvestre Alvise, et al. <i>ICaRL: Incremental Classifier and Representation Learning</i>. Vol. 2017, IEEE, 2017, pp. 5533–42, doi:<a href=\"https://doi.org/10.1109/CVPR.2017.587\">10.1109/CVPR.2017.587</a>.","apa":"Rebuffi, S. A., Kolesnikov, A., Sperl, G., &#38; Lampert, C. (2017). iCaRL: Incremental classifier and representation learning (Vol. 2017, pp. 5533–5542). Presented at the CVPR: Computer Vision and Pattern Recognition, Honolulu, HA, United States: IEEE. <a href=\"https://doi.org/10.1109/CVPR.2017.587\">https://doi.org/10.1109/CVPR.2017.587</a>","ama":"Rebuffi SA, Kolesnikov A, Sperl G, Lampert C. iCaRL: Incremental classifier and representation learning. In: Vol 2017. IEEE; 2017:5533-5542. doi:<a href=\"https://doi.org/10.1109/CVPR.2017.587\">10.1109/CVPR.2017.587</a>","ista":"Rebuffi SA, Kolesnikov A, Sperl G, Lampert C. 2017. iCaRL: Incremental classifier and representation learning. CVPR: Computer Vision and Pattern Recognition vol. 2017, 5533–5542.","chicago":"Rebuffi, Sylvestre Alvise, Alexander Kolesnikov, Georg Sperl, and Christoph Lampert. “ICaRL: Incremental Classifier and Representation Learning,” 2017:5533–42. IEEE, 2017. <a href=\"https://doi.org/10.1109/CVPR.2017.587\">https://doi.org/10.1109/CVPR.2017.587</a>."},"page":"5533 - 5542","external_id":{"arxiv":["1611.07725"],"isi":["000418371405066"]},"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1611.07725"}],"volume":2017,"project":[{"_id":"2532554C-B435-11E9-9278-68D0E5697425","grant_number":"308036","name":"Lifelong Learning of Visual Scene Understanding","call_identifier":"FP7"}],"publist_id":"6400","date_updated":"2025-06-04T08:18:32Z","publication_status":"published","department":[{"_id":"ChLa"},{"_id":"ChWo"}],"language":[{"iso":"eng"}],"date_created":"2018-12-11T11:49:37Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Submitted Version","quality_controlled":"1","intvolume":"      2017","arxiv":1,"type":"conference","date_published":"2017-04-14T00:00:00Z","isi":1,"author":[{"full_name":"Rebuffi, Sylvestre Alvise","first_name":"Sylvestre Alvise","last_name":"Rebuffi"},{"first_name":"Alexander","full_name":"Kolesnikov, Alexander","id":"2D157DB6-F248-11E8-B48F-1D18A9856A87","last_name":"Kolesnikov"},{"last_name":"Sperl","first_name":"Georg","id":"4DD40360-F248-11E8-B48F-1D18A9856A87","full_name":"Sperl, Georg"},{"first_name":"Christoph","orcid":"0000-0001-8622-7887","id":"40C20FD2-F248-11E8-B48F-1D18A9856A87","full_name":"Lampert, Christoph","last_name":"Lampert"}],"abstract":[{"lang":"eng","text":"A major open problem on the road to artificial intelligence is the development of incrementally learning systems that learn about more and more concepts over time from a stream of data. In this work, we introduce a new training strategy, iCaRL, that allows learning in such a class-incremental way: only the training data for a small number of classes has to be present at the same time and new classes can be added progressively. iCaRL learns strong classifiers and a data representation simultaneously. This distinguishes it from earlier works that were fundamentally limited to fixed data representations and therefore incompatible with deep learning architectures. We show by experiments on CIFAR-100 and ImageNet ILSVRC 2012 data that iCaRL can learn many classes incrementally over a long period of time where other strategies quickly fail. "}],"publication_identifier":{"isbn":["978-153860457-1"]},"day":"14","fulldoi":"https://doi.org/10.1109/CVPR.2017.587","doi":"10.1109/CVPR.2017.587","publisher":"IEEE","article_processing_charge":"No","oa":1,"scopus_import":"1","title":"iCaRL: Incremental classifier and representation learning","conference":{"end_date":"2017-07-26","name":"CVPR: Computer Vision and Pattern Recognition","location":"Honolulu, HA, United States","start_date":"2017-07-21"},"month":"04","_id":"998","status":"public","year":"2017"},{"corr_author":"1","isi":1,"abstract":[{"text":"In multi-task learning, a learner is given a collection of prediction tasks and needs to solve all of them. In contrast to previous work, which required that annotated training data must be available for all tasks, we consider a new setting, in which for some tasks, potentially most of them, only unlabeled training data is provided. Consequently, to solve all tasks, information must be transferred between tasks with labels and tasks without labels. Focusing on an instance-based transfer method we analyze two variants of this setting: when the set of labeled tasks is fixed, and when it can be actively selected by the learner. We state and prove a generalization bound that covers both scenarios and derive from it an algorithm for making the choice of labeled tasks (in the active case) and for transferring information between the tasks in a principled way. We also illustrate the effectiveness of the algorithm on synthetic and real data. ","lang":"eng"}],"author":[{"last_name":"Pentina","first_name":"Anastasia","id":"42E87FC6-F248-11E8-B48F-1D18A9856A87","full_name":"Pentina, Anastasia"},{"full_name":"Lampert, Christoph","id":"40C20FD2-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-8622-7887","first_name":"Christoph","last_name":"Lampert"}],"publisher":"ML Research Press","publication_identifier":{"isbn":["9781510855144"]},"day":"08","alternative_title":["PMLR"],"conference":{"location":"Sydney, Australia","end_date":"2017-08-11","name":"ICML: International Conference on Machine Learning","start_date":"2017-08-06"},"_id":"999","status":"public","month":"06","year":"2017","article_processing_charge":"No","oa":1,"scopus_import":"1","title":"Multi-task learning with labeled and unlabeled tasks","citation":{"chicago":"Pentina, Anastasia, and Christoph Lampert. “Multi-Task Learning with Labeled and Unlabeled Tasks,” 70:2807–16. ML Research Press, 2017.","ieee":"A. Pentina and C. Lampert, “Multi-task learning with labeled and unlabeled tasks,” presented at the ICML: International Conference on Machine Learning, Sydney, Australia, 2017, vol. 70, pp. 2807–2816.","short":"A. Pentina, C. Lampert, in:, ML Research Press, 2017, pp. 2807–2816.","ama":"Pentina A, Lampert C. Multi-task learning with labeled and unlabeled tasks. In: Vol 70. ML Research Press; 2017:2807-2816.","ista":"Pentina A, Lampert C. 2017. Multi-task learning with labeled and unlabeled tasks. ICML: International Conference on Machine Learning, PMLR, vol. 70, 2807–2816.","mla":"Pentina, Anastasia, and Christoph Lampert. <i>Multi-Task Learning with Labeled and Unlabeled Tasks</i>. Vol. 70, ML Research Press, 2017, pp. 2807–16.","apa":"Pentina, A., &#38; Lampert, C. (2017). Multi-task learning with labeled and unlabeled tasks (Vol. 70, pp. 2807–2816). Presented at the ICML: International Conference on Machine Learning, Sydney, Australia: ML Research Press."},"page":"2807 - 2816","external_id":{"isi":["000683309502093"],"arxiv":["1602.06518"]},"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1602.06518"}],"ec_funded":1,"publist_id":"6399","volume":70,"project":[{"_id":"2532554C-B435-11E9-9278-68D0E5697425","name":"Lifelong Learning of Visual Scene Understanding","grant_number":"308036","call_identifier":"FP7"}],"date_updated":"2025-06-04T08:19:03Z","department":[{"_id":"ChLa"}],"publication_status":"published","type":"conference","date_published":"2017-06-08T00:00:00Z","language":[{"iso":"eng"}],"date_created":"2018-12-11T11:49:37Z","oa_version":"Submitted Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","intvolume":"        70","quality_controlled":"1","arxiv":1},{"publication_status":"published","department":[{"_id":"MiLe"}],"date_updated":"2025-09-18T10:29:07Z","tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"file_name":"2017_Physics_Camus.pdf","content_type":"application/pdf","relation":"main_file","checksum":"6e70b525a84f6d5fb175c48e9f5cb59a","file_id":"5871","date_updated":"2020-07-14T12:46:00Z","access_level":"open_access","creator":"dernst","file_size":949321,"date_created":"2019-01-22T08:34:10Z"}],"arxiv":1,"quality_controlled":"1","intvolume":"       999","language":[{"iso":"eng"}],"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","date_created":"2018-12-11T11:45:46Z","oa_version":"Published Version","date_published":"2017-07-14T00:00:00Z","type":"conference","has_accepted_license":"1","issue":"1","citation":{"chicago":"Camus, Nicolas, Enderalp Yakaboylu, Lutz Fechner, Michael Klaiber, Martin Laux, Yonghao Mi, Karen Hatsagortsyan, Thomas Pfeifer, Cristoph Keitel, and Robert Moshammer. “Experimental Evidence for Wigner’s Tunneling Time,” Vol. 999. American Physical Society, 2017. <a href=\"https://doi.org/10.1088/1742-6596/999/1/012004\">https://doi.org/10.1088/1742-6596/999/1/012004</a>.","short":"N. Camus, E. Yakaboylu, L. Fechner, M. Klaiber, M. Laux, Y. Mi, K. Hatsagortsyan, T. Pfeifer, C. Keitel, R. Moshammer, in:, American Physical Society, 2017.","ieee":"N. Camus <i>et al.</i>, “Experimental evidence for Wigner’s tunneling time,” presented at the Annual International Laser Physics Workshop LPHYS, Kazan, Russian Federation, 2017, vol. 999, no. 1.","apa":"Camus, N., Yakaboylu, E., Fechner, L., Klaiber, M., Laux, M., Mi, Y., … Moshammer, R. (2017). Experimental evidence for Wigner’s tunneling time (Vol. 999). Presented at the Annual International Laser Physics Workshop LPHYS, Kazan, Russian Federation: American Physical Society. <a href=\"https://doi.org/10.1088/1742-6596/999/1/012004\">https://doi.org/10.1088/1742-6596/999/1/012004</a>","mla":"Camus, Nicolas, et al. <i>Experimental Evidence for Wigner’s Tunneling Time</i>. Vol. 999, no. 1, 012004, American Physical Society, 2017, doi:<a href=\"https://doi.org/10.1088/1742-6596/999/1/012004\">10.1088/1742-6596/999/1/012004</a>.","ista":"Camus N, Yakaboylu E, Fechner L, Klaiber M, Laux M, Mi Y, Hatsagortsyan K, Pfeifer T, Keitel C, Moshammer R. 2017. Experimental evidence for Wigner’s tunneling time. Annual International Laser Physics Workshop LPHYS, Journal of Physics: Conference Series, vol. 999, 012004.","ama":"Camus N, Yakaboylu E, Fechner L, et al. Experimental evidence for Wigner’s tunneling time. In: Vol 999. American Physical Society; 2017. doi:<a href=\"https://doi.org/10.1088/1742-6596/999/1/012004\">10.1088/1742-6596/999/1/012004</a>"},"external_id":{"arxiv":["1611.03701"],"isi":["000432427200004"]},"volume":999,"publist_id":"7552","day":"14","publication_identifier":{"issn":["1742-6588"]},"doi":"10.1088/1742-6596/999/1/012004","file_date_updated":"2020-07-14T12:46:00Z","publisher":"American Physical Society","fulldoi":"https://doi.org/10.1088/1742-6596/999/1/012004","ddc":["530"],"scopus_import":"1","title":"Experimental evidence for Wigner's tunneling time","article_processing_charge":"No","oa":1,"month":"07","_id":"313","status":"public","year":"2017","alternative_title":["Journal of Physics: Conference Series"],"conference":{"start_date":"2017-08-17","location":"Kazan, Russian Federation","end_date":"2017-08-21","name":"Annual International Laser Physics Workshop LPHYS"},"isi":1,"article_number":"012004","author":[{"last_name":"Camus","full_name":"Camus, Nicolas","first_name":"Nicolas"},{"id":"38CB71F6-F248-11E8-B48F-1D18A9856A87","full_name":"Yakaboylu, Enderalp","orcid":"0000-0001-5973-0874","first_name":"Enderalp","last_name":"Yakaboylu"},{"last_name":"Fechner","full_name":"Fechner, Lutz","first_name":"Lutz"},{"first_name":"Michael","full_name":"Klaiber, Michael","last_name":"Klaiber"},{"last_name":"Laux","full_name":"Laux, Martin","first_name":"Martin"},{"last_name":"Mi","first_name":"Yonghao","full_name":"Mi, Yonghao"},{"last_name":"Hatsagortsyan","full_name":"Hatsagortsyan, Karen","first_name":"Karen"},{"last_name":"Pfeifer","first_name":"Thomas","full_name":"Pfeifer, Thomas"},{"full_name":"Keitel, Cristoph","first_name":"Cristoph","last_name":"Keitel"},{"first_name":"Robert","full_name":"Moshammer, Robert","last_name":"Moshammer"}],"related_material":{"record":[{"status":"public","id":"6013","relation":"later_version"}]},"abstract":[{"lang":"eng","text":"Tunneling of a particle through a potential barrier remains one of the most remarkable quantum phenomena. Owing to advances in laser technology, electric fields comparable to those electrons experience in atoms are readily generated and open opportunities to dynamically investigate the process of electron tunneling through the potential barrier formed by the superposition of both laser and atomic fields. Attosecond-time and angstrom-space resolution of the strong laser-field technique allow to address fundamental questions related to tunneling, which are still open and debated: Which time is spent under the barrier and what momentum is picked up by the particle in the meantime? In this combined experimental and theoretical study we demonstrate that for strong-field ionization the leading quantum mechanical Wigner treatment for the time resolved description of tunneling is valid. We achieve a high sensitivity on the tunneling barrier and unambiguously isolate its effects by performing a differential study of two systems with almost identical tunneling geometry. Moreover, working with a low frequency laser, we essentially limit the non-adiabaticity of the process as a major source of uncertainty. The agreement between experiment and theory implies two substantial corrections with respect to the widely employed quasiclassical treatment: In addition to a non-vanishing longitudinal momentum along the laser field-direction we provide clear evidence for a non-zero tunneling time delay. This addresses also the fundamental question how the transition occurs from the tunnel barrier to free space classical evolution of the ejected electron."}]},{"volume":8,"publist_id":"7438","citation":{"chicago":"Xu, Yishuai, Janet Chiu, Lin Miao, Haowei He, Zhanybek Alpichshev, Aharon Kapitulnik, Rudro Biswas, and Lewis Wray. “Disorder Enabled Band Structure Engineering of a Topological Insulator Surface.” <i>Nature Communications</i>. Springer Nature, 2017. <a href=\"https://doi.org/10.1038/ncomms14081\">https://doi.org/10.1038/ncomms14081</a>.","short":"Y. Xu, J. Chiu, L. Miao, H. He, Z. Alpichshev, A. Kapitulnik, R. Biswas, L. Wray, Nature Communications 8 (2017).","ieee":"Y. Xu <i>et al.</i>, “Disorder enabled band structure engineering of a topological insulator surface,” <i>Nature Communications</i>, vol. 8. Springer Nature, 2017.","apa":"Xu, Y., Chiu, J., Miao, L., He, H., Alpichshev, Z., Kapitulnik, A., … Wray, L. (2017). Disorder enabled band structure engineering of a topological insulator surface. <i>Nature Communications</i>. Springer Nature. <a href=\"https://doi.org/10.1038/ncomms14081\">https://doi.org/10.1038/ncomms14081</a>","mla":"Xu, Yishuai, et al. “Disorder Enabled Band Structure Engineering of a Topological Insulator Surface.” <i>Nature Communications</i>, vol. 8, 14081, Springer Nature, 2017, doi:<a href=\"https://doi.org/10.1038/ncomms14081\">10.1038/ncomms14081</a>.","ama":"Xu Y, Chiu J, Miao L, et al. Disorder enabled band structure engineering of a topological insulator surface. <i>Nature Communications</i>. 2017;8. doi:<a href=\"https://doi.org/10.1038/ncomms14081\">10.1038/ncomms14081</a>","ista":"Xu Y, Chiu J, Miao L, He H, Alpichshev Z, Kapitulnik A, Biswas R, Wray L. 2017. Disorder enabled band structure engineering of a topological insulator surface. Nature Communications. 8, 14081."},"main_file_link":[{"open_access":"1","url":"https://doi.org/10.1038/ncomms14081"}],"language":[{"iso":"eng"}],"date_created":"2018-12-11T11:46:12Z","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","oa_version":"Published Version","intvolume":"         8","quality_controlled":"1","type":"journal_article","date_published":"2017-02-03T00:00:00Z","date_updated":"2025-07-08T15:09:23Z","extern":"1","publication_status":"published","author":[{"full_name":"Xu, Yishuai","first_name":"Yishuai","last_name":"Xu"},{"last_name":"Chiu","full_name":"Chiu, Janet","first_name":"Janet"},{"first_name":"Lin","full_name":"Miao, Lin","last_name":"Miao"},{"full_name":"He, Haowei","first_name":"Haowei","last_name":"He"},{"full_name":"Alpichshev, Zhanybek","id":"45E67A2A-F248-11E8-B48F-1D18A9856A87","first_name":"Zhanybek","orcid":"0000-0002-7183-5203","last_name":"Alpichshev"},{"last_name":"Kapitulnik","first_name":"Aharon","full_name":"Kapitulnik, Aharon"},{"last_name":"Biswas","first_name":"Rudro","full_name":"Biswas, Rudro"},{"first_name":"Lewis","full_name":"Wray, Lewis","last_name":"Wray"}],"abstract":[{"text":"Three-dimensional topological insulators are bulk insulators with Z 2 topological electronic order that gives rise to conducting light-like surface states. These surface electrons are exceptionally resistant to localization by non-magnetic disorder, and have been adopted as the basis for a wide range of proposals to achieve new quasiparticle species and device functionality. Recent studies have yielded a surprise by showing that in spite of resisting localization, topological insulator surface electrons can be reshaped by defects into distinctive resonance states. Here we use numerical simulations and scanning tunnelling microscopy data to show that these resonance states have significance well beyond the localized regime usually associated with impurity bands. At native densities in the model Bi2X3 (X=Bi, Te) compounds, defect resonance states are predicted to generate a new quantum basis for an emergent electron gas that supports diffusive electrical transport. ","lang":"eng"}],"OA_type":"gold","article_number":"14081","article_processing_charge":"No","oa":1,"scopus_import":"1","title":"Disorder enabled band structure engineering of a topological insulator surface","DOAJ_listed":"1","publication":"Nature Communications","_id":"391","status":"public","month":"02","year":"2017","publication_identifier":{"eissn":["2041-1723"]},"day":"03","fulldoi":"https://doi.org/10.1038/ncomms14081","doi":"10.1038/ncomms14081","OA_place":"publisher","publisher":"Springer Nature"},{"author":[{"full_name":"Vishik, Inna","first_name":"Inna","last_name":"Vishik"},{"last_name":"Mahmood","first_name":"Fahad","full_name":"Mahmood, Fahad"},{"last_name":"Alpichshev","id":"45E67A2A-F248-11E8-B48F-1D18A9856A87","full_name":"Alpichshev, Zhanybek","orcid":"0000-0002-7183-5203","first_name":"Zhanybek"},{"first_name":"Nuh","full_name":"Gedik, Nuh","last_name":"Gedik"},{"full_name":"Higgins, Joshu","first_name":"Joshu","last_name":"Higgins"},{"last_name":"Greene","first_name":"Richard","full_name":"Greene, Richard"}],"abstract":[{"lang":"eng","text":"We used femtosecond optical pump-probe spectroscopy to study the photoinduced change in reflectivity of thin films of the electron-doped cuprate La2-xCexCuO4 (LCCO) with dopings of x=0.08 (underdoped) and x=0.11 (optimally doped). Above Tc, we observe fluence-dependent relaxation rates that begin at a temperature similar to the one where transport measurements first show signatures of antiferromagnetic correlations. Upon suppressing superconductivity with a magnetic field, it is found that the fluence and temperature dependence of relaxation rates are consistent with bimolecular recombination of electrons and holes across a gap (2ΔAF) originating from antiferromagnetic correlations which comprise the pseudogap in electron-doped cuprates. This can be used to learn about coupling between electrons and high-energy (ω&gt;2ΔAF) excitations in these compounds and set limits on the time scales on which antiferromagnetic correlations are static."}],"OA_type":"green","article_number":"115125","oa":1,"article_processing_charge":"No","title":"Ultrafast dynamics in the presence of antiferromagnetic correlations in electron doped cuprate La2 xCexCuO4±δ","scopus_import":"1","publication":"Physical Review B","year":"2017","_id":"392","status":"public","month":"03","publication_identifier":{"eissn":["2469-9969"],"issnl":["2469-9950"]},"day":"13","fulldoi":"https://doi.org/10.1103/PhysRevB.95.115125","publisher":"American Physical Society","OA_place":"repository","doi":"10.1103/PhysRevB.95.115125","acknowledgement":"Optical pump-probe work was supported by the Gordon and Betty Moore Foundation's EPiQS initiative through Grant No. GBMF4540. Materials growth and characterization was supported by AFOSR FA95501410332 and NSF DMR1410665.","volume":95,"publist_id":"7437","issue":"11","external_id":{"arxiv":["1601.06694"]},"citation":{"ieee":"I. Vishik, F. Mahmood, Z. Alpichshev, N. Gedik, J. Higgins, and R. Greene, “Ultrafast dynamics in the presence of antiferromagnetic correlations in electron doped cuprate La2 xCexCuO4±δ,” <i>Physical Review B</i>, vol. 95, no. 11. American Physical Society, 2017.","short":"I. Vishik, F. Mahmood, Z. Alpichshev, N. Gedik, J. Higgins, R. Greene, Physical Review B 95 (2017).","ista":"Vishik I, Mahmood F, Alpichshev Z, Gedik N, Higgins J, Greene R. 2017. Ultrafast dynamics in the presence of antiferromagnetic correlations in electron doped cuprate La2 xCexCuO4±δ. Physical Review B. 95(11), 115125.","ama":"Vishik I, Mahmood F, Alpichshev Z, Gedik N, Higgins J, Greene R. Ultrafast dynamics in the presence of antiferromagnetic correlations in electron doped cuprate La2 xCexCuO4±δ. <i>Physical Review B</i>. 2017;95(11). doi:<a href=\"https://doi.org/10.1103/PhysRevB.95.115125\">10.1103/PhysRevB.95.115125</a>","mla":"Vishik, Inna, et al. “Ultrafast Dynamics in the Presence of Antiferromagnetic Correlations in Electron Doped Cuprate La2 XCexCuO4±δ.” <i>Physical Review B</i>, vol. 95, no. 11, 115125, American Physical Society, 2017, doi:<a href=\"https://doi.org/10.1103/PhysRevB.95.115125\">10.1103/PhysRevB.95.115125</a>.","apa":"Vishik, I., Mahmood, F., Alpichshev, Z., Gedik, N., Higgins, J., &#38; Greene, R. (2017). Ultrafast dynamics in the presence of antiferromagnetic correlations in electron doped cuprate La2 xCexCuO4±δ. <i>Physical Review B</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevB.95.115125\">https://doi.org/10.1103/PhysRevB.95.115125</a>","chicago":"Vishik, Inna, Fahad Mahmood, Zhanybek Alpichshev, Nuh Gedik, Joshu Higgins, and Richard Greene. “Ultrafast Dynamics in the Presence of Antiferromagnetic Correlations in Electron Doped Cuprate La2 XCexCuO4±δ.” <i>Physical Review B</i>. American Physical Society, 2017. <a href=\"https://doi.org/10.1103/PhysRevB.95.115125\">https://doi.org/10.1103/PhysRevB.95.115125</a>."},"main_file_link":[{"open_access":"1","url":"http://dspace.mit.edu/handle/1721.1/109835"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2018-12-11T11:46:13Z","oa_version":"Preprint","language":[{"iso":"eng"}],"intvolume":"        95","quality_controlled":"1","arxiv":1,"type":"journal_article","date_published":"2017-03-13T00:00:00Z","date_updated":"2026-05-06T06:56:15Z","extern":"1","publication_status":"published","article_type":"original"}]