---
_id: '14425'
abstract:
- lang: eng
  text: 'Water adsorption and dissociation processes on pristine low-index TiO2 interfaces
    are important but poorly understood outside the well-studied anatase (101) and
    rutile (110). To understand these, we construct three sets of machine learning
    potentials that are simultaneously applicable to various TiO2 surfaces, based
    on three density-functional-theory approximations. Here we show the water dissociation
    free energies on seven pristine TiO2 surfaces, and predict that anatase (100),
    anatase (110), rutile (001), and rutile (011) favor water dissociation, anatase
    (101) and rutile (100) have mostly molecular adsorption, while the simulations
    of rutile (110) sensitively depend on the slab thickness and molecular adsorption
    is preferred with thick slabs. Moreover, using an automated algorithm, we reveal
    that these surfaces follow different types of atomistic mechanisms for proton
    transfer and water dissociation: one-step, two-step, or both. These mechanisms
    can be rationalized based on the arrangements of water molecules on the different
    surfaces. Our finding thus demonstrates that the different pristine TiO2 surfaces
    react with water in distinct ways, and cannot be represented using just the low-energy
    anatase (101) and rutile (110) surfaces.'
acknowledgement: F.S., J.H., and B.C. thank the Swiss National Supercomputing Centre
  (CSCS) for the generous allocation of CPU hours via production project s1108 at
  the Piz Daint supercomputer. B.C. acknowledges resources provided by the Cambridge
  Tier-2 system operated by the University of Cambridge Research Computing Service
  funded by EPSRC Tier-2 capital grant EP/P020259/1. J.C. acknowledges the Beijing
  Natural Science Foundation for support under grant No. JQ22001. F.S., and J.H. thank
  the Swiss Platform for Advanced Scientific Computing (PASC) via the 2021-2024 “Ab
  Initio Molecular Dynamics at the Exa-Scale” project. This project has received funding
  from the European Union’s Horizon 2020 research and innovation programme under the
  Marie Skłodowska-Curie grant agreement No 101034413.
article_number: '6131'
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Zezhu
  full_name: Zeng, Zezhu
  id: 54a2c730-803f-11ed-ab7e-95b29d2680e7
  last_name: Zeng
- first_name: Felix
  full_name: Wodaczek, Felix
  id: 8b4b6a9f-32b0-11ee-9fa8-bbe85e26258e
  last_name: Wodaczek
  orcid: 0009-0000-1457-795X
- first_name: Keyang
  full_name: Liu, Keyang
  last_name: Liu
- first_name: Frederick
  full_name: Stein, Frederick
  last_name: Stein
- first_name: Jürg
  full_name: Hutter, Jürg
  last_name: Hutter
- first_name: Ji
  full_name: Chen, Ji
  last_name: Chen
- first_name: Bingqing
  full_name: Cheng, Bingqing
  id: cbe3cda4-d82c-11eb-8dc7-8ff94289fcc9
  last_name: Cheng
  orcid: 0000-0002-3584-9632
citation:
  ama: Zeng Z, Wodaczek F, Liu K, et al. Mechanistic insight on water dissociation
    on pristine low-index TiO2 surfaces from machine learning molecular dynamics simulations.
    <i>Nature Communications</i>. 2023;14. doi:<a href="https://doi.org/10.1038/s41467-023-41865-8">10.1038/s41467-023-41865-8</a>
  apa: Zeng, Z., Wodaczek, F., Liu, K., Stein, F., Hutter, J., Chen, J., &#38; Cheng,
    B. (2023). Mechanistic insight on water dissociation on pristine low-index TiO2
    surfaces from machine learning molecular dynamics simulations. <i>Nature Communications</i>.
    Springer Nature. <a href="https://doi.org/10.1038/s41467-023-41865-8">https://doi.org/10.1038/s41467-023-41865-8</a>
  chicago: Zeng, Zezhu, Felix Wodaczek, Keyang Liu, Frederick Stein, Jürg Hutter,
    Ji Chen, and Bingqing Cheng. “Mechanistic Insight on Water Dissociation on Pristine
    Low-Index TiO2 Surfaces from Machine Learning Molecular Dynamics Simulations.”
    <i>Nature Communications</i>. Springer Nature, 2023. <a href="https://doi.org/10.1038/s41467-023-41865-8">https://doi.org/10.1038/s41467-023-41865-8</a>.
  ieee: Z. Zeng <i>et al.</i>, “Mechanistic insight on water dissociation on pristine
    low-index TiO2 surfaces from machine learning molecular dynamics simulations,”
    <i>Nature Communications</i>, vol. 14. Springer Nature, 2023.
  ista: Zeng Z, Wodaczek F, Liu K, Stein F, Hutter J, Chen J, Cheng B. 2023. Mechanistic
    insight on water dissociation on pristine low-index TiO2 surfaces from machine
    learning molecular dynamics simulations. Nature Communications. 14, 6131.
  mla: Zeng, Zezhu, et al. “Mechanistic Insight on Water Dissociation on Pristine
    Low-Index TiO2 Surfaces from Machine Learning Molecular Dynamics Simulations.”
    <i>Nature Communications</i>, vol. 14, 6131, Springer Nature, 2023, doi:<a href="https://doi.org/10.1038/s41467-023-41865-8">10.1038/s41467-023-41865-8</a>.
  short: Z. Zeng, F. Wodaczek, K. Liu, F. Stein, J. Hutter, J. Chen, B. Cheng, Nature
    Communications 14 (2023).
corr_author: '1'
date_created: 2023-10-15T22:01:10Z
date_published: 2023-10-02T00:00:00Z
date_updated: 2025-04-14T07:54:53Z
day: '02'
ddc:
- '540'
- '000'
department:
- _id: BiCh
- _id: GradSch
doi: 10.1038/s41467-023-41865-8
ec_funded: 1
external_id:
  arxiv:
  - '2303.07433'
  isi:
  - '001084354900008'
  pmid:
  - '37783698'
file:
- access_level: open_access
  checksum: 7d1dffd36b672ec679f08f70ce79da87
  content_type: application/pdf
  creator: dernst
  date_created: 2023-10-16T07:34:49Z
  date_updated: 2023-10-16T07:34:49Z
  file_id: '14432'
  file_name: 2023_NatureComm_Zeng.pdf
  file_size: 3194116
  relation: main_file
  success: 1
file_date_updated: 2023-10-16T07:34:49Z
has_accepted_license: '1'
intvolume: '        14'
isi: 1
language:
- iso: eng
license: https://creativecommons.org/licenses/by/4.0/
month: '10'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
  call_identifier: H2020
  grant_number: '101034413'
  name: 'IST-BRIDGE: International postdoctoral program'
publication: Nature Communications
publication_identifier:
  eissn:
  - 2041-1723
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
  link:
  - relation: software
    url: https://github.com/BingqingCheng/TiO2-water
scopus_import: '1'
status: public
title: Mechanistic insight on water dissociation on pristine low-index TiO2 surfaces
  from machine learning molecular dynamics simulations
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 14
year: '2023'
...
---
_id: '14426'
abstract:
- lang: eng
  text: To meet the physiological demands of the body, organs need to establish a
    functional tissue architecture and adequate size as the embryo develops to adulthood.
    In the liver, uni- and bipotent progenitor differentiation into hepatocytes and
    biliary epithelial cells (BECs), and their relative proportions, comprise the
    functional architecture. Yet, the contribution of individual liver progenitors
    at the organ level to both fates, and their specific proportion, is unresolved.
    Combining mathematical modelling with organ-wide, multispectral FRaeppli-NLS lineage
    tracing in zebrafish, we demonstrate that a precise BEC-to-hepatocyte ratio is
    established (i) fast, (ii) solely by heterogeneous lineage decisions from uni-
    and bipotent progenitors, and (iii) independent of subsequent cell type–specific
    proliferation. Extending lineage tracing to adulthood determined that embryonic
    cells undergo spatially heterogeneous three-dimensional growth associated with
    distinct environments. Strikingly, giant clusters comprising almost half a ventral
    lobe suggest lobe-specific dominant-like growth behaviours. We show substantial
    hepatocyte polyploidy in juveniles representing another hallmark of postembryonic
    liver growth. Our findings uncover heterogeneous progenitor contributions to tissue
    architecture-defining cell type proportions and postembryonic organ growth as
    key mechanisms forming the adult liver.
acknowledgement: "We thank the Ober group for discussion and comments on the manuscript.
  We are grateful to\r\nDr. F. Lemaigre for feedback on the manuscript and Dr. T.
  Piotrowski for invaluable support.\r\nWe thank the department of experimental medicine
  (AEM) in Copenhagen for expert fish\r\ncare. We gratefully acknowledge the DanStem
  Imaging Platform (University of Copenhagen)\r\nfor support and assistance in this
  work.\r\nThis work is supported by Novo Nordisk Foundation grant NNF17CC0027852
  (EAO);\r\nNordisk Foundation grant NNF19OC0058327 (EAO); Novo Nordisk Foundation
  grant\r\nNNF17OC0031204 (PRL); https://novonordiskfonden.dk/en/; Danish National\r\nResearch
  Foundation grant DNRF116 (EAO and AT); https://dg.dk/en/; John and Birthe Meyer\r\nFoundation
  (PRL) and European Research Council (ERC) under the EU Horizon 2020 research and
  Innovation Programme Grant Agreement No. 851288 (EH)."
article_number: e3002315
article_processing_charge: No
article_type: original
author:
- first_name: Iris A.
  full_name: Unterweger, Iris A.
  last_name: Unterweger
- first_name: Julie
  full_name: Klepstad, Julie
  last_name: Klepstad
- first_name: Edouard B
  full_name: Hannezo, Edouard B
  id: 3A9DB764-F248-11E8-B48F-1D18A9856A87
  last_name: Hannezo
  orcid: 0000-0001-6005-1561
- first_name: Pia R.
  full_name: Lundegaard, Pia R.
  last_name: Lundegaard
- first_name: Ala
  full_name: Trusina, Ala
  last_name: Trusina
- first_name: Elke A.
  full_name: Ober, Elke A.
  last_name: Ober
citation:
  ama: Unterweger IA, Klepstad J, Hannezo EB, Lundegaard PR, Trusina A, Ober EA. Lineage
    tracing identifies heterogeneous hepatoblast contribution to cell lineages and
    postembryonic organ growth dynamics. <i>PLoS Biology</i>. 2023;21(10). doi:<a
    href="https://doi.org/10.1371/journal.pbio.3002315">10.1371/journal.pbio.3002315</a>
  apa: Unterweger, I. A., Klepstad, J., Hannezo, E. B., Lundegaard, P. R., Trusina,
    A., &#38; Ober, E. A. (2023). Lineage tracing identifies heterogeneous hepatoblast
    contribution to cell lineages and postembryonic organ growth dynamics. <i>PLoS
    Biology</i>. Public Library of Science. <a href="https://doi.org/10.1371/journal.pbio.3002315">https://doi.org/10.1371/journal.pbio.3002315</a>
  chicago: Unterweger, Iris A., Julie Klepstad, Edouard B Hannezo, Pia R. Lundegaard,
    Ala Trusina, and Elke A. Ober. “Lineage Tracing Identifies Heterogeneous Hepatoblast
    Contribution to Cell Lineages and Postembryonic Organ Growth Dynamics.” <i>PLoS
    Biology</i>. Public Library of Science, 2023. <a href="https://doi.org/10.1371/journal.pbio.3002315">https://doi.org/10.1371/journal.pbio.3002315</a>.
  ieee: I. A. Unterweger, J. Klepstad, E. B. Hannezo, P. R. Lundegaard, A. Trusina,
    and E. A. Ober, “Lineage tracing identifies heterogeneous hepatoblast contribution
    to cell lineages and postembryonic organ growth dynamics,” <i>PLoS Biology</i>,
    vol. 21, no. 10. Public Library of Science, 2023.
  ista: Unterweger IA, Klepstad J, Hannezo EB, Lundegaard PR, Trusina A, Ober EA.
    2023. Lineage tracing identifies heterogeneous hepatoblast contribution to cell
    lineages and postembryonic organ growth dynamics. PLoS Biology. 21(10), e3002315.
  mla: Unterweger, Iris A., et al. “Lineage Tracing Identifies Heterogeneous Hepatoblast
    Contribution to Cell Lineages and Postembryonic Organ Growth Dynamics.” <i>PLoS
    Biology</i>, vol. 21, no. 10, e3002315, Public Library of Science, 2023, doi:<a
    href="https://doi.org/10.1371/journal.pbio.3002315">10.1371/journal.pbio.3002315</a>.
  short: I.A. Unterweger, J. Klepstad, E.B. Hannezo, P.R. Lundegaard, A. Trusina,
    E.A. Ober, PLoS Biology 21 (2023).
date_created: 2023-10-15T22:01:10Z
date_published: 2023-10-04T00:00:00Z
date_updated: 2025-04-14T07:52:27Z
day: '04'
ddc:
- '570'
department:
- _id: EdHa
doi: 10.1371/journal.pbio.3002315
ec_funded: 1
file:
- access_level: open_access
  checksum: 40a2b11b41d70a0e5939f8a52b66e389
  content_type: application/pdf
  creator: dernst
  date_created: 2023-10-16T07:20:49Z
  date_updated: 2023-10-16T07:20:49Z
  file_id: '14431'
  file_name: 2023_PloSBiology_Unterweger.pdf
  file_size: 6193110
  relation: main_file
  success: 1
file_date_updated: 2023-10-16T07:20:49Z
has_accepted_license: '1'
intvolume: '        21'
issue: '10'
language:
- iso: eng
month: '10'
oa: 1
oa_version: Published Version
project:
- _id: 05943252-7A3F-11EA-A408-12923DDC885E
  call_identifier: H2020
  grant_number: '851288'
  name: Design Principles of Branching Morphogenesis
publication: PLoS Biology
publication_identifier:
  eissn:
  - 1545-7885
publication_status: published
publisher: Public Library of Science
quality_controlled: '1'
related_material:
  link:
  - relation: software
    url: https://github.com/JulieKlepstad/LiverDevelopment
scopus_import: '1'
status: public
title: Lineage tracing identifies heterogeneous hepatoblast contribution to cell lineages
  and postembryonic organ growth dynamics
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 21
year: '2023'
...
---
_id: '14427'
abstract:
- lang: eng
  text: In the paper, we establish Squash Rigidity Theorem—the dynamical spectral
    rigidity for piecewise analytic Bunimovich squash-type stadia whose convex arcs
    are homothetic. We also establish Stadium Rigidity Theorem—the dynamical spectral
    rigidity for piecewise analytic Bunimovich stadia whose flat boundaries are a
    priori fixed. In addition, for smooth Bunimovich squash-type stadia we compute
    the Lyapunov exponents along the maximal period two orbit, as well as the value
    of the Peierls’ Barrier function from the maximal marked length spectrum associated
    to the rotation number 2n/4n+1.
acknowledgement: 'VK acknowledges a partial support by the NSF grant DMS-1402164 and
  ERC Grant #885707. Discussions with Martin Leguil and Jacopo De Simoi were very
  useful. JC visited the University of Maryland and thanks for the hospitality. Also,
  JC was partially supported by the National Key Research and Development Program
  of China (No.2022YFA1005802), the NSFC Grant 12001392 and NSF of Jiangsu BK20200850.
  H.-K. Zhang is partially supported by the National Science Foundation (DMS-2220211),
  as well as Simons Foundation Collaboration Grants for Mathematicians (706383).'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Jianyu
  full_name: Chen, Jianyu
  last_name: Chen
- first_name: Vadim
  full_name: Kaloshin, Vadim
  id: FE553552-CDE8-11E9-B324-C0EBE5697425
  last_name: Kaloshin
  orcid: 0000-0002-6051-2628
- first_name: Hong Kun
  full_name: Zhang, Hong Kun
  last_name: Zhang
citation:
  ama: Chen J, Kaloshin V, Zhang HK. Length spectrum rigidity for piecewise analytic
    Bunimovich billiards. <i>Communications in Mathematical Physics</i>. 2023;404:1-50.
    doi:<a href="https://doi.org/10.1007/s00220-023-04837-z">10.1007/s00220-023-04837-z</a>
  apa: Chen, J., Kaloshin, V., &#38; Zhang, H. K. (2023). Length spectrum rigidity
    for piecewise analytic Bunimovich billiards. <i>Communications in Mathematical
    Physics</i>. Springer Nature. <a href="https://doi.org/10.1007/s00220-023-04837-z">https://doi.org/10.1007/s00220-023-04837-z</a>
  chicago: Chen, Jianyu, Vadim Kaloshin, and Hong Kun Zhang. “Length Spectrum Rigidity
    for Piecewise Analytic Bunimovich Billiards.” <i>Communications in Mathematical
    Physics</i>. Springer Nature, 2023. <a href="https://doi.org/10.1007/s00220-023-04837-z">https://doi.org/10.1007/s00220-023-04837-z</a>.
  ieee: J. Chen, V. Kaloshin, and H. K. Zhang, “Length spectrum rigidity for piecewise
    analytic Bunimovich billiards,” <i>Communications in Mathematical Physics</i>,
    vol. 404. Springer Nature, pp. 1–50, 2023.
  ista: Chen J, Kaloshin V, Zhang HK. 2023. Length spectrum rigidity for piecewise
    analytic Bunimovich billiards. Communications in Mathematical Physics. 404, 1–50.
  mla: Chen, Jianyu, et al. “Length Spectrum Rigidity for Piecewise Analytic Bunimovich
    Billiards.” <i>Communications in Mathematical Physics</i>, vol. 404, Springer
    Nature, 2023, pp. 1–50, doi:<a href="https://doi.org/10.1007/s00220-023-04837-z">10.1007/s00220-023-04837-z</a>.
  short: J. Chen, V. Kaloshin, H.K. Zhang, Communications in Mathematical Physics
    404 (2023) 1–50.
corr_author: '1'
date_created: 2023-10-15T22:01:11Z
date_published: 2023-11-01T00:00:00Z
date_updated: 2025-04-14T07:53:45Z
day: '01'
department:
- _id: VaKa
doi: 10.1007/s00220-023-04837-z
ec_funded: 1
external_id:
  arxiv:
  - '1902.07330'
  isi:
  - '001073177200001'
intvolume: '       404'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1902.07330
month: '11'
oa: 1
oa_version: Preprint
page: 1-50
project:
- _id: 9B8B92DE-BA93-11EA-9121-9846C619BF3A
  call_identifier: H2020
  grant_number: '885707'
  name: Spectral rigidity and integrability for billiards and geodesic flows
publication: Communications in Mathematical Physics
publication_identifier:
  eissn:
  - 1432-0916
  issn:
  - 0010-3616
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Length spectrum rigidity for piecewise analytic Bunimovich billiards
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 404
year: '2023'
...
---
_id: '14428'
abstract:
- lang: eng
  text: "Suppose we have two hash functions h1 and h2, but we trust the security of
    only one of them. To mitigate this worry, we wish to build a hash combiner Ch1,h2
    which is secure so long as one of the underlying hash functions is. This question
    has been well-studied in the regime of collision resistance. In this case, concatenating
    the two hash function outputs clearly works. Unfortunately, a long series of works
    (Boneh and Boyen, CRYPTO’06; Pietrzak, Eurocrypt’07; Pietrzak, CRYPTO’08) showed
    no (noticeably) shorter combiner for collision resistance is possible.\r\nIn this
    work, we revisit this pessimistic state of affairs, motivated by the observation
    that collision-resistance is insufficient for many interesting applications of
    cryptographic hash functions anyway. We argue the right formulation of the “hash
    combiner” is to build what we call random oracle (RO) combiners, utilizing stronger
    assumptions for stronger constructions.\r\nIndeed, we circumvent the previous
    lower bounds for collision resistance by constructing a simple length-preserving
    RO combiner C˜h1,h2Z1,Z2(M)=h1(M,Z1)⊕h2(M,Z2),where Z1,Z2\r\n are random salts
    of appropriate length. We show that this extra randomness is necessary for RO
    combiners, and indeed our construction is somewhat tight with this lower bound.\r\nOn
    the negative side, we show that one cannot generically apply the composition theorem
    to further replace “monolithic” hash functions h1 and h2 by some simpler indifferentiable
    construction (such as the Merkle-Damgård transformation) from smaller components,
    such as fixed-length compression functions. Finally, despite this issue, we directly
    prove collision resistance of the Merkle-Damgård variant of our combiner, where
    h1 and h2 are replaced by iterative Merkle-Damgård hashes applied to a fixed-length
    compression function. Thus, we can still subvert the concatenation barrier for
    collision-resistance combiners while utilizing practically small fixed-length
    components underneath."
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Yevgeniy
  full_name: Dodis, Yevgeniy
  last_name: Dodis
- first_name: Niels
  full_name: Ferguson, Niels
  last_name: Ferguson
- first_name: Eli
  full_name: Goldin, Eli
  last_name: Goldin
- first_name: Peter
  full_name: Hall, Peter
  last_name: Hall
- first_name: Krzysztof Z
  full_name: Pietrzak, Krzysztof Z
  id: 3E04A7AA-F248-11E8-B48F-1D18A9856A87
  last_name: Pietrzak
  orcid: 0000-0002-9139-1654
citation:
  ama: 'Dodis Y, Ferguson N, Goldin E, Hall P, Pietrzak KZ. Random oracle combiners:
    Breaking the concatenation barrier for collision-resistance. In: <i>43rd Annual
    International Cryptology Conference</i>. Vol 14082. Springer Nature; 2023:514-546.
    doi:<a href="https://doi.org/10.1007/978-3-031-38545-2_17">10.1007/978-3-031-38545-2_17</a>'
  apa: 'Dodis, Y., Ferguson, N., Goldin, E., Hall, P., &#38; Pietrzak, K. Z. (2023).
    Random oracle combiners: Breaking the concatenation barrier for collision-resistance.
    In <i>43rd Annual International Cryptology Conference</i> (Vol. 14082, pp. 514–546).
    Santa Barbara, CA, United States: Springer Nature. <a href="https://doi.org/10.1007/978-3-031-38545-2_17">https://doi.org/10.1007/978-3-031-38545-2_17</a>'
  chicago: 'Dodis, Yevgeniy, Niels Ferguson, Eli Goldin, Peter Hall, and Krzysztof
    Z Pietrzak. “Random Oracle Combiners: Breaking the Concatenation Barrier for Collision-Resistance.”
    In <i>43rd Annual International Cryptology Conference</i>, 14082:514–46. Springer
    Nature, 2023. <a href="https://doi.org/10.1007/978-3-031-38545-2_17">https://doi.org/10.1007/978-3-031-38545-2_17</a>.'
  ieee: 'Y. Dodis, N. Ferguson, E. Goldin, P. Hall, and K. Z. Pietrzak, “Random oracle
    combiners: Breaking the concatenation barrier for collision-resistance,” in <i>43rd
    Annual International Cryptology Conference</i>, Santa Barbara, CA, United States,
    2023, vol. 14082, pp. 514–546.'
  ista: 'Dodis Y, Ferguson N, Goldin E, Hall P, Pietrzak KZ. 2023. Random oracle combiners:
    Breaking the concatenation barrier for collision-resistance. 43rd Annual International
    Cryptology Conference. CRYPTO: Advances in Cryptology, LNCS, vol. 14082, 514–546.'
  mla: 'Dodis, Yevgeniy, et al. “Random Oracle Combiners: Breaking the Concatenation
    Barrier for Collision-Resistance.” <i>43rd Annual International Cryptology Conference</i>,
    vol. 14082, Springer Nature, 2023, pp. 514–46, doi:<a href="https://doi.org/10.1007/978-3-031-38545-2_17">10.1007/978-3-031-38545-2_17</a>.'
  short: Y. Dodis, N. Ferguson, E. Goldin, P. Hall, K.Z. Pietrzak, in:, 43rd Annual
    International Cryptology Conference, Springer Nature, 2023, pp. 514–546.
conference:
  end_date: 2023-08-24
  location: Santa Barbara, CA, United States
  name: 'CRYPTO: Advances in Cryptology'
  start_date: 2023-08-20
corr_author: '1'
date_created: 2023-10-15T22:01:11Z
date_published: 2023-08-09T00:00:00Z
date_updated: 2025-09-09T13:06:18Z
day: '09'
department:
- _id: KrPi
doi: 10.1007/978-3-031-38545-2_17
external_id:
  isi:
  - '001314616100017'
intvolume: '     14082'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://eprint.iacr.org/2023/1041
month: '08'
oa: 1
oa_version: Preprint
page: 514-546
publication: 43rd Annual International Cryptology Conference
publication_identifier:
  eissn:
  - 1611-3349
  isbn:
  - '9783031385445'
  issn:
  - 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Random oracle combiners: Breaking the concatenation barrier for collision-resistance'
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 14082
year: '2023'
...
---
_id: '14441'
abstract:
- lang: eng
  text: We study the Fröhlich polaron model in R3, and establish the subleading term
    in the strong coupling asymptotics of its ground state energy, corresponding to
    the quantum corrections to the classical energy determined by the Pekar approximation.
acknowledgement: Funding from the European Union’s Horizon 2020 research and innovation
  programme under the ERC grant agreement No 694227 is acknowledged. Open access funding
  provided by Institute of Science and Technology (IST Austria).
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Morris
  full_name: Brooks, Morris
  id: B7ECF9FC-AA38-11E9-AC9A-0930E6697425
  last_name: Brooks
  orcid: 0000-0002-6249-0928
- first_name: Robert
  full_name: Seiringer, Robert
  id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
  last_name: Seiringer
  orcid: 0000-0002-6781-0521
citation:
  ama: 'Brooks M, Seiringer R. The Fröhlich Polaron at strong coupling: Part I - The
    quantum correction to the classical energy. <i>Communications in Mathematical
    Physics</i>. 2023;404:287-337. doi:<a href="https://doi.org/10.1007/s00220-023-04841-3">10.1007/s00220-023-04841-3</a>'
  apa: 'Brooks, M., &#38; Seiringer, R. (2023). The Fröhlich Polaron at strong coupling:
    Part I - The quantum correction to the classical energy. <i>Communications in
    Mathematical Physics</i>. Springer Nature. <a href="https://doi.org/10.1007/s00220-023-04841-3">https://doi.org/10.1007/s00220-023-04841-3</a>'
  chicago: 'Brooks, Morris, and Robert Seiringer. “The Fröhlich Polaron at Strong
    Coupling: Part I - The Quantum Correction to the Classical Energy.” <i>Communications
    in Mathematical Physics</i>. Springer Nature, 2023. <a href="https://doi.org/10.1007/s00220-023-04841-3">https://doi.org/10.1007/s00220-023-04841-3</a>.'
  ieee: 'M. Brooks and R. Seiringer, “The Fröhlich Polaron at strong coupling: Part
    I - The quantum correction to the classical energy,” <i>Communications in Mathematical
    Physics</i>, vol. 404. Springer Nature, pp. 287–337, 2023.'
  ista: 'Brooks M, Seiringer R. 2023. The Fröhlich Polaron at strong coupling: Part
    I - The quantum correction to the classical energy. Communications in Mathematical
    Physics. 404, 287–337.'
  mla: 'Brooks, Morris, and Robert Seiringer. “The Fröhlich Polaron at Strong Coupling:
    Part I - The Quantum Correction to the Classical Energy.” <i>Communications in
    Mathematical Physics</i>, vol. 404, Springer Nature, 2023, pp. 287–337, doi:<a
    href="https://doi.org/10.1007/s00220-023-04841-3">10.1007/s00220-023-04841-3</a>.'
  short: M. Brooks, R. Seiringer, Communications in Mathematical Physics 404 (2023)
    287–337.
corr_author: '1'
date_created: 2023-10-22T22:01:13Z
date_published: 2023-11-01T00:00:00Z
date_updated: 2025-09-09T13:12:02Z
day: '01'
ddc:
- '510'
department:
- _id: RoSe
doi: 10.1007/s00220-023-04841-3
ec_funded: 1
external_id:
  arxiv:
  - '2207.03156'
  isi:
  - '001096217400007'
file:
- access_level: open_access
  checksum: 1ae49b39247cb6b40ff75997381581b8
  content_type: application/pdf
  creator: dernst
  date_created: 2023-10-31T12:21:39Z
  date_updated: 2023-10-31T12:21:39Z
  file_id: '14477'
  file_name: 2023_CommMathPhysics_Brooks.pdf
  file_size: 832375
  relation: main_file
  success: 1
file_date_updated: 2023-10-31T12:21:39Z
has_accepted_license: '1'
intvolume: '       404'
isi: 1
language:
- iso: eng
month: '11'
oa: 1
oa_version: Published Version
page: 287-337
project:
- _id: 25C6DC12-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '694227'
  name: Analysis of quantum many-body systems
publication: Communications in Mathematical Physics
publication_identifier:
  eissn:
  - 1432-0916
  issn:
  - 0010-3616
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'The Fröhlich Polaron at strong coupling: Part I - The quantum correction to
  the classical energy'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 404
year: '2023'
...
---
OA_place: repository
OA_type: green
_id: '14442'
abstract:
- lang: eng
  text: In the presence of an obstacle, active particles condensate into a surface
    “wetting” layer due to persistent motion. If the obstacle is asymmetric, a rectification
    current arises in addition to wetting. Asymmetric geometries are therefore commonly
    used to concentrate microorganisms like bacteria and sperms. However, most studies
    neglect the fact that biological active matter is diverse, composed of individuals
    with distinct self-propulsions. Using simulations, we study a mixture of “fast”
    and “slow” active Brownian disks in two dimensions interacting with large half-disk
    obstacles. With this prototypical obstacle geometry, we analyze how the stationary
    collective behavior depends on the degree of self-propulsion “diversity,” defined
    as proportional to the difference between the self-propulsion speeds, while keeping
    the average self-propulsion speed fixed. A wetting layer rich in fast particles
    arises. The rectification current is amplified by speed diversity due to a superlinear
    dependence of rectification on self-propulsion speed, which arises from cooperative
    effects. Thus, the total rectification current cannot be obtained from an effective
    one-component active fluid with the same average self-propulsion speed, highlighting
    the importance of considering diversity in active matter.
acknowledgement: MR-V and RS are supported by Fondecyt Grant No. 1220536 and Millennium
  Science Initiative Program NCN19_170D of ANID, Chile. P.d.C. was supported by Scholarships
  Nos. 2021/10139-2 and 2022/13872-5 and ICTP-SAIFR Grant No. 2021/14335-0, all granted
  by São Paulo Research Foundation (FAPESP), Brazil.
article_number: '95'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Mauricio Nicolas
  full_name: Rojas Vega, Mauricio Nicolas
  id: 441e7207-f91f-11ec-b67c-9e6fe3d8fd6d
  last_name: Rojas Vega
- first_name: Pablo
  full_name: De Castro, Pablo
  last_name: De Castro
- first_name: Rodrigo
  full_name: Soto, Rodrigo
  last_name: Soto
citation:
  ama: Rojas Vega MN, De Castro P, Soto R. Mixtures of self-propelled particles interacting
    with asymmetric obstacles. <i>The European Physical Journal E</i>. 2023;46(10).
    doi:<a href="https://doi.org/10.1140/epje/s10189-023-00354-y">10.1140/epje/s10189-023-00354-y</a>
  apa: Rojas Vega, M. N., De Castro, P., &#38; Soto, R. (2023). Mixtures of self-propelled
    particles interacting with asymmetric obstacles. <i>The European Physical Journal
    E</i>. Springer Nature. <a href="https://doi.org/10.1140/epje/s10189-023-00354-y">https://doi.org/10.1140/epje/s10189-023-00354-y</a>
  chicago: Rojas Vega, Mauricio Nicolas, Pablo De Castro, and Rodrigo Soto. “Mixtures
    of Self-Propelled Particles Interacting with Asymmetric Obstacles.” <i>The European
    Physical Journal E</i>. Springer Nature, 2023. <a href="https://doi.org/10.1140/epje/s10189-023-00354-y">https://doi.org/10.1140/epje/s10189-023-00354-y</a>.
  ieee: M. N. Rojas Vega, P. De Castro, and R. Soto, “Mixtures of self-propelled particles
    interacting with asymmetric obstacles,” <i>The European Physical Journal E</i>,
    vol. 46, no. 10. Springer Nature, 2023.
  ista: Rojas Vega MN, De Castro P, Soto R. 2023. Mixtures of self-propelled particles
    interacting with asymmetric obstacles. The European Physical Journal E. 46(10),
    95.
  mla: Rojas Vega, Mauricio Nicolas, et al. “Mixtures of Self-Propelled Particles
    Interacting with Asymmetric Obstacles.” <i>The European Physical Journal E</i>,
    vol. 46, no. 10, 95, Springer Nature, 2023, doi:<a href="https://doi.org/10.1140/epje/s10189-023-00354-y">10.1140/epje/s10189-023-00354-y</a>.
  short: M.N. Rojas Vega, P. De Castro, R. Soto, The European Physical Journal E 46
    (2023).
corr_author: '1'
date_created: 2023-10-22T22:01:13Z
date_published: 2023-10-01T00:00:00Z
date_updated: 2025-09-09T13:08:14Z
day: '01'
department:
- _id: AnSa
doi: 10.1140/epje/s10189-023-00354-y
external_id:
  arxiv:
  - '2111.05952'
  isi:
  - '001187541900001'
  pmid:
  - '37819444'
intvolume: '        46'
isi: 1
issue: '10'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: ' https://doi.org/10.48550/arXiv.2111.05952'
month: '10'
oa: 1
oa_version: Preprint
pmid: 1
publication: The European Physical Journal E
publication_identifier:
  eissn:
  - 1292-895X
  issn:
  - 1292-8941
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Mixtures of self-propelled particles interacting with asymmetric obstacles
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 46
year: '2023'
...
---
_id: '14444'
abstract:
- lang: eng
  text: "We prove several results about substructures in Latin squares. First, we
    explain how to adapt our recent work on high-girth Steiner triple systems to the
    setting of Latin squares, resolving a conjecture of Linial that there exist Latin
    squares with arbitrarily high girth. As a consequence, we see that the number
    of order- n  Latin squares with no intercalate (i.e., no  2×2 Latin subsquare)
    is at least  (e−9/4n−o(n))n2. Equivalently,  P[N=0]≥e−n2/4−o(n2)=e−(1+o(1))EN\r\n
    , where  N is the number of intercalates in a uniformly random order- n Latin
    square. \r\nIn fact, extending recent work of Kwan, Sah, and Sawhney, we resolve
    the general large-deviation problem for intercalates in random Latin squares,
    up to constant factors in the exponent: for any constant  0<δ≤1 we have  P[N≤(1−δ)EN]=exp(−Θ(n2))
    and for any constant  δ>0 we have  P[N≥(1+δ)EN]=exp(−Θ(n4/3logn)). \r\nFinally,
    as an application of some new general tools for studying substructures in random
    Latin squares, we show that in almost all order- n Latin squares, the number of
    cuboctahedra (i.e., the number of pairs of possibly degenerate  2×2 submatrices
    with the same arrangement of symbols) is of order  n4, which is the minimum possible.
    As observed by Gowers and Long, this number can be interpreted as measuring ``how
    associative'' the quasigroup associated with the Latin square is."
acknowledgement: Sah and Sawhney were supported by NSF Graduate Research Fellowship
  Program DGE-1745302. Sah was supported by the PD Soros Fellowship. Simkin was supported
  by the Center of Mathematical Sciences and Applications at Harvard University.
article_processing_charge: Yes (in subscription journal)
article_type: original
arxiv: 1
author:
- first_name: Matthew Alan
  full_name: Kwan, Matthew Alan
  id: 5fca0887-a1db-11eb-95d1-ca9d5e0453b3
  last_name: Kwan
  orcid: 0000-0002-4003-7567
- first_name: Ashwin
  full_name: Sah, Ashwin
  last_name: Sah
- first_name: Mehtaab
  full_name: Sawhney, Mehtaab
  last_name: Sawhney
- first_name: Michael
  full_name: Simkin, Michael
  last_name: Simkin
citation:
  ama: Kwan MA, Sah A, Sawhney M, Simkin M. Substructures in Latin squares. <i>Israel
    Journal of Mathematics</i>. 2023;256(2):363-416. doi:<a href="https://doi.org/10.1007/s11856-023-2513-9">10.1007/s11856-023-2513-9</a>
  apa: Kwan, M. A., Sah, A., Sawhney, M., &#38; Simkin, M. (2023). Substructures in
    Latin squares. <i>Israel Journal of Mathematics</i>. Springer Nature. <a href="https://doi.org/10.1007/s11856-023-2513-9">https://doi.org/10.1007/s11856-023-2513-9</a>
  chicago: Kwan, Matthew Alan, Ashwin Sah, Mehtaab Sawhney, and Michael Simkin. “Substructures
    in Latin Squares.” <i>Israel Journal of Mathematics</i>. Springer Nature, 2023.
    <a href="https://doi.org/10.1007/s11856-023-2513-9">https://doi.org/10.1007/s11856-023-2513-9</a>.
  ieee: M. A. Kwan, A. Sah, M. Sawhney, and M. Simkin, “Substructures in Latin squares,”
    <i>Israel Journal of Mathematics</i>, vol. 256, no. 2. Springer Nature, pp. 363–416,
    2023.
  ista: Kwan MA, Sah A, Sawhney M, Simkin M. 2023. Substructures in Latin squares.
    Israel Journal of Mathematics. 256(2), 363–416.
  mla: Kwan, Matthew Alan, et al. “Substructures in Latin Squares.” <i>Israel Journal
    of Mathematics</i>, vol. 256, no. 2, Springer Nature, 2023, pp. 363–416, doi:<a
    href="https://doi.org/10.1007/s11856-023-2513-9">10.1007/s11856-023-2513-9</a>.
  short: M.A. Kwan, A. Sah, M. Sawhney, M. Simkin, Israel Journal of Mathematics 256
    (2023) 363–416.
date_created: 2023-10-22T22:01:14Z
date_published: 2023-09-01T00:00:00Z
date_updated: 2025-09-09T13:08:47Z
day: '01'
department:
- _id: MaKw
doi: 10.1007/s11856-023-2513-9
external_id:
  arxiv:
  - '2202.05088'
  isi:
  - '001081646400001'
intvolume: '       256'
isi: 1
issue: '2'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2202.05088
month: '09'
oa: 1
oa_version: Preprint
page: 363-416
publication: Israel Journal of Mathematics
publication_identifier:
  eissn:
  - 1565-8511
  issn:
  - 0021-2172
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Substructures in Latin squares
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 256
year: '2023'
...
---
_id: '14445'
abstract:
- lang: eng
  text: "We prove the following quantitative Borsuk–Ulam-type result (an equivariant
    analogue of Gromov’s Topological Overlap Theorem): Let X be a free ℤ/2-complex
    of dimension d with coboundary expansion at least ηk in dimension 0 ≤ k < d. Then
    for every equivariant map F: X →ℤ/2 ℝd, the fraction of d-simplices σ of X with
    0 ∈ F (σ) is at least 2−d Π d−1k=0ηk.\r\n\r\nAs an application, we show that for
    every sufficiently thick d-dimensional spherical building Y and every map f: Y
    → ℝ2d, we have f(σ) ∩ f(τ) ≠ ∅ for a constant fraction μd > 0 of pairs {σ, τ}
    of d-simplices of Y. In particular, such complexes are non-embeddable into ℝ2d,
    which proves a conjecture of Tancer and Vorwerk for sufficiently thick spherical
    buildings.\r\n\r\nWe complement these results by upper bounds on the coboundary
    expansion of two families of simplicial complexes; this indicates some limitations
    to the bounds one can obtain by straighforward applications of the quantitative
    Borsuk–Ulam theorem. Specifically, we prove\r\n\r\n• an upper bound of (d + 1)/2d
    on the normalized (d − 1)-th coboundary expansion constant of complete (d + 1)-partite
    d-dimensional complexes (under a mild divisibility assumption on the sizes of
    the parts); and\r\n\r\n• an upper bound of (d + 1)/2d + ε on the normalized (d
    − 1)-th coboundary expansion of the d-dimensional spherical building associated
    with GLd+2(Fq) for any ε > 0 and sufficiently large q. This disproves, in a rather
    strong sense, a conjecture of Lubotzky, Meshulam and Mozes."
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Uli
  full_name: Wagner, Uli
  id: 36690CA2-F248-11E8-B48F-1D18A9856A87
  last_name: Wagner
  orcid: 0000-0002-1494-0568
- first_name: Pascal
  full_name: Wild, Pascal
  id: 4C20D868-F248-11E8-B48F-1D18A9856A87
  last_name: Wild
citation:
  ama: Wagner U, Wild P. Coboundary expansion, equivariant overlap, and crossing numbers
    of simplicial complexes. <i>Israel Journal of Mathematics</i>. 2023;256(2):675-717.
    doi:<a href="https://doi.org/10.1007/s11856-023-2521-9">10.1007/s11856-023-2521-9</a>
  apa: Wagner, U., &#38; Wild, P. (2023). Coboundary expansion, equivariant overlap,
    and crossing numbers of simplicial complexes. <i>Israel Journal of Mathematics</i>.
    Springer Nature. <a href="https://doi.org/10.1007/s11856-023-2521-9">https://doi.org/10.1007/s11856-023-2521-9</a>
  chicago: Wagner, Uli, and Pascal Wild. “Coboundary Expansion, Equivariant Overlap,
    and Crossing Numbers of Simplicial Complexes.” <i>Israel Journal of Mathematics</i>.
    Springer Nature, 2023. <a href="https://doi.org/10.1007/s11856-023-2521-9">https://doi.org/10.1007/s11856-023-2521-9</a>.
  ieee: U. Wagner and P. Wild, “Coboundary expansion, equivariant overlap, and crossing
    numbers of simplicial complexes,” <i>Israel Journal of Mathematics</i>, vol. 256,
    no. 2. Springer Nature, pp. 675–717, 2023.
  ista: Wagner U, Wild P. 2023. Coboundary expansion, equivariant overlap, and crossing
    numbers of simplicial complexes. Israel Journal of Mathematics. 256(2), 675–717.
  mla: Wagner, Uli, and Pascal Wild. “Coboundary Expansion, Equivariant Overlap, and
    Crossing Numbers of Simplicial Complexes.” <i>Israel Journal of Mathematics</i>,
    vol. 256, no. 2, Springer Nature, 2023, pp. 675–717, doi:<a href="https://doi.org/10.1007/s11856-023-2521-9">10.1007/s11856-023-2521-9</a>.
  short: U. Wagner, P. Wild, Israel Journal of Mathematics 256 (2023) 675–717.
corr_author: '1'
date_created: 2023-10-22T22:01:14Z
date_published: 2023-09-01T00:00:00Z
date_updated: 2024-10-09T21:07:12Z
day: '01'
ddc:
- '510'
department:
- _id: UlWa
doi: 10.1007/s11856-023-2521-9
external_id:
  isi:
  - '001081646400010'
file:
- access_level: open_access
  checksum: fbb05619fe4b650f341cc730425dd9c3
  content_type: application/pdf
  creator: dernst
  date_created: 2023-10-31T11:20:31Z
  date_updated: 2023-10-31T11:20:31Z
  file_id: '14475'
  file_name: 2023_IsraelJourMath_Wagner.pdf
  file_size: 623787
  relation: main_file
  success: 1
file_date_updated: 2023-10-31T11:20:31Z
has_accepted_license: '1'
intvolume: '       256'
isi: 1
issue: '2'
language:
- iso: eng
month: '09'
oa: 1
oa_version: Published Version
page: 675-717
publication: Israel Journal of Mathematics
publication_identifier:
  eissn:
  - 1565-8511
  issn:
  - 0021-2172
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Coboundary expansion, equivariant overlap, and crossing numbers of simplicial
  complexes
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 256
year: '2023'
...
---
_id: '14446'
abstract:
- lang: eng
  text: Recent work has paid close attention to the first principle of Granger causality,
    according to which cause precedes effect. In this context, the question may arise
    whether the detected direction of causality also reverses after the time reversal
    of unidirectionally coupled data. Recently, it has been shown that for unidirectionally
    causally connected autoregressive (AR) processes X → Y, after time reversal of
    data, the opposite causal direction Y → X is indeed detected, although typically
    as part of the bidirectional X↔ Y link. As we argue here, the answer is different
    when the measured data are not from AR processes but from linked deterministic
    systems. When the goal is the usual forward data analysis, cross-mapping-like
    approaches correctly detect X → Y, while Granger causality-like approaches, which
    should not be used for deterministic time series, detect causal independence X
    → Y. The results of backward causal analysis depend on the predictability of the
    reversed data. Unlike AR processes, observables from deterministic dynamical systems,
    even complex nonlinear ones, can be predicted well forward, while backward predictions
    can be difficult (notably when the time reversal of a function leads to one-to-many
    relations). To address this problem, we propose an approach based on models that
    provide multiple candidate predictions for the target, combined with a loss function
    that consideres only the best candidate. The resulting good forward and backward
    predictability supports the view that unidirectionally causally linked deterministic
    dynamical systems X → Y can be expected to detect the same link both before and
    after time reversal.
acknowledgement: The work was supported by the Scientific Grant Agency of the Ministry
  of Education of the Slovak Republic and the Slovak Academy of Sciences, projects
  APVV-21-0216, VEGA2-0096-21 and VEGA 2-0023-22.
article_processing_charge: Yes
article_type: original
author:
- first_name: Jozef
  full_name: Jakubík, Jozef
  last_name: Jakubík
- first_name: Phuong
  full_name: Bui Thi Mai, Phuong
  id: 3EC6EE64-F248-11E8-B48F-1D18A9856A87
  last_name: Bui Thi Mai
- first_name: Martina
  full_name: Chvosteková, Martina
  last_name: Chvosteková
- first_name: Anna
  full_name: Krakovská, Anna
  last_name: Krakovská
citation:
  ama: Jakubík J, Phuong M, Chvosteková M, Krakovská A. Against the flow of time with
    multi-output models. <i>Measurement Science Review</i>. 2023;23(4):175-183. doi:<a
    href="https://doi.org/10.2478/msr-2023-0023">10.2478/msr-2023-0023</a>
  apa: Jakubík, J., Phuong, M., Chvosteková, M., &#38; Krakovská, A. (2023). Against
    the flow of time with multi-output models. <i>Measurement Science Review</i>.
    Sciendo. <a href="https://doi.org/10.2478/msr-2023-0023">https://doi.org/10.2478/msr-2023-0023</a>
  chicago: Jakubík, Jozef, Mary Phuong, Martina Chvosteková, and Anna Krakovská. “Against
    the Flow of Time with Multi-Output Models.” <i>Measurement Science Review</i>.
    Sciendo, 2023. <a href="https://doi.org/10.2478/msr-2023-0023">https://doi.org/10.2478/msr-2023-0023</a>.
  ieee: J. Jakubík, M. Phuong, M. Chvosteková, and A. Krakovská, “Against the flow
    of time with multi-output models,” <i>Measurement Science Review</i>, vol. 23,
    no. 4. Sciendo, pp. 175–183, 2023.
  ista: Jakubík J, Phuong M, Chvosteková M, Krakovská A. 2023. Against the flow of
    time with multi-output models. Measurement Science Review. 23(4), 175–183.
  mla: Jakubík, Jozef, et al. “Against the Flow of Time with Multi-Output Models.”
    <i>Measurement Science Review</i>, vol. 23, no. 4, Sciendo, 2023, pp. 175–83,
    doi:<a href="https://doi.org/10.2478/msr-2023-0023">10.2478/msr-2023-0023</a>.
  short: J. Jakubík, M. Phuong, M. Chvosteková, A. Krakovská, Measurement Science
    Review 23 (2023) 175–183.
date_created: 2023-10-22T22:01:15Z
date_published: 2023-08-01T00:00:00Z
date_updated: 2025-09-09T13:10:30Z
day: '01'
ddc:
- '510'
department:
- _id: ChLa
doi: 10.2478/msr-2023-0023
external_id:
  isi:
  - '001070829600005'
file:
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  file_size: 2639783
  relation: main_file
  success: 1
file_date_updated: 2023-10-31T12:07:23Z
has_accepted_license: '1'
intvolume: '        23'
isi: 1
issue: '4'
language:
- iso: eng
license: https://creativecommons.org/licenses/by-nc-nd/4.0/
month: '08'
oa: 1
oa_version: Published Version
page: 175-183
publication: Measurement Science Review
publication_identifier:
  eissn:
  - 1335-8871
publication_status: published
publisher: Sciendo
quality_controlled: '1'
scopus_import: '1'
status: public
title: Against the flow of time with multi-output models
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 23
year: '2023'
...
---
_id: '14448'
abstract:
- lang: eng
  text: We consider the problem of solving LP relaxations of MAP-MRF inference problems,
    and in particular the method proposed recently in [16], [35]. As a key computational
    subroutine, it uses a variant of the Frank-Wolfe (FW) method to minimize a smooth
    convex function over a combinatorial polytope. We propose an efficient implementation
    of this subroutine based on in-face Frank-Wolfe directions, introduced in [4]
    in a different context. More generally, we define an abstract data structure for
    a combinatorial subproblem that enables in-face FW directions, and describe its
    specialization for tree-structured MAP-MRF inference subproblems. Experimental
    results indicate that the resulting method is the current state-of-art LP solver
    for some classes of problems. Our code is available at pub.ist.ac.at/~vnk/papers/IN-FACE-FW.html.
article_processing_charge: No
arxiv: 1
author:
- first_name: Vladimir
  full_name: Kolmogorov, Vladimir
  id: 3D50B0BA-F248-11E8-B48F-1D18A9856A87
  last_name: Kolmogorov
citation:
  ama: 'Kolmogorov V. Solving relaxations of MAP-MRF problems: Combinatorial in-face
    Frank-Wolfe directions. In: <i>Proceedings of the IEEE Computer Society Conference
    on Computer Vision and Pattern Recognition</i>. Vol 2023. IEEE; 2023:11980-11989.
    doi:<a href="https://doi.org/10.1109/CVPR52729.2023.01153">10.1109/CVPR52729.2023.01153</a>'
  apa: 'Kolmogorov, V. (2023). Solving relaxations of MAP-MRF problems: Combinatorial
    in-face Frank-Wolfe directions. In <i>Proceedings of the IEEE Computer Society
    Conference on Computer Vision and Pattern Recognition</i> (Vol. 2023, pp. 11980–11989).
    Vancouver, Canada: IEEE. <a href="https://doi.org/10.1109/CVPR52729.2023.01153">https://doi.org/10.1109/CVPR52729.2023.01153</a>'
  chicago: 'Kolmogorov, Vladimir. “Solving Relaxations of MAP-MRF Problems: Combinatorial
    in-Face Frank-Wolfe Directions.” In <i>Proceedings of the IEEE Computer Society
    Conference on Computer Vision and Pattern Recognition</i>, 2023:11980–89. IEEE,
    2023. <a href="https://doi.org/10.1109/CVPR52729.2023.01153">https://doi.org/10.1109/CVPR52729.2023.01153</a>.'
  ieee: 'V. Kolmogorov, “Solving relaxations of MAP-MRF problems: Combinatorial in-face
    Frank-Wolfe directions,” in <i>Proceedings of the IEEE Computer Society Conference
    on Computer Vision and Pattern Recognition</i>, Vancouver, Canada, 2023, vol.
    2023, pp. 11980–11989.'
  ista: 'Kolmogorov V. 2023. Solving relaxations of MAP-MRF problems: Combinatorial
    in-face Frank-Wolfe directions. Proceedings of the IEEE Computer Society Conference
    on Computer Vision and Pattern Recognition. CVPR: Conference on Computer Vision
    and Pattern Recognition vol. 2023, 11980–11989.'
  mla: 'Kolmogorov, Vladimir. “Solving Relaxations of MAP-MRF Problems: Combinatorial
    in-Face Frank-Wolfe Directions.” <i>Proceedings of the IEEE Computer Society Conference
    on Computer Vision and Pattern Recognition</i>, vol. 2023, IEEE, 2023, pp. 11980–89,
    doi:<a href="https://doi.org/10.1109/CVPR52729.2023.01153">10.1109/CVPR52729.2023.01153</a>.'
  short: V. Kolmogorov, in:, Proceedings of the IEEE Computer Society Conference on
    Computer Vision and Pattern Recognition, IEEE, 2023, pp. 11980–11989.
conference:
  end_date: 2023-06-24
  location: Vancouver, Canada
  name: 'CVPR: Conference on Computer Vision and Pattern Recognition'
  start_date: 2023-06-17
corr_author: '1'
date_created: 2023-10-22T22:01:16Z
date_published: 2023-08-22T00:00:00Z
date_updated: 2025-09-09T13:09:58Z
day: '22'
department:
- _id: VlKo
doi: 10.1109/CVPR52729.2023.01153
external_id:
  arxiv:
  - '2010.09567'
  isi:
  - '001062522104029'
intvolume: '      2023'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: ' https://doi.org/10.48550/arXiv.2010.09567'
month: '08'
oa: 1
oa_version: Preprint
page: 11980-11989
publication: Proceedings of the IEEE Computer Society Conference on Computer Vision
  and Pattern Recognition
publication_identifier:
  isbn:
  - '9798350301298'
  issn:
  - 1063-6919
publication_status: published
publisher: IEEE
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Solving relaxations of MAP-MRF problems: Combinatorial in-face Frank-Wolfe
  directions'
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 2023
year: '2023'
...
---
_id: '14449'
abstract:
- lang: eng
  text: The rapid development of machine learning (ML) techniques has opened up the
    data-dense field of microbiome research for novel therapeutic, diagnostic, and
    prognostic applications targeting a wide range of disorders, which could substantially
    improve healthcare practices in the era of precision medicine. However, several
    challenges must be addressed to exploit the benefits of ML in this field fully.
    In particular, there is a need to establish “gold standard” protocols for conducting
    ML analysis experiments and improve interactions between microbiome researchers
    and ML experts. The Machine Learning Techniques in Human Microbiome Studies (ML4Microbiome)
    COST Action CA18131 is a European network established in 2019 to promote collaboration
    between discovery-oriented microbiome researchers and data-driven ML experts to
    optimize and standardize ML approaches for microbiome analysis. This perspective
    paper presents the key achievements of ML4Microbiome, which include identifying
    predictive and discriminatory ‘omics’ features, improving repeatability and comparability,
    developing automation procedures, and defining priority areas for the novel development
    of ML methods targeting the microbiome. The insights gained from ML4Microbiome
    will help to maximize the potential of ML in microbiome research and pave the
    way for new and improved healthcare practices.
acknowledgement: "This study is based upon work from COST Action ML4Microbiome “Statistical
  and machine learning techniques in human microbiome studies” (CA18131), supported
  by COST (European Cooperation in Science and Technology), www.cost.eu. MB acknowledges
  support through the Metagenopolis grant ANR-11-DPBS-0001. IM-I acknowledges support
  by the “Miguel Servet Type II” program (CPII21/00013) of the ISCIII-Madrid (Spain),
  co-financed by the FEDER.\r\nThe authors are grateful to all COST Action CA18131
  “Statistical and machine learning techniques in human microbiome studies” members
  for their contribution to the COST Action objectives, and to COST (European Cooperation
  in Science and Technology) for the economic support, www.cost.eu. WG2 and WG3 thank
  Emmanuelle Le Chatelier and Pauline Barbet (Université Paris-Saclay, INRAE, MetaGenoPolis,
  78350, Jouy-en-Josas, France) for preparing the shotgun CRC benchmark dataset."
article_number: '1257002'
article_processing_charge: Yes
article_type: original
author:
- first_name: Domenica
  full_name: D’Elia, Domenica
  last_name: D’Elia
- first_name: Jaak
  full_name: Truu, Jaak
  last_name: Truu
- first_name: Leo
  full_name: Lahti, Leo
  last_name: Lahti
- first_name: Magali
  full_name: Berland, Magali
  last_name: Berland
- first_name: Georgios
  full_name: Papoutsoglou, Georgios
  last_name: Papoutsoglou
- first_name: Michelangelo
  full_name: Ceci, Michelangelo
  last_name: Ceci
- first_name: Aldert
  full_name: Zomer, Aldert
  last_name: Zomer
- first_name: Marta B.
  full_name: Lopes, Marta B.
  last_name: Lopes
- first_name: Eliana
  full_name: Ibrahimi, Eliana
  last_name: Ibrahimi
- first_name: Aleksandra
  full_name: Gruca, Aleksandra
  last_name: Gruca
- first_name: Alina
  full_name: Nechyporenko, Alina
  last_name: Nechyporenko
- first_name: Marcus
  full_name: Frohme, Marcus
  last_name: Frohme
- first_name: Thomas
  full_name: Klammsteiner, Thomas
  last_name: Klammsteiner
- first_name: Enrique Carrillo De Santa
  full_name: Pau, Enrique Carrillo De Santa
  last_name: Pau
- first_name: Laura Judith
  full_name: Marcos-Zambrano, Laura Judith
  last_name: Marcos-Zambrano
- first_name: Karel
  full_name: Hron, Karel
  last_name: Hron
- first_name: Gianvito
  full_name: Pio, Gianvito
  last_name: Pio
- first_name: Andrea
  full_name: Simeon, Andrea
  last_name: Simeon
- first_name: Ramona
  full_name: Suharoschi, Ramona
  last_name: Suharoschi
- first_name: Isabel
  full_name: Moreno-Indias, Isabel
  last_name: Moreno-Indias
- first_name: Andriy
  full_name: Temko, Andriy
  last_name: Temko
- first_name: Miroslava
  full_name: Nedyalkova, Miroslava
  last_name: Nedyalkova
- first_name: Elena Simona
  full_name: Apostol, Elena Simona
  last_name: Apostol
- first_name: Ciprian Octavian
  full_name: Truică, Ciprian Octavian
  last_name: Truică
- first_name: Rajesh
  full_name: Shigdel, Rajesh
  last_name: Shigdel
- first_name: Jasminka Hasić
  full_name: Telalović, Jasminka Hasić
  last_name: Telalović
- first_name: Erik
  full_name: Bongcam-Rudloff, Erik
  last_name: Bongcam-Rudloff
- first_name: Piotr
  full_name: Przymus, Piotr
  last_name: Przymus
- first_name: Naida Babić
  full_name: Jordamović, Naida Babić
  last_name: Jordamović
- first_name: Laurent
  full_name: Falquet, Laurent
  last_name: Falquet
- first_name: Sonia
  full_name: Tarazona, Sonia
  last_name: Tarazona
- first_name: Alexia
  full_name: Sampri, Alexia
  last_name: Sampri
- first_name: Gaetano
  full_name: Isola, Gaetano
  last_name: Isola
- first_name: David
  full_name: Pérez-Serrano, David
  last_name: Pérez-Serrano
- first_name: Vladimir
  full_name: Trajkovik, Vladimir
  last_name: Trajkovik
- first_name: Lubos
  full_name: Klucar, Lubos
  last_name: Klucar
- first_name: Tatjana
  full_name: Loncar-Turukalo, Tatjana
  last_name: Loncar-Turukalo
- first_name: Aki S.
  full_name: Havulinna, Aki S.
  last_name: Havulinna
- first_name: Christian
  full_name: Jansen, Christian
  id: 837b2259-bcc9-11ed-a196-ae55927bc6e2
  last_name: Jansen
- first_name: Randi J.
  full_name: Bertelsen, Randi J.
  last_name: Bertelsen
- first_name: Marcus Joakim
  full_name: Claesson, Marcus Joakim
  last_name: Claesson
citation:
  ama: 'D’Elia D, Truu J, Lahti L, et al. Advancing microbiome research with machine
    learning: Key findings from the ML4Microbiome COST action. <i>Frontiers in Microbiology</i>.
    2023;14. doi:<a href="https://doi.org/10.3389/fmicb.2023.1257002">10.3389/fmicb.2023.1257002</a>'
  apa: 'D’Elia, D., Truu, J., Lahti, L., Berland, M., Papoutsoglou, G., Ceci, M.,
    … Claesson, M. J. (2023). Advancing microbiome research with machine learning:
    Key findings from the ML4Microbiome COST action. <i>Frontiers in Microbiology</i>.
    Frontiers. <a href="https://doi.org/10.3389/fmicb.2023.1257002">https://doi.org/10.3389/fmicb.2023.1257002</a>'
  chicago: 'D’Elia, Domenica, Jaak Truu, Leo Lahti, Magali Berland, Georgios Papoutsoglou,
    Michelangelo Ceci, Aldert Zomer, et al. “Advancing Microbiome Research with Machine
    Learning: Key Findings from the ML4Microbiome COST Action.” <i>Frontiers in Microbiology</i>.
    Frontiers, 2023. <a href="https://doi.org/10.3389/fmicb.2023.1257002">https://doi.org/10.3389/fmicb.2023.1257002</a>.'
  ieee: 'D. D’Elia <i>et al.</i>, “Advancing microbiome research with machine learning:
    Key findings from the ML4Microbiome COST action,” <i>Frontiers in Microbiology</i>,
    vol. 14. Frontiers, 2023.'
  ista: 'D’Elia D, Truu J, Lahti L, Berland M, Papoutsoglou G, Ceci M, Zomer A, Lopes
    MB, Ibrahimi E, Gruca A, Nechyporenko A, Frohme M, Klammsteiner T, Pau ECDS, Marcos-Zambrano
    LJ, Hron K, Pio G, Simeon A, Suharoschi R, Moreno-Indias I, Temko A, Nedyalkova
    M, Apostol ES, Truică CO, Shigdel R, Telalović JH, Bongcam-Rudloff E, Przymus
    P, Jordamović NB, Falquet L, Tarazona S, Sampri A, Isola G, Pérez-Serrano D, Trajkovik
    V, Klucar L, Loncar-Turukalo T, Havulinna AS, Jansen C, Bertelsen RJ, Claesson
    MJ. 2023. Advancing microbiome research with machine learning: Key findings from
    the ML4Microbiome COST action. Frontiers in Microbiology. 14, 1257002.'
  mla: 'D’Elia, Domenica, et al. “Advancing Microbiome Research with Machine Learning:
    Key Findings from the ML4Microbiome COST Action.” <i>Frontiers in Microbiology</i>,
    vol. 14, 1257002, Frontiers, 2023, doi:<a href="https://doi.org/10.3389/fmicb.2023.1257002">10.3389/fmicb.2023.1257002</a>.'
  short: D. D’Elia, J. Truu, L. Lahti, M. Berland, G. Papoutsoglou, M. Ceci, A. Zomer,
    M.B. Lopes, E. Ibrahimi, A. Gruca, A. Nechyporenko, M. Frohme, T. Klammsteiner,
    E.C.D.S. Pau, L.J. Marcos-Zambrano, K. Hron, G. Pio, A. Simeon, R. Suharoschi,
    I. Moreno-Indias, A. Temko, M. Nedyalkova, E.S. Apostol, C.O. Truică, R. Shigdel,
    J.H. Telalović, E. Bongcam-Rudloff, P. Przymus, N.B. Jordamović, L. Falquet, S.
    Tarazona, A. Sampri, G. Isola, D. Pérez-Serrano, V. Trajkovik, L. Klucar, T. Loncar-Turukalo,
    A.S. Havulinna, C. Jansen, R.J. Bertelsen, M.J. Claesson, Frontiers in Microbiology
    14 (2023).
date_created: 2023-10-22T22:01:16Z
date_published: 2023-09-25T00:00:00Z
date_updated: 2023-12-13T13:07:21Z
day: '25'
ddc:
- '000'
department:
- _id: ScienComp
doi: 10.3389/fmicb.2023.1257002
external_id:
  isi:
  - '001080536000001'
  pmid:
  - '37808321'
file:
- access_level: open_access
  checksum: 6c0acdd8fa111a699826957b8dff19d5
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  creator: dernst
  date_created: 2023-10-30T13:38:48Z
  date_updated: 2023-10-30T13:38:48Z
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language:
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month: '09'
oa: 1
oa_version: Published Version
pmid: 1
publication: Frontiers in Microbiology
publication_identifier:
  eissn:
  - 1664-302X
publication_status: published
publisher: Frontiers
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Advancing microbiome research with machine learning: Key findings from the
  ML4Microbiome COST action'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 14
year: '2023'
...
---
_id: '14452'
abstract:
- lang: eng
  text: The classical infinitesimal model is a simple and robust model for the inheritance
    of quantitative traits. In this model, a quantitative trait is expressed as the
    sum of a genetic and an environmental component, and the genetic component of
    offspring traits within a family follows a normal distribution around the average
    of the parents’ trait values, and has a variance that is independent of the parental
    traits. In previous work, we showed that when trait values are determined by the
    sum of a large number of additive Mendelian factors, each of small effect, one
    can justify the infinitesimal model as a limit of Mendelian inheritance. In this
    paper, we show that this result extends to include dominance. We define the model
    in terms of classical quantities of quantitative genetics, before justifying it
    as a limit of Mendelian inheritance as the number, M, of underlying loci tends
    to infinity. As in the additive case, the multivariate normal distribution of
    trait values across the pedigree can be expressed in terms of variance components
    in an ancestral population and probabilities of identity by descent determined
    by the pedigree. Now, with just first-order dominance effects, we require two-,
    three-, and four-way identities. We also show that, even if we condition on parental
    trait values, the “shared” and “residual” components of trait values within each
    family will be asymptotically normally distributed as the number of loci tends
    to infinity, with an error of order 1/M−−√⁠. We illustrate our results with some
    numerical examples.
acknowledgement: NHB was supported in part by ERC Grants 250152 and 101055327. AV
  was partly supported by the chaire Modélisation Mathématique et Biodiversité of
  Veolia Environment—Ecole Polytechnique—Museum National d’Histoire Naturelle—Fondation
  X.
article_number: iyad133
article_processing_charge: Yes (in subscription journal)
article_type: original
arxiv: 1
author:
- first_name: Nicholas H
  full_name: Barton, Nicholas H
  id: 4880FE40-F248-11E8-B48F-1D18A9856A87
  last_name: Barton
  orcid: 0000-0002-8548-5240
- first_name: Alison M.
  full_name: Etheridge, Alison M.
  last_name: Etheridge
- first_name: Amandine
  full_name: Véber, Amandine
  last_name: Véber
citation:
  ama: Barton NH, Etheridge AM, Véber A. The infinitesimal model with dominance. <i>Genetics</i>.
    2023;225(2). doi:<a href="https://doi.org/10.1093/genetics/iyad133">10.1093/genetics/iyad133</a>
  apa: Barton, N. H., Etheridge, A. M., &#38; Véber, A. (2023). The infinitesimal
    model with dominance. <i>Genetics</i>. Oxford University Press. <a href="https://doi.org/10.1093/genetics/iyad133">https://doi.org/10.1093/genetics/iyad133</a>
  chicago: Barton, Nicholas H, Alison M. Etheridge, and Amandine Véber. “The Infinitesimal
    Model with Dominance.” <i>Genetics</i>. Oxford University Press, 2023. <a href="https://doi.org/10.1093/genetics/iyad133">https://doi.org/10.1093/genetics/iyad133</a>.
  ieee: N. H. Barton, A. M. Etheridge, and A. Véber, “The infinitesimal model with
    dominance,” <i>Genetics</i>, vol. 225, no. 2. Oxford University Press, 2023.
  ista: Barton NH, Etheridge AM, Véber A. 2023. The infinitesimal model with dominance.
    Genetics. 225(2), iyad133.
  mla: Barton, Nicholas H., et al. “The Infinitesimal Model with Dominance.” <i>Genetics</i>,
    vol. 225, no. 2, iyad133, Oxford University Press, 2023, doi:<a href="https://doi.org/10.1093/genetics/iyad133">10.1093/genetics/iyad133</a>.
  short: N.H. Barton, A.M. Etheridge, A. Véber, Genetics 225 (2023).
date_created: 2023-10-29T23:01:15Z
date_published: 2023-10-01T00:00:00Z
date_updated: 2025-09-09T13:07:07Z
day: '01'
ddc:
- '570'
department:
- _id: NiBa
doi: 10.1093/genetics/iyad133
ec_funded: 1
external_id:
  arxiv:
  - '2211.03515'
  isi:
  - '001148042000008'
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  date_updated: 2023-10-30T12:57:53Z
  file_id: '14469'
  file_name: 2023_Genetics_Barton.pdf
  file_size: 1439032
  relation: main_file
  success: 1
file_date_updated: 2023-10-30T12:57:53Z
has_accepted_license: '1'
intvolume: '       225'
isi: 1
issue: '2'
language:
- iso: eng
month: '10'
oa: 1
oa_version: Published Version
project:
- _id: 25B07788-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '250152'
  name: Limits to selection in biology and in evolutionary computation
- _id: bd6958e0-d553-11ed-ba76-86eba6a76c00
  grant_number: '101055327'
  name: Understanding the evolution of continuous genomes
publication: Genetics
publication_identifier:
  eissn:
  - 1943-2631
  issn:
  - 0016-6731
publication_status: published
publisher: Oxford University Press
quality_controlled: '1'
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  - id: '12949'
    relation: research_data
    status: public
scopus_import: '1'
status: public
title: The infinitesimal model with dominance
tmp:
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  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 225
year: '2023'
...
---
_id: '14453'
abstract:
- lang: eng
  text: Squall lines are substantially influenced by the interaction of low-level
    shear with cold pools associated with convective downdrafts. Beyond an optimal
    shear amplitude, squall lines tend to orient themselves at an angle with respect
    to the low-level shear. While the mechanisms behind squall line orientation seem
    to be increasingly well understood, uncertainties remain on the implications of
    this orientation. Roca and Fiolleau (2020, https://doi.org/10.1038/s43247-020-00015-4)
    show that long lived mesoscale convective systems, including squall lines, are
    disproportionately involved in rainfall extremes in the tropics. This article
    investigates the influence of the interaction between low-level shear and squall
    line outflow on squall line generated precipitation extrema in the tropics. Using
    a cloud resolving model, simulated squall lines in radiative convective equilibrium
    amid a shear-dominated regime (super optimal), a balanced regime (optimal), and
    an outflow dominated regime (suboptimal). Our results show that precipitation
    extremes in squall lines are 40% more intense in the case of optimal shear and
    remain 30% superior in the superoptimal regime relative to a disorganized case.
    With a theoretical scaling of precipitation extremes (C. Muller & Takayabu, 2020,
    https://doi.org/10.1088/1748-9326/ab7130), we show that the condensation rates
    control the amplification of precipitation extremes in tropical squall lines,
    mainly due to its change in vertical mass flux (dynamic component). The reduction
    of dilution by entrainment explains half of this change, consistent with Mulholland
    et al. (2021, https://doi.org/10.1175/jas-d-20-0299.1). The other half is explained
    by increased cloud-base velocity intensity in optimal and superoptimal squall
    lines.
acknowledgement: The authors gratefully acknowledge funding from the European Research
  Council under the European Union's Horizon 2020 research and innovation program
  (Project CLUSTER, Grant Agreement No. 805041). This work is also supported by a
  PhD fellowship funded by the Ecole Normale Supérieure de Paris-Saclay. Authors are
  also grateful to Benjamin Filider, who was of great help and support in the development
  of ideas. Eventually, we would like to thank Martin Singh, John M. Peters and an
  anonymous reviewer for their valuable comments and suggestions, which greatly improved
  the quality of the manuscript.
article_number: e2022MS003477
article_processing_charge: Yes
article_type: original
author:
- first_name: Sophie
  full_name: Abramian, Sophie
  last_name: Abramian
- first_name: Caroline J
  full_name: Muller, Caroline J
  id: f978ccb0-3f7f-11eb-b193-b0e2bd13182b
  last_name: Muller
  orcid: 0000-0001-5836-5350
- first_name: Camille
  full_name: Risi, Camille
  last_name: Risi
citation:
  ama: Abramian S, Muller CJ, Risi C. Extreme precipitation in tropical squall lines.
    <i>Journal of Advances in Modeling Earth Systems</i>. 2023;15(10). doi:<a href="https://doi.org/10.1029/2022MS003477">10.1029/2022MS003477</a>
  apa: Abramian, S., Muller, C. J., &#38; Risi, C. (2023). Extreme precipitation in
    tropical squall lines. <i>Journal of Advances in Modeling Earth Systems</i>. Wiley.
    <a href="https://doi.org/10.1029/2022MS003477">https://doi.org/10.1029/2022MS003477</a>
  chicago: Abramian, Sophie, Caroline J Muller, and Camille Risi. “Extreme Precipitation
    in Tropical Squall Lines.” <i>Journal of Advances in Modeling Earth Systems</i>.
    Wiley, 2023. <a href="https://doi.org/10.1029/2022MS003477">https://doi.org/10.1029/2022MS003477</a>.
  ieee: S. Abramian, C. J. Muller, and C. Risi, “Extreme precipitation in tropical
    squall lines,” <i>Journal of Advances in Modeling Earth Systems</i>, vol. 15,
    no. 10. Wiley, 2023.
  ista: Abramian S, Muller CJ, Risi C. 2023. Extreme precipitation in tropical squall
    lines. Journal of Advances in Modeling Earth Systems. 15(10), e2022MS003477.
  mla: Abramian, Sophie, et al. “Extreme Precipitation in Tropical Squall Lines.”
    <i>Journal of Advances in Modeling Earth Systems</i>, vol. 15, no. 10, e2022MS003477,
    Wiley, 2023, doi:<a href="https://doi.org/10.1029/2022MS003477">10.1029/2022MS003477</a>.
  short: S. Abramian, C.J. Muller, C. Risi, Journal of Advances in Modeling Earth
    Systems 15 (2023).
date_created: 2023-10-29T23:01:15Z
date_published: 2023-10-01T00:00:00Z
date_updated: 2024-11-05T09:00:44Z
day: '01'
ddc:
- '550'
department:
- _id: CaMu
doi: 10.1029/2022MS003477
ec_funded: 1
external_id:
  isi:
  - '001084933600001'
file:
- access_level: open_access
  checksum: 43e6a1a35b663843c7d3f8d0caaca1a5
  content_type: application/pdf
  creator: dernst
  date_created: 2023-10-30T13:31:42Z
  date_updated: 2023-10-30T13:31:42Z
  file_id: '14470'
  file_name: 2023_JAMES_Abramian.pdf
  file_size: 1975210
  relation: main_file
  success: 1
file_date_updated: 2023-10-30T13:31:42Z
has_accepted_license: '1'
intvolume: '        15'
isi: 1
issue: '10'
language:
- iso: eng
month: '10'
oa: 1
oa_version: Published Version
project:
- _id: 629205d8-2b32-11ec-9570-e1356ff73576
  call_identifier: H2020
  grant_number: '805041'
  name: Organization of CLoUdS, and implications of Tropical  cyclones and for the
    Energetics of the tropics, in current and waRming climate
publication: Journal of Advances in Modeling Earth Systems
publication_identifier:
  eissn:
  - 1942-2466
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: Extreme precipitation in tropical squall lines
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 15
year: '2023'
...
---
_id: '14454'
abstract:
- lang: eng
  text: As AI and machine-learned software are used increasingly for making decisions
    that affect humans, it is imperative that they remain fair and unbiased in their
    decisions. To complement design-time bias mitigation measures, runtime verification
    techniques have been introduced recently to monitor the algorithmic fairness of
    deployed systems. Previous monitoring techniques assume full observability of
    the states of the (unknown) monitored system. Moreover, they can monitor only
    fairness properties that are specified as arithmetic expressions over the probabilities
    of different events. In this work, we extend fairness monitoring to systems modeled
    as partially observed Markov chains (POMC), and to specifications containing arithmetic
    expressions over the expected values of numerical functions on event sequences.
    The only assumptions we make are that the underlying POMC is aperiodic and starts
    in the stationary distribution, with a bound on its mixing time being known. These
    assumptions enable us to estimate a given property for the entire distribution
    of possible executions of the monitored POMC, by observing only a single execution.
    Our monitors observe a long run of the system and, after each new observation,
    output updated PAC-estimates of how fair or biased the system is. The monitors
    are computationally lightweight and, using a prototype implementation, we demonstrate
    their effectiveness on several real-world examples.
acknowledgement: 'This work is supported by the European Research Council under Grant
  No.: ERC-2020-AdG 101020093.'
alternative_title:
- LNCS
article_processing_charge: No
arxiv: 1
author:
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000-0002-2985-7724
- first_name: Konstantin
  full_name: Kueffner, Konstantin
  id: 8121a2d0-dc85-11ea-9058-af578f3b4515
  last_name: Kueffner
  orcid: 0000-0001-8974-2542
- first_name: Kaushik
  full_name: Mallik, Kaushik
  id: 0834ff3c-6d72-11ec-94e0-b5b0a4fb8598
  last_name: Mallik
  orcid: 0000-0001-9864-7475
citation:
  ama: 'Henzinger TA, Kueffner K, Mallik K. Monitoring algorithmic fairness under
    partial observations. In: <i>23rd International Conference on Runtime Verification</i>.
    Vol 14245. Springer Nature; 2023:291-311. doi:<a href="https://doi.org/10.1007/978-3-031-44267-4_15">10.1007/978-3-031-44267-4_15</a>'
  apa: 'Henzinger, T. A., Kueffner, K., &#38; Mallik, K. (2023). Monitoring algorithmic
    fairness under partial observations. In <i>23rd International Conference on Runtime
    Verification</i> (Vol. 14245, pp. 291–311). Thessaloniki, Greece: Springer Nature.
    <a href="https://doi.org/10.1007/978-3-031-44267-4_15">https://doi.org/10.1007/978-3-031-44267-4_15</a>'
  chicago: Henzinger, Thomas A, Konstantin Kueffner, and Kaushik Mallik. “Monitoring
    Algorithmic Fairness under Partial Observations.” In <i>23rd International Conference
    on Runtime Verification</i>, 14245:291–311. Springer Nature, 2023. <a href="https://doi.org/10.1007/978-3-031-44267-4_15">https://doi.org/10.1007/978-3-031-44267-4_15</a>.
  ieee: T. A. Henzinger, K. Kueffner, and K. Mallik, “Monitoring algorithmic fairness
    under partial observations,” in <i>23rd International Conference on Runtime Verification</i>,
    Thessaloniki, Greece, 2023, vol. 14245, pp. 291–311.
  ista: 'Henzinger TA, Kueffner K, Mallik K. 2023. Monitoring algorithmic fairness
    under partial observations. 23rd International Conference on Runtime Verification.
    RV: Conference on Runtime Verification, LNCS, vol. 14245, 291–311.'
  mla: Henzinger, Thomas A., et al. “Monitoring Algorithmic Fairness under Partial
    Observations.” <i>23rd International Conference on Runtime Verification</i>, vol.
    14245, Springer Nature, 2023, pp. 291–311, doi:<a href="https://doi.org/10.1007/978-3-031-44267-4_15">10.1007/978-3-031-44267-4_15</a>.
  short: T.A. Henzinger, K. Kueffner, K. Mallik, in:, 23rd International Conference
    on Runtime Verification, Springer Nature, 2023, pp. 291–311.
conference:
  end_date: 2023-10-06
  location: Thessaloniki, Greece
  name: 'RV: Conference on Runtime Verification'
  start_date: 2023-10-03
corr_author: '1'
date_created: 2023-10-29T23:01:15Z
date_published: 2023-10-01T00:00:00Z
date_updated: 2025-04-14T07:55:55Z
day: '01'
department:
- _id: ToHe
doi: 10.1007/978-3-031-44267-4_15
ec_funded: 1
external_id:
  arxiv:
  - '2308.00341'
intvolume: '     14245'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2308.00341
month: '10'
oa: 1
oa_version: Preprint
page: 291-311
project:
- _id: 62781420-2b32-11ec-9570-8d9b63373d4d
  call_identifier: H2020
  grant_number: '101020093'
  name: Vigilant Algorithmic Monitoring of Software
publication: 23rd International Conference on Runtime Verification
publication_identifier:
  eissn:
  - 1611-3349
  isbn:
  - '9783031442667'
  issn:
  - 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Monitoring algorithmic fairness under partial observations
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 14245
year: '2023'
...
---
_id: '14455'
acknowledgement: The author(s) declare that financial support was received for the
  research, authorship, and/or publication of this article. This work has been partially
  supported by Italian Ministry of Health Grant RC2023 (and the 5 × 1,000 voluntary
  contributions). The authors thank the children and their families with whom they
  work daily.
article_number: '1287879'
article_processing_charge: Yes
article_type: letter_note
author:
- first_name: Antonio
  full_name: Narzisi, Antonio
  last_name: Narzisi
- first_name: Alycia
  full_name: Halladay, Alycia
  last_name: Halladay
- first_name: Gabriele
  full_name: Masi, Gabriele
  last_name: Masi
- first_name: Gaia
  full_name: Novarino, Gaia
  id: 3E57A680-F248-11E8-B48F-1D18A9856A87
  last_name: Novarino
  orcid: 0000-0002-7673-7178
- first_name: Catherine
  full_name: Lord, Catherine
  last_name: Lord
citation:
  ama: 'Narzisi A, Halladay A, Masi G, Novarino G, Lord C. Tempering expectations:
    Considerations on the current state of stem cells therapy for autism treatment.
    <i>Frontiers in Psychiatry</i>. 2023;14. doi:<a href="https://doi.org/10.3389/fpsyt.2023.1287879">10.3389/fpsyt.2023.1287879</a>'
  apa: 'Narzisi, A., Halladay, A., Masi, G., Novarino, G., &#38; Lord, C. (2023).
    Tempering expectations: Considerations on the current state of stem cells therapy
    for autism treatment. <i>Frontiers in Psychiatry</i>. Frontiers. <a href="https://doi.org/10.3389/fpsyt.2023.1287879">https://doi.org/10.3389/fpsyt.2023.1287879</a>'
  chicago: 'Narzisi, Antonio, Alycia Halladay, Gabriele Masi, Gaia Novarino, and Catherine
    Lord. “Tempering Expectations: Considerations on the Current State of Stem Cells
    Therapy for Autism Treatment.” <i>Frontiers in Psychiatry</i>. Frontiers, 2023.
    <a href="https://doi.org/10.3389/fpsyt.2023.1287879">https://doi.org/10.3389/fpsyt.2023.1287879</a>.'
  ieee: 'A. Narzisi, A. Halladay, G. Masi, G. Novarino, and C. Lord, “Tempering expectations:
    Considerations on the current state of stem cells therapy for autism treatment,”
    <i>Frontiers in Psychiatry</i>, vol. 14. Frontiers, 2023.'
  ista: 'Narzisi A, Halladay A, Masi G, Novarino G, Lord C. 2023. Tempering expectations:
    Considerations on the current state of stem cells therapy for autism treatment.
    Frontiers in Psychiatry. 14, 1287879.'
  mla: 'Narzisi, Antonio, et al. “Tempering Expectations: Considerations on the Current
    State of Stem Cells Therapy for Autism Treatment.” <i>Frontiers in Psychiatry</i>,
    vol. 14, 1287879, Frontiers, 2023, doi:<a href="https://doi.org/10.3389/fpsyt.2023.1287879">10.3389/fpsyt.2023.1287879</a>.'
  short: A. Narzisi, A. Halladay, G. Masi, G. Novarino, C. Lord, Frontiers in Psychiatry
    14 (2023).
date_created: 2023-10-29T23:01:16Z
date_published: 2023-10-03T00:00:00Z
date_updated: 2023-12-13T13:06:07Z
day: '03'
ddc:
- '570'
department:
- _id: GaNo
doi: 10.3389/fpsyt.2023.1287879
external_id:
  isi:
  - '001084841700001'
  pmid:
  - '37854442'
file:
- access_level: open_access
  checksum: 0a76373e9a4c0fc199f80380de257e86
  content_type: application/pdf
  creator: dernst
  date_created: 2023-10-30T12:48:40Z
  date_updated: 2023-10-30T12:48:40Z
  file_id: '14468'
  file_name: 2023_FrontiersPsychiatry_Narzisi.pdf
  file_size: 147878
  relation: main_file
  success: 1
file_date_updated: 2023-10-30T12:48:40Z
has_accepted_license: '1'
intvolume: '        14'
isi: 1
language:
- iso: eng
month: '10'
oa: 1
oa_version: Published Version
pmid: 1
publication: Frontiers in Psychiatry
publication_identifier:
  eissn:
  - 1664-0640
publication_status: published
publisher: Frontiers
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Tempering expectations: Considerations on the current state of stem cells
  therapy for autism treatment'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 14
year: '2023'
...
---
_id: '14456'
abstract:
- lang: eng
  text: In this paper, we present novel algorithms that efficiently compute a shortest
    reconfiguration sequence between two given dominating sets in trees and interval
    graphs under the TOKEN SLIDING model. In this problem, a graph is provided along
    with its two dominating sets, which can be imagined as tokens placed on vertices.
    The objective is to find a shortest sequence of dominating sets that transforms
    one set into the other, with each set in the sequence resulting from sliding a
    single token in the previous set. While identifying any sequence has been well
    studied, our work presents the first polynomial algorithms for this optimization
    variant in the context of dominating sets.
alternative_title:
- LNCS
article_processing_charge: No
arxiv: 1
author:
- first_name: Jan Matyáš
  full_name: Křišťan, Jan Matyáš
  last_name: Křišťan
- first_name: Jakub
  full_name: Svoboda, Jakub
  id: 130759D2-D7DD-11E9-87D2-DE0DE6697425
  last_name: Svoboda
  orcid: 0000-0002-1419-3267
citation:
  ama: 'Křišťan JM, Svoboda J. Shortest dominating set reconfiguration under token
    sliding. In: <i>24th International Symposium on Fundamentals of Computation Theory</i>.
    Vol 14292. Springer Nature; 2023:333-347. doi:<a href="https://doi.org/10.1007/978-3-031-43587-4_24">10.1007/978-3-031-43587-4_24</a>'
  apa: 'Křišťan, J. M., &#38; Svoboda, J. (2023). Shortest dominating set reconfiguration
    under token sliding. In <i>24th International Symposium on Fundamentals of Computation
    Theory</i> (Vol. 14292, pp. 333–347). Trier, Germany: Springer Nature. <a href="https://doi.org/10.1007/978-3-031-43587-4_24">https://doi.org/10.1007/978-3-031-43587-4_24</a>'
  chicago: Křišťan, Jan Matyáš, and Jakub Svoboda. “Shortest Dominating Set Reconfiguration
    under Token Sliding.” In <i>24th International Symposium on Fundamentals of Computation
    Theory</i>, 14292:333–47. Springer Nature, 2023. <a href="https://doi.org/10.1007/978-3-031-43587-4_24">https://doi.org/10.1007/978-3-031-43587-4_24</a>.
  ieee: J. M. Křišťan and J. Svoboda, “Shortest dominating set reconfiguration under
    token sliding,” in <i>24th International Symposium on Fundamentals of Computation
    Theory</i>, Trier, Germany, 2023, vol. 14292, pp. 333–347.
  ista: 'Křišťan JM, Svoboda J. 2023. Shortest dominating set reconfiguration under
    token sliding. 24th International Symposium on Fundamentals of Computation Theory.
    FCT: Fundamentals of Computation Theory, LNCS, vol. 14292, 333–347.'
  mla: Křišťan, Jan Matyáš, and Jakub Svoboda. “Shortest Dominating Set Reconfiguration
    under Token Sliding.” <i>24th International Symposium on Fundamentals of Computation
    Theory</i>, vol. 14292, Springer Nature, 2023, pp. 333–47, doi:<a href="https://doi.org/10.1007/978-3-031-43587-4_24">10.1007/978-3-031-43587-4_24</a>.
  short: J.M. Křišťan, J. Svoboda, in:, 24th International Symposium on Fundamentals
    of Computation Theory, Springer Nature, 2023, pp. 333–347.
conference:
  end_date: 2023-09-21
  location: Trier, Germany
  name: 'FCT: Fundamentals of Computation Theory'
  start_date: 2023-09-18
date_created: 2023-10-29T23:01:16Z
date_published: 2023-09-21T00:00:00Z
date_updated: 2025-09-09T13:07:40Z
day: '21'
department:
- _id: KrCh
doi: 10.1007/978-3-031-43587-4_24
external_id:
  arxiv:
  - '2307.10847'
  isi:
  - '001162288800024'
intvolume: '     14292'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2307.10847
month: '09'
oa: 1
oa_version: Preprint
page: 333-347
publication: 24th International Symposium on Fundamentals of Computation Theory
publication_identifier:
  eissn:
  - 1611-3349
  isbn:
  - '9783031435867'
  issn:
  - 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
  link:
  - relation: erratum
    url: https://doi.org/10.1007/978-3-031-43587-4_31
scopus_import: '1'
status: public
title: Shortest dominating set reconfiguration under token sliding
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 14292
year: '2023'
...
---
_id: '14457'
abstract:
- lang: eng
  text: "Threshold secret sharing allows a dealer to split a secret s into n shares,
    such that any t shares allow for reconstructing s, but no t-1 shares reveal any
    information about s. Leakage-resilient secret sharing requires that the secret
    remains hidden, even when an adversary additionally obtains a limited amount of
    leakage from every share. Benhamouda et al. (CRYPTO’18) proved that Shamir’s secret
    sharing scheme is one bit leakage-resilient for reconstruction threshold t≥0.85n
    and conjectured that the same holds for t = c.n for any constant 0≤c≤1.  Nielsen
    and Simkin (EUROCRYPT’20) showed that this is the best one can hope for by proving
    that Shamir’s scheme is not secure against one-bit leakage when t0c.n/log(n).\r\nIn
    this work, we strengthen the lower bound of Nielsen and Simkin. We consider noisy
    leakage-resilience, where a random subset of leakages is replaced by uniformly
    random noise. We prove a lower bound for Shamir’s secret sharing, similar to that
    of Nielsen and Simkin, which holds even when a constant fraction of leakages is
    replaced by random noise. To this end, we first prove a lower bound on the share
    size of any noisy-leakage-resilient sharing scheme. We then use this lower bound
    to show that there exist universal constants c1, c2,  such that for sufficiently
    large n it holds that Shamir’s secret sharing scheme is not noisy-leakage-resilient
    for t≤c1.n/log(n), even when a c2 fraction of leakages are replaced by random
    noise.\r\n\r\n\r\n\r\n"
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Charlotte
  full_name: Hoffmann, Charlotte
  id: 0f78d746-dc7d-11ea-9b2f-83f92091afe7
  last_name: Hoffmann
  orcid: 0000-0003-2027-5549
- first_name: Mark
  full_name: Simkin, Mark
  last_name: Simkin
citation:
  ama: 'Hoffmann C, Simkin M. Stronger lower bounds for leakage-resilient secret sharing.
    In: <i>8th International Conference on Cryptology and Information Security in
    Latin America</i>. Vol 14168. Springer Nature; 2023:215-228. doi:<a href="https://doi.org/10.1007/978-3-031-44469-2_11">10.1007/978-3-031-44469-2_11</a>'
  apa: 'Hoffmann, C., &#38; Simkin, M. (2023). Stronger lower bounds for leakage-resilient
    secret sharing. In <i>8th International Conference on Cryptology and Information
    Security in Latin America</i> (Vol. 14168, pp. 215–228). Quito, Ecuador: Springer
    Nature. <a href="https://doi.org/10.1007/978-3-031-44469-2_11">https://doi.org/10.1007/978-3-031-44469-2_11</a>'
  chicago: Hoffmann, Charlotte, and Mark Simkin. “Stronger Lower Bounds for Leakage-Resilient
    Secret Sharing.” In <i>8th International Conference on Cryptology and Information
    Security in Latin America</i>, 14168:215–28. Springer Nature, 2023. <a href="https://doi.org/10.1007/978-3-031-44469-2_11">https://doi.org/10.1007/978-3-031-44469-2_11</a>.
  ieee: C. Hoffmann and M. Simkin, “Stronger lower bounds for leakage-resilient secret
    sharing,” in <i>8th International Conference on Cryptology and Information Security
    in Latin America</i>, Quito, Ecuador, 2023, vol. 14168, pp. 215–228.
  ista: 'Hoffmann C, Simkin M. 2023. Stronger lower bounds for leakage-resilient secret
    sharing. 8th International Conference on Cryptology and Information Security in
    Latin America. LATINCRYPT: Cryptology and Information Security in Latin America,
    LNCS, vol. 14168, 215–228.'
  mla: Hoffmann, Charlotte, and Mark Simkin. “Stronger Lower Bounds for Leakage-Resilient
    Secret Sharing.” <i>8th International Conference on Cryptology and Information
    Security in Latin America</i>, vol. 14168, Springer Nature, 2023, pp. 215–28,
    doi:<a href="https://doi.org/10.1007/978-3-031-44469-2_11">10.1007/978-3-031-44469-2_11</a>.
  short: C. Hoffmann, M. Simkin, in:, 8th International Conference on Cryptology and
    Information Security in Latin America, Springer Nature, 2023, pp. 215–228.
conference:
  end_date: 2023-10-06
  location: Quito, Ecuador
  name: 'LATINCRYPT: Cryptology and Information Security in Latin America'
  start_date: 2023-10-03
corr_author: '1'
date_created: 2023-10-29T23:01:16Z
date_published: 2023-10-01T00:00:00Z
date_updated: 2025-09-09T13:09:21Z
day: '01'
department:
- _id: KrPi
doi: 10.1007/978-3-031-44469-2_11
external_id:
  isi:
  - '001157041900011'
intvolume: '     14168'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://eprint.iacr.org/2023/1017
month: '10'
oa: 1
oa_version: Preprint
page: 215-228
publication: 8th International Conference on Cryptology and Information Security in
  Latin America
publication_identifier:
  eissn:
  - 1611-3349
  isbn:
  - '9783031444685'
  issn:
  - 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Stronger lower bounds for leakage-resilient secret sharing
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 14168
year: '2023'
...
---
_id: '14460'
abstract:
- lang: eng
  text: We provide an efficient implementation of the backpropagation algorithm, specialized
    to the case where the weights of the neural network being trained are sparse.
    Our algorithm is general, as it applies to arbitrary (unstructured) sparsity and
    common layer types (e.g., convolutional or linear). We provide a fast vectorized
    implementation on commodity CPUs, and show that it can yield speedups in end-to-end
    runtime experiments, both in transfer learning using already-sparsified networks,
    and in training sparse networks from scratch. Thus, our results provide the first
    support for sparse training on commodity hardware.
acknowledgement: 'We would like to thank Elias Frantar for his valuable assistance
  and support at the outset of this project, and the anonymous ICML and SNN reviewers
  for very constructive feedback. EI was supported in part by the FWF DK VGSCO, grant
  agreement number W1260-N35. DA acknowledges generous ERC support, via Starting Grant
  805223 ScaleML. '
alternative_title:
- PMLR
article_processing_charge: No
arxiv: 1
author:
- first_name: Mahdi
  full_name: Nikdan, Mahdi
  id: 66374281-f394-11eb-9cf6-869147deecc0
  last_name: Nikdan
- first_name: Tommaso
  full_name: Pegolotti, Tommaso
  last_name: Pegolotti
- first_name: Eugenia B
  full_name: Iofinova, Eugenia B
  id: f9a17499-f6e0-11ea-865d-fdf9a3f77117
  last_name: Iofinova
  orcid: 0000-0002-7778-3221
- first_name: Eldar
  full_name: Kurtic, Eldar
  id: 47beb3a5-07b5-11eb-9b87-b108ec578218
  last_name: Kurtic
- first_name: Dan-Adrian
  full_name: Alistarh, Dan-Adrian
  id: 4A899BFC-F248-11E8-B48F-1D18A9856A87
  last_name: Alistarh
  orcid: 0000-0003-3650-940X
citation:
  ama: 'Nikdan M, Pegolotti T, Iofinova EB, Kurtic E, Alistarh D-A. SparseProp: Efficient
    sparse backpropagation for faster training of neural networks at the edge. In:
    <i>Proceedings of the 40th International Conference on Machine Learning</i>. Vol
    202. ML Research Press; 2023:26215-26227.'
  apa: 'Nikdan, M., Pegolotti, T., Iofinova, E. B., Kurtic, E., &#38; Alistarh, D.-A.
    (2023). SparseProp: Efficient sparse backpropagation for faster training of neural
    networks at the edge. In <i>Proceedings of the 40th International Conference on
    Machine Learning</i> (Vol. 202, pp. 26215–26227). Honolulu, Hawaii, HI, United
    States: ML Research Press.'
  chicago: 'Nikdan, Mahdi, Tommaso Pegolotti, Eugenia B Iofinova, Eldar Kurtic, and
    Dan-Adrian Alistarh. “SparseProp: Efficient Sparse Backpropagation for Faster
    Training of Neural Networks at the Edge.” In <i>Proceedings of the 40th International
    Conference on Machine Learning</i>, 202:26215–27. ML Research Press, 2023.'
  ieee: 'M. Nikdan, T. Pegolotti, E. B. Iofinova, E. Kurtic, and D.-A. Alistarh, “SparseProp:
    Efficient sparse backpropagation for faster training of neural networks at the
    edge,” in <i>Proceedings of the 40th International Conference on Machine Learning</i>,
    Honolulu, Hawaii, HI, United States, 2023, vol. 202, pp. 26215–26227.'
  ista: 'Nikdan M, Pegolotti T, Iofinova EB, Kurtic E, Alistarh D-A. 2023. SparseProp:
    Efficient sparse backpropagation for faster training of neural networks at the
    edge. Proceedings of the 40th International Conference on Machine Learning. ICML:
    International Conference on Machine Learning, PMLR, vol. 202, 26215–26227.'
  mla: 'Nikdan, Mahdi, et al. “SparseProp: Efficient Sparse Backpropagation for Faster
    Training of Neural Networks at the Edge.” <i>Proceedings of the 40th International
    Conference on Machine Learning</i>, vol. 202, ML Research Press, 2023, pp. 26215–27.'
  short: M. Nikdan, T. Pegolotti, E.B. Iofinova, E. Kurtic, D.-A. Alistarh, in:, Proceedings
    of the 40th International Conference on Machine Learning, ML Research Press, 2023,
    pp. 26215–26227.
conference:
  end_date: 2023-07-29
  location: Honolulu, Hawaii, HI, United States
  name: 'ICML: International Conference on Machine Learning'
  start_date: 2023-07-23
corr_author: '1'
date_created: 2023-10-29T23:01:17Z
date_published: 2023-07-30T00:00:00Z
date_updated: 2025-04-14T07:49:12Z
day: '30'
department:
- _id: DaAl
ec_funded: 1
external_id:
  arxiv:
  - '2302.04852'
intvolume: '       202'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2302.04852
month: '07'
oa: 1
oa_version: Preprint
page: 26215-26227
project:
- _id: 268A44D6-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '805223'
  name: Elastic Coordination for Scalable Machine Learning
publication: Proceedings of the 40th International Conference on Machine Learning
publication_identifier:
  eissn:
  - 2640-3498
publication_status: published
publisher: ML Research Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'SparseProp: Efficient sparse backpropagation for faster training of neural
  networks at the edge'
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 202
year: '2023'
...
---
_id: '14462'
abstract:
- lang: eng
  text: "We study fine-grained error bounds for differentially private algorithms
    for counting under continual observation. Our main insight is that the matrix
    mechanism when using lower-triangular matrices can be used in the continual observation
    model. More specifically, we give an explicit factorization for the counting matrix
    Mcount and upper bound the error explicitly. We also give a fine-grained analysis,
    specifying the exact constant in the upper bound. Our analysis is based on upper
    and lower bounds of the completely bounded norm (cb-norm) of Mcount\r\n. Along
    the way, we improve the best-known bound of 28 years by Mathias (SIAM Journal
    on Matrix Analysis and Applications, 1993) on the cb-norm of Mcount for a large
    range of the dimension of Mcount. Furthermore, we are the first to give concrete
    error bounds for various problems under continual observation such as binary counting,
    maintaining a histogram, releasing an approximately cut-preserving synthetic graph,
    many graph-based statistics, and substring and episode counting. Finally, we note
    that our result can be used to get a fine-grained error bound for non-interactive
    local learning and the first lower bounds on the additive error for (ϵ,δ)-differentially-private
    counting under continual observation. Subsequent to this work, Henzinger et al.
    (SODA, 2023) showed that our factorization also achieves fine-grained mean-squared
    error."
acknowledgement: "This project has received funding from the European Research Council
  (ERC) under the European Union’s Horizon 2020 research and innovation programme
  (Grant agreement No.\r\n101019564 “The Design of Modern Fully Dynamic Data Structures
  (MoDynStruct)” and from the Austrian Science Fund (FWF) project Z 422-N, and project
  “Fast Algorithms for a Reactive Network Layer (ReactNet)”, P 33775-N, with additional
  funding from the netidee SCIENCE Stiftung, 2020–2024. 2020–2024. JU’s research was
  funded by Decanal Research Grant. A part of this work was done when JU was visiting
  Indian Statistical Institute, Delhi. The authors would like to thank Rajat Bhatia,
  Aleksandar Nikolov, Shanta Laisharam, Vern Paulsen, Ryan Rogers, Abhradeep Thakurta,
  and Sarvagya Upadhyay for useful discussions."
alternative_title:
- PMLR
article_processing_charge: No
arxiv: 1
author:
- first_name: Hendrik
  full_name: Fichtenberger, Hendrik
  last_name: Fichtenberger
- first_name: Monika H
  full_name: Henzinger, Monika H
  id: 540c9bbd-f2de-11ec-812d-d04a5be85630
  last_name: Henzinger
  orcid: 0000-0002-5008-6530
- first_name: Jalaj
  full_name: Upadhyay, Jalaj
  last_name: Upadhyay
citation:
  ama: 'Fichtenberger H, Henzinger M, Upadhyay J. Constant matters: Fine-grained error
    bound on differentially private continual observation. In: <i>Proceedings of the
    40th International Conference on Machine Learning</i>. Vol 202. ML Research Press;
    2023:10072-10092.'
  apa: 'Fichtenberger, H., Henzinger, M., &#38; Upadhyay, J. (2023). Constant matters:
    Fine-grained error bound on differentially private continual observation. In <i>Proceedings
    of the 40th International Conference on Machine Learning</i> (Vol. 202, pp. 10072–10092).
    Honolulu, Hawaii, HI, United States: ML Research Press.'
  chicago: 'Fichtenberger, Hendrik, Monika Henzinger, and Jalaj Upadhyay. “Constant
    Matters: Fine-Grained Error Bound on Differentially Private Continual Observation.”
    In <i>Proceedings of the 40th International Conference on Machine Learning</i>,
    202:10072–92. ML Research Press, 2023.'
  ieee: 'H. Fichtenberger, M. Henzinger, and J. Upadhyay, “Constant matters: Fine-grained
    error bound on differentially private continual observation,” in <i>Proceedings
    of the 40th International Conference on Machine Learning</i>, Honolulu, Hawaii,
    HI, United States, 2023, vol. 202, pp. 10072–10092.'
  ista: 'Fichtenberger H, Henzinger M, Upadhyay J. 2023. Constant matters: Fine-grained
    error bound on differentially private continual observation. Proceedings of the
    40th International Conference on Machine Learning. ICML: International Conference
    on Machine Learning, PMLR, vol. 202, 10072–10092.'
  mla: 'Fichtenberger, Hendrik, et al. “Constant Matters: Fine-Grained Error Bound
    on Differentially Private Continual Observation.” <i>Proceedings of the 40th International
    Conference on Machine Learning</i>, vol. 202, ML Research Press, 2023, pp. 10072–92.'
  short: H. Fichtenberger, M. Henzinger, J. Upadhyay, in:, Proceedings of the 40th
    International Conference on Machine Learning, ML Research Press, 2023, pp. 10072–10092.
conference:
  end_date: 2023-07-29
  location: Honolulu, Hawaii, HI, United States
  name: 'ICML: International Conference on Machine Learning'
  start_date: 2023-07-23
corr_author: '1'
date_created: 2023-10-29T23:01:17Z
date_published: 2023-07-30T00:00:00Z
date_updated: 2025-05-19T10:59:58Z
day: '30'
department:
- _id: MoHe
ec_funded: 1
external_id:
  arxiv:
  - '2202.11205'
intvolume: '       202'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://proceedings.mlr.press/v202/fichtenberger23a/fichtenberger23a.pdf
month: '07'
oa: 1
oa_version: Published Version
page: 10072-10092
project:
- _id: bd9ca328-d553-11ed-ba76-dc4f890cfe62
  call_identifier: H2020
  grant_number: '101019564'
  name: The design and evaluation of modern fully dynamic data structures
- _id: 34def286-11ca-11ed-8bc3-da5948e1613c
  grant_number: Z00422
  name: Efficient algorithms
- _id: bd9e3a2e-d553-11ed-ba76-8aa684ce17fe
  grant_number: P33775
  name: Fast Algorithms for a Reactive Network Layer
publication: Proceedings of the 40th International Conference on Machine Learning
publication_identifier:
  eissn:
  - 2640-3498
publication_status: published
publisher: ML Research Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Constant matters: Fine-grained error bound on differentially private continual
  observation'
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 202
year: '2023'
...
---
_id: '14464'
abstract:
- lang: eng
  text: 'Given a triangle Δ, we study the problem of determining the smallest enclosing
    and largest embedded isosceles triangles of Δ with respect to area and perimeter.
    This problem was initially posed by Nandakumar [17, 22] and was first studied
    by Kiss, Pach, and Somlai [13], who showed that if Δ′ is the smallest area isosceles
    triangle containing Δ, then Δ′ and Δ share a side and an angle. In the present
    paper, we prove that for any triangle Δ, every maximum area isosceles triangle
    embedded in Δ and every maximum perimeter isosceles triangle embedded in Δ shares
    a side and an angle with Δ. Somewhat surprisingly, the case of minimum perimeter
    enclosing triangles is different: there are infinite families of triangles Δ whose
    minimum perimeter isosceles containers do not share a side and an angle with Δ.'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Áron
  full_name: Ambrus, Áron
  last_name: Ambrus
- first_name: Mónika
  full_name: Csikós, Mónika
  last_name: Csikós
- first_name: Gergely
  full_name: Kiss, Gergely
  last_name: Kiss
- first_name: János
  full_name: Pach, János
  id: E62E3130-B088-11EA-B919-BF823C25FEA4
  last_name: Pach
- first_name: Gábor
  full_name: Somlai, Gábor
  last_name: Somlai
citation:
  ama: Ambrus Á, Csikós M, Kiss G, Pach J, Somlai G. Optimal embedded and enclosing
    isosceles triangles. <i>International Journal of Foundations of Computer Science</i>.
    2023;34(7):737-760. doi:<a href="https://doi.org/10.1142/S012905412342008X">10.1142/S012905412342008X</a>
  apa: Ambrus, Á., Csikós, M., Kiss, G., Pach, J., &#38; Somlai, G. (2023). Optimal
    embedded and enclosing isosceles triangles. <i>International Journal of Foundations
    of Computer Science</i>. World Scientific Publishing. <a href="https://doi.org/10.1142/S012905412342008X">https://doi.org/10.1142/S012905412342008X</a>
  chicago: Ambrus, Áron, Mónika Csikós, Gergely Kiss, János Pach, and Gábor Somlai.
    “Optimal Embedded and Enclosing Isosceles Triangles.” <i>International Journal
    of Foundations of Computer Science</i>. World Scientific Publishing, 2023. <a
    href="https://doi.org/10.1142/S012905412342008X">https://doi.org/10.1142/S012905412342008X</a>.
  ieee: Á. Ambrus, M. Csikós, G. Kiss, J. Pach, and G. Somlai, “Optimal embedded and
    enclosing isosceles triangles,” <i>International Journal of Foundations of Computer
    Science</i>, vol. 34, no. 7. World Scientific Publishing, pp. 737–760, 2023.
  ista: Ambrus Á, Csikós M, Kiss G, Pach J, Somlai G. 2023. Optimal embedded and enclosing
    isosceles triangles. International Journal of Foundations of Computer Science.
    34(7), 737–760.
  mla: Ambrus, Áron, et al. “Optimal Embedded and Enclosing Isosceles Triangles.”
    <i>International Journal of Foundations of Computer Science</i>, vol. 34, no.
    7, World Scientific Publishing, 2023, pp. 737–60, doi:<a href="https://doi.org/10.1142/S012905412342008X">10.1142/S012905412342008X</a>.
  short: Á. Ambrus, M. Csikós, G. Kiss, J. Pach, G. Somlai, International Journal
    of Foundations of Computer Science 34 (2023) 737–760.
date_created: 2023-10-29T23:01:18Z
date_published: 2023-10-05T00:00:00Z
date_updated: 2023-12-13T13:04:55Z
day: '05'
department:
- _id: HeEd
doi: 10.1142/S012905412342008X
external_id:
  arxiv:
  - '2205.11637'
  isi:
  - '001080874400001'
intvolume: '        34'
isi: 1
issue: '7'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2205.11637
month: '10'
oa: 1
oa_version: Preprint
page: 737-760
publication: International Journal of Foundations of Computer Science
publication_identifier:
  eissn:
  - 1793-6373
  issn:
  - 0129-0541
publication_status: published
publisher: World Scientific Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: Optimal embedded and enclosing isosceles triangles
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 34
year: '2023'
...
