---
_id: '6184'
abstract:
- lang: eng
text: We prove edge universality for a general class of correlated real symmetric
or complex Hermitian Wigner matrices with arbitrary expectation. Our theorem also
applies to internal edges of the self-consistent density of states. In particular,
we establish a strong form of band rigidity which excludes mismatches between
location and label of eigenvalues close to internal edges in these general models.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Johannes
full_name: Alt, Johannes
id: 36D3D8B6-F248-11E8-B48F-1D18A9856A87
last_name: Alt
- first_name: László
full_name: Erdös, László
id: 4DBD5372-F248-11E8-B48F-1D18A9856A87
last_name: Erdös
orcid: 0000-0001-5366-9603
- first_name: Torben H
full_name: Krüger, Torben H
id: 3020C786-F248-11E8-B48F-1D18A9856A87
last_name: Krüger
orcid: 0000-0002-4821-3297
- first_name: Dominik J
full_name: Schröder, Dominik J
id: 408ED176-F248-11E8-B48F-1D18A9856A87
last_name: Schröder
orcid: 0000-0002-2904-1856
citation:
ama: 'Alt J, Erdös L, Krüger TH, Schröder DJ. Correlated random matrices: Band rigidity
and edge universality. Annals of Probability. 2020;48(2):963-1001. doi:10.1214/19-AOP1379'
apa: 'Alt, J., Erdös, L., Krüger, T. H., & Schröder, D. J. (2020). Correlated
random matrices: Band rigidity and edge universality. Annals of Probability.
Institute of Mathematical Statistics. https://doi.org/10.1214/19-AOP1379'
chicago: 'Alt, Johannes, László Erdös, Torben H Krüger, and Dominik J Schröder.
“Correlated Random Matrices: Band Rigidity and Edge Universality.” Annals of
Probability. Institute of Mathematical Statistics, 2020. https://doi.org/10.1214/19-AOP1379.'
ieee: 'J. Alt, L. Erdös, T. H. Krüger, and D. J. Schröder, “Correlated random matrices:
Band rigidity and edge universality,” Annals of Probability, vol. 48, no.
2. Institute of Mathematical Statistics, pp. 963–1001, 2020.'
ista: 'Alt J, Erdös L, Krüger TH, Schröder DJ. 2020. Correlated random matrices:
Band rigidity and edge universality. Annals of Probability. 48(2), 963–1001.'
mla: 'Alt, Johannes, et al. “Correlated Random Matrices: Band Rigidity and Edge
Universality.” Annals of Probability, vol. 48, no. 2, Institute of Mathematical
Statistics, 2020, pp. 963–1001, doi:10.1214/19-AOP1379.'
short: J. Alt, L. Erdös, T.H. Krüger, D.J. Schröder, Annals of Probability 48 (2020)
963–1001.
date_created: 2019-03-28T09:20:08Z
date_published: 2020-03-01T00:00:00Z
date_updated: 2026-04-08T14:11:36Z
day: '01'
department:
- _id: LaEr
doi: 10.1214/19-AOP1379
ec_funded: 1
external_id:
arxiv:
- '1804.07744'
isi:
- '000528269100013'
intvolume: ' 48'
isi: 1
issue: '2'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/1804.07744
month: '03'
oa: 1
oa_version: Preprint
page: 963-1001
project:
- _id: 258DCDE6-B435-11E9-9278-68D0E5697425
call_identifier: FP7
grant_number: '338804'
name: Random matrices, universality and disordered quantum systems
publication: Annals of Probability
publication_identifier:
issn:
- 0091-1798
publication_status: published
publisher: Institute of Mathematical Statistics
quality_controlled: '1'
related_material:
record:
- id: '6179'
relation: dissertation_contains
status: public
- id: '149'
relation: dissertation_contains
status: public
scopus_import: '1'
status: public
title: 'Correlated random matrices: Band rigidity and edge universality'
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 48
year: '2020'
...
---
_id: '8978'
abstract:
- lang: eng
text: "Mosaic analysis with double markers (MADM) technology enables concomitant
fluorescent cell labeling and induction of uniparental chromosome disomy (UPD)
with single-cell resolution. In UPD, imprinted genes are either overexpressed
2-fold or are not expressed. Here, the MADM platform is utilized to probe imprinting
phenotypes at the transcriptional level. This protocol highlights major steps
for the generation and isolation of projection neurons and astrocytes with MADM-induced
UPD from mouse cerebral cortex for downstream single-cell and low-input sample
RNA-sequencing experiments.\r\n\r\nFor complete details on the use and execution
of this protocol, please refer to Laukoter et al. (2020b)."
acknowledged_ssus:
- _id: Bio
- _id: PreCl
acknowledgement: This research was supported by the Scientific Service Units (SSU)
at IST Austria through resources provided by the Bioimaging (BIF) and Preclinical
Facilities (PCF). N.A received support from the FWF Firnberg-Programm (T 1031).
This work was also supported by IST Austria institutional funds; FWF SFB F78 to
S.H.; NÖ Forschung und Bildung n[f+b] life science call grant (C13-002) to S.H.;
the People Programme (Marie Curie Actions) of the European Union’s Seventh Framework
Programme (FP7/2007-2013) under REA grant agreement no. 618444 to S.H.; and the
European Research Council (ERC) under the European Union’s Horizon 2020 research
and innovation programme (grant agreement no. 725780 LinPro) to S.H.
article_number: '100215'
article_processing_charge: No
article_type: original
author:
- first_name: Susanne
full_name: Laukoter, Susanne
id: 2D6B7A9A-F248-11E8-B48F-1D18A9856A87
last_name: Laukoter
orcid: 0000-0002-7903-3010
- first_name: Nicole
full_name: Amberg, Nicole
id: 4CD6AAC6-F248-11E8-B48F-1D18A9856A87
last_name: Amberg
orcid: 0000-0002-3183-8207
- first_name: Florian
full_name: Pauler, Florian
id: 48EA0138-F248-11E8-B48F-1D18A9856A87
last_name: Pauler
orcid: 0000-0002-7462-0048
- first_name: Simon
full_name: Hippenmeyer, Simon
id: 37B36620-F248-11E8-B48F-1D18A9856A87
last_name: Hippenmeyer
orcid: 0000-0003-2279-1061
citation:
ama: Laukoter S, Amberg N, Pauler F, Hippenmeyer S. Generation and isolation of
single cells from mouse brain with mosaic analysis with double markers-induced
uniparental chromosome disomy. STAR Protocols. 2020;1(3). doi:10.1016/j.xpro.2020.100215
apa: Laukoter, S., Amberg, N., Pauler, F., & Hippenmeyer, S. (2020). Generation
and isolation of single cells from mouse brain with mosaic analysis with double
markers-induced uniparental chromosome disomy. STAR Protocols. Elsevier.
https://doi.org/10.1016/j.xpro.2020.100215
chicago: Laukoter, Susanne, Nicole Amberg, Florian Pauler, and Simon Hippenmeyer.
“Generation and Isolation of Single Cells from Mouse Brain with Mosaic Analysis
with Double Markers-Induced Uniparental Chromosome Disomy.” STAR Protocols.
Elsevier, 2020. https://doi.org/10.1016/j.xpro.2020.100215.
ieee: S. Laukoter, N. Amberg, F. Pauler, and S. Hippenmeyer, “Generation and isolation
of single cells from mouse brain with mosaic analysis with double markers-induced
uniparental chromosome disomy,” STAR Protocols, vol. 1, no. 3. Elsevier,
2020.
ista: Laukoter S, Amberg N, Pauler F, Hippenmeyer S. 2020. Generation and isolation
of single cells from mouse brain with mosaic analysis with double markers-induced
uniparental chromosome disomy. STAR Protocols. 1(3), 100215.
mla: Laukoter, Susanne, et al. “Generation and Isolation of Single Cells from Mouse
Brain with Mosaic Analysis with Double Markers-Induced Uniparental Chromosome
Disomy.” STAR Protocols, vol. 1, no. 3, 100215, Elsevier, 2020, doi:10.1016/j.xpro.2020.100215.
short: S. Laukoter, N. Amberg, F. Pauler, S. Hippenmeyer, STAR Protocols 1 (2020).
corr_author: '1'
date_created: 2020-12-30T10:17:07Z
date_published: 2020-12-18T00:00:00Z
date_updated: 2025-04-15T08:23:06Z
day: '18'
ddc:
- '570'
department:
- _id: SiHi
doi: 10.1016/j.xpro.2020.100215
ec_funded: 1
external_id:
pmid:
- '33377108'
file:
- access_level: open_access
checksum: f1e9a433e9cb0f41f7b6df6b76db1f6e
content_type: application/pdf
creator: dernst
date_created: 2021-01-07T15:57:27Z
date_updated: 2021-01-07T15:57:27Z
file_id: '8996'
file_name: 2020_STARProtocols_Laukoter.pdf
file_size: 4031449
relation: main_file
success: 1
file_date_updated: 2021-01-07T15:57:27Z
has_accepted_license: '1'
intvolume: ' 1'
issue: '3'
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 268F8446-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: T01031
name: Role of Eed in neural stem cell lineage progression
- _id: 059F6AB4-7A3F-11EA-A408-12923DDC885E
grant_number: F7805
name: Stem Cell Modulation in Neural Development and Regeneration/ P05-Molecular
Mechanisms of Neural Stem Cell Lineage Progression
- _id: 25D92700-B435-11E9-9278-68D0E5697425
grant_number: LS13-002
name: Mapping Cell-Type Specificity of the Genomic Imprintome in the Brain
- _id: 25D61E48-B435-11E9-9278-68D0E5697425
call_identifier: FP7
grant_number: '618444'
name: Molecular Mechanisms of Cerebral Cortex Development
- _id: 260018B0-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '725780'
name: Principles of Neural Stem Cell Lineage Progression in Cerebral Cortex Development
publication: STAR Protocols
publication_identifier:
issn:
- 2666-1667
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Generation and isolation of single cells from mouse brain with mosaic analysis
with double markers-induced uniparental chromosome disomy
tmp:
image: /images/cc_by_nc_nd.png
legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
(CC BY-NC-ND 4.0)
short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 1
year: '2020'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
PlanS_conform: '1'
_id: '21539'
abstract:
- lang: eng
text: The inability of conventional electronic architectures to efficiently solve
large combinatorial problems motivates the development of novel computational
hardware. There has been much effort toward developing application-specific hardware
across many different fields of engineering, such as integrated circuits, memristors,
and photonics. However, unleashing the potential of such architectures requires
the development of algorithms which optimally exploit their fundamental properties.
Here, we present the Photonic Recurrent Ising Sampler (PRIS), a heuristic method
tailored for parallel architectures allowing fast and efficient sampling from
distributions of arbitrary Ising problems. Since the PRIS relies on vector-to-fixed
matrix multiplications, we suggest the implementation of the PRIS in photonic
parallel networks, which realize these operations at an unprecedented speed. The
PRIS provides sample solutions to the ground state of Ising models, by converging
in probability to their associated Gibbs distribution. The PRIS also relies on
intrinsic dynamic noise and eigenvalue dropout to find ground states more efficiently.
Our work suggests speedups in heuristic methods via photonic implementations of
the PRIS.
article_number: '249'
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Charles
full_name: Roques-Carmes, Charles
id: e2e68fc9-6505-11ef-a541-eb4e72cc3e82
last_name: Roques-Carmes
- first_name: Yichen
full_name: Shen, Yichen
last_name: Shen
- first_name: Cristian
full_name: Zanoci, Cristian
last_name: Zanoci
- first_name: Mihika
full_name: Prabhu, Mihika
last_name: Prabhu
- first_name: Fadi
full_name: Atieh, Fadi
last_name: Atieh
- first_name: Li
full_name: Jing, Li
last_name: Jing
- first_name: Tena
full_name: Dubček, Tena
last_name: Dubček
- first_name: Chenkai
full_name: Mao, Chenkai
last_name: Mao
- first_name: Miles R.
full_name: Johnson, Miles R.
last_name: Johnson
- first_name: Vladimir
full_name: Čeperić, Vladimir
last_name: Čeperić
- first_name: John D.
full_name: Joannopoulos, John D.
last_name: Joannopoulos
- first_name: Dirk
full_name: Englund, Dirk
last_name: Englund
- first_name: Marin
full_name: Soljačić, Marin
last_name: Soljačić
citation:
ama: Roques-Carmes C, Shen Y, Zanoci C, et al. Heuristic recurrent algorithms for
photonic Ising machines. Nature Communications. 2020;11. doi:10.1038/s41467-019-14096-z
apa: Roques-Carmes, C., Shen, Y., Zanoci, C., Prabhu, M., Atieh, F., Jing, L., …
Soljačić, M. (2020). Heuristic recurrent algorithms for photonic Ising machines.
Nature Communications. Springer Nature. https://doi.org/10.1038/s41467-019-14096-z
chicago: Roques-Carmes, Charles, Yichen Shen, Cristian Zanoci, Mihika Prabhu, Fadi
Atieh, Li Jing, Tena Dubček, et al. “Heuristic Recurrent Algorithms for Photonic
Ising Machines.” Nature Communications. Springer Nature, 2020. https://doi.org/10.1038/s41467-019-14096-z.
ieee: C. Roques-Carmes et al., “Heuristic recurrent algorithms for photonic
Ising machines,” Nature Communications, vol. 11. Springer Nature, 2020.
ista: Roques-Carmes C, Shen Y, Zanoci C, Prabhu M, Atieh F, Jing L, Dubček T, Mao
C, Johnson MR, Čeperić V, Joannopoulos JD, Englund D, Soljačić M. 2020. Heuristic
recurrent algorithms for photonic Ising machines. Nature Communications. 11, 249.
mla: Roques-Carmes, Charles, et al. “Heuristic Recurrent Algorithms for Photonic
Ising Machines.” Nature Communications, vol. 11, 249, Springer Nature,
2020, doi:10.1038/s41467-019-14096-z.
short: C. Roques-Carmes, Y. Shen, C. Zanoci, M. Prabhu, F. Atieh, L. Jing, T. Dubček,
C. Mao, M.R. Johnson, V. Čeperić, J.D. Joannopoulos, D. Englund, M. Soljačić,
Nature Communications 11 (2020).
date_created: 2026-03-30T12:22:47Z
date_published: 2020-01-14T00:00:00Z
date_updated: 2026-04-15T06:15:50Z
day: '14'
ddc:
- '530'
doi: 10.1038/s41467-019-14096-z
extern: '1'
external_id:
arxiv:
- '1811.02705'
has_accepted_license: '1'
intvolume: ' 11'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1038/s41467-019-14096-z
month: '01'
oa: 1
oa_version: Published Version
publication: Nature Communications
publication_identifier:
eissn:
- 2041-1723
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Heuristic recurrent algorithms for photonic Ising machines
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 11
year: '2020'
...
---
_id: '8038'
abstract:
- lang: eng
text: Microelectromechanical systems and integrated photonics provide the basis
for many reliable and compact circuit elements in modern communication systems.
Electro-opto-mechanical devices are currently one of the leading approaches to
realize ultra-sensitive, low-loss transducers for an emerging quantum information
technology. Here we present an on-chip microwave frequency converter based on
a planar aluminum on silicon nitride platform that is compatible with slot-mode
coupled photonic crystal cavities. We show efficient frequency conversion between
two propagating microwave modes mediated by the radiation pressure interaction
with a metalized dielectric nanobeam oscillator. We achieve bidirectional coherent
conversion with a total device efficiency of up to ~60%, a dynamic range of 2
× 10^9 photons/s and an instantaneous bandwidth of up to 1.7 kHz. A high fidelity
quantum state transfer would be possible if the drive dependent output noise of
currently ~14 photons s^−1 Hz^−1 is further reduced. Such a silicon nitride based
transducer is in situ reconfigurable and could be used for on-chip classical and
quantum signal routing and filtering, both for microwave and hybrid microwave-optical
applications.
article_number: '034011'
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Johannes M
full_name: Fink, Johannes M
id: 4B591CBA-F248-11E8-B48F-1D18A9856A87
last_name: Fink
orcid: 0000-0001-8112-028X
- first_name: M.
full_name: Kalaee, M.
last_name: Kalaee
- first_name: R.
full_name: Norte, R.
last_name: Norte
- first_name: A.
full_name: Pitanti, A.
last_name: Pitanti
- first_name: O.
full_name: Painter, O.
last_name: Painter
citation:
ama: Fink JM, Kalaee M, Norte R, Pitanti A, Painter O. Efficient microwave frequency
conversion mediated by a photonics compatible silicon nitride nanobeam oscillator.
Quantum Science and Technology. 2020;5(3). doi:10.1088/2058-9565/ab8dce
apa: Fink, J. M., Kalaee, M., Norte, R., Pitanti, A., & Painter, O. (2020).
Efficient microwave frequency conversion mediated by a photonics compatible silicon
nitride nanobeam oscillator. Quantum Science and Technology. IOP Publishing.
https://doi.org/10.1088/2058-9565/ab8dce
chicago: Fink, Johannes M, M. Kalaee, R. Norte, A. Pitanti, and O. Painter. “Efficient
Microwave Frequency Conversion Mediated by a Photonics Compatible Silicon Nitride
Nanobeam Oscillator.” Quantum Science and Technology. IOP Publishing, 2020.
https://doi.org/10.1088/2058-9565/ab8dce.
ieee: J. M. Fink, M. Kalaee, R. Norte, A. Pitanti, and O. Painter, “Efficient microwave
frequency conversion mediated by a photonics compatible silicon nitride nanobeam
oscillator,” Quantum Science and Technology, vol. 5, no. 3. IOP Publishing,
2020.
ista: Fink JM, Kalaee M, Norte R, Pitanti A, Painter O. 2020. Efficient microwave
frequency conversion mediated by a photonics compatible silicon nitride nanobeam
oscillator. Quantum Science and Technology. 5(3), 034011.
mla: Fink, Johannes M., et al. “Efficient Microwave Frequency Conversion Mediated
by a Photonics Compatible Silicon Nitride Nanobeam Oscillator.” Quantum Science
and Technology, vol. 5, no. 3, 034011, IOP Publishing, 2020, doi:10.1088/2058-9565/ab8dce.
short: J.M. Fink, M. Kalaee, R. Norte, A. Pitanti, O. Painter, Quantum Science and
Technology 5 (2020).
corr_author: '1'
date_created: 2020-06-29T07:59:35Z
date_published: 2020-05-25T00:00:00Z
date_updated: 2026-04-15T06:42:07Z
day: '25'
ddc:
- '530'
department:
- _id: JoFi
doi: 10.1088/2058-9565/ab8dce
ec_funded: 1
external_id:
isi:
- '000539300800001'
file:
- access_level: open_access
checksum: 8f25f05053f511f892ae8fa93f341e61
content_type: application/pdf
creator: cziletti
date_created: 2020-06-30T10:29:10Z
date_updated: 2020-07-14T12:48:08Z
file_id: '8072'
file_name: 2020_QuantumSciTechnol_Fink.pdf
file_size: 2600967
relation: main_file
file_date_updated: 2020-07-14T12:48:08Z
has_accepted_license: '1'
intvolume: ' 5'
isi: 1
issue: '3'
language:
- iso: eng
month: '05'
oa: 1
oa_version: Published Version
project:
- _id: 26336814-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '758053'
name: A Fiber Optic Transceiver for Superconducting Qubits
- _id: 257EB838-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '732894'
name: Hybrid Optomechanical Technologies
- _id: 2622978C-B435-11E9-9278-68D0E5697425
name: Hybrid Semiconductor - Superconductor Quantum Devices
- _id: bdb108fd-d553-11ed-ba76-83dc74a9864f
grant_number: F07105
name: QUANTUM INFORMATION SYSTEMS BEYOND CLASSICAL CAPABILITIES / P5- Integration
of Superconducting Quantum Circuits
publication: Quantum Science and Technology
publication_identifier:
eissn:
- 2058-9565
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: Efficient microwave frequency conversion mediated by a photonics compatible
silicon nitride nanobeam oscillator
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 5
year: '2020'
...
---
_id: '8755'
abstract:
- lang: eng
text: 'The superconducting circuit community has recently discovered the promising
potential of superinductors. These circuit elements have a characteristic impedance
exceeding the resistance quantum RQ ≈ 6.45 kΩ which leads to a suppression of
ground state charge fluctuations. Applications include the realization of hardware
protected qubits for fault tolerant quantum computing, improved coupling to small
dipole moment objects and defining a new quantum metrology standard for the ampere.
In this work we refute the widespread notion that superinductors can only be implemented
based on kinetic inductance, i.e. using disordered superconductors or Josephson
junction arrays. We present modeling, fabrication and characterization of 104
planar aluminum coil resonators with a characteristic impedance up to 30.9 kΩ
at 5.6 GHz and a capacitance down to ≤ 1 fF, with lowloss and a power handling
reaching 108 intra-cavity photons. Geometric superinductors are free of uncontrolled
tunneling events and offer high reproducibility, linearity and the ability to
couple magnetically - properties that significantly broaden the scope of future
quantum circuits. '
acknowledged_ssus:
- _id: NanoFab
acknowledgement: "The authors acknowledge the support from I. Prieto and the IST Nanofabrication
Facility. This work was supported by IST Austria and a NOMIS foundation research
grant and the Austrian Science Fund (FWF) through BeyondC (F71). MP is the recipient
of a P¨ottinger scholarship at IST Austria. JMF acknowledges support from the European
Union’s Horizon 2020 research and innovation programs under grant agreement No 732894
(FET Proactive HOT), 862644 (FET Open QUARTET), and the European Research Council
under grant agreement\r\nnumber 758053 (ERC StG QUNNECT). "
article_number: '044055'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Matilda
full_name: Peruzzo, Matilda
id: 3F920B30-F248-11E8-B48F-1D18A9856A87
last_name: Peruzzo
orcid: 0000-0002-3415-4628
- first_name: Andrea
full_name: Trioni, Andrea
id: 42F71B44-F248-11E8-B48F-1D18A9856A87
last_name: Trioni
- first_name: Farid
full_name: Hassani, Farid
id: 2AED110C-F248-11E8-B48F-1D18A9856A87
last_name: Hassani
orcid: 0000-0001-6937-5773
- first_name: Martin
full_name: Zemlicka, Martin
id: 2DCF8DE6-F248-11E8-B48F-1D18A9856A87
last_name: Zemlicka
orcid: 0009-0005-0878-3032
- first_name: Johannes M
full_name: Fink, Johannes M
id: 4B591CBA-F248-11E8-B48F-1D18A9856A87
last_name: Fink
orcid: 0000-0001-8112-028X
citation:
ama: Peruzzo M, Trioni A, Hassani F, Zemlicka M, Fink JM. Surpassing the resistance
quantum with a geometric superinductor. Physical Review Applied. 2020;14(4).
doi:10.1103/PhysRevApplied.14.044055
apa: Peruzzo, M., Trioni, A., Hassani, F., Zemlicka, M., & Fink, J. M. (2020).
Surpassing the resistance quantum with a geometric superinductor. Physical
Review Applied. American Physical Society. https://doi.org/10.1103/PhysRevApplied.14.044055
chicago: Peruzzo, Matilda, Andrea Trioni, Farid Hassani, Martin Zemlicka, and Johannes
M Fink. “Surpassing the Resistance Quantum with a Geometric Superinductor.” Physical
Review Applied. American Physical Society, 2020. https://doi.org/10.1103/PhysRevApplied.14.044055.
ieee: M. Peruzzo, A. Trioni, F. Hassani, M. Zemlicka, and J. M. Fink, “Surpassing
the resistance quantum with a geometric superinductor,” Physical Review Applied,
vol. 14, no. 4. American Physical Society, 2020.
ista: Peruzzo M, Trioni A, Hassani F, Zemlicka M, Fink JM. 2020. Surpassing the
resistance quantum with a geometric superinductor. Physical Review Applied. 14(4),
044055.
mla: Peruzzo, Matilda, et al. “Surpassing the Resistance Quantum with a Geometric
Superinductor.” Physical Review Applied, vol. 14, no. 4, 044055, American
Physical Society, 2020, doi:10.1103/PhysRevApplied.14.044055.
short: M. Peruzzo, A. Trioni, F. Hassani, M. Zemlicka, J.M. Fink, Physical Review
Applied 14 (2020).
date_created: 2020-11-15T23:01:17Z
date_published: 2020-10-29T00:00:00Z
date_updated: 2026-04-15T06:43:02Z
day: '29'
ddc:
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ec_funded: 1
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call_identifier: H2020
grant_number: '732894'
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call_identifier: H2020
grant_number: '862644'
name: Quantum readout techniques and technologies
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title: Surpassing the resistance quantum with a geometric superinductor
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
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year: '2020'
...
---
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abstract:
- lang: eng
text: Quantum illumination uses entangled signal-idler photon pairs to boost the
detection efficiency of low-reflectivity objects in environments with bright thermal
noise. Its advantage is particularly evident at low signal powers, a promising
feature for applications such as noninvasive biomedical scanning or low-power
short-range radar. Here, we experimentally investigate the concept of quantum
illumination at microwave frequencies. We generate entangled fields to illuminate
a room-temperature object at a distance of 1 m in a free-space detection setup.
We implement a digital phase-conjugate receiver based on linear quadrature measurements
that outperforms a symmetric classical noise radar in the same conditions, despite
the entanglement-breaking signal path. Starting from experimental data, we also
simulate the case of perfect idler photon number detection, which results in a
quantum advantage compared with the relative classical benchmark. Our results
highlight the opportunities and challenges in the way toward a first room-temperature
application of microwave quantum circuits.
article_number: eabb0451
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full_name: Barzanjeh, Shabir
id: 2D25E1F6-F248-11E8-B48F-1D18A9856A87
last_name: Barzanjeh
orcid: 0000-0003-0415-1423
- first_name: S.
full_name: Pirandola, S.
last_name: Pirandola
- first_name: D
full_name: Vitali, D
last_name: Vitali
- first_name: Johannes M
full_name: Fink, Johannes M
id: 4B591CBA-F248-11E8-B48F-1D18A9856A87
last_name: Fink
orcid: 0000-0001-8112-028X
citation:
ama: Barzanjeh S, Pirandola S, Vitali D, Fink JM. Microwave quantum illumination
using a digital receiver. Science Advances. 2020;6(19). doi:10.1126/sciadv.abb0451
apa: Barzanjeh, S., Pirandola, S., Vitali, D., & Fink, J. M. (2020). Microwave
quantum illumination using a digital receiver. Science Advances. AAAS.
https://doi.org/10.1126/sciadv.abb0451
chicago: Barzanjeh, Shabir, S. Pirandola, D Vitali, and Johannes M Fink. “Microwave
Quantum Illumination Using a Digital Receiver.” Science Advances. AAAS,
2020. https://doi.org/10.1126/sciadv.abb0451.
ieee: S. Barzanjeh, S. Pirandola, D. Vitali, and J. M. Fink, “Microwave quantum
illumination using a digital receiver,” Science Advances, vol. 6, no. 19.
AAAS, 2020.
ista: Barzanjeh S, Pirandola S, Vitali D, Fink JM. 2020. Microwave quantum illumination
using a digital receiver. Science Advances. 6(19), eabb0451.
mla: Barzanjeh, Shabir, et al. “Microwave Quantum Illumination Using a Digital Receiver.”
Science Advances, vol. 6, no. 19, eabb0451, AAAS, 2020, doi:10.1126/sciadv.abb0451.
short: S. Barzanjeh, S. Pirandola, D. Vitali, J.M. Fink, Science Advances 6 (2020).
corr_author: '1'
date_created: 2020-05-31T22:00:49Z
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date_updated: 2026-04-15T06:42:37Z
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ec_funded: 1
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name: 'Microwave-to-Optical Quantum Link: Quantum Teleportation and Quantum Illumination
with cavity Optomechanics'
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call_identifier: H2020
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name: Hybrid Optomechanical Technologies
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text: Quantum illumination is a sensing technique that employs entangled signal-idler
beams to improve the detection efficiency of low-reflectivity objects in environments
with large thermal noise. The advantage over classical strategies is evident at
low signal brightness, a feature which could make the protocol an ideal prototype
for non-invasive scanning or low-power short-range radar. Here we experimentally
investigate the concept of quantum illumination at microwave frequencies, by generating
entangled fields using a Josephson parametric converter which are then amplified
to illuminate a room-temperature object at a distance of 1 meter. Starting from
experimental data, we simulate the case of perfect idler photon number detection,
which results in a quantum advantage compared to the relative classical benchmark.
Our results highlight the opportunities and challenges on the way towards a first
room-temperature application of microwave quantum circuits.
acknowledgement: "This work was supported by the Institute of Science and Technology
Austria (IST Austria), the European Research Council under grant agreement number
758053 (ERC StG QUNNECT) and the EU’s Horizon 2020 research and innovation programme
under grant agreement number 862644 (FET Open QUARTET). S.B. acknowledges support
from the Marie Skłodowska Curie\r\nfellowship number 707438 (MSC-IF SUPEREOM), DV
acknowledge support from EU’s Horizon 2020 research and innovation programme under
grant agreement number 732894 (FET Proactive HOT) and the Project QuaSeRT funded
by the QuantERA ERANET Cofund in Quantum Technologies, and J.M.F from the Austrian
Science Fund (FWF) through BeyondC (F71), a NOMIS foundation research grant, and
the EU’s Horizon 2020 research and\r\ninnovation programme under grant agreement
number 732894 (FET Proactive\r\nHOT)."
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last_name: Vitali
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full_name: Fink, Johannes M
id: 4B591CBA-F248-11E8-B48F-1D18A9856A87
last_name: Fink
orcid: 0000-0001-8112-028X
citation:
ama: 'Barzanjeh S, Pirandola S, Vitali D, Fink JM. Microwave quantum illumination
with a digital phase-conjugated receiver. In: IEEE National Radar Conference
- Proceedings. Vol 2020. IEEE; 2020. doi:10.1109/RadarConf2043947.2020.9266397'
apa: 'Barzanjeh, S., Pirandola, S., Vitali, D., & Fink, J. M. (2020). Microwave
quantum illumination with a digital phase-conjugated receiver. In IEEE National
Radar Conference - Proceedings (Vol. 2020). Florence, Italy: IEEE. https://doi.org/10.1109/RadarConf2043947.2020.9266397'
chicago: Barzanjeh, Shabir, Stefano Pirandola, David Vitali, and Johannes M Fink.
“Microwave Quantum Illumination with a Digital Phase-Conjugated Receiver.” In
IEEE National Radar Conference - Proceedings, Vol. 2020. IEEE, 2020. https://doi.org/10.1109/RadarConf2043947.2020.9266397.
ieee: S. Barzanjeh, S. Pirandola, D. Vitali, and J. M. Fink, “Microwave quantum
illumination with a digital phase-conjugated receiver,” in IEEE National Radar
Conference - Proceedings, Florence, Italy, 2020, vol. 2020, no. 9.
ista: 'Barzanjeh S, Pirandola S, Vitali D, Fink JM. 2020. Microwave quantum illumination
with a digital phase-conjugated receiver. IEEE National Radar Conference - Proceedings.
RadarConf: National Conference on Radar vol. 2020, 9266397.'
mla: Barzanjeh, Shabir, et al. “Microwave Quantum Illumination with a Digital Phase-Conjugated
Receiver.” IEEE National Radar Conference - Proceedings, vol. 2020, no.
9, 9266397, IEEE, 2020, doi:10.1109/RadarConf2043947.2020.9266397.
short: S. Barzanjeh, S. Pirandola, D. Vitali, J.M. Fink, in:, IEEE National Radar
Conference - Proceedings, IEEE, 2020.
conference:
end_date: 2020-09-25
location: Florence, Italy
name: 'RadarConf: National Conference on Radar'
start_date: 2020-09-21
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text: This dataset comprises all data shown in the figures of the submitted article
"Surpassing the resistance quantum with a geometric superinductor". Additional
raw data are available from the corresponding author on reasonable request.
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citation:
ama: Peruzzo M, Trioni A, Hassani F, Zemlicka M, Fink JM. Surpassing the resistance
quantum with a geometric superinductor. 2020. doi:10.5281/ZENODO.4052882
apa: Peruzzo, M., Trioni, A., Hassani, F., Zemlicka, M., & Fink, J. M. (2020).
Surpassing the resistance quantum with a geometric superinductor. Zenodo. https://doi.org/10.5281/ZENODO.4052882
chicago: Peruzzo, Matilda, Andrea Trioni, Farid Hassani, Martin Zemlicka, and Johannes
M Fink. “Surpassing the Resistance Quantum with a Geometric Superinductor.” Zenodo,
2020. https://doi.org/10.5281/ZENODO.4052882.
ieee: M. Peruzzo, A. Trioni, F. Hassani, M. Zemlicka, and J. M. Fink, “Surpassing
the resistance quantum with a geometric superinductor.” Zenodo, 2020.
ista: Peruzzo M, Trioni A, Hassani F, Zemlicka M, Fink JM. 2020. Surpassing the
resistance quantum with a geometric superinductor, Zenodo, 10.5281/ZENODO.4052882.
mla: Peruzzo, Matilda, et al. Surpassing the Resistance Quantum with a Geometric
Superinductor. Zenodo, 2020, doi:10.5281/ZENODO.4052882.
short: M. Peruzzo, A. Trioni, F. Hassani, M. Zemlicka, J.M. Fink, (2020).
corr_author: '1'
date_created: 2023-05-23T16:42:30Z
date_published: 2020-09-27T00:00:00Z
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text: Recent progress in artificial intelligence is largely attributed to the rapid
development of machine learning, especially in the algorithm and neural network
models. However, it is the performance of the hardware, in particular the energy
efficiency of a computing system that sets the fundamental limit of the capability
of machine learning. Data-centric computing requires a revolution in hardware
systems, since traditional digital computers based on transistors and the von
Neumann architecture were not purposely designed for neuromorphic computing. A
hardware platform based on emerging devices and new architecture is the hope for
future computing with dramatically improved throughput and energy efficiency.
Building such a system, nevertheless, faces a number of challenges, ranging from
materials selection, device optimization, circuit fabrication and system integration,
to name a few. The aim of this Roadmap is to present a snapshot of emerging hardware
technologies that are potentially beneficial for machine learning, providing the
Nanotechnology readers with a perspective of challenges and opportunities in this
burgeoning field.
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- first_name: Brian D
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last_name: Hoskins
- first_name: Matthew W
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last_name: Daniels
- first_name: Advait
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- first_name: James A
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last_name: Liddle
- first_name: Jabez J
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- first_name: Yuchao
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- first_name: Jennifer
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last_name: Rupp
- first_name: Stephen S
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last_name: Nonnenmann
- first_name: Kwang-Ting
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- first_name: Nanbo
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last_name: Gong
- first_name: Miguel Angel
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last_name: Lastras-Montaño
- first_name: A Alec
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last_name: Talin
- first_name: Alberto
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last_name: Salleo
- first_name: Bhavin J
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last_name: Shastri
- first_name: Thomas Ferreira
full_name: de Lima, Thomas Ferreira
last_name: de Lima
- first_name: Paul
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last_name: Prucnal
- first_name: Alexander N
full_name: Tait, Alexander N
last_name: Tait
- first_name: Yichen
full_name: Shen, Yichen
last_name: Shen
- first_name: Huaiyu
full_name: Meng, Huaiyu
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- first_name: Charles
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last_name: Cheng
- first_name: Harish
full_name: Bhaskaran, Harish
last_name: Bhaskaran
- first_name: Deep
full_name: Jariwala, Deep
last_name: Jariwala
- first_name: Han
full_name: Wang, Han
last_name: Wang
- first_name: Jeffrey M
full_name: Shainline, Jeffrey M
last_name: Shainline
- first_name: Kenneth
full_name: Segall, Kenneth
last_name: Segall
- first_name: J Joshua
full_name: Yang, J Joshua
last_name: Yang
- first_name: Kaushik
full_name: Roy, Kaushik
last_name: Roy
- first_name: Suman
full_name: Datta, Suman
last_name: Datta
- first_name: Arijit
full_name: Raychowdhury, Arijit
last_name: Raychowdhury
citation:
ama: Berggren K, Xia Q, Likharev KK, et al. Roadmap on emerging hardware and technology
for machine learning. Nanotechnology. 2020;32(1). doi:10.1088/1361-6528/aba70f
apa: Berggren, K., Xia, Q., Likharev, K. K., Strukov, D. B., Jiang, H., Mikolajick,
T., … Raychowdhury, A. (2020). Roadmap on emerging hardware and technology for
machine learning. Nanotechnology. IOP Publishing. https://doi.org/10.1088/1361-6528/aba70f
chicago: Berggren, Karl, Qiangfei Xia, Konstantin K Likharev, Dmitri B Strukov,
Hao Jiang, Thomas Mikolajick, Damien Querlioz, et al. “Roadmap on Emerging Hardware
and Technology for Machine Learning.” Nanotechnology. IOP Publishing, 2020.
https://doi.org/10.1088/1361-6528/aba70f.
ieee: K. Berggren et al., “Roadmap on emerging hardware and technology for
machine learning,” Nanotechnology, vol. 32, no. 1. IOP Publishing, 2020.
ista: Berggren K, Xia Q, Likharev KK, Strukov DB, Jiang H, Mikolajick T, Querlioz
D, Salinga M, Erickson JR, Pi S, Xiong F, Lin P, Li C, Chen Y, Xiong S, Hoskins
BD, Daniels MW, Madhavan A, Liddle JA, McClelland JJ, Yang Y, Rupp J, Nonnenmann
SS, Cheng K-T, Gong N, Lastras-Montaño MA, Talin AA, Salleo A, Shastri BJ, de
Lima TF, Prucnal P, Tait AN, Shen Y, Meng H, Roques-Carmes C, Cheng Z, Bhaskaran
H, Jariwala D, Wang H, Shainline JM, Segall K, Yang JJ, Roy K, Datta S, Raychowdhury
A. 2020. Roadmap on emerging hardware and technology for machine learning. Nanotechnology.
32(1), 012002.
mla: Berggren, Karl, et al. “Roadmap on Emerging Hardware and Technology for Machine
Learning.” Nanotechnology, vol. 32, no. 1, 012002, IOP Publishing, 2020,
doi:10.1088/1361-6528/aba70f.
short: K. Berggren, Q. Xia, K.K. Likharev, D.B. Strukov, H. Jiang, T. Mikolajick,
D. Querlioz, M. Salinga, J.R. Erickson, S. Pi, F. Xiong, P. Lin, C. Li, Y. Chen,
S. Xiong, B.D. Hoskins, M.W. Daniels, A. Madhavan, J.A. Liddle, J.J. McClelland,
Y. Yang, J. Rupp, S.S. Nonnenmann, K.-T. Cheng, N. Gong, M.A. Lastras-Montaño,
A.A. Talin, A. Salleo, B.J. Shastri, T.F. de Lima, P. Prucnal, A.N. Tait, Y. Shen,
H. Meng, C. Roques-Carmes, Z. Cheng, H. Bhaskaran, D. Jariwala, H. Wang, J.M.
Shainline, K. Segall, J.J. Yang, K. Roy, S. Datta, A. Raychowdhury, Nanotechnology
32 (2020).
date_created: 2026-03-30T12:22:47Z
date_published: 2020-10-19T00:00:00Z
date_updated: 2026-04-15T06:55:27Z
day: '19'
ddc:
- '530'
doi: 10.1088/1361-6528/aba70f
extern: '1'
external_id:
pmid:
- '32679577'
intvolume: ' 32'
issue: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1088/1361-6528/aba70f
month: '10'
oa: 1
oa_version: Published Version
pmid: 1
publication: Nanotechnology
publication_identifier:
eissn:
- 1361-6528
issn:
- 0957-4484
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: Roadmap on emerging hardware and technology for machine learning
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 32
year: '2020'
...
---
_id: '13071'
abstract:
- lang: eng
text: This dataset comprises all data shown in the plots of the main part of the
submitted article "Bidirectional Electro-Optic Wavelength Conversion in the Quantum
Ground State". Additional raw data are available from the corresponding author
on reasonable request.
article_processing_charge: No
author:
- first_name: William J
full_name: Hease, William J
id: 29705398-F248-11E8-B48F-1D18A9856A87
last_name: Hease
orcid: 0000-0001-9868-2166
- first_name: Alfredo R
full_name: Rueda Sanchez, Alfredo R
id: 3B82B0F8-F248-11E8-B48F-1D18A9856A87
last_name: Rueda Sanchez
orcid: 0000-0001-6249-5860
- first_name: Rishabh
full_name: Sahu, Rishabh
id: 47D26E34-F248-11E8-B48F-1D18A9856A87
last_name: Sahu
orcid: 0000-0001-6264-2162
- first_name: Matthias
full_name: Wulf, Matthias
id: 45598606-F248-11E8-B48F-1D18A9856A87
last_name: Wulf
orcid: 0000-0001-6613-1378
- first_name: Georg M
full_name: Arnold, Georg M
id: 3770C838-F248-11E8-B48F-1D18A9856A87
last_name: Arnold
orcid: 0000-0003-1397-7876
- first_name: Harald
full_name: Schwefel, Harald
last_name: Schwefel
- first_name: Johannes M
full_name: Fink, Johannes M
id: 4B591CBA-F248-11E8-B48F-1D18A9856A87
last_name: Fink
orcid: 0000-0001-8112-028X
citation:
ama: Hease WJ, Rueda Sanchez AR, Sahu R, et al. Bidirectional electro-optic wavelength
conversion in the quantum ground state. 2020. doi:10.5281/ZENODO.4266025
apa: Hease, W. J., Rueda Sanchez, A. R., Sahu, R., Wulf, M., Arnold, G. M., Schwefel,
H., & Fink, J. M. (2020). Bidirectional electro-optic wavelength conversion
in the quantum ground state. Zenodo. https://doi.org/10.5281/ZENODO.4266025
chicago: Hease, William J, Alfredo R Rueda Sanchez, Rishabh Sahu, Matthias Wulf,
Georg M Arnold, Harald Schwefel, and Johannes M Fink. “Bidirectional Electro-Optic
Wavelength Conversion in the Quantum Ground State.” Zenodo, 2020. https://doi.org/10.5281/ZENODO.4266025.
ieee: W. J. Hease et al., “Bidirectional electro-optic wavelength conversion
in the quantum ground state.” Zenodo, 2020.
ista: Hease WJ, Rueda Sanchez AR, Sahu R, Wulf M, Arnold GM, Schwefel H, Fink JM.
2020. Bidirectional electro-optic wavelength conversion in the quantum ground
state, Zenodo, 10.5281/ZENODO.4266025.
mla: Hease, William J., et al. Bidirectional Electro-Optic Wavelength Conversion
in the Quantum Ground State. Zenodo, 2020, doi:10.5281/ZENODO.4266025.
short: W.J. Hease, A.R. Rueda Sanchez, R. Sahu, M. Wulf, G.M. Arnold, H. Schwefel,
J.M. Fink, (2020).
corr_author: '1'
date_created: 2023-05-23T16:44:11Z
date_published: 2020-11-10T00:00:00Z
date_updated: 2026-04-15T06:43:26Z
day: '10'
ddc:
- '530'
department:
- _id: JoFi
doi: 10.5281/ZENODO.4266025
main_file_link:
- open_access: '1'
url: https://doi.org/10.5281/zenodo.4266026
month: '11'
oa: 1
oa_version: Published Version
publisher: Zenodo
related_material:
record:
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relation: used_in_publication
status: public
status: public
title: Bidirectional electro-optic wavelength conversion in the quantum ground state
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: research_data_reference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2020'
...
---
OA_place: publisher
OA_type: hybrid
_id: '21525'
abstract:
- lang: eng
text: We present a novel design for an ultracompact, passive light source capable
of generating ultraviolet and X-ray radiation, based on the interaction of free
electrons with the magnetic near-field of a ferromagnet. Our design is motivated
by recent advances in the fabrication of nanostructures, which allow the confinement
of large magnetic fields at the surface of ferromagnetic nanogratings. Using ab
initio simulations and a complementary analytical theory, we show that highly
directional, tunable, monochromatic radiation at high frequencies could be produced
from relatively low-energy electrons within a tabletop design. The output frequency
is tunable in the extreme ultraviolet to hard X-ray range via electron kinetic
energies from 1 keV to 5 MeV and nanograting periods from 1 μm to 5 nm. The proposed
radiation source can achieve the tunability and monochromaticity of current free-electron-driven
sources (free-electron lasers, synchrotrons, and laser-driven undulators), yet
with a significantly reduced scale, cost, and complexity. Our design could help
realize the next generation of tabletop or on-chip X-ray sources.
article_processing_charge: No
article_type: letter_note
arxiv: 1
author:
- first_name: Sophie
full_name: Fisher, Sophie
last_name: Fisher
- first_name: Charles
full_name: Roques-Carmes, Charles
id: e2e68fc9-6505-11ef-a541-eb4e72cc3e82
last_name: Roques-Carmes
- first_name: Nicholas
full_name: Rivera, Nicholas
last_name: Rivera
- first_name: Liang Jie
full_name: Wong, Liang Jie
last_name: Wong
- first_name: Ido
full_name: Kaminer, Ido
last_name: Kaminer
- first_name: Marin
full_name: Soljačić, Marin
last_name: Soljačić
citation:
ama: Fisher S, Roques-Carmes C, Rivera N, Wong LJ, Kaminer I, Soljačić M. Monochromatic
X-ray source based on scattering from a magnetic nanoundulator. ACS Photonics.
2020;7(5):1096-1103. doi:10.1021/acsphotonics.0c00121
apa: Fisher, S., Roques-Carmes, C., Rivera, N., Wong, L. J., Kaminer, I., &
Soljačić, M. (2020). Monochromatic X-ray source based on scattering from a magnetic
nanoundulator. ACS Photonics. American Chemical Society . https://doi.org/10.1021/acsphotonics.0c00121
chicago: Fisher, Sophie, Charles Roques-Carmes, Nicholas Rivera, Liang Jie Wong,
Ido Kaminer, and Marin Soljačić. “Monochromatic X-Ray Source Based on Scattering
from a Magnetic Nanoundulator.” ACS Photonics. American Chemical Society
, 2020. https://doi.org/10.1021/acsphotonics.0c00121.
ieee: S. Fisher, C. Roques-Carmes, N. Rivera, L. J. Wong, I. Kaminer, and M. Soljačić,
“Monochromatic X-ray source based on scattering from a magnetic nanoundulator,”
ACS Photonics, vol. 7, no. 5. American Chemical Society , pp. 1096–1103,
2020.
ista: Fisher S, Roques-Carmes C, Rivera N, Wong LJ, Kaminer I, Soljačić M. 2020.
Monochromatic X-ray source based on scattering from a magnetic nanoundulator.
ACS Photonics. 7(5), 1096–1103.
mla: Fisher, Sophie, et al. “Monochromatic X-Ray Source Based on Scattering from
a Magnetic Nanoundulator.” ACS Photonics, vol. 7, no. 5, American Chemical
Society , 2020, pp. 1096–103, doi:10.1021/acsphotonics.0c00121.
short: S. Fisher, C. Roques-Carmes, N. Rivera, L.J. Wong, I. Kaminer, M. Soljačić,
ACS Photonics 7 (2020) 1096–1103.
date_created: 2026-03-30T12:22:47Z
date_published: 2020-04-01T00:00:00Z
date_updated: 2026-04-15T11:51:29Z
day: '01'
ddc:
- '530'
doi: 10.1021/acsphotonics.0c00121
extern: '1'
external_id:
arxiv:
- '1910.09629'
pmid:
- ' 32596415'
has_accepted_license: '1'
intvolume: ' 7'
issue: '5'
keyword:
- X-ray sources
- free electrons
- nanostructure
- undulator
- synchrotron
- free-electron laser
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1021/acsphotonics.0c00121
month: '04'
oa: 1
oa_version: Published Version
page: 1096-1103
pmid: 1
publication: ACS Photonics
publication_identifier:
eissn:
- 2330-4022
publication_status: published
publisher: 'American Chemical Society '
quality_controlled: '1'
scopus_import: '1'
status: public
title: Monochromatic X-ray source based on scattering from a magnetic nanoundulator
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 7
year: '2020'
...
---
_id: '8535'
abstract:
- lang: eng
text: We propose a method to enhance the visual detail of a water surface simulation.
Our method works as a post-processing step which takes a simulation as input and
increases its apparent resolution by simulating many detailed Lagrangian water
waves on top of it. We extend linear water wave theory to work in non-planar domains
which deform over time, and we discretize the theory using Lagrangian wave packets
attached to spline curves. The method is numerically stable and trivially parallelizable,
and it produces high frequency ripples with dispersive wave-like behaviors customized
to the underlying fluid simulation.
acknowledged_ssus:
- _id: ScienComp
acknowledgement: We wish to thank the anonymous reviewers and the members of the Visual
Computing Group at IST Austria for their valuable feedback. This research was supported
by the Scientific Service Units (SSU) of IST Austria through resources provided
by Scientific Computing. This project has received funding from the European Research
Council (ERC) under the European Union’s Horizon 2020 research and innovation programme
under grant agreement No. 638176 and Marie SkłodowskaCurie Grant Agreement No. 665385.
article_number: '65'
article_processing_charge: No
article_type: original
author:
- first_name: Tomas
full_name: Skrivan, Tomas
id: 486A5A46-F248-11E8-B48F-1D18A9856A87
last_name: Skrivan
- first_name: Andreas
full_name: Soderstrom, Andreas
last_name: Soderstrom
- first_name: John
full_name: Johansson, John
last_name: Johansson
- first_name: Christoph
full_name: Sprenger, Christoph
last_name: Sprenger
- first_name: Ken
full_name: Museth, Ken
last_name: Museth
- first_name: Christopher J
full_name: Wojtan, Christopher J
id: 3C61F1D2-F248-11E8-B48F-1D18A9856A87
last_name: Wojtan
orcid: 0000-0001-6646-5546
citation:
ama: 'Skrivan T, Soderstrom A, Johansson J, Sprenger C, Museth K, Wojtan C. Wave
curves: Simulating Lagrangian water waves on dynamically deforming surfaces. ACM
Transactions on Graphics. 2020;39(4). doi:10.1145/3386569.3392466'
apa: 'Skrivan, T., Soderstrom, A., Johansson, J., Sprenger, C., Museth, K., &
Wojtan, C. (2020). Wave curves: Simulating Lagrangian water waves on dynamically
deforming surfaces. ACM Transactions on Graphics. Association for Computing
Machinery. https://doi.org/10.1145/3386569.3392466'
chicago: 'Skrivan, Tomas, Andreas Soderstrom, John Johansson, Christoph Sprenger,
Ken Museth, and Chris Wojtan. “Wave Curves: Simulating Lagrangian Water Waves
on Dynamically Deforming Surfaces.” ACM Transactions on Graphics. Association
for Computing Machinery, 2020. https://doi.org/10.1145/3386569.3392466.'
ieee: 'T. Skrivan, A. Soderstrom, J. Johansson, C. Sprenger, K. Museth, and C. Wojtan,
“Wave curves: Simulating Lagrangian water waves on dynamically deforming surfaces,”
ACM Transactions on Graphics, vol. 39, no. 4. Association for Computing
Machinery, 2020.'
ista: 'Skrivan T, Soderstrom A, Johansson J, Sprenger C, Museth K, Wojtan C. 2020.
Wave curves: Simulating Lagrangian water waves on dynamically deforming surfaces.
ACM Transactions on Graphics. 39(4), 65.'
mla: 'Skrivan, Tomas, et al. “Wave Curves: Simulating Lagrangian Water Waves on
Dynamically Deforming Surfaces.” ACM Transactions on Graphics, vol. 39,
no. 4, 65, Association for Computing Machinery, 2020, doi:10.1145/3386569.3392466.'
short: T. Skrivan, A. Soderstrom, J. Johansson, C. Sprenger, K. Museth, C. Wojtan,
ACM Transactions on Graphics 39 (2020).
corr_author: '1'
date_created: 2020-09-20T22:01:37Z
date_published: 2020-07-08T00:00:00Z
date_updated: 2026-04-16T08:26:38Z
day: '08'
ddc:
- '000'
department:
- _id: ChWo
doi: 10.1145/3386569.3392466
ec_funded: 1
external_id:
isi:
- '000583700300038'
file:
- access_level: open_access
checksum: c3a680893f01cc4a9e961ff0a4cfa12f
content_type: application/pdf
creator: dernst
date_created: 2020-09-21T07:51:44Z
date_updated: 2020-09-21T07:51:44Z
file_id: '8541'
file_name: 2020_ACM_Skrivan.pdf
file_size: 20223953
relation: main_file
success: 1
file_date_updated: 2020-09-21T07:51:44Z
has_accepted_license: '1'
intvolume: ' 39'
isi: 1
issue: '4'
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
project:
- _id: 2533E772-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '638176'
name: 'Big Splash: Efficient Simulation of Natural Phenomena at Extremely Large
Scales'
- _id: 2564DBCA-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '665385'
name: International IST Doctoral Program
publication: ACM Transactions on Graphics
publication_identifier:
eissn:
- 1557-7368
issn:
- 0730-0301
publication_status: published
publisher: Association for Computing Machinery
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Wave curves: Simulating Lagrangian water waves on dynamically deforming surfaces'
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 39
year: '2020'
...
---
_id: '7339'
abstract:
- lang: eng
text: Cytoskeletal filaments such as microtubules (MTs) and filamentous actin (F-actin)
dynamically support cell structure and functions. In central presynaptic terminals,
F-actin is expressed along the release edge and reportedly plays diverse functional
roles, but whether axonal MTs extend deep into terminals and play any physiological
role remains controversial. At the calyx of Held in rats of either sex, confocal
and high-resolution microscopy revealed that MTs enter deep into presynaptic terminal
swellings and partially colocalize with a subset of synaptic vesicles (SVs). Electrophysiological
analysis demonstrated that depolymerization of MTs specifically prolonged the
slow-recovery time component of EPSCs from short-term depression induced by a
train of high-frequency stimulation, whereas depolymerization of F-actin specifically
prolonged the fast-recovery component. In simultaneous presynaptic and postsynaptic
action potential recordings, depolymerization of MTs or F-actin significantly
impaired the fidelity of high-frequency neurotransmission. We conclude that MTs
and F-actin differentially contribute to slow and fast SV replenishment, thereby
maintaining high-frequency neurotransmission.
article_processing_charge: No
article_type: original
author:
- first_name: Lashmi
full_name: Piriya Ananda Babu, Lashmi
last_name: Piriya Ananda Babu
- first_name: Han Ying
full_name: Wang, Han Ying
last_name: Wang
- first_name: Kohgaku
full_name: Eguchi, Kohgaku
id: 2B7846DC-F248-11E8-B48F-1D18A9856A87
last_name: Eguchi
orcid: 0000-0002-6170-2546
- first_name: Laurent
full_name: Guillaud, Laurent
last_name: Guillaud
- first_name: Tomoyuki
full_name: Takahashi, Tomoyuki
last_name: Takahashi
citation:
ama: Piriya Ananda Babu L, Wang HY, Eguchi K, Guillaud L, Takahashi T. Microtubule
and actin differentially regulate synaptic vesicle cycling to maintain high-frequency
neurotransmission. Journal of neuroscience. 2020;40(1):131-142. doi:10.1523/JNEUROSCI.1571-19.2019
apa: Piriya Ananda Babu, L., Wang, H. Y., Eguchi, K., Guillaud, L., & Takahashi,
T. (2020). Microtubule and actin differentially regulate synaptic vesicle cycling
to maintain high-frequency neurotransmission. Journal of Neuroscience.
Society for Neuroscience. https://doi.org/10.1523/JNEUROSCI.1571-19.2019
chicago: Piriya Ananda Babu, Lashmi, Han Ying Wang, Kohgaku Eguchi, Laurent Guillaud,
and Tomoyuki Takahashi. “Microtubule and Actin Differentially Regulate Synaptic
Vesicle Cycling to Maintain High-Frequency Neurotransmission.” Journal of Neuroscience.
Society for Neuroscience, 2020. https://doi.org/10.1523/JNEUROSCI.1571-19.2019.
ieee: L. Piriya Ananda Babu, H. Y. Wang, K. Eguchi, L. Guillaud, and T. Takahashi,
“Microtubule and actin differentially regulate synaptic vesicle cycling to maintain
high-frequency neurotransmission,” Journal of neuroscience, vol. 40, no.
1. Society for Neuroscience, pp. 131–142, 2020.
ista: Piriya Ananda Babu L, Wang HY, Eguchi K, Guillaud L, Takahashi T. 2020. Microtubule
and actin differentially regulate synaptic vesicle cycling to maintain high-frequency
neurotransmission. Journal of neuroscience. 40(1), 131–142.
mla: Piriya Ananda Babu, Lashmi, et al. “Microtubule and Actin Differentially Regulate
Synaptic Vesicle Cycling to Maintain High-Frequency Neurotransmission.” Journal
of Neuroscience, vol. 40, no. 1, Society for Neuroscience, 2020, pp. 131–42,
doi:10.1523/JNEUROSCI.1571-19.2019.
short: L. Piriya Ananda Babu, H.Y. Wang, K. Eguchi, L. Guillaud, T. Takahashi, Journal
of Neuroscience 40 (2020) 131–142.
date_created: 2020-01-19T23:00:38Z
date_published: 2020-01-02T00:00:00Z
date_updated: 2026-04-16T08:27:29Z
day: '02'
ddc:
- '570'
department:
- _id: RySh
doi: 10.1523/JNEUROSCI.1571-19.2019
external_id:
isi:
- '000505167600013'
pmid:
- '31767677'
file:
- access_level: open_access
checksum: 92f5e8a47f454fc131fb94cd7f106e60
content_type: application/pdf
creator: dernst
date_created: 2020-01-20T14:44:10Z
date_updated: 2020-07-14T12:47:56Z
file_id: '7345'
file_name: 2020_JourNeuroscience_Piriya.pdf
file_size: 4460781
relation: main_file
file_date_updated: 2020-07-14T12:47:56Z
has_accepted_license: '1'
intvolume: ' 40'
isi: 1
issue: '1'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
page: 131-142
pmid: 1
publication: Journal of neuroscience
publication_identifier:
eissn:
- 1529-2401
issn:
- 0270-6474
publication_status: published
publisher: Society for Neuroscience
quality_controlled: '1'
scopus_import: '1'
status: public
title: Microtubule and actin differentially regulate synaptic vesicle cycling to maintain
high-frequency neurotransmission
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 40
year: '2020'
...
---
_id: '8170'
abstract:
- lang: eng
text: "Alignment of OCS, CS2, and I2 molecules embedded in helium nanodroplets is
measured as a function\r\nof time following rotational excitation by a nonresonant,
comparatively weak ps laser pulse. The distinct\r\npeaks in the power spectra,
obtained by Fourier analysis, are used to determine the rotational, B, and\r\ncentrifugal
distortion, D, constants. For OCS, B and D match the values known from IR spectroscopy.
For\r\nCS2 and I2, they are the first experimental results reported. The alignment
dynamics calculated from the\r\ngas-phase rotational Schrödinger equation, using
the experimental in-droplet B and D values, agree in\r\ndetail with the measurement
for all three molecules. The rotational spectroscopy technique for molecules in\r\nhelium
droplets introduced here should apply to a range of molecules and complexes."
acknowledgement: "H. S. acknowledges support from the European Research Council-AdG
(Project No. 320459, DropletControl)\r\nand from The Villum Foundation through a
Villum Investigator Grant No. 25886. M. L. acknowledges support\r\nby the Austrian
Science Fund (FWF), under Project No. P29902-N27, and by the European Research Council\r\n(ERC)
Starting Grant No. 801770 (ANGULON). G. B. acknowledges support from the Austrian
Science Fund\r\n(FWF), under Project No. M2641-N27. I. C. acknowledges support by
the European Union’s Horizon 2020 research and\r\ninnovation programme under the
Marie Skłodowska-Curie Grant Agreement No. 665385. Computational resources for\r\nthe
PIMC simulations were provided by the division for scientific computing at the Johannes
Kepler University."
article_number: '013001'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Adam S.
full_name: Chatterley, Adam S.
last_name: Chatterley
- first_name: Lars
full_name: Christiansen, Lars
last_name: Christiansen
- first_name: Constant A.
full_name: Schouder, Constant A.
last_name: Schouder
- first_name: Anders V.
full_name: Jørgensen, Anders V.
last_name: Jørgensen
- first_name: Benjamin
full_name: Shepperson, Benjamin
last_name: Shepperson
- first_name: Igor
full_name: Cherepanov, Igor
id: 339C7E5A-F248-11E8-B48F-1D18A9856A87
last_name: Cherepanov
- first_name: Giacomo
full_name: Bighin, Giacomo
id: 4CA96FD4-F248-11E8-B48F-1D18A9856A87
last_name: Bighin
orcid: 0000-0001-8823-9777
- first_name: Robert E.
full_name: Zillich, Robert E.
last_name: Zillich
- first_name: Mikhail
full_name: Lemeshko, Mikhail
id: 37CB05FA-F248-11E8-B48F-1D18A9856A87
last_name: Lemeshko
orcid: 0000-0002-6990-7802
- first_name: Henrik
full_name: Stapelfeldt, Henrik
last_name: Stapelfeldt
citation:
ama: 'Chatterley AS, Christiansen L, Schouder CA, et al. Rotational coherence spectroscopy
of molecules in Helium nanodroplets: Reconciling the time and the frequency domains.
Physical Review Letters. 2020;125(1). doi:10.1103/PhysRevLett.125.013001'
apa: 'Chatterley, A. S., Christiansen, L., Schouder, C. A., Jørgensen, A. V., Shepperson,
B., Cherepanov, I., … Stapelfeldt, H. (2020). Rotational coherence spectroscopy
of molecules in Helium nanodroplets: Reconciling the time and the frequency domains.
Physical Review Letters. American Physical Society. https://doi.org/10.1103/PhysRevLett.125.013001'
chicago: 'Chatterley, Adam S., Lars Christiansen, Constant A. Schouder, Anders V.
Jørgensen, Benjamin Shepperson, Igor Cherepanov, Giacomo Bighin, Robert E. Zillich,
Mikhail Lemeshko, and Henrik Stapelfeldt. “Rotational Coherence Spectroscopy of
Molecules in Helium Nanodroplets: Reconciling the Time and the Frequency Domains.”
Physical Review Letters. American Physical Society, 2020. https://doi.org/10.1103/PhysRevLett.125.013001.'
ieee: 'A. S. Chatterley et al., “Rotational coherence spectroscopy of molecules
in Helium nanodroplets: Reconciling the time and the frequency domains,” Physical
Review Letters, vol. 125, no. 1. American Physical Society, 2020.'
ista: 'Chatterley AS, Christiansen L, Schouder CA, Jørgensen AV, Shepperson B, Cherepanov
I, Bighin G, Zillich RE, Lemeshko M, Stapelfeldt H. 2020. Rotational coherence
spectroscopy of molecules in Helium nanodroplets: Reconciling the time and the
frequency domains. Physical Review Letters. 125(1), 013001.'
mla: 'Chatterley, Adam S., et al. “Rotational Coherence Spectroscopy of Molecules
in Helium Nanodroplets: Reconciling the Time and the Frequency Domains.” Physical
Review Letters, vol. 125, no. 1, 013001, American Physical Society, 2020,
doi:10.1103/PhysRevLett.125.013001.'
short: A.S. Chatterley, L. Christiansen, C.A. Schouder, A.V. Jørgensen, B. Shepperson,
I. Cherepanov, G. Bighin, R.E. Zillich, M. Lemeshko, H. Stapelfeldt, Physical
Review Letters 125 (2020).
date_created: 2020-07-26T22:01:02Z
date_published: 2020-07-03T00:00:00Z
date_updated: 2026-04-16T08:21:58Z
day: '03'
department:
- _id: MiLe
doi: 10.1103/PhysRevLett.125.013001
ec_funded: 1
external_id:
arxiv:
- '2006.02694'
isi:
- '000544526900006'
pmid:
- '32678640'
intvolume: ' 125'
isi: 1
issue: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/2006.02694
month: '07'
oa: 1
oa_version: Preprint
pmid: 1
project:
- _id: 26031614-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: P29902
name: Quantum rotations in the presence of a many-body environment
- _id: 2688CF98-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '801770'
name: 'Angulon: physics and applications of a new quasiparticle'
- _id: 26986C82-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: M02641
name: A path-integral approach to composite impurities
- _id: 2564DBCA-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '665385'
name: International IST Doctoral Program
publication: Physical Review Letters
publication_identifier:
eissn:
- 1079-7114
issn:
- 0031-9007
publication_status: published
publisher: American Physical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Rotational coherence spectroscopy of molecules in Helium nanodroplets: Reconciling
the time and the frequency domains'
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 125
year: '2020'
...
---
_id: '7656'
abstract:
- lang: eng
text: 'We propose that correlations among neurons are generically strong enough
to organize neural activity patterns into a discrete set of clusters, which can
each be viewed as a population codeword. Our reasoning starts with the analysis
of retinal ganglion cell data using maximum entropy models, showing that the population
is robustly in a frustrated, marginally sub-critical, or glassy, state. This leads
to an argument that neural populations in many other brain areas might share this
structure. Next, we use latent variable models to show that this glassy state
possesses well-defined clusters of neural activity. Clusters have three appealing
properties: (i) clusters exhibit error correction, i.e., they are reproducibly
elicited by the same stimulus despite variability at the level of constituent
neurons; (ii) clusters encode qualitatively different visual features than their
constituent neurons; and (iii) clusters can be learned by downstream neural circuits
in an unsupervised fashion. We hypothesize that these properties give rise to
a “learnable” neural code which the cortical hierarchy uses to extract increasingly
complex features without supervision or reinforcement.'
article_number: '20'
article_processing_charge: No
article_type: original
author:
- first_name: Michael J.
full_name: Berry, Michael J.
last_name: Berry
- first_name: Gašper
full_name: Tkačik, Gašper
id: 3D494DCA-F248-11E8-B48F-1D18A9856A87
last_name: Tkačik
orcid: 0000-0002-6699-1455
citation:
ama: 'Berry MJ, Tkačik G. Clustering of neural activity: A design principle for
population codes. Frontiers in Computational Neuroscience. 2020;14. doi:10.3389/fncom.2020.00020'
apa: 'Berry, M. J., & Tkačik, G. (2020). Clustering of neural activity: A design
principle for population codes. Frontiers in Computational Neuroscience.
Frontiers. https://doi.org/10.3389/fncom.2020.00020'
chicago: 'Berry, Michael J., and Gašper Tkačik. “Clustering of Neural Activity:
A Design Principle for Population Codes.” Frontiers in Computational Neuroscience.
Frontiers, 2020. https://doi.org/10.3389/fncom.2020.00020.'
ieee: 'M. J. Berry and G. Tkačik, “Clustering of neural activity: A design principle
for population codes,” Frontiers in Computational Neuroscience, vol. 14.
Frontiers, 2020.'
ista: 'Berry MJ, Tkačik G. 2020. Clustering of neural activity: A design principle
for population codes. Frontiers in Computational Neuroscience. 14, 20.'
mla: 'Berry, Michael J., and Gašper Tkačik. “Clustering of Neural Activity: A Design
Principle for Population Codes.” Frontiers in Computational Neuroscience,
vol. 14, 20, Frontiers, 2020, doi:10.3389/fncom.2020.00020.'
short: M.J. Berry, G. Tkačik, Frontiers in Computational Neuroscience 14 (2020).
date_created: 2020-04-12T22:00:40Z
date_published: 2020-03-13T00:00:00Z
date_updated: 2026-04-16T08:28:50Z
day: '13'
ddc:
- '570'
department:
- _id: GaTk
doi: 10.3389/fncom.2020.00020
external_id:
isi:
- '000525543200001'
pmid:
- '32231528'
file:
- access_level: open_access
checksum: 2b1da23823eae9cedbb42d701945b61e
content_type: application/pdf
creator: dernst
date_created: 2020-04-14T12:20:39Z
date_updated: 2020-07-14T12:48:01Z
file_id: '7659'
file_name: 2020_Frontiers_Berry.pdf
file_size: 4082937
relation: main_file
file_date_updated: 2020-07-14T12:48:01Z
has_accepted_license: '1'
intvolume: ' 14'
isi: 1
language:
- iso: eng
month: '03'
oa: 1
oa_version: Published Version
pmid: 1
publication: Frontiers in Computational Neuroscience
publication_identifier:
eissn:
- 1662-5188
publication_status: published
publisher: Frontiers
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Clustering of neural activity: A design principle for population codes'
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 14
year: '2020'
...
---
_id: '7603'
abstract:
- lang: eng
text: Plants are exposed to a variety of abiotic and biotic stresses that may result
in DNA damage. Endogenous processes - such as DNA replication, DNA recombination,
respiration, or photosynthesis - are also a threat to DNA integrity. It is therefore
essential to understand the strategies plants have developed for DNA damage detection,
signaling, and repair. Alternative splicing (AS) is a key post-transcriptional
process with a role in regulation of gene expression. Recent studies demonstrate
that the majority of intron-containing genes in plants are alternatively spliced,
highlighting the importance of AS in plant development and stress response. Not
only does AS ensure a versatile proteome and influence the abundance and availability
of proteins greatly, it has also emerged as an important player in the DNA damage
response (DDR) in animals. Despite extensive studies of DDR carried out in plants,
its regulation at the level of AS has not been comprehensively addressed. Here,
we provide some insights into the interplay between AS and DDR in plants.
article_number: '91'
article_processing_charge: No
article_type: original
author:
- first_name: Barbara Anna
full_name: Nimeth, Barbara Anna
last_name: Nimeth
- first_name: Stefan
full_name: Riegler, Stefan
id: FF6018E0-D806-11E9-8E43-0B14E6697425
last_name: Riegler
orcid: 0000-0003-3413-1343
- first_name: Maria
full_name: Kalyna, Maria
last_name: Kalyna
citation:
ama: Nimeth BA, Riegler S, Kalyna M. Alternative splicing and DNA damage response
in plants. Frontiers in Plant Science. 2020;11. doi:10.3389/fpls.2020.00091
apa: Nimeth, B. A., Riegler, S., & Kalyna, M. (2020). Alternative splicing and
DNA damage response in plants. Frontiers in Plant Science. Frontiers. https://doi.org/10.3389/fpls.2020.00091
chicago: Nimeth, Barbara Anna, Stefan Riegler, and Maria Kalyna. “Alternative Splicing
and DNA Damage Response in Plants.” Frontiers in Plant Science. Frontiers,
2020. https://doi.org/10.3389/fpls.2020.00091.
ieee: B. A. Nimeth, S. Riegler, and M. Kalyna, “Alternative splicing and DNA damage
response in plants,” Frontiers in Plant Science, vol. 11. Frontiers, 2020.
ista: Nimeth BA, Riegler S, Kalyna M. 2020. Alternative splicing and DNA damage
response in plants. Frontiers in Plant Science. 11, 91.
mla: Nimeth, Barbara Anna, et al. “Alternative Splicing and DNA Damage Response
in Plants.” Frontiers in Plant Science, vol. 11, 91, Frontiers, 2020, doi:10.3389/fpls.2020.00091.
short: B.A. Nimeth, S. Riegler, M. Kalyna, Frontiers in Plant Science 11 (2020).
date_created: 2020-03-22T23:00:46Z
date_published: 2020-02-19T00:00:00Z
date_updated: 2026-04-16T08:28:17Z
day: '19'
ddc:
- '580'
department:
- _id: FyKo
doi: 10.3389/fpls.2020.00091
external_id:
isi:
- '000518903600001'
file:
- access_level: open_access
checksum: 57c37209f7b6712ced86c0f11b2be74e
content_type: application/pdf
creator: dernst
date_created: 2020-03-23T09:03:40Z
date_updated: 2020-07-14T12:48:01Z
file_id: '7607'
file_name: 2020_FrontiersPlants_Nimeth.pdf
file_size: 507414
relation: main_file
file_date_updated: 2020-07-14T12:48:01Z
has_accepted_license: '1'
intvolume: ' 11'
isi: 1
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
publication: Frontiers in Plant Science
publication_identifier:
eissn:
- 1664-462X
publication_status: published
publisher: Frontiers
quality_controlled: '1'
scopus_import: '1'
status: public
title: Alternative splicing and DNA damage response in plants
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 11
year: '2020'
...
---
_id: '7212'
abstract:
- lang: eng
text: The fixation probability of a single mutant invading a population of residents
is among the most widely-studied quantities in evolutionary dynamics. Amplifiers
of natural selection are population structures that increase the fixation probability
of advantageous mutants, compared to well-mixed populations. Extensive studies
have shown that many amplifiers exist for the Birth-death Moran process, some
of them substantially increasing the fixation probability or even guaranteeing
fixation in the limit of large population size. On the other hand, no amplifiers
are known for the death-Birth Moran process, and computer-assisted exhaustive
searches have failed to discover amplification. In this work we resolve this disparity,
by showing that any amplification under death-Birth updating is necessarily bounded
and transient. Our boundedness result states that even if a population structure
does amplify selection, the resulting fixation probability is close to that of
the well-mixed population. Our transience result states that for any population
structure there exists a threshold r⋆ such that the population structure ceases
to amplify selection if the mutant fitness advantage r is larger than r⋆. Finally,
we also extend the above results to δ-death-Birth updating, which is a combination
of Birth-death and death-Birth updating. On the positive side, we identify population
structures that maintain amplification for a wide range of values r and δ. These
results demonstrate that amplification of natural selection depends on the specific
mechanisms of the evolutionary process.
article_number: e1007494
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Josef
full_name: Tkadlec, Josef
id: 3F24CCC8-F248-11E8-B48F-1D18A9856A87
last_name: Tkadlec
orcid: 0000-0002-1097-9684
- first_name: Andreas
full_name: Pavlogiannis, Andreas
id: 49704004-F248-11E8-B48F-1D18A9856A87
last_name: Pavlogiannis
orcid: 0000-0002-8943-0722
- first_name: Krishnendu
full_name: Chatterjee, Krishnendu
id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
last_name: Chatterjee
orcid: 0000-0002-4561-241X
- first_name: Martin A.
full_name: Nowak, Martin A.
last_name: Nowak
citation:
ama: Tkadlec J, Pavlogiannis A, Chatterjee K, Nowak MA. Limits on amplifiers of
natural selection under death-Birth updating. PLoS computational biology.
2020;16. doi:10.1371/journal.pcbi.1007494
apa: Tkadlec, J., Pavlogiannis, A., Chatterjee, K., & Nowak, M. A. (2020). Limits
on amplifiers of natural selection under death-Birth updating. PLoS Computational
Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1007494
chicago: Tkadlec, Josef, Andreas Pavlogiannis, Krishnendu Chatterjee, and Martin
A. Nowak. “Limits on Amplifiers of Natural Selection under Death-Birth Updating.”
PLoS Computational Biology. Public Library of Science, 2020. https://doi.org/10.1371/journal.pcbi.1007494.
ieee: J. Tkadlec, A. Pavlogiannis, K. Chatterjee, and M. A. Nowak, “Limits on amplifiers
of natural selection under death-Birth updating,” PLoS computational biology,
vol. 16. Public Library of Science, 2020.
ista: Tkadlec J, Pavlogiannis A, Chatterjee K, Nowak MA. 2020. Limits on amplifiers
of natural selection under death-Birth updating. PLoS computational biology. 16,
e1007494.
mla: Tkadlec, Josef, et al. “Limits on Amplifiers of Natural Selection under Death-Birth
Updating.” PLoS Computational Biology, vol. 16, e1007494, Public Library
of Science, 2020, doi:10.1371/journal.pcbi.1007494.
short: J. Tkadlec, A. Pavlogiannis, K. Chatterjee, M.A. Nowak, PLoS Computational
Biology 16 (2020).
date_created: 2019-12-23T13:45:11Z
date_published: 2020-01-17T00:00:00Z
date_updated: 2026-04-16T08:32:38Z
day: '17'
ddc:
- '000'
department:
- _id: KrCh
doi: 10.1371/journal.pcbi.1007494
ec_funded: 1
external_id:
arxiv:
- '1906.02785'
isi:
- '000510916500025'
file:
- access_level: open_access
checksum: ce32ee2d2f53aed832f78bbd47e882df
content_type: application/pdf
creator: dernst
date_created: 2020-02-03T07:32:42Z
date_updated: 2020-07-14T12:47:53Z
file_id: '7441'
file_name: 2020_PlosCompBio_Tkadlec.pdf
file_size: 1817531
relation: main_file
file_date_updated: 2020-07-14T12:47:53Z
has_accepted_license: '1'
intvolume: ' 16'
isi: 1
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
project:
- _id: 2581B60A-B435-11E9-9278-68D0E5697425
call_identifier: FP7
grant_number: '279307'
name: 'Quantitative Graph Games: Theory and Applications'
- _id: 2584A770-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: P 23499-N23
name: Modern Graph Algorithmic Techniques in Formal Verification
- _id: 25863FF4-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: S11407
name: Game Theory
publication: PLoS computational biology
publication_identifier:
eissn:
- 1553-7358
issn:
- 1553-734X
publication_status: published
publisher: Public Library of Science
quality_controlled: '1'
related_material:
record:
- id: '7196'
relation: part_of_dissertation
status: public
scopus_import: '1'
status: public
title: Limits on amplifiers of natural selection under death-Birth updating
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 16
year: '2020'
...
---
_id: '8384'
abstract:
- lang: eng
text: Previous research on animations of soap bubbles, films, and foams largely
focuses on the motion and geometric shape of the bubble surface. These works neglect
the evolution of the bubble’s thickness, which is normally responsible for visual
phenomena like surface vortices, Newton’s interference patterns, capillary waves,
and deformation-dependent rupturing of films in a foam. In this paper, we model
these natural phenomena by introducing the film thickness as a reduced degree
of freedom in the Navier-Stokes equations and deriving their equations of motion.
We discretize the equations on a nonmanifold triangle mesh surface and couple
it to an existing bubble solver. In doing so, we also introduce an incompressible
fluid solver for 2.5D films and a novel advection algorithm for convecting fields
across non-manifold surface junctions. Our simulations enhance state-of-the-art
bubble solvers with additional effects caused by convection, rippling, draining,
and evaporation of the thin film.
acknowledged_ssus:
- _id: ScienComp
acknowledgement: "We wish to thank the anonymous reviewers and the members of the
Visual Computing Group at IST Austria for their valuable feedback, especially Camille
Schreck for her help in rendering. This research was supported by the Scientific
Service Units (SSU) of IST Austria through resources provided by Scientific Computing.
We would like to thank the authors of [Belcour and Barla 2017] for providing their
implementation, the authors of [Atkins and Elliott 2010] and [Seychelles et al.
2008] for allowing us to use their results, and Rok Grah for helpful discussions.
Finally, we thank Ryoichi Ando for many discussions from the beginning of the project
that resulted in important contents of the paper including our formulation, numerical
scheme, and initial implementation. This project has received funding from the\r\nEuropean
Research Council (ERC) under the European Union’s Horizon 2020 research and innovation
programme under grant agreement No. 638176."
article_number: '31'
article_processing_charge: No
article_type: original
author:
- first_name: Sadashige
full_name: Ishida, Sadashige
id: 6F7C4B96-A8E9-11E9-A7CA-09ECE5697425
last_name: Ishida
orcid: 0000-0002-3121-3100
- first_name: Peter
full_name: Synak, Peter
id: 331776E2-F248-11E8-B48F-1D18A9856A87
last_name: Synak
- first_name: Fumiya
full_name: Narita, Fumiya
last_name: Narita
- first_name: Toshiya
full_name: Hachisuka, Toshiya
last_name: Hachisuka
- first_name: Christopher J
full_name: Wojtan, Christopher J
id: 3C61F1D2-F248-11E8-B48F-1D18A9856A87
last_name: Wojtan
orcid: 0000-0001-6646-5546
citation:
ama: Ishida S, Synak P, Narita F, Hachisuka T, Wojtan C. A model for soap film dynamics
with evolving thickness. ACM Transactions on Graphics. 2020;39(4). doi:10.1145/3386569.3392405
apa: Ishida, S., Synak, P., Narita, F., Hachisuka, T., & Wojtan, C. (2020).
A model for soap film dynamics with evolving thickness. ACM Transactions on
Graphics. Association for Computing Machinery. https://doi.org/10.1145/3386569.3392405
chicago: Ishida, Sadashige, Peter Synak, Fumiya Narita, Toshiya Hachisuka, and Chris
Wojtan. “A Model for Soap Film Dynamics with Evolving Thickness.” ACM Transactions
on Graphics. Association for Computing Machinery, 2020. https://doi.org/10.1145/3386569.3392405.
ieee: S. Ishida, P. Synak, F. Narita, T. Hachisuka, and C. Wojtan, “A model for
soap film dynamics with evolving thickness,” ACM Transactions on Graphics,
vol. 39, no. 4. Association for Computing Machinery, 2020.
ista: Ishida S, Synak P, Narita F, Hachisuka T, Wojtan C. 2020. A model for soap
film dynamics with evolving thickness. ACM Transactions on Graphics. 39(4), 31.
mla: Ishida, Sadashige, et al. “A Model for Soap Film Dynamics with Evolving Thickness.”
ACM Transactions on Graphics, vol. 39, no. 4, 31, Association for Computing
Machinery, 2020, doi:10.1145/3386569.3392405.
short: S. Ishida, P. Synak, F. Narita, T. Hachisuka, C. Wojtan, ACM Transactions
on Graphics 39 (2020).
date_created: 2020-09-13T22:01:18Z
date_published: 2020-07-08T00:00:00Z
date_updated: 2026-04-16T08:29:36Z
day: '08'
ddc:
- '000'
department:
- _id: ChWo
doi: 10.1145/3386569.3392405
ec_funded: 1
external_id:
isi:
- '000583700300004'
file:
- access_level: open_access
checksum: 813831ca91319d794d9748c276b24578
content_type: application/pdf
creator: dernst
date_created: 2020-11-23T09:03:19Z
date_updated: 2020-11-23T09:03:19Z
file_id: '8795'
file_name: 2020_soapfilm_submitted.pdf
file_size: 14935529
relation: main_file
success: 1
file_date_updated: 2020-11-23T09:03:19Z
has_accepted_license: '1'
intvolume: ' 39'
isi: 1
issue: '4'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1145/3386569.3392405
month: '07'
oa: 1
oa_version: Submitted Version
project:
- _id: 2533E772-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '638176'
name: 'Big Splash: Efficient Simulation of Natural Phenomena at Extremely Large
Scales'
publication: ACM Transactions on Graphics
publication_identifier:
eissn:
- 1557-7368
issn:
- 0730-0301
publication_status: published
publisher: Association for Computing Machinery
quality_controlled: '1'
related_material:
record:
- id: '19630'
relation: dissertation_contains
status: public
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title: A model for soap film dynamics with evolving thickness
type: journal_article
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volume: 39
year: '2020'
...
---
_id: '8385'
abstract:
- lang: eng
text: 'We present a method for animating yarn-level cloth effects using a thin-shell
solver. We accomplish this through numerical homogenization: we first use a large
number of yarn-level simulations to build a model of the potential energy density
of the cloth, and then use this energy density function to compute forces in a
thin shell simulator. We model several yarn-based materials, including both woven
and knitted fabrics. Our model faithfully reproduces expected effects like the
stiffness of woven fabrics, and the highly deformable nature and anisotropy of
knitted fabrics. Our approach does not require any real-world experiments nor
measurements; because the method is based entirely on simulations, it can generate
entirely new material models quickly, without the need for testing apparatuses
or human intervention. We provide data-driven models of several woven and knitted
fabrics, which can be used for efficient simulation with an off-the-shelf cloth
solver.'
acknowledged_ssus:
- _id: ScienComp
acknowledgement: "We wish to thank the anonymous reviewers and the members of the
Visual Computing Group at IST Austria for their valuable feedback. We also thank
the creators of the Berkeley Garment Library [de Joya et al. 2012] for providing
garment meshes, [Krishnamurthy and Levoy 1996] and [Turk and Levoy 1994] for the
armadillo and bunny meshes, the creators of libWetCloth [Fei et al. 2018] for their
implementation of discrete elastic rod forces, and Tomáš Skřivan for\r\ninspiring
discussions and help with Mathematica code generation. This research was supported
by the Scientific Service Units (SSU) of IST Austria through resources provided
by Scientific Computing. This project has received funding from the European Research
Council (ERC) under the European Union’s Horizon 2020 research and innovation programme
under grant agreement No. 638176. Rahul Narain is supported by a Pankaj Gupta Young
Faculty Fellowship and a gift from Adobe Inc."
article_number: '48'
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author:
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full_name: Sperl, Georg
id: 4DD40360-F248-11E8-B48F-1D18A9856A87
last_name: Sperl
- first_name: Rahul
full_name: Narain, Rahul
last_name: Narain
- first_name: Christopher J
full_name: Wojtan, Christopher J
id: 3C61F1D2-F248-11E8-B48F-1D18A9856A87
last_name: Wojtan
orcid: 0000-0001-6646-5546
citation:
ama: Sperl G, Narain R, Wojtan C. Homogenized yarn-level cloth. ACM Transactions
on Graphics. 2020;39(4). doi:10.1145/3386569.3392412
apa: Sperl, G., Narain, R., & Wojtan, C. (2020). Homogenized yarn-level cloth.
ACM Transactions on Graphics. Association for Computing Machinery. https://doi.org/10.1145/3386569.3392412
chicago: Sperl, Georg, Rahul Narain, and Chris Wojtan. “Homogenized Yarn-Level Cloth.”
ACM Transactions on Graphics. Association for Computing Machinery, 2020.
https://doi.org/10.1145/3386569.3392412.
ieee: G. Sperl, R. Narain, and C. Wojtan, “Homogenized yarn-level cloth,” ACM
Transactions on Graphics, vol. 39, no. 4. Association for Computing Machinery,
2020.
ista: Sperl G, Narain R, Wojtan C. 2020. Homogenized yarn-level cloth. ACM Transactions
on Graphics. 39(4), 48.
mla: Sperl, Georg, et al. “Homogenized Yarn-Level Cloth.” ACM Transactions on
Graphics, vol. 39, no. 4, 48, Association for Computing Machinery, 2020, doi:10.1145/3386569.3392412.
short: G. Sperl, R. Narain, C. Wojtan, ACM Transactions on Graphics 39 (2020).
corr_author: '1'
date_created: 2020-09-13T22:01:18Z
date_published: 2020-07-08T00:00:00Z
date_updated: 2026-04-16T08:31:55Z
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call_identifier: H2020
grant_number: '638176'
name: 'Big Splash: Efficient Simulation of Natural Phenomena at Extremely Large
Scales'
publication: ACM Transactions on Graphics
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---
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_id: '7196'
abstract:
- lang: eng
text: 'In this thesis we study certain mathematical aspects of evolution. The two
primary forces that drive an evolutionary process are mutation and selection.
Mutation generates new variants in a population. Selection chooses among the variants
depending on the reproductive rates of individuals. Evolutionary processes are
intrinsically random – a new mutation that is initially present in the population
at low frequency can go extinct, even if it confers a reproductive advantage.
The overall rate of evolution is largely determined by two quantities: the probability
that an invading advantageous mutation spreads through the population (called
fixation probability) and the time until it does so (called fixation time). Both
those quantities crucially depend not only on the strength of the invading mutation
but also on the population structure. In this thesis, we aim to understand how
the underlying population structure affects the overall rate of evolution. Specifically,
we study population structures that increase the fixation probability of advantageous
mutants (called amplifiers of selection). Broadly speaking, our results are of
three different types: We present various strong amplifiers, we identify regimes
under which only limited amplification is feasible, and we propose population
structures that provide different tradeoffs between high fixation probability
and short fixation time.'
alternative_title:
- ISTA Thesis
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full_name: Tkadlec, Josef
id: 3F24CCC8-F248-11E8-B48F-1D18A9856A87
last_name: Tkadlec
orcid: 0000-0002-1097-9684
citation:
ama: Tkadlec J. A role of graphs in evolutionary processes. 2020. doi:10.15479/AT:ISTA:7196
apa: Tkadlec, J. (2020). A role of graphs in evolutionary processes. Institute
of Science and Technology Austria. https://doi.org/10.15479/AT:ISTA:7196
chicago: Tkadlec, Josef. “A Role of Graphs in Evolutionary Processes.” Institute
of Science and Technology Austria, 2020. https://doi.org/10.15479/AT:ISTA:7196.
ieee: J. Tkadlec, “A role of graphs in evolutionary processes,” Institute of Science
and Technology Austria, 2020.
ista: Tkadlec J. 2020. A role of graphs in evolutionary processes. Institute of
Science and Technology Austria.
mla: Tkadlec, Josef. A Role of Graphs in Evolutionary Processes. Institute
of Science and Technology Austria, 2020, doi:10.15479/AT:ISTA:7196.
short: J. Tkadlec, A Role of Graphs in Evolutionary Processes, Institute of Science
and Technology Austria, 2020.
corr_author: '1'
date_created: 2019-12-20T12:26:36Z
date_published: 2020-01-12T00:00:00Z
date_updated: 2026-04-16T08:32:37Z
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supervisor:
- first_name: Krishnendu
full_name: Chatterjee, Krishnendu
id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
last_name: Chatterjee
orcid: 0000-0002-4561-241X
title: A role of graphs in evolutionary processes
type: dissertation
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
year: '2020'
...