---
_id: '299'
abstract:
- lang: eng
  text: We introduce in this paper   AMT 2.0 , a tool for qualitative and quantitative
    analysis of hybrid continuous and Boolean signals that combine numerical values
    and discrete events. The evaluation of the signals is based on rich temporal specifications
    expressed in extended Signal Temporal Logic (xSTL), which integrates Timed Regular
    Expressions (TRE) within Signal Temporal Logic (STL). The tool features qualitative
    monitoring (property satisfaction checking), trace diagnostics for explaining
    and justifying property violations and specification-driven measurement of quantitative
    features of the signal.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Dejan
  full_name: Nickovic, Dejan
  id: 41BCEE5C-F248-11E8-B48F-1D18A9856A87
  last_name: Nickovic
- first_name: Olivier
  full_name: Lebeltel, Olivier
  last_name: Lebeltel
- first_name: Oded
  full_name: Maler, Oded
  last_name: Maler
- first_name: Thomas
  full_name: Ferrere, Thomas
  id: 40960E6E-F248-11E8-B48F-1D18A9856A87
  last_name: Ferrere
  orcid: 0000-0001-5199-3143
- first_name: Dogan
  full_name: Ulus, Dogan
  last_name: Ulus
citation:
  ama: 'Nickovic D, Lebeltel O, Maler O, Ferrere T, Ulus D. AMT 2.0: Qualitative and
    quantitative trace analysis with extended signal temporal logic. In: Beyer D,
    Huisman M, eds. Vol 10806. Springer; 2018:303-319. doi:<a href="https://doi.org/10.1007/978-3-319-89963-3_18">10.1007/978-3-319-89963-3_18</a>'
  apa: 'Nickovic, D., Lebeltel, O., Maler, O., Ferrere, T., &#38; Ulus, D. (2018).
    AMT 2.0: Qualitative and quantitative trace analysis with extended signal temporal
    logic. In D. Beyer &#38; M. Huisman (Eds.) (Vol. 10806, pp. 303–319). Presented
    at the TACAS: Tools and Algorithms for the Construction and Analysis of Systems,
    Thessaloniki, Greece: Springer. <a href="https://doi.org/10.1007/978-3-319-89963-3_18">https://doi.org/10.1007/978-3-319-89963-3_18</a>'
  chicago: 'Nickovic, Dejan, Olivier Lebeltel, Oded Maler, Thomas Ferrere, and Dogan
    Ulus. “AMT 2.0: Qualitative and Quantitative Trace Analysis with Extended Signal
    Temporal Logic.” edited by Dirk Beyer and Marieke Huisman, 10806:303–19. Springer,
    2018. <a href="https://doi.org/10.1007/978-3-319-89963-3_18">https://doi.org/10.1007/978-3-319-89963-3_18</a>.'
  ieee: 'D. Nickovic, O. Lebeltel, O. Maler, T. Ferrere, and D. Ulus, “AMT 2.0: Qualitative
    and quantitative trace analysis with extended signal temporal logic,” presented
    at the TACAS: Tools and Algorithms for the Construction and Analysis of Systems,
    Thessaloniki, Greece, 2018, vol. 10806, pp. 303–319.'
  ista: 'Nickovic D, Lebeltel O, Maler O, Ferrere T, Ulus D. 2018. AMT 2.0: Qualitative
    and quantitative trace analysis with extended signal temporal logic. TACAS: Tools
    and Algorithms for the Construction and Analysis of Systems, LNCS, vol. 10806,
    303–319.'
  mla: 'Nickovic, Dejan, et al. <i>AMT 2.0: Qualitative and Quantitative Trace Analysis
    with Extended Signal Temporal Logic</i>. Edited by Dirk Beyer and Marieke Huisman,
    vol. 10806, Springer, 2018, pp. 303–19, doi:<a href="https://doi.org/10.1007/978-3-319-89963-3_18">10.1007/978-3-319-89963-3_18</a>.'
  short: D. Nickovic, O. Lebeltel, O. Maler, T. Ferrere, D. Ulus, in:, D. Beyer, M.
    Huisman (Eds.), Springer, 2018, pp. 303–319.
conference:
  end_date: 2018-04-20
  location: Thessaloniki, Greece
  name: 'TACAS: Tools and Algorithms for the Construction and Analysis of Systems'
  start_date: 2018-04-14
corr_author: '1'
date_created: 2018-12-11T11:45:41Z
date_published: 2018-04-14T00:00:00Z
date_updated: 2024-10-09T20:58:19Z
day: '14'
ddc:
- '000'
department:
- _id: ToHe
doi: 10.1007/978-3-319-89963-3_18
editor:
- first_name: Dirk
  full_name: Beyer, Dirk
  last_name: Beyer
- first_name: Marieke
  full_name: Huisman, Marieke
  last_name: Huisman
external_id:
  isi:
  - '00445822600018'
file:
- access_level: open_access
  checksum: e11db3b9c8e27a1c7d1c738cc5e4d25a
  content_type: application/pdf
  creator: dernst
  date_created: 2019-02-06T07:33:05Z
  date_updated: 2020-07-14T12:45:58Z
  file_id: '5928'
  file_name: 2018_LNCS_Nickovic.pdf
  file_size: 3267209
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file_date_updated: 2020-07-14T12:45:58Z
has_accepted_license: '1'
intvolume: '     10806'
isi: 1
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
page: 303 - 319
publication_status: published
publisher: Springer
publist_id: '7582'
quality_controlled: '1'
related_material:
  record:
  - id: '10861'
    relation: later_version
    status: public
scopus_import: '1'
status: public
title: 'AMT 2.0: Qualitative and quantitative trace analysis with extended signal
  temporal logic'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: conference
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 10806
year: '2018'
...
---
_id: '300'
abstract:
- lang: eng
  text: We introduce a formal quantitative notion of “bit security” for a general
    type of cryptographic games (capturing both decision and search problems), aimed
    at capturing the intuition that a cryptographic primitive with k-bit security
    is as hard to break as an ideal cryptographic function requiring a brute force
    attack on a k-bit key space. Our new definition matches the notion of bit security
    commonly used by cryptographers and cryptanalysts when studying search (e.g.,
    key recovery) problems, where the use of the traditional definition is well established.
    However, it produces a quantitatively different metric in the case of decision
    (indistinguishability) problems, where the use of (a straightforward generalization
    of) the traditional definition is more problematic and leads to a number of paradoxical
    situations or mismatches between theoretical/provable security and practical/common
    sense intuition. Key to our new definition is to consider adversaries that may
    explicitly declare failure of the attack. We support and justify the new definition
    by proving a number of technical results, including tight reductions between several
    standard cryptographic problems, a new hybrid theorem that preserves bit security,
    and an application to the security analysis of indistinguishability primitives
    making use of (approximate) floating point numbers. This is the first result showing
    that (standard precision) 53-bit floating point numbers can be used to achieve
    100-bit security in the context of cryptographic primitives with general indistinguishability-based
    security definitions. Previous results of this type applied only to search problems,
    or special types of decision problems.
acknowledgement: Research supported in part by the Defense Advanced Research Projects
  Agency (DARPA) and the U.S. Army Research Office under the SafeWare program. Opinions,
  findings and conclusions or recommendations expressed in this material are those
  of the author(s) and do not necessarily reflect the views, position or policy of
  the Government. The second author was also supported by the European Research Council,
  ERC consolidator grant (682815 - TOCNeT).
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Daniele
  full_name: Micciancio, Daniele
  last_name: Micciancio
- first_name: Michael
  full_name: Walter, Michael
  id: 488F98B0-F248-11E8-B48F-1D18A9856A87
  last_name: Walter
  orcid: 0000-0003-3186-2482
citation:
  ama: 'Micciancio D, Walter M. On the bit security of cryptographic primitives. In:
    Vol 10820. Springer; 2018:3-28. doi:<a href="https://doi.org/10.1007/978-3-319-78381-9_1">10.1007/978-3-319-78381-9_1</a>'
  apa: 'Micciancio, D., &#38; Walter, M. (2018). On the bit security of cryptographic
    primitives (Vol. 10820, pp. 3–28). Presented at the Eurocrypt: Advances in Cryptology,
    Tel Aviv, Israel: Springer. <a href="https://doi.org/10.1007/978-3-319-78381-9_1">https://doi.org/10.1007/978-3-319-78381-9_1</a>'
  chicago: Micciancio, Daniele, and Michael Walter. “On the Bit Security of Cryptographic
    Primitives,” 10820:3–28. Springer, 2018. <a href="https://doi.org/10.1007/978-3-319-78381-9_1">https://doi.org/10.1007/978-3-319-78381-9_1</a>.
  ieee: 'D. Micciancio and M. Walter, “On the bit security of cryptographic primitives,”
    presented at the Eurocrypt: Advances in Cryptology, Tel Aviv, Israel, 2018, vol.
    10820, pp. 3–28.'
  ista: 'Micciancio D, Walter M. 2018. On the bit security of cryptographic primitives.
    Eurocrypt: Advances in Cryptology, LNCS, vol. 10820, 3–28.'
  mla: Micciancio, Daniele, and Michael Walter. <i>On the Bit Security of Cryptographic
    Primitives</i>. Vol. 10820, Springer, 2018, pp. 3–28, doi:<a href="https://doi.org/10.1007/978-3-319-78381-9_1">10.1007/978-3-319-78381-9_1</a>.
  short: D. Micciancio, M. Walter, in:, Springer, 2018, pp. 3–28.
conference:
  end_date: 2018-05-03
  location: Tel Aviv, Israel
  name: 'Eurocrypt: Advances in Cryptology'
  start_date: 2018-04-29
corr_author: '1'
date_created: 2018-12-11T11:45:42Z
date_published: 2018-03-31T00:00:00Z
date_updated: 2025-04-14T07:22:06Z
day: '31'
department:
- _id: KrPi
doi: 10.1007/978-3-319-78381-9_1
ec_funded: 1
external_id:
  isi:
  - '000517097500001'
intvolume: '     10820'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://eprint.iacr.org/2018/077
month: '03'
oa: 1
oa_version: Submitted Version
page: 3 - 28
project:
- _id: 258AA5B2-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '682815'
  name: Teaching Old Crypto New Tricks
publication_status: published
publisher: Springer
publist_id: '7581'
quality_controlled: '1'
scopus_import: '1'
status: public
title: On the bit security of cryptographic primitives
type: conference
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 10820
year: '2018'
...
---
_id: '302'
abstract:
- lang: eng
  text: At ITCS 2013, Mahmoody, Moran and Vadhan [MMV13] introduce and construct publicly
    verifiable proofs of sequential work, which is a protocol for proving that one
    spent sequential computational work related to some statement. The original motivation
    for such proofs included non-interactive time-stamping and universally verifiable
    CPU benchmarks. A more recent application, and our main motivation, are blockchain
    designs, where proofs of sequential work can be used – in combination with proofs
    of space – as a more ecological and economical substitute for proofs of work which
    are currently used to secure Bitcoin and other cryptocurrencies. The construction
    proposed by [MMV13] is based on a hash function and can be proven secure in the
    random oracle model, or assuming inherently sequential hash-functions, which is
    a new standard model assumption introduced in their work. In a proof of sequential
    work, a prover gets a “statement” χ, a time parameter N and access to a hash-function
    H, which for the security proof is modelled as a random oracle. Correctness requires
    that an honest prover can make a verifier accept making only N queries to H, while
    soundness requires that any prover who makes the verifier accept must have made
    (almost) N sequential queries to H. Thus a solution constitutes a proof that N
    time passed since χ was received. Solutions must be publicly verifiable in time
    at most polylogarithmic in N. The construction of [MMV13] is based on “depth-robust”
    graphs, and as a consequence has rather poor concrete parameters. But the major
    drawback is that the prover needs not just N time, but also N space to compute
    a proof. In this work we propose a proof of sequential work which is much simpler,
    more efficient and achieves much better concrete bounds. Most importantly, the
    space required can be as small as log (N) (but we get better soundness using slightly
    more memory than that). An open problem stated by [MMV13] that our construction
    does not solve either is achieving a “unique” proof, where even a cheating prover
    can only generate a single accepting proof. This property would be extremely useful
    for applications to blockchains.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Bram
  full_name: Cohen, Bram
  last_name: Cohen
- first_name: Krzysztof Z
  full_name: Pietrzak, Krzysztof Z
  id: 3E04A7AA-F248-11E8-B48F-1D18A9856A87
  last_name: Pietrzak
  orcid: 0000-0002-9139-1654
citation:
  ama: 'Cohen B, Pietrzak KZ. Simple proofs of sequential work. In: Vol 10821. Springer;
    2018:451-467. doi:<a href="https://doi.org/10.1007/978-3-319-78375-8_15">10.1007/978-3-319-78375-8_15</a>'
  apa: 'Cohen, B., &#38; Pietrzak, K. Z. (2018). Simple proofs of sequential work
    (Vol. 10821, pp. 451–467). Presented at the Eurocrypt: Advances in Cryptology,
    Tel Aviv, Israel: Springer. <a href="https://doi.org/10.1007/978-3-319-78375-8_15">https://doi.org/10.1007/978-3-319-78375-8_15</a>'
  chicago: Cohen, Bram, and Krzysztof Z Pietrzak. “Simple Proofs of Sequential Work,”
    10821:451–67. Springer, 2018. <a href="https://doi.org/10.1007/978-3-319-78375-8_15">https://doi.org/10.1007/978-3-319-78375-8_15</a>.
  ieee: 'B. Cohen and K. Z. Pietrzak, “Simple proofs of sequential work,” presented
    at the Eurocrypt: Advances in Cryptology, Tel Aviv, Israel, 2018, vol. 10821,
    pp. 451–467.'
  ista: 'Cohen B, Pietrzak KZ. 2018. Simple proofs of sequential work. Eurocrypt:
    Advances in Cryptology, LNCS, vol. 10821, 451–467.'
  mla: Cohen, Bram, and Krzysztof Z. Pietrzak. <i>Simple Proofs of Sequential Work</i>.
    Vol. 10821, Springer, 2018, pp. 451–67, doi:<a href="https://doi.org/10.1007/978-3-319-78375-8_15">10.1007/978-3-319-78375-8_15</a>.
  short: B. Cohen, K.Z. Pietrzak, in:, Springer, 2018, pp. 451–467.
conference:
  end_date: 2018-05-03
  location: Tel Aviv, Israel
  name: 'Eurocrypt: Advances in Cryptology'
  start_date: 2018-04-29
date_created: 2018-12-11T11:45:42Z
date_published: 2018-05-29T00:00:00Z
date_updated: 2025-04-14T07:22:06Z
day: '29'
department:
- _id: KrPi
doi: 10.1007/978-3-319-78375-8_15
ec_funded: 1
external_id:
  isi:
  - '000517098700015'
intvolume: '     10821'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://eprint.iacr.org/2018/183.pdf
month: '05'
oa: 1
oa_version: Submitted Version
page: 451 - 467
project:
- _id: 258AA5B2-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '682815'
  name: Teaching Old Crypto New Tricks
publication_status: published
publisher: Springer
publist_id: '7579'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Simple proofs of sequential work
type: conference
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 10821
year: '2018'
...
---
_id: '303'
abstract:
- lang: eng
  text: The theory of tropical series, that we develop here, firstly appeared in the
    study of the growth of pluriharmonic functions. Motivated by waves in sandpile
    models we introduce a dynamic on the set of tropical series, and it is experimentally
    observed that this dynamic obeys a power law. So, this paper serves as a compilation
    of results we need for other articles and also introduces several objects interesting
    by themselves.
acknowledgement: The first author, Nikita Kalinin, is funded by SNCF PostDoc.Mobility
  grant 168647. Support from the Basic Research Program of the National Research University
  Higher School of Economics is gratefully acknowledged. The second author, Mikhail
  Shkolnikov, is supported in part by the grant 159240 of the Swiss National Science
  Foundation as well as by the National Center of Competence in Research SwissMAP
  of the Swiss National Science Foundation.
article_processing_charge: No
arxiv: 1
author:
- first_name: Nikita
  full_name: Kalinin, Nikita
  last_name: Kalinin
- first_name: Mikhail
  full_name: Shkolnikov, Mikhail
  id: 35084A62-F248-11E8-B48F-1D18A9856A87
  last_name: Shkolnikov
  orcid: 0000-0002-4310-178X
citation:
  ama: Kalinin N, Shkolnikov M. Introduction to tropical series and wave dynamic on
    them. <i>Discrete and Continuous Dynamical Systems- Series A</i>. 2018;38(6):2827-2849.
    doi:<a href="https://doi.org/10.3934/dcds.2018120">10.3934/dcds.2018120</a>
  apa: Kalinin, N., &#38; Shkolnikov, M. (2018). Introduction to tropical series and
    wave dynamic on them. <i>Discrete and Continuous Dynamical Systems- Series A</i>.
    AIMS. <a href="https://doi.org/10.3934/dcds.2018120">https://doi.org/10.3934/dcds.2018120</a>
  chicago: Kalinin, Nikita, and Mikhail Shkolnikov. “Introduction to Tropical Series
    and Wave Dynamic on Them.” <i>Discrete and Continuous Dynamical Systems- Series
    A</i>. AIMS, 2018. <a href="https://doi.org/10.3934/dcds.2018120">https://doi.org/10.3934/dcds.2018120</a>.
  ieee: N. Kalinin and M. Shkolnikov, “Introduction to tropical series and wave dynamic
    on them,” <i>Discrete and Continuous Dynamical Systems- Series A</i>, vol. 38,
    no. 6. AIMS, pp. 2827–2849, 2018.
  ista: Kalinin N, Shkolnikov M. 2018. Introduction to tropical series and wave dynamic
    on them. Discrete and Continuous Dynamical Systems- Series A. 38(6), 2827–2849.
  mla: Kalinin, Nikita, and Mikhail Shkolnikov. “Introduction to Tropical Series and
    Wave Dynamic on Them.” <i>Discrete and Continuous Dynamical Systems- Series A</i>,
    vol. 38, no. 6, AIMS, 2018, pp. 2827–49, doi:<a href="https://doi.org/10.3934/dcds.2018120">10.3934/dcds.2018120</a>.
  short: N. Kalinin, M. Shkolnikov, Discrete and Continuous Dynamical Systems- Series
    A 38 (2018) 2827–2849.
date_created: 2018-12-11T11:45:43Z
date_published: 2018-06-01T00:00:00Z
date_updated: 2023-09-12T07:45:37Z
day: '01'
department:
- _id: TaHa
doi: 10.3934/dcds.2018120
external_id:
  arxiv:
  - '1706.03062'
  isi:
  - '000438818400007'
intvolume: '        38'
isi: 1
issue: '6'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1706.03062
month: '06'
oa: 1
oa_version: Submitted Version
page: 2827 - 2849
publication: Discrete and Continuous Dynamical Systems- Series A
publication_status: published
publisher: AIMS
publist_id: '7576'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Introduction to tropical series and wave dynamic on them
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 38
year: '2018'
...
---
_id: '304'
abstract:
- lang: eng
  text: "Additive manufacturing has recently seen drastic improvements in resolution,
    making it now possible to fabricate features at scales of hundreds or even dozens
    of nanometers, which previously required very expensive lithographic methods.\r\nAs
    a result, additive manufacturing now seems poised for optical applications, including
    those relevant to computer graphics, such as material design, as well as display
    and imaging applications.\r\n \r\nIn this work, we explore the use of additive
    manufacturing for generating structural colors, where the structures are designed
    using a fabrication-aware optimization process.\r\nThis requires a combination
    of full-wave simulation, a feasible parameterization of the design space, and
    a tailored optimization procedure.\r\nMany of these components should be re-usable
    for the design of other optical structures at this scale.\r\n \r\nWe show initial
    results of material samples fabricated based on our designs.\r\nWhile these suffer
    from the prototype character of state-of-the-art fabrication hardware, we believe
    they clearly demonstrate the potential of additive nanofabrication for structural
    colors and other graphics applications."
acknowledgement: This work was in part supported by King Abdullah University of Science
  and Technology Baseline Funding.
alternative_title:
- ACM Transactions on Graphics
article_number: '159'
article_processing_charge: No
author:
- first_name: Thomas
  full_name: Auzinger, Thomas
  id: 4718F954-F248-11E8-B48F-1D18A9856A87
  last_name: Auzinger
  orcid: 0000-0002-1546-3265
- first_name: Wolfgang
  full_name: Heidrich, Wolfgang
  last_name: Heidrich
- first_name: Bernd
  full_name: Bickel, Bernd
  id: 49876194-F248-11E8-B48F-1D18A9856A87
  last_name: Bickel
  orcid: 0000-0001-6511-9385
citation:
  ama: Auzinger T, Heidrich W, Bickel B. Computational design of nanostructural color
    for additive manufacturing. <i>ACM Transactions on Graphics</i>. 2018;37(4). doi:<a
    href="https://doi.org/10.1145/3197517.3201376">10.1145/3197517.3201376</a>
  apa: Auzinger, T., Heidrich, W., &#38; Bickel, B. (2018). Computational design of
    nanostructural color for additive manufacturing. <i>ACM Transactions on Graphics</i>.
    ACM. <a href="https://doi.org/10.1145/3197517.3201376">https://doi.org/10.1145/3197517.3201376</a>
  chicago: Auzinger, Thomas, Wolfgang Heidrich, and Bernd Bickel. “Computational Design
    of Nanostructural Color for Additive Manufacturing.” <i>ACM Transactions on Graphics</i>.
    ACM, 2018. <a href="https://doi.org/10.1145/3197517.3201376">https://doi.org/10.1145/3197517.3201376</a>.
  ieee: T. Auzinger, W. Heidrich, and B. Bickel, “Computational design of nanostructural
    color for additive manufacturing,” <i>ACM Transactions on Graphics</i>, vol. 37,
    no. 4. ACM, 2018.
  ista: Auzinger T, Heidrich W, Bickel B. 2018. Computational design of nanostructural
    color for additive manufacturing. ACM Transactions on Graphics. 37(4), 159.
  mla: Auzinger, Thomas, et al. “Computational Design of Nanostructural Color for
    Additive Manufacturing.” <i>ACM Transactions on Graphics</i>, vol. 37, no. 4,
    159, ACM, 2018, doi:<a href="https://doi.org/10.1145/3197517.3201376">10.1145/3197517.3201376</a>.
  short: T. Auzinger, W. Heidrich, B. Bickel, ACM Transactions on Graphics 37 (2018).
date_created: 2018-12-11T11:45:43Z
date_published: 2018-08-01T00:00:00Z
date_updated: 2025-04-14T07:28:57Z
day: '01'
ddc:
- '000'
- '535'
- '680'
department:
- _id: BeBi
doi: 10.1145/3197517.3201376
ec_funded: 1
external_id:
  isi:
  - '000448185000120'
file:
- access_level: open_access
  checksum: dcdcc955a4c1c6d2599aeebb97d2e7b9
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  creator: system
  date_created: 2018-12-12T10:18:14Z
  date_updated: 2020-07-14T12:45:59Z
  file_id: '5334'
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  file_size: 10751684
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  date_created: 2018-12-12T10:18:15Z
  date_updated: 2020-07-14T12:45:59Z
  file_id: '5335'
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has_accepted_license: '1'
intvolume: '        37'
isi: 1
issue: '4'
language:
- iso: eng
month: '08'
oa: 1
oa_version: Submitted Version
project:
- _id: 24F9549A-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '715767'
  name: 'MATERIALIZABLE: Intelligent fabrication-oriented Computational Design and
    Modeling'
publication: ACM Transactions on Graphics
publication_status: published
publisher: ACM
pubrep_id: '1028'
quality_controlled: '1'
related_material:
  link:
  - description: News on IST Homepage
    relation: press_release
    url: https://ist.ac.at/en/news/color-effects-from-transparent-3d-printed-nanostructures/
scopus_import: '1'
status: public
title: Computational design of nanostructural color for additive manufacturing
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 37
year: '2018'
...
---
_id: '306'
abstract:
- lang: eng
  text: A cornerstone of statistical inference, the maximum entropy framework is being
    increasingly applied to construct descriptive and predictive models of biological
    systems, especially complex biological networks, from large experimental data
    sets. Both its broad applicability and the success it obtained in different contexts
    hinge upon its conceptual simplicity and mathematical soundness. Here we try to
    concisely review the basic elements of the maximum entropy principle, starting
    from the notion of ‘entropy’, and describe its usefulness for the analysis of
    biological systems. As examples, we focus specifically on the problem of reconstructing
    gene interaction networks from expression data and on recent work attempting to
    expand our system-level understanding of bacterial metabolism. Finally, we highlight
    some extensions and potential limitations of the maximum entropy approach, and
    point to more recent developments that are likely to play a key role in the upcoming
    challenges of extracting structures and information from increasingly rich, high-throughput
    biological data.
article_number: e00596
author:
- first_name: Andrea
  full_name: De Martino, Andrea
  last_name: De Martino
- first_name: Daniele
  full_name: De Martino, Daniele
  id: 3FF5848A-F248-11E8-B48F-1D18A9856A87
  last_name: De Martino
  orcid: 0000-0002-5214-4706
citation:
  ama: De Martino A, De Martino D. An introduction to the maximum entropy approach
    and its application to inference problems in biology. <i>Heliyon</i>. 2018;4(4).
    doi:<a href="https://doi.org/10.1016/j.heliyon.2018.e00596">10.1016/j.heliyon.2018.e00596</a>
  apa: De Martino, A., &#38; De Martino, D. (2018). An introduction to the maximum
    entropy approach and its application to inference problems in biology. <i>Heliyon</i>.
    Elsevier. <a href="https://doi.org/10.1016/j.heliyon.2018.e00596">https://doi.org/10.1016/j.heliyon.2018.e00596</a>
  chicago: De Martino, Andrea, and Daniele De Martino. “An Introduction to the Maximum
    Entropy Approach and Its Application to Inference Problems in Biology.” <i>Heliyon</i>.
    Elsevier, 2018. <a href="https://doi.org/10.1016/j.heliyon.2018.e00596">https://doi.org/10.1016/j.heliyon.2018.e00596</a>.
  ieee: A. De Martino and D. De Martino, “An introduction to the maximum entropy approach
    and its application to inference problems in biology,” <i>Heliyon</i>, vol. 4,
    no. 4. Elsevier, 2018.
  ista: De Martino A, De Martino D. 2018. An introduction to the maximum entropy approach
    and its application to inference problems in biology. Heliyon. 4(4), e00596.
  mla: De Martino, Andrea, and Daniele De Martino. “An Introduction to the Maximum
    Entropy Approach and Its Application to Inference Problems in Biology.” <i>Heliyon</i>,
    vol. 4, no. 4, e00596, Elsevier, 2018, doi:<a href="https://doi.org/10.1016/j.heliyon.2018.e00596">10.1016/j.heliyon.2018.e00596</a>.
  short: A. De Martino, D. De Martino, Heliyon 4 (2018).
corr_author: '1'
date_created: 2018-12-11T11:45:44Z
date_published: 2018-04-01T00:00:00Z
date_updated: 2024-10-09T20:58:19Z
day: '01'
ddc:
- '530'
department:
- _id: GaTk
doi: 10.1016/j.heliyon.2018.e00596
ec_funded: 1
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  file_size: 994490
  relation: main_file
file_date_updated: 2020-07-14T12:45:59Z
has_accepted_license: '1'
intvolume: '         4'
issue: '4'
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
project:
- _id: 25681D80-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '291734'
  name: International IST Postdoc Fellowship Programme
publication: Heliyon
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: 1
status: public
title: An introduction to the maximum entropy approach and its application to inference
  problems in biology
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 4
year: '2018'
...
---
_id: '308'
abstract:
- lang: eng
  text: Migrating cells penetrate tissue barriers during development, inflammatory
    responses, and tumor metastasis. We study if migration in vivo in such three-dimensionally
    confined environments requires changes in the mechanical properties of the surrounding
    cells using embryonic Drosophila melanogaster hemocytes, also called macrophages,
    as a model. We find that macrophage invasion into the germband through transient
    separation of the apposing ectoderm and mesoderm requires cell deformations and
    reductions in apical tension in the ectoderm. Interestingly, the genetic pathway
    governing these mechanical shifts acts downstream of the only known tumor necrosis
    factor superfamily member in Drosophila, Eiger, and its receptor, Grindelwald.
    Eiger-Grindelwald signaling reduces levels of active Myosin in the germband ectodermal
    cortex through the localization of a Crumbs complex component, Patj (Pals-1-associated
    tight junction protein). We therefore elucidate a distinct molecular pathway that
    controls tissue tension and demonstrate the importance of such regulation for
    invasive migration in vivo.
acknowledged_ssus:
- _id: SSU
article_processing_charge: No
article_type: original
author:
- first_name: Aparna
  full_name: Ratheesh, Aparna
  id: 2F064CFE-F248-11E8-B48F-1D18A9856A87
  last_name: Ratheesh
  orcid: 0000-0001-7190-0776
- first_name: Julia
  full_name: Biebl, Julia
  id: 3CCBB46E-F248-11E8-B48F-1D18A9856A87
  last_name: Biebl
- first_name: Michael
  full_name: Smutny, Michael
  last_name: Smutny
- first_name: Jana
  full_name: Veselá, Jana
  id: 433253EE-F248-11E8-B48F-1D18A9856A87
  last_name: Veselá
- first_name: Ekaterina
  full_name: Papusheva, Ekaterina
  id: 41DB591E-F248-11E8-B48F-1D18A9856A87
  last_name: Papusheva
- first_name: Gabriel
  full_name: Krens, Gabriel
  id: 2B819732-F248-11E8-B48F-1D18A9856A87
  last_name: Krens
  orcid: 0000-0003-4761-5996
- first_name: Walter
  full_name: Kaufmann, Walter
  id: 3F99E422-F248-11E8-B48F-1D18A9856A87
  last_name: Kaufmann
  orcid: 0000-0001-9735-5315
- first_name: Attila
  full_name: György, Attila
  id: 3BCEDBE0-F248-11E8-B48F-1D18A9856A87
  last_name: György
  orcid: 0000-0002-1819-198X
- first_name: Alessandra M
  full_name: Casano, Alessandra M
  id: 3DBA3F4E-F248-11E8-B48F-1D18A9856A87
  last_name: Casano
  orcid: 0000-0002-6009-6804
- first_name: Daria E
  full_name: Siekhaus, Daria E
  id: 3D224B9E-F248-11E8-B48F-1D18A9856A87
  last_name: Siekhaus
  orcid: 0000-0001-8323-8353
citation:
  ama: Ratheesh A, Bicher J, Smutny M, et al. Drosophila TNF modulates tissue tension
    in the embryo to facilitate macrophage invasive migration. <i>Developmental Cell</i>.
    2018;45(3):331-346. doi:<a href="https://doi.org/10.1016/j.devcel.2018.04.002">10.1016/j.devcel.2018.04.002</a>
  apa: Ratheesh, A., Bicher, J., Smutny, M., Veselá, J., Papusheva, E., Krens, G.,
    … Siekhaus, D. E. (2018). Drosophila TNF modulates tissue tension in the embryo
    to facilitate macrophage invasive migration. <i>Developmental Cell</i>. Elsevier.
    <a href="https://doi.org/10.1016/j.devcel.2018.04.002">https://doi.org/10.1016/j.devcel.2018.04.002</a>
  chicago: Ratheesh, Aparna, Julia Bicher, Michael Smutny, Jana Veselá, Ekaterina
    Papusheva, Gabriel Krens, Walter Kaufmann, Attila György, Alessandra M Casano,
    and Daria E Siekhaus. “Drosophila TNF Modulates Tissue Tension in the Embryo to
    Facilitate Macrophage Invasive Migration.” <i>Developmental Cell</i>. Elsevier,
    2018. <a href="https://doi.org/10.1016/j.devcel.2018.04.002">https://doi.org/10.1016/j.devcel.2018.04.002</a>.
  ieee: A. Ratheesh <i>et al.</i>, “Drosophila TNF modulates tissue tension in the
    embryo to facilitate macrophage invasive migration,” <i>Developmental Cell</i>,
    vol. 45, no. 3. Elsevier, pp. 331–346, 2018.
  ista: Ratheesh A, Bicher J, Smutny M, Veselá J, Papusheva E, Krens G, Kaufmann W,
    György A, Casano AM, Siekhaus DE. 2018. Drosophila TNF modulates tissue tension
    in the embryo to facilitate macrophage invasive migration. Developmental Cell.
    45(3), 331–346.
  mla: Ratheesh, Aparna, et al. “Drosophila TNF Modulates Tissue Tension in the Embryo
    to Facilitate Macrophage Invasive Migration.” <i>Developmental Cell</i>, vol.
    45, no. 3, Elsevier, 2018, pp. 331–46, doi:<a href="https://doi.org/10.1016/j.devcel.2018.04.002">10.1016/j.devcel.2018.04.002</a>.
  short: A. Ratheesh, J. Bicher, M. Smutny, J. Veselá, E. Papusheva, G. Krens, W.
    Kaufmann, A. György, A.M. Casano, D.E. Siekhaus, Developmental Cell 45 (2018)
    331–346.
corr_author: '1'
date_created: 2018-12-11T11:45:44Z
date_published: 2018-05-07T00:00:00Z
date_updated: 2026-06-18T18:37:46Z
day: '07'
ddc:
- '570'
department:
- _id: DaSi
- _id: CaHe
- _id: Bio
- _id: EM-Fac
- _id: MiSi
doi: 10.1016/j.devcel.2018.04.002
ec_funded: 1
external_id:
  isi:
  - '000432461400009'
  pmid:
  - '29738712'
intvolume: '        45'
isi: 1
issue: '3'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1016/j.devcel.2018.04.002
month: '05'
oa: 1
oa_version: Published Version
page: 331 - 346
pmid: 1
project:
- _id: 253B6E48-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P29638
  name: The role of Drosophila TNF alpha in immune cell invasion
- _id: 2536F660-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '334077'
  name: Investigating the role of transporters in invasive migration through junctions
publication: Developmental Cell
publication_status: published
publisher: Elsevier
quality_controlled: '1'
related_material:
  link:
  - description: News on IST Homepage
    relation: press_release
    url: https://ist.ac.at/en/news/cells-change-tension-to-make-tissue-barriers-easier-to-get-through/
scopus_import: '1'
status: public
title: Drosophila TNF modulates tissue tension in the embryo to facilitate macrophage
  invasive migration
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 45
year: '2018'
...
---
_id: '1215'
abstract:
- lang: eng
  text: "Two generalizations of Itô formula to infinite-dimensional spaces are given.\r\nThe
    first one, in Hilbert spaces, extends the classical one by taking advantage of\r\ncancellations
    when they occur in examples and it is applied to the case of a group\r\ngenerator.
    The second one, based on the previous one and a limit procedure, is an Itô\r\nformula
    in a special class of Banach spaces having a product structure with the noise\r\nin
    a Hilbert component; again the key point is the extension due to a cancellation.
    This\r\nextension to Banach spaces and in particular the specific cancellation
    are motivated\r\nby path-dependent Itô calculus."
acknowledgement: Open access funding provided by Institute of Science and Technology
  (IST Austria). The second named author benefited partially from the support of the
  “FMJH Program Gaspard Monge in Optimization and Operations Research” (Project 2014-1607H).
  He is also grateful for the invitation to the Department of Mathematics of the University
  of Pisa. The third named author is grateful for the invitation to ENSTA.
article_processing_charge: Yes (via OA deal)
author:
- first_name: Franco
  full_name: Flandoli, Franco
  last_name: Flandoli
- first_name: Francesco
  full_name: Russo, Francesco
  last_name: Russo
- first_name: Giovanni A
  full_name: Zanco, Giovanni A
  id: 47491882-F248-11E8-B48F-1D18A9856A87
  last_name: Zanco
citation:
  ama: Flandoli F, Russo F, Zanco GA. Infinite-dimensional calculus under weak spatial
    regularity of the processes. <i>Journal of Theoretical Probability</i>. 2018;31(2):789-826.
    doi:<a href="https://doi.org/10.1007/s10959-016-0724-2">10.1007/s10959-016-0724-2</a>
  apa: Flandoli, F., Russo, F., &#38; Zanco, G. A. (2018). Infinite-dimensional calculus
    under weak spatial regularity of the processes. <i>Journal of Theoretical Probability</i>.
    Springer. <a href="https://doi.org/10.1007/s10959-016-0724-2">https://doi.org/10.1007/s10959-016-0724-2</a>
  chicago: Flandoli, Franco, Francesco Russo, and Giovanni A Zanco. “Infinite-Dimensional
    Calculus under Weak Spatial Regularity of the Processes.” <i>Journal of Theoretical
    Probability</i>. Springer, 2018. <a href="https://doi.org/10.1007/s10959-016-0724-2">https://doi.org/10.1007/s10959-016-0724-2</a>.
  ieee: F. Flandoli, F. Russo, and G. A. Zanco, “Infinite-dimensional calculus under
    weak spatial regularity of the processes,” <i>Journal of Theoretical Probability</i>,
    vol. 31, no. 2. Springer, pp. 789–826, 2018.
  ista: Flandoli F, Russo F, Zanco GA. 2018. Infinite-dimensional calculus under weak
    spatial regularity of the processes. Journal of Theoretical Probability. 31(2),
    789–826.
  mla: Flandoli, Franco, et al. “Infinite-Dimensional Calculus under Weak Spatial
    Regularity of the Processes.” <i>Journal of Theoretical Probability</i>, vol.
    31, no. 2, Springer, 2018, pp. 789–826, doi:<a href="https://doi.org/10.1007/s10959-016-0724-2">10.1007/s10959-016-0724-2</a>.
  short: F. Flandoli, F. Russo, G.A. Zanco, Journal of Theoretical Probability 31
    (2018) 789–826.
corr_author: '1'
date_created: 2018-12-11T11:50:45Z
date_published: 2018-06-01T00:00:00Z
date_updated: 2025-09-22T09:36:02Z
day: '01'
ddc:
- '519'
department:
- _id: JaMa
doi: 10.1007/s10959-016-0724-2
external_id:
  isi:
  - '000432743300007'
file:
- access_level: open_access
  checksum: 47686d58ec21c164540f1a980ff2163f
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  creator: system
  date_created: 2018-12-12T10:17:13Z
  date_updated: 2020-07-14T12:44:39Z
  file_id: '5266'
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  file_size: 671125
  relation: main_file
file_date_updated: 2020-07-14T12:44:39Z
has_accepted_license: '1'
intvolume: '        31'
isi: 1
issue: '2'
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
page: 789-826
project:
- _id: B67AFEDC-15C9-11EA-A837-991A96BB2854
  name: IST Austria Open Access Fund
publication: Journal of Theoretical Probability
publication_status: published
publisher: Springer
publist_id: '6119'
pubrep_id: '712'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Infinite-dimensional calculus under weak spatial regularity of the processes
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 31
year: '2018'
...
---
_id: '12603'
abstract:
- lang: eng
  text: We present a field-data rich modelling analysis to reconstruct the climatic
    forcing, glacier response, and runoff generation from a high-elevation catchment
    in central Chile over the period 2000–2015 to provide insights into the differing
    contributions of debris-covered and debris-free glaciers under current and future
    changing climatic conditions. Model simulations with the physically based glacio-hydrological
    model TOPKAPI-ETH reveal a period of neutral or slightly positive mass balance
    between 2000 and 2010, followed by a transition to increasingly large annual mass
    losses, associated with a recent mega drought. Mass losses commence earlier, and
    are more severe, for a heavily debris-covered glacier, most likely due to its
    strong dependence on snow avalanche accumulation, which has declined in recent
    years. Catchment runoff shows a marked decreasing trend over the study period,
    but with high interannual variability directly linked to winter snow accumulation,
    and high contribution from ice melt in dry periods and drought conditions. The
    study demonstrates the importance of incorporating local-scale processes such
    as snow avalanche accumulation and spatially variable debris thickness, in understanding
    the responses of different glacier types to climate change. We highlight the increased
    dependency of runoff from high Andean catchments on the diminishing resource of
    glacier ice during dry years.
article_processing_charge: No
article_type: original
author:
- first_name: Flavia
  full_name: Burger, Flavia
  last_name: Burger
- first_name: Alvaro
  full_name: Ayala, Alvaro
  last_name: Ayala
- first_name: David
  full_name: Farias, David
  last_name: Farias
- first_name: Thomas E.
  full_name: Shaw, Thomas E.
  last_name: Shaw
- first_name: Shelley
  full_name: MacDonell, Shelley
  last_name: MacDonell
- first_name: Ben
  full_name: Brock, Ben
  last_name: Brock
- first_name: James
  full_name: McPhee, James
  last_name: McPhee
- first_name: Francesca
  full_name: Pellicciotti, Francesca
  id: b28f055a-81ea-11ed-b70c-a9fe7f7b0e70
  last_name: Pellicciotti
citation:
  ama: 'Burger F, Ayala A, Farias D, et al. Interannual variability in glacier contribution
    to runoff from a high‐elevation Andean catchment: Understanding the role of debris
    cover in glacier hydrology. <i>Hydrological Processes</i>. 2018;33(2):214-229.
    doi:<a href="https://doi.org/10.1002/hyp.13354">10.1002/hyp.13354</a>'
  apa: 'Burger, F., Ayala, A., Farias, D., Shaw, T. E., MacDonell, S., Brock, B.,
    … Pellicciotti, F. (2018). Interannual variability in glacier contribution to
    runoff from a high‐elevation Andean catchment: Understanding the role of debris
    cover in glacier hydrology. <i>Hydrological Processes</i>. Wiley. <a href="https://doi.org/10.1002/hyp.13354">https://doi.org/10.1002/hyp.13354</a>'
  chicago: 'Burger, Flavia, Alvaro Ayala, David Farias, Thomas E. Shaw, Shelley MacDonell,
    Ben Brock, James McPhee, and Francesca Pellicciotti. “Interannual Variability
    in Glacier Contribution to Runoff from a High‐elevation Andean Catchment: Understanding
    the Role of Debris Cover in Glacier Hydrology.” <i>Hydrological Processes</i>.
    Wiley, 2018. <a href="https://doi.org/10.1002/hyp.13354">https://doi.org/10.1002/hyp.13354</a>.'
  ieee: 'F. Burger <i>et al.</i>, “Interannual variability in glacier contribution
    to runoff from a high‐elevation Andean catchment: Understanding the role of debris
    cover in glacier hydrology,” <i>Hydrological Processes</i>, vol. 33, no. 2. Wiley,
    pp. 214–229, 2018.'
  ista: 'Burger F, Ayala A, Farias D, Shaw TE, MacDonell S, Brock B, McPhee J, Pellicciotti
    F. 2018. Interannual variability in glacier contribution to runoff from a high‐elevation
    Andean catchment: Understanding the role of debris cover in glacier hydrology.
    Hydrological Processes. 33(2), 214–229.'
  mla: 'Burger, Flavia, et al. “Interannual Variability in Glacier Contribution to
    Runoff from a High‐elevation Andean Catchment: Understanding the Role of Debris
    Cover in Glacier Hydrology.” <i>Hydrological Processes</i>, vol. 33, no. 2, Wiley,
    2018, pp. 214–29, doi:<a href="https://doi.org/10.1002/hyp.13354">10.1002/hyp.13354</a>.'
  short: F. Burger, A. Ayala, D. Farias, T.E. Shaw, S. MacDonell, B. Brock, J. McPhee,
    F. Pellicciotti, Hydrological Processes 33 (2018) 214–229.
date_created: 2023-02-20T08:13:14Z
date_published: 2018-11-26T00:00:00Z
date_updated: 2023-02-28T11:49:36Z
day: '26'
doi: 10.1002/hyp.13354
extern: '1'
intvolume: '        33'
issue: '2'
keyword:
- Water Science and Technology
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1002/hyp.13354
month: '11'
oa: 1
oa_version: Published Version
page: 214-229
publication: Hydrological Processes
publication_identifier:
  eissn:
  - 1099-1085
  issn:
  - 0885-6087
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Interannual variability in glacier contribution to runoff from a high‐elevation
  Andean catchment: Understanding the role of debris cover in glacier hydrology'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 33
year: '2018'
...
---
_id: '12604'
abstract:
- lang: eng
  text: Glaciers in the high mountains of Asia provide an important water resource
    for millions of people. Many of these glaciers are partially covered by rocky
    debris, which protects the ice from solar radiation and warm air. However, studies
    have found that the surface of these debris-covered glaciers is actually lowering
    as fast as glaciers without debris. Water ponded on the surface of the glaciers
    may be partially responsible, as water can absorb atmospheric energy very efficiently.
    However, the overall effect of these ponds has not been thoroughly assessed yet.
    We study a valley in Nepal for which we have extensive weather measurements, and
    we use a numerical model to calculate the energy absorbed by ponds on the surface
    of the glaciers over 6 months. As we have not observed each individual pond thoroughly,
    we run the model 5,000 times with different setups. We find that ponds are extremely
    important for glacier melt and absorb energy 14 times as quickly as the debris-covered
    ice. Although the ponds account for 1% of the glacier area covered by rocks, and
    only 0.3% of the total glacier area, they absorb enough energy to account for
    one eighth of the whole valley's ice loss.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Evan S.
  full_name: Miles, Evan S.
  last_name: Miles
- first_name: Ian
  full_name: Willis, Ian
  last_name: Willis
- first_name: Pascal
  full_name: Buri, Pascal
  last_name: Buri
- first_name: Jakob F.
  full_name: Steiner, Jakob F.
  last_name: Steiner
- first_name: Neil S.
  full_name: Arnold, Neil S.
  last_name: Arnold
- first_name: Francesca
  full_name: Pellicciotti, Francesca
  id: b28f055a-81ea-11ed-b70c-a9fe7f7b0e70
  last_name: Pellicciotti
citation:
  ama: Miles ES, Willis I, Buri P, Steiner JF, Arnold NS, Pellicciotti F. Surface
    pond energy absorption across four Himalayan Glaciers accounts for 1/8 of total
    catchment ice loss. <i>Geophysical Research Letters</i>. 2018;45(19):10464-10473.
    doi:<a href="https://doi.org/10.1029/2018gl079678">10.1029/2018gl079678</a>
  apa: Miles, E. S., Willis, I., Buri, P., Steiner, J. F., Arnold, N. S., &#38; Pellicciotti,
    F. (2018). Surface pond energy absorption across four Himalayan Glaciers accounts
    for 1/8 of total catchment ice loss. <i>Geophysical Research Letters</i>. American
    Geophysical Union. <a href="https://doi.org/10.1029/2018gl079678">https://doi.org/10.1029/2018gl079678</a>
  chicago: Miles, Evan S., Ian Willis, Pascal Buri, Jakob F. Steiner, Neil S. Arnold,
    and Francesca Pellicciotti. “Surface Pond Energy Absorption across Four Himalayan
    Glaciers Accounts for 1/8 of Total Catchment Ice Loss.” <i>Geophysical Research
    Letters</i>. American Geophysical Union, 2018. <a href="https://doi.org/10.1029/2018gl079678">https://doi.org/10.1029/2018gl079678</a>.
  ieee: E. S. Miles, I. Willis, P. Buri, J. F. Steiner, N. S. Arnold, and F. Pellicciotti,
    “Surface pond energy absorption across four Himalayan Glaciers accounts for 1/8
    of total catchment ice loss,” <i>Geophysical Research Letters</i>, vol. 45, no.
    19. American Geophysical Union, pp. 10464–10473, 2018.
  ista: Miles ES, Willis I, Buri P, Steiner JF, Arnold NS, Pellicciotti F. 2018. Surface
    pond energy absorption across four Himalayan Glaciers accounts for 1/8 of total
    catchment ice loss. Geophysical Research Letters. 45(19), 10464–10473.
  mla: Miles, Evan S., et al. “Surface Pond Energy Absorption across Four Himalayan
    Glaciers Accounts for 1/8 of Total Catchment Ice Loss.” <i>Geophysical Research
    Letters</i>, vol. 45, no. 19, American Geophysical Union, 2018, pp. 10464–73,
    doi:<a href="https://doi.org/10.1029/2018gl079678">10.1029/2018gl079678</a>.
  short: E.S. Miles, I. Willis, P. Buri, J.F. Steiner, N.S. Arnold, F. Pellicciotti,
    Geophysical Research Letters 45 (2018) 10464–10473.
date_created: 2023-02-20T08:13:18Z
date_published: 2018-10-18T00:00:00Z
date_updated: 2023-02-28T11:46:48Z
day: '18'
doi: 10.1029/2018gl079678
extern: '1'
intvolume: '        45'
issue: '19'
keyword:
- General Earth and Planetary Sciences
- Geophysics
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1029/2018GL079678
month: '10'
oa: 1
oa_version: Published Version
page: 10464-10473
publication: Geophysical Research Letters
publication_identifier:
  eissn:
  - 1944-8007
  issn:
  - 0094-8276
publication_status: published
publisher: American Geophysical Union
quality_controlled: '1'
scopus_import: '1'
status: public
title: Surface pond energy absorption across four Himalayan Glaciers accounts for
  1/8 of total catchment ice loss
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 45
year: '2018'
...
---
_id: '12605'
abstract:
- lang: eng
  text: Snow depth patterns over glaciers are controlled by precipitation, snow redistribution
    due to wind and avalanches, and the exchange of energy with the atmosphere that
    determines snow ablation. While many studies have advanced the understanding of
    ablation processes, less is known about winter snow patterns and their variability
    over glaciers. We analyze snow depth on Haut Glacier d'Arolla, Switzerland, in
    the two winter seasons 2006–2007 and 2010–2011 to (1) understand whether snow
    depth over an alpine glacier at the end of the accumulation season exhibits a
    behavior similar to the one observed on single slopes and vegetated areas; and
    (2) investigate the snow pattern consistency over the two accumulation seasons.
    We perform this analysis on a data set of high-resolution lidar-derived snow depth
    using variograms and fractal parameters. Our first main result is that snow depth
    patterns on the glacier exhibit a multiscale behavior, with a scale break around
    20 m after which the fractal dimension increases, indicating more autocorrelated
    structure before the scale break than after. Second, this behavior is consistent
    over the two years, with fractal parameters and their spatial variability almost
    constant in the two seasons. We also show that snow depth patterns exhibit a distinct
    behavior in the glacier tongue and the upper catchment, with longer correlation
    distances on the tongue in the direction of the main winds, suggesting spatial
    distinctions that are likely induced by different processes and that should be
    taken into account when extrapolating snow depth from limited samples.
article_processing_charge: No
article_type: original
author:
- first_name: I.
  full_name: Clemenzi, I.
  last_name: Clemenzi
- first_name: Francesca
  full_name: Pellicciotti, Francesca
  id: b28f055a-81ea-11ed-b70c-a9fe7f7b0e70
  last_name: Pellicciotti
  orcid: 0000-0002-5554-8087
- first_name: P.
  full_name: Burlando, P.
  last_name: Burlando
citation:
  ama: Clemenzi I, Pellicciotti F, Burlando P. Snow depth structure, fractal behavior,
    and interannual consistency over Haut Glacier d’Arolla, Switzerland. <i>Water
    Resources Research</i>. 2018;54(10):7929-7945. doi:<a href="https://doi.org/10.1029/2017wr021606">10.1029/2017wr021606</a>
  apa: Clemenzi, I., Pellicciotti, F., &#38; Burlando, P. (2018). Snow depth structure,
    fractal behavior, and interannual consistency over Haut Glacier d’Arolla, Switzerland.
    <i>Water Resources Research</i>. American Geophysical Union. <a href="https://doi.org/10.1029/2017wr021606">https://doi.org/10.1029/2017wr021606</a>
  chicago: Clemenzi, I., Francesca Pellicciotti, and P. Burlando. “Snow Depth Structure,
    Fractal Behavior, and Interannual Consistency over Haut Glacier d’Arolla, Switzerland.”
    <i>Water Resources Research</i>. American Geophysical Union, 2018. <a href="https://doi.org/10.1029/2017wr021606">https://doi.org/10.1029/2017wr021606</a>.
  ieee: I. Clemenzi, F. Pellicciotti, and P. Burlando, “Snow depth structure, fractal
    behavior, and interannual consistency over Haut Glacier d’Arolla, Switzerland,”
    <i>Water Resources Research</i>, vol. 54, no. 10. American Geophysical Union,
    pp. 7929–7945, 2018.
  ista: Clemenzi I, Pellicciotti F, Burlando P. 2018. Snow depth structure, fractal
    behavior, and interannual consistency over Haut Glacier d’Arolla, Switzerland.
    Water Resources Research. 54(10), 7929–7945.
  mla: Clemenzi, I., et al. “Snow Depth Structure, Fractal Behavior, and Interannual
    Consistency over Haut Glacier d’Arolla, Switzerland.” <i>Water Resources Research</i>,
    vol. 54, no. 10, American Geophysical Union, 2018, pp. 7929–45, doi:<a href="https://doi.org/10.1029/2017wr021606">10.1029/2017wr021606</a>.
  short: I. Clemenzi, F. Pellicciotti, P. Burlando, Water Resources Research 54 (2018)
    7929–7945.
date_created: 2023-02-20T08:13:31Z
date_published: 2018-06-07T00:00:00Z
date_updated: 2024-10-14T12:04:41Z
day: '07'
doi: 10.1029/2017wr021606
extern: '1'
intvolume: '        54'
issue: '10'
keyword:
- Water Science and Technology
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1029/2017WR021606
month: '06'
oa: 1
oa_version: Published Version
page: 7929-7945
publication: Water Resources Research
publication_identifier:
  eissn:
  - 1944-7973
  issn:
  - 0043-1397
publication_status: published
publisher: American Geophysical Union
quality_controlled: '1'
scopus_import: '1'
status: public
title: Snow depth structure, fractal behavior, and interannual consistency over Haut
  Glacier d'Arolla, Switzerland
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 54
year: '2018'
...
---
_id: '12606'
abstract:
- lang: eng
  text: Ice cliffs within a supraglacial debris cover have been identified as a source
    for high ablation relative to the surrounding debris-covered area. Due to their
    small relative size and steep orientation, ice cliffs are difficult to detect
    using nadir-looking space borne sensors. The method presented here uses surface
    slopes calculated from digital elevation model (DEM) data to map ice cliff geometry
    and produce an ice cliff probability map. Surface slope thresholds, which can
    be sensitive to geographic location and/or data quality, are selected automatically.
    The method also attempts to include area at the (often narrowing) ends of ice
    cliffs which could otherwise be neglected due to signal saturation in surface
    slope data. The method was calibrated in the eastern Alaska Range, Alaska, USA,
    against a control ice cliff dataset derived from high-resolution visible and thermal
    data. Using the same input parameter set that performed best in Alaska, the method
    was tested against ice cliffs manually mapped in the Khumbu Himal, Nepal. Our
    results suggest the method can accommodate different glaciological settings and
    different DEM data sources without a data intensive (high-resolution, multi-data
    source) recalibration.
article_processing_charge: No
article_type: original
author:
- first_name: Sam
  full_name: Herreid, Sam
  last_name: Herreid
- first_name: Francesca
  full_name: Pellicciotti, Francesca
  id: b28f055a-81ea-11ed-b70c-a9fe7f7b0e70
  last_name: Pellicciotti
citation:
  ama: Herreid S, Pellicciotti F. Automated detection of ice cliffs within supraglacial
    debris cover. <i>The Cryosphere</i>. 2018;12(5):1811-1829. doi:<a href="https://doi.org/10.5194/tc-12-1811-2018">10.5194/tc-12-1811-2018</a>
  apa: Herreid, S., &#38; Pellicciotti, F. (2018). Automated detection of ice cliffs
    within supraglacial debris cover. <i>The Cryosphere</i>. Copernicus Publications.
    <a href="https://doi.org/10.5194/tc-12-1811-2018">https://doi.org/10.5194/tc-12-1811-2018</a>
  chicago: Herreid, Sam, and Francesca Pellicciotti. “Automated Detection of Ice Cliffs
    within Supraglacial Debris Cover.” <i>The Cryosphere</i>. Copernicus Publications,
    2018. <a href="https://doi.org/10.5194/tc-12-1811-2018">https://doi.org/10.5194/tc-12-1811-2018</a>.
  ieee: S. Herreid and F. Pellicciotti, “Automated detection of ice cliffs within
    supraglacial debris cover,” <i>The Cryosphere</i>, vol. 12, no. 5. Copernicus
    Publications, pp. 1811–1829, 2018.
  ista: Herreid S, Pellicciotti F. 2018. Automated detection of ice cliffs within
    supraglacial debris cover. The Cryosphere. 12(5), 1811–1829.
  mla: Herreid, Sam, and Francesca Pellicciotti. “Automated Detection of Ice Cliffs
    within Supraglacial Debris Cover.” <i>The Cryosphere</i>, vol. 12, no. 5, Copernicus
    Publications, 2018, pp. 1811–29, doi:<a href="https://doi.org/10.5194/tc-12-1811-2018">10.5194/tc-12-1811-2018</a>.
  short: S. Herreid, F. Pellicciotti, The Cryosphere 12 (2018) 1811–1829.
date_created: 2023-02-20T08:13:36Z
date_published: 2018-05-31T00:00:00Z
date_updated: 2023-02-28T11:39:26Z
day: '31'
doi: 10.5194/tc-12-1811-2018
extern: '1'
intvolume: '        12'
issue: '5'
keyword:
- Earth-Surface Processes
- Water Science and Technology
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.5194/tc-12-1811-2018
month: '05'
oa: 1
oa_version: Published Version
page: 1811-1829
publication: The Cryosphere
publication_identifier:
  issn:
  - 1994-0424
publication_status: published
publisher: Copernicus Publications
quality_controlled: '1'
scopus_import: '1'
status: public
title: Automated detection of ice cliffs within supraglacial debris cover
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 12
year: '2018'
...
---
_id: '12607'
abstract:
- lang: eng
  text: Supraglacial ice cliffs exist on debris-covered glaciers worldwide, but despite
    their importance as melt hot spots, their life cycle is little understood. Early
    field observations had advanced a hypothesis of survival of north-facing and disappearance
    of south-facing cliffs, which is central for predicting the contribution of cliffs
    to total glacier mass losses. Their role as windows of energy transfer suggests
    they may explain the anomalously high mass losses of debris-covered glaciers in
    High Mountain Asia (HMA) despite the insulating debris, currently at the center
    of a debated controversy. We use a 3D model of cliff evolution coupled to very
    high-resolution topographic data to demonstrate that ice cliffs facing south (in
    the Northern Hemisphere) disappear within a few months due to enhanced solar radiation
    receipts and that aspect is the key control on cliffs evolution. We reproduce
    continuous flattening of south-facing cliffs, a result of their vertical gradient
    of incoming solar radiation and sky view factor. Our results establish that only
    north-facing cliffs are recurrent features and thus stable contributors to the
    melting of debris-covered glaciers. Satellite observations and mass balance modeling
    confirms that few south-facing cliffs of small size exist on the glaciers of Langtang,
    and their contribution to the glacier volume losses is very small (∼1%). This
    has major implications for the mass balance of HMA debris-covered glaciers as
    it provides the basis for new parameterizations of cliff evolution and distribution
    to constrain volume losses in a region where glaciers are highly relevant as water
    sources for millions of people.
article_processing_charge: No
article_type: original
author:
- first_name: Pascal
  full_name: Buri, Pascal
  last_name: Buri
- first_name: Francesca
  full_name: Pellicciotti, Francesca
  id: b28f055a-81ea-11ed-b70c-a9fe7f7b0e70
  last_name: Pellicciotti
citation:
  ama: Buri P, Pellicciotti F. Aspect controls the survival of ice cliffs on debris-covered
    glaciers. <i>PNAS</i>. 2018;115(17):4369-4374. doi:<a href="https://doi.org/10.1073/pnas.1713892115">10.1073/pnas.1713892115</a>
  apa: Buri, P., &#38; Pellicciotti, F. (2018). Aspect controls the survival of ice
    cliffs on debris-covered glaciers. <i>PNAS</i>. Proceedings of the National Academy
    of Sciences. <a href="https://doi.org/10.1073/pnas.1713892115">https://doi.org/10.1073/pnas.1713892115</a>
  chicago: Buri, Pascal, and Francesca Pellicciotti. “Aspect Controls the Survival
    of Ice Cliffs on Debris-Covered Glaciers.” <i>PNAS</i>. Proceedings of the National
    Academy of Sciences, 2018. <a href="https://doi.org/10.1073/pnas.1713892115">https://doi.org/10.1073/pnas.1713892115</a>.
  ieee: P. Buri and F. Pellicciotti, “Aspect controls the survival of ice cliffs on
    debris-covered glaciers,” <i>PNAS</i>, vol. 115, no. 17. Proceedings of the National
    Academy of Sciences, pp. 4369–4374, 2018.
  ista: Buri P, Pellicciotti F. 2018. Aspect controls the survival of ice cliffs on
    debris-covered glaciers. PNAS. 115(17), 4369–4374.
  mla: Buri, Pascal, and Francesca Pellicciotti. “Aspect Controls the Survival of
    Ice Cliffs on Debris-Covered Glaciers.” <i>PNAS</i>, vol. 115, no. 17, Proceedings
    of the National Academy of Sciences, 2018, pp. 4369–74, doi:<a href="https://doi.org/10.1073/pnas.1713892115">10.1073/pnas.1713892115</a>.
  short: P. Buri, F. Pellicciotti, PNAS 115 (2018) 4369–4374.
date_created: 2023-02-20T08:13:41Z
date_published: 2018-04-09T00:00:00Z
date_updated: 2023-02-28T11:35:18Z
day: '09'
doi: 10.1073/pnas.1713892115
extern: '1'
intvolume: '       115'
issue: '17'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1073/pnas.1713892115
month: '04'
oa: 1
oa_version: Published Version
page: 4369-4374
publication: PNAS
publication_identifier:
  eissn:
  - 1091-6490
  issn:
  - 0027-8424
publication_status: published
publisher: Proceedings of the National Academy of Sciences
quality_controlled: '1'
scopus_import: '1'
status: public
title: Aspect controls the survival of ice cliffs on debris-covered glaciers
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 115
year: '2018'
...
---
_id: '13055'
abstract:
- lang: eng
  text: "Dataset for manuscript 'Social network plasticity decreases disease transmission
    in a eusocial insect'\r\nCompared to previous versions: - raw image files added\r\n
    \                                                    - correction of URLs within
    README.txt file\r\n"
article_processing_charge: No
author:
- first_name: Nathalie
  full_name: Stroeymeyt, Nathalie
  last_name: Stroeymeyt
- first_name: Anna V
  full_name: Grasse, Anna V
  id: 406F989C-F248-11E8-B48F-1D18A9856A87
  last_name: Grasse
- first_name: Alessandro
  full_name: Crespi, Alessandro
  last_name: Crespi
- first_name: Danielle
  full_name: Mersch, Danielle
  last_name: Mersch
- first_name: Sylvia
  full_name: Cremer, Sylvia
  id: 2F64EC8C-F248-11E8-B48F-1D18A9856A87
  last_name: Cremer
  orcid: 0000-0002-2193-3868
- first_name: Laurent
  full_name: Keller, Laurent
  last_name: Keller
citation:
  ama: Stroeymeyt N, Grasse AV, Crespi A, Mersch D, Cremer S, Keller L. Social network
    plasticity decreases disease transmission in a eusocial insect. 2018. doi:<a href="https://doi.org/10.5281/ZENODO.1322669">10.5281/ZENODO.1322669</a>
  apa: Stroeymeyt, N., Grasse, A. V., Crespi, A., Mersch, D., Cremer, S., &#38; Keller,
    L. (2018). Social network plasticity decreases disease transmission in a eusocial
    insect. Zenodo. <a href="https://doi.org/10.5281/ZENODO.1322669">https://doi.org/10.5281/ZENODO.1322669</a>
  chicago: Stroeymeyt, Nathalie, Anna V Grasse, Alessandro Crespi, Danielle Mersch,
    Sylvia Cremer, and Laurent Keller. “Social Network Plasticity Decreases Disease
    Transmission in a Eusocial Insect.” Zenodo, 2018. <a href="https://doi.org/10.5281/ZENODO.1322669">https://doi.org/10.5281/ZENODO.1322669</a>.
  ieee: N. Stroeymeyt, A. V. Grasse, A. Crespi, D. Mersch, S. Cremer, and L. Keller,
    “Social network plasticity decreases disease transmission in a eusocial insect.”
    Zenodo, 2018.
  ista: Stroeymeyt N, Grasse AV, Crespi A, Mersch D, Cremer S, Keller L. 2018. Social
    network plasticity decreases disease transmission in a eusocial insect, Zenodo,
    <a href="https://doi.org/10.5281/ZENODO.1322669">10.5281/ZENODO.1322669</a>.
  mla: Stroeymeyt, Nathalie, et al. <i>Social Network Plasticity Decreases Disease
    Transmission in a Eusocial Insect</i>. Zenodo, 2018, doi:<a href="https://doi.org/10.5281/ZENODO.1322669">10.5281/ZENODO.1322669</a>.
  short: N. Stroeymeyt, A.V. Grasse, A. Crespi, D. Mersch, S. Cremer, L. Keller, (2018).
date_created: 2023-05-23T13:24:51Z
date_published: 2018-10-23T00:00:00Z
date_updated: 2026-06-18T19:15:22Z
day: '23'
ddc:
- '570'
department:
- _id: SyCr
doi: 10.5281/ZENODO.1322669
main_file_link:
- open_access: '1'
  url: https://doi.org/10.5281/zenodo.1480665
month: '10'
oa: 1
oa_version: Published Version
publisher: Zenodo
related_material:
  record:
  - id: '7'
    relation: used_in_publication
    status: public
status: public
title: Social network plasticity decreases disease transmission in a eusocial insect
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: research_data_reference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2018'
...
---
_id: '13059'
abstract:
- lang: eng
  text: "This dataset contains a GitHub repository containing all the data, analysis,
    Nextflow workflows and Jupyter notebooks to replicate the manuscript titled \"Fast
    and accurate large multiple sequence alignments with a root-to-leaf regressive
    method\".\r\nIt also contains the Multiple Sequence Alignments (MSAs) generated
    and well as the main figures and tables from the manuscript.\r\nThe repository
    is also available at GitHub (https://github.com/cbcrg/dpa-analysis) release `v1.2`.\r\nFor
    details on how to use the regressive alignment algorithm, see the T-Coffee software
    suite (https://github.com/cbcrg/tcoffee)."
article_processing_charge: No
author:
- first_name: Edgar
  full_name: Garriga, Edgar
  last_name: Garriga
- first_name: Paolo
  full_name: di Tommaso, Paolo
  last_name: di Tommaso
- first_name: Cedrik
  full_name: Magis, Cedrik
  last_name: Magis
- first_name: Ionas
  full_name: Erb, Ionas
  last_name: Erb
- first_name: Leila
  full_name: Mansouri, Leila
  last_name: Mansouri
- first_name: Athanasios
  full_name: Baltzis, Athanasios
  last_name: Baltzis
- first_name: Hafid
  full_name: Laayouni, Hafid
  last_name: Laayouni
- first_name: Fyodor
  full_name: Kondrashov, Fyodor
  id: 44FDEF62-F248-11E8-B48F-1D18A9856A87
  last_name: Kondrashov
  orcid: 0000-0001-8243-4694
- first_name: Evan
  full_name: Floden, Evan
  last_name: Floden
- first_name: Cedric
  full_name: Notredame, Cedric
  last_name: Notredame
citation:
  ama: Garriga E, di Tommaso P, Magis C, et al. Fast and accurate large multiple sequence
    alignments with a root-to-leaf regressive method. 2018. doi:<a href="https://doi.org/10.5281/ZENODO.2025846">10.5281/ZENODO.2025846</a>
  apa: Garriga, E., di Tommaso, P., Magis, C., Erb, I., Mansouri, L., Baltzis, A.,
    … Notredame, C. (2018). Fast and accurate large multiple sequence alignments with
    a root-to-leaf regressive method. Zenodo. <a href="https://doi.org/10.5281/ZENODO.2025846">https://doi.org/10.5281/ZENODO.2025846</a>
  chicago: Garriga, Edgar, Paolo di Tommaso, Cedrik Magis, Ionas Erb, Leila Mansouri,
    Athanasios Baltzis, Hafid Laayouni, Fyodor Kondrashov, Evan Floden, and Cedric
    Notredame. “Fast and Accurate Large Multiple Sequence Alignments with a Root-to-Leaf
    Regressive Method.” Zenodo, 2018. <a href="https://doi.org/10.5281/ZENODO.2025846">https://doi.org/10.5281/ZENODO.2025846</a>.
  ieee: E. Garriga <i>et al.</i>, “Fast and accurate large multiple sequence alignments
    with a root-to-leaf regressive method.” Zenodo, 2018.
  ista: Garriga E, di Tommaso P, Magis C, Erb I, Mansouri L, Baltzis A, Laayouni H,
    Kondrashov F, Floden E, Notredame C. 2018. Fast and accurate large multiple sequence
    alignments with a root-to-leaf regressive method, Zenodo, <a href="https://doi.org/10.5281/ZENODO.2025846">10.5281/ZENODO.2025846</a>.
  mla: Garriga, Edgar, et al. <i>Fast and Accurate Large Multiple Sequence Alignments
    with a Root-to-Leaf Regressive Method</i>. Zenodo, 2018, doi:<a href="https://doi.org/10.5281/ZENODO.2025846">10.5281/ZENODO.2025846</a>.
  short: E. Garriga, P. di Tommaso, C. Magis, I. Erb, L. Mansouri, A. Baltzis, H.
    Laayouni, F. Kondrashov, E. Floden, C. Notredame, (2018).
date_created: 2023-05-23T16:08:20Z
date_published: 2018-12-07T00:00:00Z
date_updated: 2025-07-10T11:54:19Z
day: '07'
ddc:
- '570'
department:
- _id: FyKo
doi: 10.5281/ZENODO.2025846
main_file_link:
- open_access: '1'
  url: https://doi.org/10.5281/zenodo.3271452
month: '12'
oa: 1
oa_version: Published Version
publisher: Zenodo
related_material:
  record:
  - id: '7181'
    relation: used_in_publication
    status: public
status: public
title: Fast and accurate large multiple sequence alignments with a root-to-leaf regressive
  method
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: research_data_reference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2018'
...
---
_id: '132'
abstract:
- lang: eng
  text: Pancreas development involves a coordinated process in which an early phase
    of cell segregation is followed by a longer phase of lineage restriction, expansion,
    and tissue remodeling. By combining clonal tracing and whole-mount reconstruction
    with proliferation kinetics and single-cell transcriptional profiling, we define
    the functional basis of pancreas morphogenesis. We show that the large-scale organization
    of mouse pancreas can be traced to the activity of self-renewing precursors positioned
    at the termini of growing ducts, which act collectively to drive serial rounds
    of stochastic ductal bifurcation balanced by termination. During this phase of
    branching morphogenesis, multipotent precursors become progressively fate-restricted,
    giving rise to self-renewing acinar-committed precursors that are conveyed with
    growing ducts, as well as ductal progenitors that expand the trailing ducts and
    give rise to delaminating endocrine cells. These findings define quantitatively
    how the functional behavior and lineage progression of precursor pools determine
    the large-scale patterning of pancreatic sub-compartments.
acknowledgement: E.H. is funded by a Junior Research Fellowship from Trinity College,
  Cam-bridge, a Sir Henry Wellcome Fellowship from the Wellcome Trust, and theBettencourt-Schueller
  Young Researcher Prize for support.
article_processing_charge: No
article_type: original
author:
- first_name: Magdalena
  full_name: Sznurkowska, Magdalena
  last_name: Sznurkowska
- first_name: Edouard B
  full_name: Hannezo, Edouard B
  id: 3A9DB764-F248-11E8-B48F-1D18A9856A87
  last_name: Hannezo
  orcid: 0000-0001-6005-1561
- first_name: Roberta
  full_name: Azzarelli, Roberta
  last_name: Azzarelli
- first_name: Steffen
  full_name: Rulands, Steffen
  last_name: Rulands
- first_name: Sonia
  full_name: Nestorowa, Sonia
  last_name: Nestorowa
- first_name: Christopher
  full_name: Hindley, Christopher
  last_name: Hindley
- first_name: Jennifer
  full_name: Nichols, Jennifer
  last_name: Nichols
- first_name: Berthold
  full_name: Göttgens, Berthold
  last_name: Göttgens
- first_name: Meritxell
  full_name: Huch, Meritxell
  last_name: Huch
- first_name: Anna
  full_name: Philpott, Anna
  last_name: Philpott
- first_name: Benjamin
  full_name: Simons, Benjamin
  last_name: Simons
citation:
  ama: Sznurkowska M, Hannezo EB, Azzarelli R, et al. Defining lineage potential and
    fate behavior of precursors during pancreas development. <i>Developmental Cell</i>.
    2018;46(3):360-375. doi:<a href="https://doi.org/10.1016/j.devcel.2018.06.028">10.1016/j.devcel.2018.06.028</a>
  apa: Sznurkowska, M., Hannezo, E. B., Azzarelli, R., Rulands, S., Nestorowa, S.,
    Hindley, C., … Simons, B. (2018). Defining lineage potential and fate behavior
    of precursors during pancreas development. <i>Developmental Cell</i>. Cell Press.
    <a href="https://doi.org/10.1016/j.devcel.2018.06.028">https://doi.org/10.1016/j.devcel.2018.06.028</a>
  chicago: Sznurkowska, Magdalena, Edouard B Hannezo, Roberta Azzarelli, Steffen Rulands,
    Sonia Nestorowa, Christopher Hindley, Jennifer Nichols, et al. “Defining Lineage
    Potential and Fate Behavior of Precursors during Pancreas Development.” <i>Developmental
    Cell</i>. Cell Press, 2018. <a href="https://doi.org/10.1016/j.devcel.2018.06.028">https://doi.org/10.1016/j.devcel.2018.06.028</a>.
  ieee: M. Sznurkowska <i>et al.</i>, “Defining lineage potential and fate behavior
    of precursors during pancreas development,” <i>Developmental Cell</i>, vol. 46,
    no. 3. Cell Press, pp. 360–375, 2018.
  ista: Sznurkowska M, Hannezo EB, Azzarelli R, Rulands S, Nestorowa S, Hindley C,
    Nichols J, Göttgens B, Huch M, Philpott A, Simons B. 2018. Defining lineage potential
    and fate behavior of precursors during pancreas development. Developmental Cell.
    46(3), 360–375.
  mla: Sznurkowska, Magdalena, et al. “Defining Lineage Potential and Fate Behavior
    of Precursors during Pancreas Development.” <i>Developmental Cell</i>, vol. 46,
    no. 3, Cell Press, 2018, pp. 360–75, doi:<a href="https://doi.org/10.1016/j.devcel.2018.06.028">10.1016/j.devcel.2018.06.028</a>.
  short: M. Sznurkowska, E.B. Hannezo, R. Azzarelli, S. Rulands, S. Nestorowa, C.
    Hindley, J. Nichols, B. Göttgens, M. Huch, A. Philpott, B. Simons, Developmental
    Cell 46 (2018) 360–375.
date_created: 2018-12-11T11:44:48Z
date_published: 2018-08-06T00:00:00Z
date_updated: 2023-09-11T12:52:41Z
day: '06'
ddc:
- '570'
department:
- _id: EdHa
doi: 10.1016/j.devcel.2018.06.028
external_id:
  isi:
  - '000441327300012'
file:
- access_level: open_access
  checksum: 78d2062b9e3c3b90fe71545aeb6d2f65
  content_type: application/pdf
  creator: dernst
  date_created: 2018-12-17T10:49:49Z
  date_updated: 2020-07-14T12:44:43Z
  file_id: '5694'
  file_name: 2018_DevelopmentalCell_Sznurkowska.pdf
  file_size: 8948384
  relation: main_file
file_date_updated: 2020-07-14T12:44:43Z
has_accepted_license: '1'
intvolume: '        46'
isi: 1
issue: '3'
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
page: 360 - 375
publication: Developmental Cell
publication_status: published
publisher: Cell Press
publist_id: '7791'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Defining lineage potential and fate behavior of precursors during pancreas
  development
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 46
year: '2018'
...
---
OA_place: publisher
OA_type: gold
_id: '133'
abstract:
- lang: eng
  text: Synchronous programs are easy to specify because the side effects of an operation
    are finished by the time the invocation of the operation returns to the caller.
    Asynchronous programs, on the other hand, are difficult to specify because there
    are side effects due to pending computation scheduled as a result of the invocation
    of an operation. They are also difficult to verify because of the large number
    of possible interleavings of concurrent computation threads. We present synchronization,
    a new proof rule that simplifies the verification of asynchronous programs by
    introducing the fiction, for proof purposes, that asynchronous operations complete
    synchronously. Synchronization summarizes an asynchronous computation as immediate
    atomic effect. Modular verification is enabled via pending asynchronous calls
    in atomic summaries, and a complementary proof rule that eliminates pending asynchronous
    calls when components and their specifications are composed. We evaluate synchronization
    in the context of a multi-layer refinement verification methodology on a collection
    of benchmark programs.
alternative_title:
- LIPIcs
article_number: '21'
article_processing_charge: No
author:
- first_name: Bernhard
  full_name: Kragl, Bernhard
  id: 320FC952-F248-11E8-B48F-1D18A9856A87
  last_name: Kragl
  orcid: 0000-0001-7745-9117
- first_name: Shaz
  full_name: Qadeer, Shaz
  last_name: Qadeer
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
citation:
  ama: 'Kragl B, Qadeer S, Henzinger TA. Synchronizing the asynchronous. In: Vol 118.
    Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2018. doi:<a href="https://doi.org/10.4230/LIPIcs.CONCUR.2018.21">10.4230/LIPIcs.CONCUR.2018.21</a>'
  apa: 'Kragl, B., Qadeer, S., &#38; Henzinger, T. A. (2018). Synchronizing the asynchronous
    (Vol. 118). Presented at the CONCUR: International Conference on Concurrency Theory,
    Beijing, China: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href="https://doi.org/10.4230/LIPIcs.CONCUR.2018.21">https://doi.org/10.4230/LIPIcs.CONCUR.2018.21</a>'
  chicago: Kragl, Bernhard, Shaz Qadeer, and Thomas A Henzinger. “Synchronizing the
    Asynchronous,” Vol. 118. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2018.
    <a href="https://doi.org/10.4230/LIPIcs.CONCUR.2018.21">https://doi.org/10.4230/LIPIcs.CONCUR.2018.21</a>.
  ieee: 'B. Kragl, S. Qadeer, and T. A. Henzinger, “Synchronizing the asynchronous,”
    presented at the CONCUR: International Conference on Concurrency Theory, Beijing,
    China, 2018, vol. 118.'
  ista: 'Kragl B, Qadeer S, Henzinger TA. 2018. Synchronizing the asynchronous. CONCUR:
    International Conference on Concurrency Theory, LIPIcs, vol. 118, 21.'
  mla: Kragl, Bernhard, et al. <i>Synchronizing the Asynchronous</i>. Vol. 118, 21,
    Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2018, doi:<a href="https://doi.org/10.4230/LIPIcs.CONCUR.2018.21">10.4230/LIPIcs.CONCUR.2018.21</a>.
  short: B. Kragl, S. Qadeer, T.A. Henzinger, in:, Schloss Dagstuhl - Leibniz-Zentrum
    für Informatik, 2018.
conference:
  end_date: 2018-09-07
  location: Beijing, China
  name: 'CONCUR: International Conference on Concurrency Theory'
  start_date: 2018-09-04
date_created: 2018-12-11T11:44:48Z
date_published: 2018-08-13T00:00:00Z
date_updated: 2026-04-08T07:23:52Z
day: '13'
ddc:
- '000'
department:
- _id: ToHe
doi: 10.4230/LIPIcs.CONCUR.2018.21
extern: '1'
file:
- access_level: open_access
  checksum: c90895f4c5fafc18ddc54d1c8848077e
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:18:46Z
  date_updated: 2020-07-14T12:44:44Z
  file_id: '5368'
  file_name: IST-2018-853-v2+2_concur2018.pdf
  file_size: 745438
  relation: main_file
file_date_updated: 2020-07-14T12:44:44Z
has_accepted_license: '1'
intvolume: '       118'
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
project:
- _id: 25F2ACDE-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S11402-N23
  name: Rigorous Systems Engineering
- _id: 25F5A88A-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S11402-N23
  name: Moderne Concurrency Paradigms
publication_identifier:
  issn:
  - 1868-8969
publication_status: published
publisher: Schloss Dagstuhl - Leibniz-Zentrum für Informatik
publist_id: '7790'
pubrep_id: '1039'
quality_controlled: '1'
related_material:
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    relation: earlier_version
    status: public
  - id: '8332'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: Synchronizing the asynchronous
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 118
year: '2018'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
_id: '21096'
abstract:
- lang: eng
  text: 'By using a combination of readily accessible experimental and computational
    experiments in water, we explored the factors governing the association between
    polyanionic dyn[4]arene and a series of α,ω-alkyldiammonium ions of increasing
    chain length. We found that the lock-and-key concept based on the best match between
    the apolar and polar regions of the molecular partners failed to explain the observed
    selectivities. Instead, the dissection of the energetic and structural contributions
    demonstrated that the binding events were actually guided by two crucial solvent-related
    phenomena as the chain length of the guest increases: the expected decrease of
    the enthalpic cost of guest desolvation and the unexpected increase of the favourable
    enthalpy of complex solvation. By bringing to light the decisive enthalpic impact
    of complex solvation during the binding of polyelectrolytes by inclusion, this
    study may provide a missing piece to a puzzle that one day could display the global
    picture of molecular recognition in water.'
article_processing_charge: No
article_type: original
author:
- first_name: Emeric
  full_name: Jeamet, Emeric
  last_name: Jeamet
- first_name: Jean
  full_name: Septavaux, Jean
  last_name: Septavaux
- first_name: Alexandre
  full_name: Héloin, Alexandre
  last_name: Héloin
- first_name: Marion
  full_name: Donnier-Maréchal, Marion
  last_name: Donnier-Maréchal
- first_name: Melissa
  full_name: Dumartin, Melissa
  last_name: Dumartin
- first_name: Benjamin
  full_name: Ourri, Benjamin
  last_name: Ourri
- first_name: Pradeep K
  full_name: Mandal, Pradeep K
  id: 6a3def15-d4b4-11ef-9fa9-a24c1f545ec3
  last_name: Mandal
  orcid: 0000-0001-5996-956X
- first_name: Ivan
  full_name: Huc, Ivan
  last_name: Huc
- first_name: Emmanuelle
  full_name: Bignon, Emmanuelle
  last_name: Bignon
- first_name: Elise
  full_name: Dumont, Elise
  last_name: Dumont
- first_name: Christophe
  full_name: Morell, Christophe
  last_name: Morell
- first_name: Jean-Patrick
  full_name: Francoia, Jean-Patrick
  last_name: Francoia
- first_name: Florent
  full_name: Perret, Florent
  last_name: Perret
- first_name: Laurent
  full_name: Vial, Laurent
  last_name: Vial
- first_name: Julien
  full_name: Leclaire, Julien
  last_name: Leclaire
citation:
  ama: Jeamet E, Septavaux J, Héloin A, et al. Wetting the lock and key enthalpically
    favours polyelectrolyte binding. <i>Chemical Science</i>. 2018;10(1):277-283.
    doi:<a href="https://doi.org/10.1039/c8sc02966k">10.1039/c8sc02966k</a>
  apa: Jeamet, E., Septavaux, J., Héloin, A., Donnier-Maréchal, M., Dumartin, M.,
    Ourri, B., … Leclaire, J. (2018). Wetting the lock and key enthalpically favours
    polyelectrolyte binding. <i>Chemical Science</i>. Royal Society of Chemistry.
    <a href="https://doi.org/10.1039/c8sc02966k">https://doi.org/10.1039/c8sc02966k</a>
  chicago: Jeamet, Emeric, Jean Septavaux, Alexandre Héloin, Marion Donnier-Maréchal,
    Melissa Dumartin, Benjamin Ourri, Pradeep K Mandal, et al. “Wetting the Lock and
    Key Enthalpically Favours Polyelectrolyte Binding.” <i>Chemical Science</i>. Royal
    Society of Chemistry, 2018. <a href="https://doi.org/10.1039/c8sc02966k">https://doi.org/10.1039/c8sc02966k</a>.
  ieee: E. Jeamet <i>et al.</i>, “Wetting the lock and key enthalpically favours polyelectrolyte
    binding,” <i>Chemical Science</i>, vol. 10, no. 1. Royal Society of Chemistry,
    pp. 277–283, 2018.
  ista: Jeamet E, Septavaux J, Héloin A, Donnier-Maréchal M, Dumartin M, Ourri B,
    Mandal PK, Huc I, Bignon E, Dumont E, Morell C, Francoia J-P, Perret F, Vial L,
    Leclaire J. 2018. Wetting the lock and key enthalpically favours polyelectrolyte
    binding. Chemical Science. 10(1), 277–283.
  mla: Jeamet, Emeric, et al. “Wetting the Lock and Key Enthalpically Favours Polyelectrolyte
    Binding.” <i>Chemical Science</i>, vol. 10, no. 1, Royal Society of Chemistry,
    2018, pp. 277–83, doi:<a href="https://doi.org/10.1039/c8sc02966k">10.1039/c8sc02966k</a>.
  short: E. Jeamet, J. Septavaux, A. Héloin, M. Donnier-Maréchal, M. Dumartin, B.
    Ourri, P.K. Mandal, I. Huc, E. Bignon, E. Dumont, C. Morell, J.-P. Francoia, F.
    Perret, L. Vial, J. Leclaire, Chemical Science 10 (2018) 277–283.
date_created: 2026-01-29T21:20:24Z
date_published: 2018-10-08T00:00:00Z
date_updated: 2026-02-23T10:00:16Z
day: '08'
doi: 10.1039/c8sc02966k
extern: '1'
has_accepted_license: '1'
intvolume: '        10'
issue: '1'
language:
- iso: eng
license: https://creativecommons.org/licenses/by-nc/3.0/
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1039/C8SC02966K
month: '10'
oa: 1
oa_version: Published Version
page: 277-283
publication: Chemical Science
publication_identifier:
  eissn:
  - 2041-6539
  issn:
  - 2041-6520
publication_status: published
publisher: Royal Society of Chemistry
quality_controlled: '1'
status: public
title: Wetting the lock and key enthalpically favours polyelectrolyte binding
tmp:
  image: /images/cc_by_nc.png
  legal_code_url: https://creativecommons.org/licenses/by-nc/3.0/legalcode
  name: Creative Commons Attribution-NonCommercial 3.0 Unported (CC BY-NC 3.0)
  short: CC BY-NC (3.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 10
year: '2018'
...
---
OA_place: repository
OA_type: green
_id: '21533'
abstract:
- lang: eng
  text: Recent advances in the fabrication of nanostructures and nanoscale features
    in metasurfaces offer new prospects for generating visible light emission from
    low-energy electrons. Here we present the experimental observation of visible
    light emission from low-energy free electrons interacting with nanoscale periodic
    surfaces through the Smith–Purcell (SP) effect. We demonstrate SP light emission
    from nanoscale gratings with periodicity as small as 50 nm, enabling the observation
    of tunable visible radiation from low-energy electrons (1.5 to 6 keV), an order
    of magnitude lower in energy than previously reported. We study the emission wavelength
    and intensity dependence on the grating pitch and electron energy, showing agreement
    between experiment and theory. Our results open the way to the production of SP-based
    nanophotonics integrated devices. Built inside electron microscopes, SP sources
    could enable the development of novel electron–optical correlated spectroscopic
    techniques and facilitate the observation of new quantum effects in light sources.
article_processing_charge: No
article_type: letter_note
arxiv: 1
author:
- first_name: Aviram
  full_name: Massuda, Aviram
  last_name: Massuda
- first_name: Charles
  full_name: Roques-Carmes, Charles
  id: e2e68fc9-6505-11ef-a541-eb4e72cc3e82
  last_name: Roques-Carmes
- first_name: Yujia
  full_name: Yang, Yujia
  last_name: Yang
- first_name: Steven E.
  full_name: Kooi, Steven E.
  last_name: Kooi
- first_name: Yi
  full_name: Yang, Yi
  last_name: Yang
- first_name: Chitraang
  full_name: Murdia, Chitraang
  last_name: Murdia
- first_name: Karl K.
  full_name: Berggren, Karl K.
  last_name: Berggren
- first_name: Ido
  full_name: Kaminer, Ido
  last_name: Kaminer
- first_name: Marin
  full_name: Soljačić, Marin
  last_name: Soljačić
citation:
  ama: Massuda A, Roques-Carmes C, Yang Y, et al. Smith–Purcell radiation from low-energy
    electrons. <i>ACS Photonics</i>. 2018;5(9):3513-3518. doi:<a href="https://doi.org/10.1021/acsphotonics.8b00743">10.1021/acsphotonics.8b00743</a>
  apa: Massuda, A., Roques-Carmes, C., Yang, Y., Kooi, S. E., Yang, Y., Murdia, C.,
    … Soljačić, M. (2018). Smith–Purcell radiation from low-energy electrons. <i>ACS
    Photonics</i>. American Chemical Society . <a href="https://doi.org/10.1021/acsphotonics.8b00743">https://doi.org/10.1021/acsphotonics.8b00743</a>
  chicago: Massuda, Aviram, Charles Roques-Carmes, Yujia Yang, Steven E. Kooi, Yi
    Yang, Chitraang Murdia, Karl K. Berggren, Ido Kaminer, and Marin Soljačić. “Smith–Purcell
    Radiation from Low-Energy Electrons.” <i>ACS Photonics</i>. American Chemical
    Society , 2018. <a href="https://doi.org/10.1021/acsphotonics.8b00743">https://doi.org/10.1021/acsphotonics.8b00743</a>.
  ieee: A. Massuda <i>et al.</i>, “Smith–Purcell radiation from low-energy electrons,”
    <i>ACS Photonics</i>, vol. 5, no. 9. American Chemical Society , pp. 3513–3518,
    2018.
  ista: Massuda A, Roques-Carmes C, Yang Y, Kooi SE, Yang Y, Murdia C, Berggren KK,
    Kaminer I, Soljačić M. 2018. Smith–Purcell radiation from low-energy electrons.
    ACS Photonics. 5(9), 3513–3518.
  mla: Massuda, Aviram, et al. “Smith–Purcell Radiation from Low-Energy Electrons.”
    <i>ACS Photonics</i>, vol. 5, no. 9, American Chemical Society , 2018, pp. 3513–18,
    doi:<a href="https://doi.org/10.1021/acsphotonics.8b00743">10.1021/acsphotonics.8b00743</a>.
  short: A. Massuda, C. Roques-Carmes, Y. Yang, S.E. Kooi, Y. Yang, C. Murdia, K.K.
    Berggren, I. Kaminer, M. Soljačić, ACS Photonics 5 (2018) 3513–3518.
date_created: 2026-03-30T12:22:47Z
date_published: 2018-08-30T00:00:00Z
date_updated: 2026-04-15T11:48:45Z
day: '30'
ddc:
- '530'
doi: 10.1021/acsphotonics.8b00743
extern: '1'
external_id:
  arxiv:
  - '1710.05358'
intvolume: '         5'
issue: '9'
keyword:
- light−matter interactions
- periodic structures
- nanophotonics
- free-electron light sources
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.1710.05358
month: '08'
oa: 1
oa_version: Preprint
page: 3513-3518
publication: ACS Photonics
publication_identifier:
  eissn:
  - 2330-4022
publication_status: published
publisher: 'American Chemical Society '
quality_controlled: '1'
scopus_import: '1'
status: public
title: Smith–Purcell radiation from low-energy electrons
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 5
year: '2018'
...
---
OA_place: repository
OA_type: green
_id: '21545'
abstract:
- lang: eng
  text: Free-electron radiation such as Cerenkov1, Smith–Purcell2 and transition radiation3,4
    can be greatly affected by structured optical environments, as has been demonstrated
    in a variety of polaritonic5,6, photonic-crystal7 and metamaterial8,9,10 systems.
    However, the amount of radiation that can ultimately be extracted from free electrons
    near an arbitrary material structure has remained elusive. Here we derive a fundamental
    upper limit to the spontaneous photon emission and energy loss of free electrons,
    regardless of geometry, which illuminates the effects of material properties and
    electron velocities. We obtain experimental evidence for our theory with quantitative
    measurements of Smith–Purcell radiation. Our framework allows us to make two predictions.
    One is a new regime of radiation operation—at subwavelength separations, slower
    (non-relativistic) electrons can achieve stronger radiation than fast (relativistic)
    electrons. The other is a divergence of the emission probability in the limit
    of lossless materials. We further reveal that such divergences can be approached
    by coupling free electrons to photonic bound states in the continuum11,12,13.
    Our findings suggest that compact and efficient free-electron radiation sources
    from microwaves to the soft X-ray regime may be achievable without requiring ultrahigh
    accelerating voltages.
article_processing_charge: No
article_type: letter_note
arxiv: 1
author:
- first_name: Yi
  full_name: Yang, Yi
  last_name: Yang
- first_name: Aviram
  full_name: Massuda, Aviram
  last_name: Massuda
- first_name: Charles
  full_name: Roques-Carmes, Charles
  id: e2e68fc9-6505-11ef-a541-eb4e72cc3e82
  last_name: Roques-Carmes
- first_name: Steven E.
  full_name: Kooi, Steven E.
  last_name: Kooi
- first_name: Thomas
  full_name: Christensen, Thomas
  last_name: Christensen
- first_name: Steven G.
  full_name: Johnson, Steven G.
  last_name: Johnson
- first_name: John D.
  full_name: Joannopoulos, John D.
  last_name: Joannopoulos
- first_name: Owen D.
  full_name: Miller, Owen D.
  last_name: Miller
- first_name: Ido
  full_name: Kaminer, Ido
  last_name: Kaminer
- first_name: Marin
  full_name: Soljačić, Marin
  last_name: Soljačić
citation:
  ama: Yang Y, Massuda A, Roques-Carmes C, et al. Maximal spontaneous photon emission
    and energy loss from free electrons. <i>Nature Physics</i>. 2018;14:894-899. doi:<a
    href="https://doi.org/10.1038/s41567-018-0180-2">10.1038/s41567-018-0180-2</a>
  apa: Yang, Y., Massuda, A., Roques-Carmes, C., Kooi, S. E., Christensen, T., Johnson,
    S. G., … Soljačić, M. (2018). Maximal spontaneous photon emission and energy loss
    from free electrons. <i>Nature Physics</i>. Springer Nature. <a href="https://doi.org/10.1038/s41567-018-0180-2">https://doi.org/10.1038/s41567-018-0180-2</a>
  chicago: Yang, Yi, Aviram Massuda, Charles Roques-Carmes, Steven E. Kooi, Thomas
    Christensen, Steven G. Johnson, John D. Joannopoulos, Owen D. Miller, Ido Kaminer,
    and Marin Soljačić. “Maximal Spontaneous Photon Emission and Energy Loss from
    Free Electrons.” <i>Nature Physics</i>. Springer Nature, 2018. <a href="https://doi.org/10.1038/s41567-018-0180-2">https://doi.org/10.1038/s41567-018-0180-2</a>.
  ieee: Y. Yang <i>et al.</i>, “Maximal spontaneous photon emission and energy loss
    from free electrons,” <i>Nature Physics</i>, vol. 14. Springer Nature, pp. 894–899,
    2018.
  ista: Yang Y, Massuda A, Roques-Carmes C, Kooi SE, Christensen T, Johnson SG, Joannopoulos
    JD, Miller OD, Kaminer I, Soljačić M. 2018. Maximal spontaneous photon emission
    and energy loss from free electrons. Nature Physics. 14, 894–899.
  mla: Yang, Yi, et al. “Maximal Spontaneous Photon Emission and Energy Loss from
    Free Electrons.” <i>Nature Physics</i>, vol. 14, Springer Nature, 2018, pp. 894–99,
    doi:<a href="https://doi.org/10.1038/s41567-018-0180-2">10.1038/s41567-018-0180-2</a>.
  short: Y. Yang, A. Massuda, C. Roques-Carmes, S.E. Kooi, T. Christensen, S.G. Johnson,
    J.D. Joannopoulos, O.D. Miller, I. Kaminer, M. Soljačić, Nature Physics 14 (2018)
    894–899.
date_created: 2026-03-30T12:22:47Z
date_published: 2018-09-01T00:00:00Z
date_updated: 2026-04-15T12:22:56Z
day: '01'
doi: 10.1038/s41567-018-0180-2
extern: '1'
external_id:
  arxiv:
  - '1901.06593'
intvolume: '        14'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.1901.06593
month: '09'
oa: 1
oa_version: Preprint
page: 894-899
publication: Nature Physics
publication_identifier:
  eissn:
  - 1745-2481
  issn:
  - 1745-2473
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
  link:
  - relation: erratum
    url: https://doi.org/10.1038/s41567-018-0252-3
scopus_import: '1'
status: public
title: Maximal spontaneous photon emission and energy loss from free electrons
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 14
year: '2018'
...
