---
_id: '711'
abstract:
- lang: eng
  text: Nested weighted automata (NWA) present a robust and convenient automata-theoretic
    formalism for quantitative specifications. Previous works have considered NWA
    that processed input words only in the forward direction. It is natural to allow
    the automata to process input words backwards as well, for example, to measure
    the maximal or average time between a response and the preceding request. We therefore
    introduce and study bidirectional NWA that can process input words in both directions.
    First, we show that bidirectional NWA can express interesting quantitative properties
    that are not expressible by forward-only NWA. Second, for the fundamental decision
    problems of emptiness and universality, we establish decidability and complexity
    results for the new framework which match the best-known results for the special
    case of forward-only NWA. Thus, for NWA, the increased expressiveness of bidirectionality
    is achieved at no additional computational complexity. This is in stark contrast
    to the unweighted case, where bidirectional finite automata are no more expressive
    but exponentially more succinct than their forward-only counterparts.
alternative_title:
- LIPIcs
article_number: '5'
article_processing_charge: No
author:
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
- first_name: Jan
  full_name: Otop, Jan
  id: 2FC5DA74-F248-11E8-B48F-1D18A9856A87
  last_name: Otop
citation:
  ama: 'Chatterjee K, Henzinger TA, Otop J. Bidirectional nested weighted automata.
    In: Vol 85. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2017. doi:<a href="https://doi.org/10.4230/LIPIcs.CONCUR.2017.5">10.4230/LIPIcs.CONCUR.2017.5</a>'
  apa: 'Chatterjee, K., Henzinger, T. A., &#38; Otop, J. (2017). Bidirectional nested
    weighted automata (Vol. 85). Presented at the 28th International Conference on
    Concurrency Theory, CONCUR, Berlin, Germany: Schloss Dagstuhl - Leibniz-Zentrum
    für Informatik. <a href="https://doi.org/10.4230/LIPIcs.CONCUR.2017.5">https://doi.org/10.4230/LIPIcs.CONCUR.2017.5</a>'
  chicago: Chatterjee, Krishnendu, Thomas A Henzinger, and Jan Otop. “Bidirectional
    Nested Weighted Automata,” Vol. 85. Schloss Dagstuhl - Leibniz-Zentrum für Informatik,
    2017. <a href="https://doi.org/10.4230/LIPIcs.CONCUR.2017.5">https://doi.org/10.4230/LIPIcs.CONCUR.2017.5</a>.
  ieee: K. Chatterjee, T. A. Henzinger, and J. Otop, “Bidirectional nested weighted
    automata,” presented at the 28th International Conference on Concurrency Theory,
    CONCUR, Berlin, Germany, 2017, vol. 85.
  ista: Chatterjee K, Henzinger TA, Otop J. 2017. Bidirectional nested weighted automata.
    28th International Conference on Concurrency Theory, CONCUR, LIPIcs, vol. 85,
    5.
  mla: Chatterjee, Krishnendu, et al. <i>Bidirectional Nested Weighted Automata</i>.
    Vol. 85, 5, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017, doi:<a href="https://doi.org/10.4230/LIPIcs.CONCUR.2017.5">10.4230/LIPIcs.CONCUR.2017.5</a>.
  short: K. Chatterjee, T.A. Henzinger, J. Otop, in:, Schloss Dagstuhl - Leibniz-Zentrum
    für Informatik, 2017.
conference:
  end_date: 2017-09-08
  location: Berlin, Germany
  name: 28th International Conference on Concurrency Theory, CONCUR
  start_date: 2017-09-05
corr_author: '1'
date_created: 2018-12-11T11:48:04Z
date_published: 2017-08-01T00:00:00Z
date_updated: 2025-07-10T11:54:15Z
day: '01'
ddc:
- '004'
- '005'
department:
- _id: KrCh
- _id: ToHe
doi: 10.4230/LIPIcs.CONCUR.2017.5
file:
- access_level: open_access
  checksum: d2bda4783821a6358333fe27f11f4737
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:08:02Z
  date_updated: 2020-07-14T12:47:49Z
  file_id: '4661'
  file_name: IST-2017-886-v1+1_LIPIcs-CONCUR-2017-5.pdf
  file_size: 570294
  relation: main_file
file_date_updated: 2020-07-14T12:47:49Z
fulldoi: https://doi.org/10.4230/LIPIcs.CONCUR.2017.5
has_accepted_license: '1'
intvolume: '        85'
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
publication_identifier:
  issn:
  - 1868-8969
publication_status: published
publisher: Schloss Dagstuhl - Leibniz-Zentrum für Informatik
publist_id: '6976'
pubrep_id: '886'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Bidirectional nested weighted automata
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 85
year: '2017'
...
---
_id: '712'
abstract:
- lang: eng
  text: 'We establish a weak–strong uniqueness principle for solutions to entropy-dissipating
    reaction–diffusion equations: As long as a strong solution to the reaction–diffusion
    equation exists, any weak solution and even any renormalized solution must coincide
    with this strong solution. Our assumptions on the reaction rates are just the
    entropy condition and local Lipschitz continuity; in particular, we do not impose
    any growth restrictions on the reaction rates. Therefore, our result applies to
    any single reversible reaction with mass-action kinetics as well as to systems
    of reversible reactions with mass-action kinetics satisfying the detailed balance
    condition. Renormalized solutions are known to exist globally in time for reaction–diffusion
    equations with entropy-dissipating reaction rates; in contrast, the global-in-time
    existence of weak solutions is in general still an open problem–even for smooth
    data–, thereby motivating the study of renormalized solutions. The key ingredient
    of our result is a careful adjustment of the usual relative entropy functional,
    whose evolution cannot be controlled properly for weak solutions or renormalized
    solutions.'
article_processing_charge: No
arxiv: 1
author:
- first_name: Julian L
  full_name: Fischer, Julian L
  id: 2C12A0B0-F248-11E8-B48F-1D18A9856A87
  last_name: Fischer
  orcid: 0000-0002-0479-558X
citation:
  ama: 'Fischer JL. Weak–strong uniqueness of solutions to entropy dissipating reaction–diffusion
    equations. <i>Nonlinear Analysis: Theory, Methods and Applications</i>. 2017;159:181-207.
    doi:<a href="https://doi.org/10.1016/j.na.2017.03.001">10.1016/j.na.2017.03.001</a>'
  apa: 'Fischer, J. L. (2017). Weak–strong uniqueness of solutions to entropy dissipating
    reaction–diffusion equations. <i>Nonlinear Analysis: Theory, Methods and Applications</i>.
    Elsevier. <a href="https://doi.org/10.1016/j.na.2017.03.001">https://doi.org/10.1016/j.na.2017.03.001</a>'
  chicago: 'Fischer, Julian L. “Weak–Strong Uniqueness of Solutions to Entropy Dissipating
    Reaction–Diffusion Equations.” <i>Nonlinear Analysis: Theory, Methods and Applications</i>.
    Elsevier, 2017. <a href="https://doi.org/10.1016/j.na.2017.03.001">https://doi.org/10.1016/j.na.2017.03.001</a>.'
  ieee: 'J. L. Fischer, “Weak–strong uniqueness of solutions to entropy dissipating
    reaction–diffusion equations,” <i>Nonlinear Analysis: Theory, Methods and Applications</i>,
    vol. 159. Elsevier, pp. 181–207, 2017.'
  ista: 'Fischer JL. 2017. Weak–strong uniqueness of solutions to entropy dissipating
    reaction–diffusion equations. Nonlinear Analysis: Theory, Methods and Applications.
    159, 181–207.'
  mla: 'Fischer, Julian L. “Weak–Strong Uniqueness of Solutions to Entropy Dissipating
    Reaction–Diffusion Equations.” <i>Nonlinear Analysis: Theory, Methods and Applications</i>,
    vol. 159, Elsevier, 2017, pp. 181–207, doi:<a href="https://doi.org/10.1016/j.na.2017.03.001">10.1016/j.na.2017.03.001</a>.'
  short: 'J.L. Fischer, Nonlinear Analysis: Theory, Methods and Applications 159 (2017)
    181–207.'
corr_author: '1'
date_created: 2018-12-11T11:48:05Z
date_published: 2017-08-01T00:00:00Z
date_updated: 2026-04-16T10:01:49Z
day: '01'
department:
- _id: JuFi
doi: 10.1016/j.na.2017.03.001
external_id:
  arxiv:
  - '1703.00730'
  isi:
  - '000404309400009'
fulldoi: https://doi.org/10.1016/j.na.2017.03.001
intvolume: '       159'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1703.00730
month: '08'
oa: 1
oa_version: Submitted Version
page: 181 - 207
publication: 'Nonlinear Analysis: Theory, Methods and Applications'
publication_identifier:
  issn:
  - 0362-546X
publication_status: published
publisher: Elsevier
publist_id: '6975'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Weak–strong uniqueness of solutions to entropy dissipating reaction–diffusion
  equations
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 159
year: '2017'
...
---
_id: '713'
abstract:
- lang: eng
  text: To determine the dynamics of allelic-specific expression during mouse development,
    we analyzed RNA-seq data from 23 F1 tissues from different developmental stages,
    including 19 female tissues allowing X chromosome inactivation (XCI) escapers
    to also be detected. We demonstrate that allelic expression arising from genetic
    or epigenetic differences is highly tissue-specific. We find that tissue-specific
    strain-biased gene expression may be regulated by tissue-specific enhancers or
    by post-transcriptional differences in stability between the alleles. We also
    find that escape from X-inactivation is tissue-specific, with leg muscle showing
    an unexpectedly high rate of XCI escapers. By surveying a range of tissues during
    development, and performing extensive validation, we are able to provide a high
    confidence list of mouse imprinted genes including 18 novel genes. This shows
    that cluster size varies dynamically during development and can be substantially
    larger than previously thought, with the Igf2r cluster extending over 10 Mb in
    placenta.
article_number: e25125
article_processing_charge: No
author:
- first_name: Daniel
  full_name: Andergassen, Daniel
  last_name: Andergassen
- first_name: Christoph
  full_name: Dotter, Christoph
  id: 4C66542E-F248-11E8-B48F-1D18A9856A87
  last_name: Dotter
  orcid: 0000-0002-9033-9096
- first_name: Dyniel
  full_name: Wenzel, Dyniel
  last_name: Wenzel
- first_name: Verena
  full_name: Sigl, Verena
  last_name: Sigl
- first_name: Philipp
  full_name: Bammer, Philipp
  last_name: Bammer
- first_name: Markus
  full_name: Muckenhuber, Markus
  last_name: Muckenhuber
- first_name: Daniela
  full_name: Mayer, Daniela
  last_name: Mayer
- first_name: Tomasz
  full_name: Kulinski, Tomasz
  last_name: Kulinski
- first_name: Hans
  full_name: Theussl, Hans
  last_name: Theussl
- first_name: Josef
  full_name: Penninger, Josef
  last_name: Penninger
- first_name: Christoph
  full_name: Bock, Christoph
  last_name: Bock
- first_name: Denise
  full_name: Barlow, Denise
  last_name: Barlow
- first_name: Florian
  full_name: Pauler, Florian
  id: 48EA0138-F248-11E8-B48F-1D18A9856A87
  last_name: Pauler
  orcid: 0000-0002-7462-0048
- first_name: Quanah
  full_name: Hudson, Quanah
  last_name: Hudson
citation:
  ama: Andergassen D, Dotter C, Wenzel D, et al. Mapping the mouse Allelome reveals
    tissue specific regulation of allelic expression. <i>eLife</i>. 2017;6. doi:<a
    href="https://doi.org/10.7554/eLife.25125">10.7554/eLife.25125</a>
  apa: Andergassen, D., Dotter, C., Wenzel, D., Sigl, V., Bammer, P., Muckenhuber,
    M., … Hudson, Q. (2017). Mapping the mouse Allelome reveals tissue specific regulation
    of allelic expression. <i>ELife</i>. eLife Sciences Publications. <a href="https://doi.org/10.7554/eLife.25125">https://doi.org/10.7554/eLife.25125</a>
  chicago: Andergassen, Daniel, Christoph Dotter, Dyniel Wenzel, Verena Sigl, Philipp
    Bammer, Markus Muckenhuber, Daniela Mayer, et al. “Mapping the Mouse Allelome
    Reveals Tissue Specific Regulation of Allelic Expression.” <i>ELife</i>. eLife
    Sciences Publications, 2017. <a href="https://doi.org/10.7554/eLife.25125">https://doi.org/10.7554/eLife.25125</a>.
  ieee: D. Andergassen <i>et al.</i>, “Mapping the mouse Allelome reveals tissue specific
    regulation of allelic expression,” <i>eLife</i>, vol. 6. eLife Sciences Publications,
    2017.
  ista: Andergassen D, Dotter C, Wenzel D, Sigl V, Bammer P, Muckenhuber M, Mayer
    D, Kulinski T, Theussl H, Penninger J, Bock C, Barlow D, Pauler F, Hudson Q. 2017.
    Mapping the mouse Allelome reveals tissue specific regulation of allelic expression.
    eLife. 6, e25125.
  mla: Andergassen, Daniel, et al. “Mapping the Mouse Allelome Reveals Tissue Specific
    Regulation of Allelic Expression.” <i>ELife</i>, vol. 6, e25125, eLife Sciences
    Publications, 2017, doi:<a href="https://doi.org/10.7554/eLife.25125">10.7554/eLife.25125</a>.
  short: D. Andergassen, C. Dotter, D. Wenzel, V. Sigl, P. Bammer, M. Muckenhuber,
    D. Mayer, T. Kulinski, H. Theussl, J. Penninger, C. Bock, D. Barlow, F. Pauler,
    Q. Hudson, ELife 6 (2017).
corr_author: '1'
date_created: 2018-12-11T11:48:05Z
date_published: 2017-08-14T00:00:00Z
date_updated: 2025-09-10T11:02:33Z
day: '14'
ddc:
- '576'
department:
- _id: GaNo
- _id: SiHi
doi: 10.7554/eLife.25125
external_id:
  isi:
  - '000407617200001'
file:
- access_level: open_access
  checksum: 1ace3462e64a971b9ead896091829549
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:13:36Z
  date_updated: 2020-07-14T12:47:50Z
  file_id: '5020'
  file_name: IST-2017-885-v1+1_elife-25125-figures-v2.pdf
  file_size: 6399510
  relation: main_file
- access_level: open_access
  checksum: 6241dc31eeb87b03facadec3a53a6827
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:13:36Z
  date_updated: 2020-07-14T12:47:50Z
  file_id: '5021'
  file_name: IST-2017-885-v1+2_elife-25125-v2.pdf
  file_size: 4264398
  relation: main_file
file_date_updated: 2020-07-14T12:47:50Z
fulldoi: https://doi.org/10.7554/eLife.25125
has_accepted_license: '1'
intvolume: '         6'
isi: 1
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
project:
- _id: 25E9AF9E-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P27201-B22
  name: Revealing the mechanisms underlying drug interactions
publication: eLife
publication_identifier:
  issn:
  - 2050-084X
publication_status: published
publisher: eLife Sciences Publications
publist_id: '6971'
pubrep_id: '885'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Mapping the mouse Allelome reveals tissue specific regulation of allelic expression
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 6
year: '2017'
...
---
_id: '714'
abstract:
- lang: eng
  text: Background HIV-1 infection and drug abuse are frequently co-morbid and their
    association greatly increases the severity of HIV-1-induced neuropathology. While
    nucleus accumbens (NAcc) function is severely perturbed by drugs of abuse, little
    is known about how HIV-1 infection affects NAcc. Methods We used calcium and voltage
    imaging to investigate the effect of HIV-1 trans-activator of transcription (Tat)
    on rat NAcc. Based on previous neuronal studies, we hypothesized that Tat modulates
    intracellular Ca2+ homeostasis of NAcc neurons. Results We provide evidence that
    Tat triggers a Ca2+ signaling cascade in NAcc medium spiny neurons (MSN) expressing
    D1-like dopamine receptors leading to neuronal depolarization. Firstly, Tat induced
    inositol 1,4,5-trisphsophate (IP3) receptor-mediated Ca2+ release from endoplasmic
    reticulum, followed by Ca2+ and Na+ influx via transient receptor potential canonical
    channels. The influx of cations depolarizes the membrane promoting additional
    Ca2+ entry through voltage-gated P/Q-type Ca2+ channels and opening of tetrodotoxin-sensitive
    Na+ channels. By activating this mechanism, Tat elicits a feed-forward depolarization
    increasing the excitability of D1-phosphatidylinositol-linked NAcc MSN. We previously
    found that cocaine targets NAcc neurons directly (independent of the inhibition
    of dopamine transporter) only when IP3-generating mechanisms are concomitantly
    initiated. When tested here, cocaine produced a dose-dependent potentiation of
    the effect of Tat on cytosolic Ca2+. Conclusion We describe for the first time
    a HIV-1 Tat-triggered Ca2+ signaling in MSN of NAcc involving TRPC and depolarization
    and a potentiation of the effect of Tat by cocaine, which may be relevant for
    the reward axis in cocaine-abusing HIV-1-positive patients.
acknowledgement: This work was supported by the National Institutes of Health grants
  DA035926 (to MEA), and P30DA013429 (to EMU).
article_processing_charge: No
article_type: original
author:
- first_name: Gabriela
  full_name: Brailoiu, Gabriela
  last_name: Brailoiu
- first_name: Elena
  full_name: Deliu, Elena
  id: 37A40D7E-F248-11E8-B48F-1D18A9856A87
  last_name: Deliu
  orcid: 0000-0002-7370-5293
- first_name: Jeffrey
  full_name: Barr, Jeffrey
  last_name: Barr
- first_name: Linda
  full_name: Console Bram, Linda
  last_name: Console Bram
- first_name: Alexandra
  full_name: Ciuciu, Alexandra
  last_name: Ciuciu
- first_name: Mary
  full_name: Abood, Mary
  last_name: Abood
- first_name: Ellen
  full_name: Unterwald, Ellen
  last_name: Unterwald
- first_name: Eugen
  full_name: Brǎiloiu, Eugen
  last_name: Brǎiloiu
citation:
  ama: Brailoiu G, Deliu E, Barr J, et al. HIV Tat excites D1 receptor-like expressing
    neurons from rat nucleus accumbens. <i>Drug and Alcohol Dependence</i>. 2017;178:7-14.
    doi:<a href="https://doi.org/10.1016/j.drugalcdep.2017.04.015">10.1016/j.drugalcdep.2017.04.015</a>
  apa: Brailoiu, G., Deliu, E., Barr, J., Console Bram, L., Ciuciu, A., Abood, M.,
    … Brǎiloiu, E. (2017). HIV Tat excites D1 receptor-like expressing neurons from
    rat nucleus accumbens. <i>Drug and Alcohol Dependence</i>. Elsevier. <a href="https://doi.org/10.1016/j.drugalcdep.2017.04.015">https://doi.org/10.1016/j.drugalcdep.2017.04.015</a>
  chicago: Brailoiu, Gabriela, Elena Deliu, Jeffrey Barr, Linda Console Bram, Alexandra
    Ciuciu, Mary Abood, Ellen Unterwald, and Eugen Brǎiloiu. “HIV Tat Excites D1 Receptor-like
    Expressing Neurons from Rat Nucleus Accumbens.” <i>Drug and Alcohol Dependence</i>.
    Elsevier, 2017. <a href="https://doi.org/10.1016/j.drugalcdep.2017.04.015">https://doi.org/10.1016/j.drugalcdep.2017.04.015</a>.
  ieee: G. Brailoiu <i>et al.</i>, “HIV Tat excites D1 receptor-like expressing neurons
    from rat nucleus accumbens,” <i>Drug and Alcohol Dependence</i>, vol. 178. Elsevier,
    pp. 7–14, 2017.
  ista: Brailoiu G, Deliu E, Barr J, Console Bram L, Ciuciu A, Abood M, Unterwald
    E, Brǎiloiu E. 2017. HIV Tat excites D1 receptor-like expressing neurons from
    rat nucleus accumbens. Drug and Alcohol Dependence. 178, 7–14.
  mla: Brailoiu, Gabriela, et al. “HIV Tat Excites D1 Receptor-like Expressing Neurons
    from Rat Nucleus Accumbens.” <i>Drug and Alcohol Dependence</i>, vol. 178, Elsevier,
    2017, pp. 7–14, doi:<a href="https://doi.org/10.1016/j.drugalcdep.2017.04.015">10.1016/j.drugalcdep.2017.04.015</a>.
  short: G. Brailoiu, E. Deliu, J. Barr, L. Console Bram, A. Ciuciu, M. Abood, E.
    Unterwald, E. Brǎiloiu, Drug and Alcohol Dependence 178 (2017) 7–14.
date_created: 2018-12-11T11:48:05Z
date_published: 2017-09-01T00:00:00Z
date_updated: 2026-04-16T10:01:59Z
day: '01'
department:
- _id: GaNo
doi: 10.1016/j.drugalcdep.2017.04.015
external_id:
  isi:
  - '000409152300002'
  pmid:
  - '28623807'
fulldoi: https://doi.org/10.1016/j.drugalcdep.2017.04.015
intvolume: '       178'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5797705
month: '09'
oa: 1
oa_version: Submitted Version
page: 7 - 14
pmid: 1
publication: Drug and Alcohol Dependence
publication_identifier:
  issn:
  - 0376-8716
publication_status: published
publisher: Elsevier
publist_id: '6967'
quality_controlled: '1'
scopus_import: '1'
status: public
title: HIV Tat excites D1 receptor-like expressing neurons from rat nucleus accumbens
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 178
year: '2017'
...
---
_id: '716'
abstract:
- lang: eng
  text: 'Two-player games on graphs are central in many problems in formal verification
    and program analysis, such as synthesis and verification of open systems. In this
    work, we consider solving recursive game graphs (or pushdown game graphs) that
    model the control flow of sequential programs with recursion.While pushdown games
    have been studied before with qualitative objectives-such as reachability and
    ?-regular objectives- in this work, we study for the first time such games with
    the most well-studied quantitative objective, the mean-payoff objective. In pushdown
    games, two types of strategies are relevant: (1) global strategies, which depend
    on the entire global history; and (2) modular strategies, which have only local
    memory and thus do not depend on the context of invocation but rather only on
    the history of the current invocation of the module. Our main results are as follows:
    (1) One-player pushdown games with mean-payoff objectives under global strategies
    are decidable in polynomial time. (2) Two-player pushdown games with mean-payoff
    objectives under global strategies are undecidable. (3) One-player pushdown games
    with mean-payoff objectives under modular strategies are NP-hard. (4) Two-player
    pushdown games with mean-payoff objectives under modular strategies can be solved
    in NP (i.e., both one-player and two-player pushdown games with mean-payoff objectives
    under modular strategies are NP-complete). We also establish the optimal strategy
    complexity by showing that global strategies for mean-payoff objectives require
    infinite memory even in one-player pushdown games and memoryless modular strategies
    are sufficient in two-player pushdown games. Finally, we also show that all the
    problems have the same complexity if the stack boundedness condition is added,
    where along with the mean-payoff objective the player must also ensure that the
    stack height is bounded.'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Yaron
  full_name: Velner, Yaron
  last_name: Velner
citation:
  ama: Chatterjee K, Velner Y. The complexity of mean-payoff pushdown games. <i>Journal
    of the ACM</i>. 2017;64(5):34. doi:<a href="https://doi.org/10.1145/3121408">10.1145/3121408</a>
  apa: Chatterjee, K., &#38; Velner, Y. (2017). The complexity of mean-payoff pushdown
    games. <i>Journal of the ACM</i>. ACM. <a href="https://doi.org/10.1145/3121408">https://doi.org/10.1145/3121408</a>
  chicago: Chatterjee, Krishnendu, and Yaron Velner. “The Complexity of Mean-Payoff
    Pushdown Games.” <i>Journal of the ACM</i>. ACM, 2017. <a href="https://doi.org/10.1145/3121408">https://doi.org/10.1145/3121408</a>.
  ieee: K. Chatterjee and Y. Velner, “The complexity of mean-payoff pushdown games,”
    <i>Journal of the ACM</i>, vol. 64, no. 5. ACM, p. 34, 2017.
  ista: Chatterjee K, Velner Y. 2017. The complexity of mean-payoff pushdown games.
    Journal of the ACM. 64(5), 34.
  mla: Chatterjee, Krishnendu, and Yaron Velner. “The Complexity of Mean-Payoff Pushdown
    Games.” <i>Journal of the ACM</i>, vol. 64, no. 5, ACM, 2017, p. 34, doi:<a href="https://doi.org/10.1145/3121408">10.1145/3121408</a>.
  short: K. Chatterjee, Y. Velner, Journal of the ACM 64 (2017) 34.
corr_author: '1'
date_created: 2018-12-11T11:48:06Z
date_published: 2017-09-01T00:00:00Z
date_updated: 2025-09-10T11:01:10Z
day: '01'
department:
- _id: KrCh
doi: 10.1145/3121408
ec_funded: 1
external_id:
  arxiv:
  - '1201.2829'
  isi:
  - '000443590400005'
fulldoi: https://doi.org/10.1145/3121408
intvolume: '        64'
isi: 1
issue: '5'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1201.2829
month: '09'
oa: 1
oa_version: Preprint
page: '34'
project:
- _id: 2584A770-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P 23499-N23
  name: Modern Graph Algorithmic Techniques in Formal Verification
- _id: 25863FF4-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S11407
  name: Game Theory
- _id: 2581B60A-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '279307'
  name: 'Quantitative Graph Games: Theory and Applications'
publication: Journal of the ACM
publication_identifier:
  issn:
  - 0004-5411
publication_status: published
publisher: ACM
publist_id: '6964'
quality_controlled: '1'
scopus_import: '1'
status: public
title: The complexity of mean-payoff pushdown games
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 64
year: '2017'
...
---
_id: '7163'
abstract:
- lang: eng
  text: The de novo genome assemblies generated for this study, and the associated
    metadata.
article_processing_charge: No
author:
- first_name: Christelle
  full_name: Fraisse, Christelle
  id: 32DF5794-F248-11E8-B48F-1D18A9856A87
  last_name: Fraisse
  orcid: 0000-0001-8441-5075
citation:
  ama: Fraisse C. Supplementary Files for “The deep conservation of the Lepidoptera
    Z chromosome suggests a non canonical origin of the W.” 2017. doi:<a href="https://doi.org/10.15479/AT:ISTA:7163">10.15479/AT:ISTA:7163</a>
  apa: Fraisse, C. (2017). Supplementary Files for “The deep conservation of the Lepidoptera
    Z chromosome suggests a non canonical origin of the W.” Institute of Science and
    Technology Austria. <a href="https://doi.org/10.15479/AT:ISTA:7163">https://doi.org/10.15479/AT:ISTA:7163</a>
  chicago: Fraisse, Christelle. “Supplementary Files for ‘The Deep Conservation of
    the Lepidoptera Z Chromosome Suggests a Non Canonical Origin of the W.’” Institute
    of Science and Technology Austria, 2017. <a href="https://doi.org/10.15479/AT:ISTA:7163">https://doi.org/10.15479/AT:ISTA:7163</a>.
  ieee: C. Fraisse, “Supplementary Files for ‘The deep conservation of the Lepidoptera
    Z chromosome suggests a non canonical origin of the W.’” Institute of Science
    and Technology Austria, 2017.
  ista: Fraisse C. 2017. Supplementary Files for ‘The deep conservation of the Lepidoptera
    Z chromosome suggests a non canonical origin of the W’, Institute of Science and
    Technology Austria, <a href="https://doi.org/10.15479/AT:ISTA:7163">10.15479/AT:ISTA:7163</a>.
  mla: Fraisse, Christelle. <i>Supplementary Files for “The Deep Conservation of the
    Lepidoptera Z Chromosome Suggests a Non Canonical Origin of the W.”</i> Institute
    of Science and Technology Austria, 2017, doi:<a href="https://doi.org/10.15479/AT:ISTA:7163">10.15479/AT:ISTA:7163</a>.
  short: C. Fraisse, (2017).
contributor:
- first_name: Christelle
  id: 32DF5794-F248-11E8-B48F-1D18A9856A87
  last_name: Fraisse
  orcid: 0000-0001-8441-5075
- first_name: Marion A L
  id: 2C921A7A-F248-11E8-B48F-1D18A9856A87
  last_name: Picard
  orcid: 0000-0002-8101-2518
- first_name: Beatriz
  id: 49E1C5C6-F248-11E8-B48F-1D18A9856A87
  last_name: Vicoso
  orcid: 0000-0002-4579-8306
date_created: 2019-12-09T23:03:03Z
date_published: 2017-12-01T00:00:00Z
date_updated: 2025-09-11T07:33:33Z
day: '01'
ddc:
- '576'
department:
- _id: BeVi
- _id: NiBa
doi: 10.15479/AT:ISTA:7163
file:
- access_level: open_access
  checksum: 3cae8a2e3cbf8703399b9c483aaba7f3
  content_type: application/zip
  creator: cfraisse
  date_created: 2019-12-10T08:46:46Z
  date_updated: 2020-07-14T12:47:50Z
  file_id: '7164'
  file_name: Vicoso_Cohridella_Ndegeerella_Tsylvina_genome_assemblies.zip
  file_size: 841375478
  relation: main_file
file_date_updated: 2020-07-14T12:47:50Z
fulldoi: https://doi.org/10.15479/AT:ISTA:7163
has_accepted_license: '1'
month: '12'
oa: 1
oa_version: Published Version
project:
- _id: 250ED89C-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P28842-B22
  name: Sex chromosome evolution under male- and female- heterogamety
publisher: Institute of Science and Technology Austria
related_material:
  record:
  - id: '614'
    relation: research_paper
    status: public
status: public
title: Supplementary Files for "The deep conservation of the Lepidoptera Z chromosome
  suggests a non canonical origin of the W"
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: research_data
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2017'
...
---
_id: '717'
abstract:
- lang: eng
  text: 'We consider finite-state and recursive game graphs with multidimensional
    mean-payoff objectives. In recursive games two types of strategies are relevant:
    global strategies and modular strategies. Our contributions are: (1) We show that
    finite-state multidimensional mean-payoff games can be solved in polynomial time
    if the number of dimensions and the maximal absolute value of weights are fixed;
    whereas for arbitrary dimensions the problem is coNP-complete. (2) We show that
    one-player recursive games with multidimensional mean-payoff objectives can be
    solved in polynomial time. Both above algorithms are based on hyperplane separation
    technique. (3) For recursive games we show that under modular strategies the multidimensional
    problem is undecidable. We show that if the number of modules, exits, and the
    maximal absolute value of the weights are fixed, then one-dimensional recursive
    mean-payoff games under modular strategies can be solved in polynomial time, whereas
    for unbounded number of exits or modules the problem is NP-hard.'
acknowledgement: 'The research was supported by Austrian Science Fund (FWF) Grant
  No. P 23499-N23, FWF NFN Grant No. S11407-N23 (RiSE), ERC Start grant (279307: Graph
  Games), Microsoft faculty fellows award, the RICH Model Toolkit (ICT COST Action
  IC0901), and was carried out in partial fulfillment of the requirements for the
  Ph.D. degree of the second author.'
article_processing_charge: No
arxiv: 1
author:
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Yaron
  full_name: Velner, Yaron
  last_name: Velner
citation:
  ama: Chatterjee K, Velner Y. Hyperplane separation technique for multidimensional
    mean-payoff games. <i>Journal of Computer and System Sciences</i>. 2017;88:236-259.
    doi:<a href="https://doi.org/10.1016/j.jcss.2017.04.005">10.1016/j.jcss.2017.04.005</a>
  apa: Chatterjee, K., &#38; Velner, Y. (2017). Hyperplane separation technique for
    multidimensional mean-payoff games. <i>Journal of Computer and System Sciences</i>.
    Academic Press. <a href="https://doi.org/10.1016/j.jcss.2017.04.005">https://doi.org/10.1016/j.jcss.2017.04.005</a>
  chicago: Chatterjee, Krishnendu, and Yaron Velner. “Hyperplane Separation Technique
    for Multidimensional Mean-Payoff Games.” <i>Journal of Computer and System Sciences</i>.
    Academic Press, 2017. <a href="https://doi.org/10.1016/j.jcss.2017.04.005">https://doi.org/10.1016/j.jcss.2017.04.005</a>.
  ieee: K. Chatterjee and Y. Velner, “Hyperplane separation technique for multidimensional
    mean-payoff games,” <i>Journal of Computer and System Sciences</i>, vol. 88. Academic
    Press, pp. 236–259, 2017.
  ista: Chatterjee K, Velner Y. 2017. Hyperplane separation technique for multidimensional
    mean-payoff games. Journal of Computer and System Sciences. 88, 236–259.
  mla: Chatterjee, Krishnendu, and Yaron Velner. “Hyperplane Separation Technique
    for Multidimensional Mean-Payoff Games.” <i>Journal of Computer and System Sciences</i>,
    vol. 88, Academic Press, 2017, pp. 236–59, doi:<a href="https://doi.org/10.1016/j.jcss.2017.04.005">10.1016/j.jcss.2017.04.005</a>.
  short: K. Chatterjee, Y. Velner, Journal of Computer and System Sciences 88 (2017)
    236–259.
date_created: 2018-12-11T11:48:07Z
date_published: 2017-09-01T00:00:00Z
date_updated: 2025-09-10T11:00:30Z
day: '01'
department:
- _id: KrCh
doi: 10.1016/j.jcss.2017.04.005
ec_funded: 1
external_id:
  arxiv:
  - '1210.3141'
  isi:
  - '000403857100014'
fulldoi: https://doi.org/10.1016/j.jcss.2017.04.005
intvolume: '        88'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1210.3141
month: '09'
oa: 1
oa_version: Preprint
page: 236 - 259
project:
- _id: 2584A770-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P 23499-N23
  name: Modern Graph Algorithmic Techniques in Formal Verification
- _id: 25863FF4-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S11407
  name: Game Theory
- _id: 2581B60A-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '279307'
  name: 'Quantitative Graph Games: Theory and Applications'
- _id: 2587B514-B435-11E9-9278-68D0E5697425
  name: Microsoft Research Faculty Fellowship
publication: Journal of Computer and System Sciences
publication_status: published
publisher: Academic Press
publist_id: '6963'
quality_controlled: '1'
related_material:
  record:
  - id: '2329'
    relation: earlier_version
    status: public
scopus_import: '1'
status: public
title: Hyperplane separation technique for multidimensional mean-payoff games
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 88
year: '2017'
...
---
_id: '718'
abstract:
- lang: eng
  text: Mapping every simplex in the Delaunay mosaic of a discrete point set to the
    radius of the smallest empty circumsphere gives a generalized discrete Morse function.
    Choosing the points from a Poisson point process in ℝ n , we study the expected
    number of simplices in the Delaunay mosaic as well as the expected number of critical
    simplices and nonsingular intervals in the corresponding generalized discrete
    gradient. Observing connections with other probabilistic models, we obtain precise
    expressions for the expected numbers in low dimensions. In particular, we obtain
    the expected numbers of simplices in the Poisson–Delaunay mosaic in dimensions
    n ≤ 4.
article_processing_charge: No
arxiv: 1
author:
- first_name: Herbert
  full_name: Edelsbrunner, Herbert
  id: 3FB178DA-F248-11E8-B48F-1D18A9856A87
  last_name: Edelsbrunner
  orcid: 0000-0002-9823-6833
- first_name: Anton
  full_name: Nikitenko, Anton
  id: 3E4FF1BA-F248-11E8-B48F-1D18A9856A87
  last_name: Nikitenko
  orcid: 0000-0002-0659-3201
- first_name: Matthias
  full_name: Reitzner, Matthias
  last_name: Reitzner
citation:
  ama: Edelsbrunner H, Nikitenko A, Reitzner M. Expected sizes of poisson Delaunay
    mosaics and their discrete Morse functions. <i>Advances in Applied Probability</i>.
    2017;49(3):745-767. doi:<a href="https://doi.org/10.1017/apr.2017.20">10.1017/apr.2017.20</a>
  apa: Edelsbrunner, H., Nikitenko, A., &#38; Reitzner, M. (2017). Expected sizes
    of poisson Delaunay mosaics and their discrete Morse functions. <i>Advances in
    Applied Probability</i>. Cambridge University Press. <a href="https://doi.org/10.1017/apr.2017.20">https://doi.org/10.1017/apr.2017.20</a>
  chicago: Edelsbrunner, Herbert, Anton Nikitenko, and Matthias Reitzner. “Expected
    Sizes of Poisson Delaunay Mosaics and Their Discrete Morse Functions.” <i>Advances
    in Applied Probability</i>. Cambridge University Press, 2017. <a href="https://doi.org/10.1017/apr.2017.20">https://doi.org/10.1017/apr.2017.20</a>.
  ieee: H. Edelsbrunner, A. Nikitenko, and M. Reitzner, “Expected sizes of poisson
    Delaunay mosaics and their discrete Morse functions,” <i>Advances in Applied Probability</i>,
    vol. 49, no. 3. Cambridge University Press, pp. 745–767, 2017.
  ista: Edelsbrunner H, Nikitenko A, Reitzner M. 2017. Expected sizes of poisson Delaunay
    mosaics and their discrete Morse functions. Advances in Applied Probability. 49(3),
    745–767.
  mla: Edelsbrunner, Herbert, et al. “Expected Sizes of Poisson Delaunay Mosaics and
    Their Discrete Morse Functions.” <i>Advances in Applied Probability</i>, vol.
    49, no. 3, Cambridge University Press, 2017, pp. 745–67, doi:<a href="https://doi.org/10.1017/apr.2017.20">10.1017/apr.2017.20</a>.
  short: H. Edelsbrunner, A. Nikitenko, M. Reitzner, Advances in Applied Probability
    49 (2017) 745–767.
date_created: 2018-12-11T11:48:07Z
date_published: 2017-09-01T00:00:00Z
date_updated: 2026-04-08T14:19:30Z
day: '01'
department:
- _id: HeEd
doi: 10.1017/apr.2017.20
ec_funded: 1
external_id:
  arxiv:
  - '1607.05915'
  isi:
  - '000416417500004'
fulldoi: https://doi.org/10.1017/apr.2017.20
intvolume: '        49'
isi: 1
issue: '3'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1607.05915
month: '09'
oa: 1
oa_version: Preprint
page: 745 - 767
project:
- _id: 255D761E-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '318493'
  name: Topological Complex Systems
- _id: 2561EBF4-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: I02979-N35
  name: Persistence and stability of geometric complexes
publication: Advances in Applied Probability
publication_identifier:
  issn:
  - 0001-8678
publication_status: published
publisher: Cambridge University Press
publist_id: '6962'
quality_controlled: '1'
related_material:
  record:
  - id: '6287'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: Expected sizes of poisson Delaunay mosaics and their discrete Morse functions
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 49
year: '2017'
...
---
_id: '720'
abstract:
- lang: eng
  text: 'Advances in multi-unit recordings pave the way for statistical modeling of
    activity patterns in large neural populations. Recent studies have shown that
    the summed activity of all neurons strongly shapes the population response. A
    separate recent finding has been that neural populations also exhibit criticality,
    an anomalously large dynamic range for the probabilities of different population
    activity patterns. Motivated by these two observations, we introduce a class of
    probabilistic models which takes into account the prior knowledge that the neural
    population could be globally coupled and close to critical. These models consist
    of an energy function which parametrizes interactions between small groups of
    neurons, and an arbitrary positive, strictly increasing, and twice differentiable
    function which maps the energy of a population pattern to its probability. We
    show that: 1) augmenting a pairwise Ising model with a nonlinearity yields an
    accurate description of the activity of retinal ganglion cells which outperforms
    previous models based on the summed activity of neurons; 2) prior knowledge that
    the population is critical translates to prior expectations about the shape of
    the nonlinearity; 3) the nonlinearity admits an interpretation in terms of a continuous
    latent variable globally coupling the system whose distribution we can infer from
    data. Our method is independent of the underlying system’s state space; hence,
    it can be applied to other systems such as natural scenes or amino acid sequences
    of proteins which are also known to exhibit criticality.'
article_number: e1005763
article_processing_charge: Yes
author:
- first_name: Jan
  full_name: Humplik, Jan
  id: 2E9627A8-F248-11E8-B48F-1D18A9856A87
  last_name: Humplik
- first_name: Gasper
  full_name: Tkacik, Gasper
  id: 3D494DCA-F248-11E8-B48F-1D18A9856A87
  last_name: Tkacik
  orcid: 0000-0002-6699-1455
citation:
  ama: Humplik J, Tkačik G. Probabilistic models for neural populations that naturally
    capture global coupling and criticality. <i>PLoS Computational Biology</i>. 2017;13(9).
    doi:<a href="https://doi.org/10.1371/journal.pcbi.1005763">10.1371/journal.pcbi.1005763</a>
  apa: Humplik, J., &#38; Tkačik, G. (2017). Probabilistic models for neural populations
    that naturally capture global coupling and criticality. <i>PLoS Computational
    Biology</i>. Public Library of Science. <a href="https://doi.org/10.1371/journal.pcbi.1005763">https://doi.org/10.1371/journal.pcbi.1005763</a>
  chicago: Humplik, Jan, and Gašper Tkačik. “Probabilistic Models for Neural Populations
    That Naturally Capture Global Coupling and Criticality.” <i>PLoS Computational
    Biology</i>. Public Library of Science, 2017. <a href="https://doi.org/10.1371/journal.pcbi.1005763">https://doi.org/10.1371/journal.pcbi.1005763</a>.
  ieee: J. Humplik and G. Tkačik, “Probabilistic models for neural populations that
    naturally capture global coupling and criticality,” <i>PLoS Computational Biology</i>,
    vol. 13, no. 9. Public Library of Science, 2017.
  ista: Humplik J, Tkačik G. 2017. Probabilistic models for neural populations that
    naturally capture global coupling and criticality. PLoS Computational Biology.
    13(9), e1005763.
  mla: Humplik, Jan, and Gašper Tkačik. “Probabilistic Models for Neural Populations
    That Naturally Capture Global Coupling and Criticality.” <i>PLoS Computational
    Biology</i>, vol. 13, no. 9, e1005763, Public Library of Science, 2017, doi:<a
    href="https://doi.org/10.1371/journal.pcbi.1005763">10.1371/journal.pcbi.1005763</a>.
  short: J. Humplik, G. Tkačik, PLoS Computational Biology 13 (2017).
corr_author: '1'
date_created: 2018-12-11T11:48:08Z
date_published: 2017-09-19T00:00:00Z
date_updated: 2025-09-10T10:58:42Z
day: '19'
ddc:
- '530'
- '571'
department:
- _id: GaTk
doi: 10.1371/journal.pcbi.1005763
external_id:
  isi:
  - '000411981000042'
file:
- access_level: open_access
  checksum: 81107096c19771c36ddbe6f0282a3acb
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:18:30Z
  date_updated: 2020-07-14T12:47:53Z
  file_id: '5352'
  file_name: IST-2017-884-v1+1_journal.pcbi.1005763.pdf
  file_size: 14167050
  relation: main_file
file_date_updated: 2020-07-14T12:47:53Z
fulldoi: https://doi.org/10.1371/journal.pcbi.1005763
has_accepted_license: '1'
intvolume: '        13'
isi: 1
issue: '9'
language:
- iso: eng
month: '09'
oa: 1
oa_version: Published Version
project:
- _id: 255008E4-B435-11E9-9278-68D0E5697425
  grant_number: RGP0065/2012
  name: Information processing and computation in fish groups
- _id: 254D1A94-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P 25651-N26
  name: Sensitivity to higher-order statistics in natural scenes
publication: PLoS Computational Biology
publication_identifier:
  issn:
  - 1553-734X
publication_status: published
publisher: Public Library of Science
publist_id: '6960'
pubrep_id: '884'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Probabilistic models for neural populations that naturally capture global coupling
  and criticality
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 13
year: '2017'
...
---
_id: '721'
abstract:
- lang: eng
  text: 'Let S be a positivity-preserving symmetric linear operator acting on bounded
    functions. The nonlinear equation -1/m=z+Sm with a parameter z in the complex
    upper half-plane ℍ has a unique solution m with values in ℍ. We show that the
    z-dependence of this solution can be represented as the Stieltjes transforms of
    a family of probability measures v on ℝ. Under suitable conditions on S, we show
    that v has a real analytic density apart from finitely many algebraic singularities
    of degree at most 3. Our motivation comes from large random matrices. The solution
    m determines the density of eigenvalues of two prominent matrix ensembles: (i)
    matrices with centered independent entries whose variances are given by S and
    (ii) matrices with correlated entries with a translation-invariant correlation
    structure. Our analysis shows that the limiting eigenvalue density has only square
    root singularities or cubic root cusps; no other singularities occur.'
article_processing_charge: No
arxiv: 1
author:
- first_name: Oskari H
  full_name: Ajanki, Oskari H
  id: 36F2FB7E-F248-11E8-B48F-1D18A9856A87
  last_name: Ajanki
- first_name: Torben H
  full_name: Krüger, Torben H
  id: 3020C786-F248-11E8-B48F-1D18A9856A87
  last_name: Krüger
  orcid: 0000-0002-4821-3297
- first_name: László
  full_name: Erdös, László
  id: 4DBD5372-F248-11E8-B48F-1D18A9856A87
  last_name: Erdös
  orcid: 0000-0001-5366-9603
citation:
  ama: Ajanki OH, Krüger TH, Erdös L. Singularities of solutions to quadratic vector
    equations on the complex upper half plane. <i>Communications on Pure and Applied
    Mathematics</i>. 2017;70(9):1672-1705. doi:<a href="https://doi.org/10.1002/cpa.21639">10.1002/cpa.21639</a>
  apa: Ajanki, O. H., Krüger, T. H., &#38; Erdös, L. (2017). Singularities of solutions
    to quadratic vector equations on the complex upper half plane. <i>Communications
    on Pure and Applied Mathematics</i>. Wiley. <a href="https://doi.org/10.1002/cpa.21639">https://doi.org/10.1002/cpa.21639</a>
  chicago: Ajanki, Oskari H, Torben H Krüger, and László Erdös. “Singularities of
    Solutions to Quadratic Vector Equations on the Complex Upper Half Plane.” <i>Communications
    on Pure and Applied Mathematics</i>. Wiley, 2017. <a href="https://doi.org/10.1002/cpa.21639">https://doi.org/10.1002/cpa.21639</a>.
  ieee: O. H. Ajanki, T. H. Krüger, and L. Erdös, “Singularities of solutions to quadratic
    vector equations on the complex upper half plane,” <i>Communications on Pure and
    Applied Mathematics</i>, vol. 70, no. 9. Wiley, pp. 1672–1705, 2017.
  ista: Ajanki OH, Krüger TH, Erdös L. 2017. Singularities of solutions to quadratic
    vector equations on the complex upper half plane. Communications on Pure and Applied
    Mathematics. 70(9), 1672–1705.
  mla: Ajanki, Oskari H., et al. “Singularities of Solutions to Quadratic Vector Equations
    on the Complex Upper Half Plane.” <i>Communications on Pure and Applied Mathematics</i>,
    vol. 70, no. 9, Wiley, 2017, pp. 1672–705, doi:<a href="https://doi.org/10.1002/cpa.21639">10.1002/cpa.21639</a>.
  short: O.H. Ajanki, T.H. Krüger, L. Erdös, Communications on Pure and Applied Mathematics
    70 (2017) 1672–1705.
corr_author: '1'
date_created: 2018-12-11T11:48:08Z
date_published: 2017-09-01T00:00:00Z
date_updated: 2025-09-10T10:58:02Z
day: '01'
department:
- _id: LaEr
doi: 10.1002/cpa.21639
ec_funded: 1
external_id:
  arxiv:
  - '1512.03703'
  isi:
  - '000405752100002'
fulldoi: https://doi.org/10.1002/cpa.21639
intvolume: '        70'
isi: 1
issue: '9'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1512.03703
month: '09'
oa: 1
oa_version: Submitted Version
page: 1672 - 1705
project:
- _id: 258DCDE6-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '338804'
  name: Random matrices, universality and disordered quantum systems
publication: Communications on Pure and Applied Mathematics
publication_identifier:
  issn:
  - 0010-3640
publication_status: published
publisher: Wiley
publist_id: '6959'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Singularities of solutions to quadratic vector equations on the complex upper
  half plane
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 70
year: '2017'
...
---
_id: '722'
abstract:
- lang: eng
  text: Plants are sessile organisms rooted in one place. The soil resources that
    plants require are often distributed in a highly heterogeneous pattern. To aid
    foraging, plants have evolved roots whose growth and development are highly responsive
    to soil signals. As a result, 3D root architecture is shaped by myriad environmental
    signals to ensure resource capture is optimised and unfavourable environments
    are avoided. The first signals sensed by newly germinating seeds — gravity and
    light — direct root growth into the soil to aid seedling establishment. Heterogeneous
    soil resources, such as water, nitrogen and phosphate, also act as signals that
    shape 3D root growth to optimise uptake. Root architecture is also modified through
    biotic interactions that include soil fungi and neighbouring plants. This developmental
    plasticity results in a ‘custom-made’ 3D root system that is best adapted to forage
    for resources in each soil environment that a plant colonises.
article_processing_charge: No
author:
- first_name: Emily
  full_name: Morris, Emily
  last_name: Morris
- first_name: Marcus
  full_name: Griffiths, Marcus
  last_name: Griffiths
- first_name: Agata
  full_name: Golebiowska, Agata
  last_name: Golebiowska
- first_name: Stefan
  full_name: Mairhofer, Stefan
  last_name: Mairhofer
- first_name: Jasmine
  full_name: Burr Hersey, Jasmine
  last_name: Burr Hersey
- first_name: Tatsuaki
  full_name: Goh, Tatsuaki
  last_name: Goh
- first_name: Daniel
  full_name: Von Wangenheim, Daniel
  id: 49E91952-F248-11E8-B48F-1D18A9856A87
  last_name: Von Wangenheim
  orcid: 0000-0002-6862-1247
- first_name: Brian
  full_name: Atkinson, Brian
  last_name: Atkinson
- first_name: Craig
  full_name: Sturrock, Craig
  last_name: Sturrock
- first_name: Jonathan
  full_name: Lynch, Jonathan
  last_name: Lynch
- first_name: Kris
  full_name: Vissenberg, Kris
  last_name: Vissenberg
- first_name: Karl
  full_name: Ritz, Karl
  last_name: Ritz
- first_name: Darren
  full_name: Wells, Darren
  last_name: Wells
- first_name: Sacha
  full_name: Mooney, Sacha
  last_name: Mooney
- first_name: Malcolm
  full_name: Bennett, Malcolm
  last_name: Bennett
citation:
  ama: Morris E, Griffiths M, Golebiowska A, et al. Shaping 3D root system architecture.
    <i>Current Biology</i>. 2017;27(17):R919-R930. doi:<a href="https://doi.org/10.1016/j.cub.2017.06.043">10.1016/j.cub.2017.06.043</a>
  apa: Morris, E., Griffiths, M., Golebiowska, A., Mairhofer, S., Burr Hersey, J.,
    Goh, T., … Bennett, M. (2017). Shaping 3D root system architecture. <i>Current
    Biology</i>. Cell Press. <a href="https://doi.org/10.1016/j.cub.2017.06.043">https://doi.org/10.1016/j.cub.2017.06.043</a>
  chicago: Morris, Emily, Marcus Griffiths, Agata Golebiowska, Stefan Mairhofer, Jasmine
    Burr Hersey, Tatsuaki Goh, Daniel von Wangenheim, et al. “Shaping 3D Root System
    Architecture.” <i>Current Biology</i>. Cell Press, 2017. <a href="https://doi.org/10.1016/j.cub.2017.06.043">https://doi.org/10.1016/j.cub.2017.06.043</a>.
  ieee: E. Morris <i>et al.</i>, “Shaping 3D root system architecture,” <i>Current
    Biology</i>, vol. 27, no. 17. Cell Press, pp. R919–R930, 2017.
  ista: Morris E, Griffiths M, Golebiowska A, Mairhofer S, Burr Hersey J, Goh T, von
    Wangenheim D, Atkinson B, Sturrock C, Lynch J, Vissenberg K, Ritz K, Wells D,
    Mooney S, Bennett M. 2017. Shaping 3D root system architecture. Current Biology.
    27(17), R919–R930.
  mla: Morris, Emily, et al. “Shaping 3D Root System Architecture.” <i>Current Biology</i>,
    vol. 27, no. 17, Cell Press, 2017, pp. R919–30, doi:<a href="https://doi.org/10.1016/j.cub.2017.06.043">10.1016/j.cub.2017.06.043</a>.
  short: E. Morris, M. Griffiths, A. Golebiowska, S. Mairhofer, J. Burr Hersey, T.
    Goh, D. von Wangenheim, B. Atkinson, C. Sturrock, J. Lynch, K. Vissenberg, K.
    Ritz, D. Wells, S. Mooney, M. Bennett, Current Biology 27 (2017) R919–R930.
date_created: 2018-12-11T11:48:08Z
date_published: 2017-09-11T00:00:00Z
date_updated: 2025-09-10T10:57:15Z
day: '11'
ddc:
- '581'
department:
- _id: JiFr
doi: 10.1016/j.cub.2017.06.043
ec_funded: 1
external_id:
  isi:
  - '000410175200028'
  pmid:
  - '28898665'
file:
- access_level: open_access
  checksum: e45588b21097b408da6276a3e5eedb2e
  content_type: application/pdf
  creator: dernst
  date_created: 2019-04-17T07:46:40Z
  date_updated: 2020-07-14T12:47:54Z
  file_id: '6332'
  file_name: 2017_CurrentBiology_Morris.pdf
  file_size: 1576593
  relation: main_file
file_date_updated: 2020-07-14T12:47:54Z
fulldoi: https://doi.org/10.1016/j.cub.2017.06.043
has_accepted_license: '1'
intvolume: '        27'
isi: 1
issue: '17'
language:
- iso: eng
month: '09'
oa: 1
oa_version: Submitted Version
page: R919 - R930
pmid: 1
project:
- _id: 25681D80-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '291734'
  name: International IST Postdoc Fellowship Programme
publication: Current Biology
publication_identifier:
  issn:
  - '09609822'
publication_status: published
publisher: Cell Press
publist_id: '6956'
pubrep_id: '982'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Shaping 3D root system architecture
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 27
year: '2017'
...
---
_id: '724'
abstract:
- lang: eng
  text: We investigate the stationary and dynamical behavior of an Anderson localized
    chain coupled to a single central bound state. Although this coupling partially
    dilutes the Anderson localized peaks towards nearly resonant sites, the most weight
    of the original peaks remains unchanged. This leads to multifractal wave functions
    with a frozen spectrum of fractal dimensions, which is characteristic for localized
    phases in models with power-law hopping. Using a perturbative approach we identify
    two different dynamical regimes. At weak couplings to the central site, the transport
    of particles and information is logarithmic in time, a feature usually attributed
    to many-body localization. We connect such transport to the persistence of the
    Poisson statistics of level spacings in parts of the spectrum. In contrast, at
    stronger couplings the level repulsion is established in the entire spectrum,
    the problem can be mapped to the Fano resonance, and the transport is ballistic.
acknowledgement: "We  would  like  to  thank  Dmitry  Abanin,  Christophe  De\r\nBeule,
  \ Joel  Moore,  Romain  Vasseur,  and  Norman  Yao  for\r\nmany  stimulating  discussions.
  \ Financial  support  has  been\r\nprovided  by  the  Deutsche  Forschungsgemeinschaft
  \ (DFG)\r\nvia Grant No. TR950/8-1, SFB 1170 “ToCoTronics” and the\r\nENB  Graduate
  \ School  on  Topological  Insulators.  M.S.  was\r\nsupported by Gordon and Betty
  Moore Foundation’s EPiQS\r\nInitiative through Grant No. GBMF4307. F.P. acknowledges\r\nsupport
  from the DFG Research Unit FOR 1807 through Grant\r\nNo. PO 1370/2-1."
article_number: '104203'
article_processing_charge: No
arxiv: 1
author:
- first_name: Daniel
  full_name: Hetterich, Daniel
  last_name: Hetterich
- first_name: Maksym
  full_name: Serbyn, Maksym
  id: 47809E7E-F248-11E8-B48F-1D18A9856A87
  last_name: Serbyn
  orcid: 0000-0002-2399-5827
- first_name: Fernando
  full_name: Domínguez, Fernando
  last_name: Domínguez
- first_name: Frank
  full_name: Pollmann, Frank
  last_name: Pollmann
- first_name: Björn
  full_name: Trauzettel, Björn
  last_name: Trauzettel
citation:
  ama: Hetterich D, Serbyn M, Domínguez F, Pollmann F, Trauzettel B. Noninteracting
    central site model localization and logarithmic entanglement growth. <i>Physical
    Review B</i>. 2017;96(10). doi:<a href="https://doi.org/10.1103/PhysRevB.96.104203">10.1103/PhysRevB.96.104203</a>
  apa: Hetterich, D., Serbyn, M., Domínguez, F., Pollmann, F., &#38; Trauzettel, B.
    (2017). Noninteracting central site model localization and logarithmic entanglement
    growth. <i>Physical Review B</i>. American Physical Society. <a href="https://doi.org/10.1103/PhysRevB.96.104203">https://doi.org/10.1103/PhysRevB.96.104203</a>
  chicago: Hetterich, Daniel, Maksym Serbyn, Fernando Domínguez, Frank Pollmann, and
    Björn Trauzettel. “Noninteracting Central Site Model Localization and Logarithmic
    Entanglement Growth.” <i>Physical Review B</i>. American Physical Society, 2017.
    <a href="https://doi.org/10.1103/PhysRevB.96.104203">https://doi.org/10.1103/PhysRevB.96.104203</a>.
  ieee: D. Hetterich, M. Serbyn, F. Domínguez, F. Pollmann, and B. Trauzettel, “Noninteracting
    central site model localization and logarithmic entanglement growth,” <i>Physical
    Review B</i>, vol. 96, no. 10. American Physical Society, 2017.
  ista: Hetterich D, Serbyn M, Domínguez F, Pollmann F, Trauzettel B. 2017. Noninteracting
    central site model localization and logarithmic entanglement growth. Physical
    Review B. 96(10), 104203.
  mla: Hetterich, Daniel, et al. “Noninteracting Central Site Model Localization and
    Logarithmic Entanglement Growth.” <i>Physical Review B</i>, vol. 96, no. 10, 104203,
    American Physical Society, 2017, doi:<a href="https://doi.org/10.1103/PhysRevB.96.104203">10.1103/PhysRevB.96.104203</a>.
  short: D. Hetterich, M. Serbyn, F. Domínguez, F. Pollmann, B. Trauzettel, Physical
    Review B 96 (2017).
date_created: 2018-12-11T11:48:09Z
date_published: 2017-09-13T00:00:00Z
date_updated: 2025-09-10T10:56:34Z
day: '13'
department:
- _id: MaSe
doi: 10.1103/PhysRevB.96.104203
external_id:
  arxiv:
  - '1701.02744'
  isi:
  - '000410590300001'
fulldoi: https://doi.org/10.1103/PhysRevB.96.104203
intvolume: '        96'
isi: 1
issue: '10'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1701.02744
month: '09'
oa: 1
oa_version: Submitted Version
publication: Physical Review B
publication_identifier:
  issn:
  - 2469-9950
publication_status: published
publisher: American Physical Society
publist_id: '6955'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Noninteracting central site model localization and logarithmic entanglement
  growth
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 96
year: '2017'
...
---
_id: '725'
abstract:
- lang: eng
  text: Individual computations and social interactions underlying collective behavior
    in groups of animals are of great ethological, behavioral, and theoretical interest.
    While complex individual behaviors have successfully been parsed into small dictionaries
    of stereotyped behavioral modes, studies of collective behavior largely ignored
    these findings; instead, their focus was on inferring single, mode-independent
    social interaction rules that reproduced macroscopic and often qualitative features
    of group behavior. Here, we bring these two approaches together to predict individual
    swimming patterns of adult zebrafish in a group. We show that fish alternate between
    an “active” mode, in which they are sensitive to the swimming patterns of conspecifics,
    and a “passive” mode, where they ignore them. Using a model that accounts for
    these two modes explicitly, we predict behaviors of individual fish with high
    accuracy, outperforming previous approaches that assumed a single continuous computation
    by individuals and simple metric or topological weighing of neighbors’ behavior.
    At the group level, switching between active and passive modes is uncorrelated
    among fish, but correlated directional swimming behavior still emerges. Our quantitative
    approach for studying complex, multi-modal individual behavior jointly with emergent
    group behavior is readily extensible to additional behavioral modes and their
    neural correlates as well as to other species.
article_processing_charge: No
author:
- first_name: Roy
  full_name: Harpaz, Roy
  last_name: Harpaz
- first_name: Gasper
  full_name: Tkacik, Gasper
  id: 3D494DCA-F248-11E8-B48F-1D18A9856A87
  last_name: Tkacik
  orcid: 0000-0002-6699-1455
- first_name: Elad
  full_name: Schneidman, Elad
  last_name: Schneidman
citation:
  ama: Harpaz R, Tkačik G, Schneidman E. Discrete modes of social information processing
    predict individual behavior of fish in a group. <i>PNAS</i>. 2017;114(38):10149-10154.
    doi:<a href="https://doi.org/10.1073/pnas.1703817114">10.1073/pnas.1703817114</a>
  apa: Harpaz, R., Tkačik, G., &#38; Schneidman, E. (2017). Discrete modes of social
    information processing predict individual behavior of fish in a group. <i>PNAS</i>.
    National Academy of Sciences. <a href="https://doi.org/10.1073/pnas.1703817114">https://doi.org/10.1073/pnas.1703817114</a>
  chicago: Harpaz, Roy, Gašper Tkačik, and Elad Schneidman. “Discrete Modes of Social
    Information Processing Predict Individual Behavior of Fish in a Group.” <i>PNAS</i>.
    National Academy of Sciences, 2017. <a href="https://doi.org/10.1073/pnas.1703817114">https://doi.org/10.1073/pnas.1703817114</a>.
  ieee: R. Harpaz, G. Tkačik, and E. Schneidman, “Discrete modes of social information
    processing predict individual behavior of fish in a group,” <i>PNAS</i>, vol.
    114, no. 38. National Academy of Sciences, pp. 10149–10154, 2017.
  ista: Harpaz R, Tkačik G, Schneidman E. 2017. Discrete modes of social information
    processing predict individual behavior of fish in a group. PNAS. 114(38), 10149–10154.
  mla: Harpaz, Roy, et al. “Discrete Modes of Social Information Processing Predict
    Individual Behavior of Fish in a Group.” <i>PNAS</i>, vol. 114, no. 38, National
    Academy of Sciences, 2017, pp. 10149–54, doi:<a href="https://doi.org/10.1073/pnas.1703817114">10.1073/pnas.1703817114</a>.
  short: R. Harpaz, G. Tkačik, E. Schneidman, PNAS 114 (2017) 10149–10154.
date_created: 2018-12-11T11:48:10Z
date_published: 2017-09-19T00:00:00Z
date_updated: 2025-09-10T10:53:06Z
day: '19'
department:
- _id: GaTk
doi: 10.1073/pnas.1703817114
external_id:
  isi:
  - '000411157100063'
  pmid:
  - '28874581'
fulldoi: https://doi.org/10.1073/pnas.1703817114
intvolume: '       114'
isi: 1
issue: '38'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5617265/
month: '09'
oa: 1
oa_version: Submitted Version
page: 10149 - 10154
pmid: 1
publication: PNAS
publication_identifier:
  issn:
  - 0027-8424
publication_status: published
publisher: National Academy of Sciences
publist_id: '6953'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Discrete modes of social information processing predict individual behavior
  of fish in a group
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 114
year: '2017'
...
---
_id: '726'
abstract:
- lang: eng
  text: The morphogenesis of branched organs remains a subject of abiding interest.
    Although much is known about the underlying signaling pathways, it remains unclear
    how macroscopic features of branched organs, including their size, network topology,
    and spatial patterning, are encoded. Here, we show that, in mouse mammary gland,
    kidney, and human prostate, these features can be explained quantitatively within
    a single unifying framework of branching and annihilating random walks. Based
    on quantitative analyses of large-scale organ reconstructions and proliferation
    kinetics measurements, we propose that morphogenesis follows from the proliferative
    activity of equipotent tips that stochastically branch and randomly explore their
    environment but compete neutrally for space, becoming proliferatively inactive
    when in proximity with neighboring ducts. These results show that complex branched
    epithelial structures develop as a self-organized process, reliant upon a strikingly
    simple but generic rule, without recourse to a rigid and deterministic sequence
    of genetically programmed events.
article_processing_charge: No
author:
- first_name: Edouard B
  full_name: Hannezo, Edouard B
  id: 3A9DB764-F248-11E8-B48F-1D18A9856A87
  last_name: Hannezo
  orcid: 0000-0001-6005-1561
- first_name: Colinda
  full_name: Scheele, Colinda
  last_name: Scheele
- first_name: Mohammad
  full_name: Moad, Mohammad
  last_name: Moad
- first_name: Nicholas
  full_name: Drogo, Nicholas
  last_name: Drogo
- first_name: Rakesh
  full_name: Heer, Rakesh
  last_name: Heer
- first_name: Rosemary
  full_name: Sampogna, Rosemary
  last_name: Sampogna
- first_name: Jacco
  full_name: Van Rheenen, Jacco
  last_name: Van Rheenen
- first_name: Benjamin
  full_name: Simons, Benjamin
  last_name: Simons
citation:
  ama: Hannezo EB, Scheele C, Moad M, et al. A unifying theory of branching morphogenesis.
    <i>Cell</i>. 2017;171(1):242-255. doi:<a href="https://doi.org/10.1016/j.cell.2017.08.026">10.1016/j.cell.2017.08.026</a>
  apa: Hannezo, E. B., Scheele, C., Moad, M., Drogo, N., Heer, R., Sampogna, R., …
    Simons, B. (2017). A unifying theory of branching morphogenesis. <i>Cell</i>.
    Cell Press. <a href="https://doi.org/10.1016/j.cell.2017.08.026">https://doi.org/10.1016/j.cell.2017.08.026</a>
  chicago: Hannezo, Edouard B, Colinda Scheele, Mohammad Moad, Nicholas Drogo, Rakesh
    Heer, Rosemary Sampogna, Jacco Van Rheenen, and Benjamin Simons. “A Unifying Theory
    of Branching Morphogenesis.” <i>Cell</i>. Cell Press, 2017. <a href="https://doi.org/10.1016/j.cell.2017.08.026">https://doi.org/10.1016/j.cell.2017.08.026</a>.
  ieee: E. B. Hannezo <i>et al.</i>, “A unifying theory of branching morphogenesis,”
    <i>Cell</i>, vol. 171, no. 1. Cell Press, pp. 242–255, 2017.
  ista: Hannezo EB, Scheele C, Moad M, Drogo N, Heer R, Sampogna R, Van Rheenen J,
    Simons B. 2017. A unifying theory of branching morphogenesis. Cell. 171(1), 242–255.
  mla: Hannezo, Edouard B., et al. “A Unifying Theory of Branching Morphogenesis.”
    <i>Cell</i>, vol. 171, no. 1, Cell Press, 2017, pp. 242–55, doi:<a href="https://doi.org/10.1016/j.cell.2017.08.026">10.1016/j.cell.2017.08.026</a>.
  short: E.B. Hannezo, C. Scheele, M. Moad, N. Drogo, R. Heer, R. Sampogna, J. Van
    Rheenen, B. Simons, Cell 171 (2017) 242–255.
corr_author: '1'
date_created: 2018-12-11T11:48:10Z
date_published: 2017-09-21T00:00:00Z
date_updated: 2025-07-10T11:54:27Z
day: '21'
ddc:
- '539'
department:
- _id: EdHa
doi: 10.1016/j.cell.2017.08.026
external_id:
  isi:
  - '000411331800024'
file:
- access_level: open_access
  checksum: 7a036d93a9e2e597af9bb504d6133aca
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:11:17Z
  date_updated: 2020-07-14T12:47:55Z
  file_id: '4870'
  file_name: IST-2017-883-v1+1_PIIS0092867417309510.pdf
  file_size: 12670204
  relation: main_file
file_date_updated: 2020-07-14T12:47:55Z
fulldoi: https://doi.org/10.1016/j.cell.2017.08.026
has_accepted_license: '1'
intvolume: '       171'
isi: 1
issue: '1'
language:
- iso: eng
month: '09'
oa: 1
oa_version: Published Version
page: 242 - 255
publication: Cell
publication_identifier:
  issn:
  - 0092-8674
publication_status: published
publisher: Cell Press
publist_id: '6952'
pubrep_id: '883'
quality_controlled: '1'
scopus_import: '1'
status: public
title: A unifying theory of branching morphogenesis
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 171
year: '2017'
...
---
_id: '7289'
abstract:
- lang: eng
  text: Aprotic sodium–O2 batteries require the reversible formation/dissolution of
    sodium superoxide (NaO2) on cycling. Poor cycle life has been associated with
    parasitic chemistry caused by the reactivity of electrolyte and electrode with
    NaO2, a strong nucleophile and base. Its reactivity can, however, not consistently
    explain the side reactions and irreversibility. Herein we show that singlet oxygen
    (1O2) forms at all stages of cycling and that it is a main driver for parasitic
    chemistry. It was detected in‐ and ex‐situ via a 1O2 trap that selectively and
    rapidly forms a stable adduct with 1O2. The 1O2 formation mechanism involves proton‐mediated
    superoxide disproportionation on discharge, rest, and charge below ca. 3.3 V,
    and direct electrochemical 1O2 evolution above ca. 3.3 V. Trace water, which is
    needed for high capacities also drives parasitic chemistry. Controlling the highly
    reactive singlet oxygen is thus crucial for achieving highly reversible cell operation.
article_processing_charge: No
article_type: original
author:
- first_name: Lukas
  full_name: Schafzahl, Lukas
  last_name: Schafzahl
- first_name: Nika
  full_name: Mahne, Nika
  last_name: Mahne
- first_name: Bettina
  full_name: Schafzahl, Bettina
  last_name: Schafzahl
- first_name: Martin
  full_name: Wilkening, Martin
  last_name: Wilkening
- first_name: Christian
  full_name: Slugovc, Christian
  last_name: Slugovc
- first_name: Sergey M.
  full_name: Borisov, Sergey M.
  last_name: Borisov
- first_name: Stefan Alexander
  full_name: Freunberger, Stefan Alexander
  id: A8CA28E6-CE23-11E9-AD2D-EC27E6697425
  last_name: Freunberger
  orcid: 0000-0003-2902-5319
citation:
  ama: Schafzahl L, Mahne N, Schafzahl B, et al. Singlet oxygen during cycling of
    the aprotic sodium-O2 battery. <i>Angewandte Chemie International Edition</i>.
    2017;56(49):15728-15732. doi:<a href="https://doi.org/10.1002/anie.201709351">10.1002/anie.201709351</a>
  apa: Schafzahl, L., Mahne, N., Schafzahl, B., Wilkening, M., Slugovc, C., Borisov,
    S. M., &#38; Freunberger, S. A. (2017). Singlet oxygen during cycling of the aprotic
    sodium-O2 battery. <i>Angewandte Chemie International Edition</i>. Wiley. <a href="https://doi.org/10.1002/anie.201709351">https://doi.org/10.1002/anie.201709351</a>
  chicago: Schafzahl, Lukas, Nika Mahne, Bettina Schafzahl, Martin Wilkening, Christian
    Slugovc, Sergey M. Borisov, and Stefan Alexander Freunberger. “Singlet Oxygen
    during Cycling of the Aprotic Sodium-O2 Battery.” <i>Angewandte Chemie International
    Edition</i>. Wiley, 2017. <a href="https://doi.org/10.1002/anie.201709351">https://doi.org/10.1002/anie.201709351</a>.
  ieee: L. Schafzahl <i>et al.</i>, “Singlet oxygen during cycling of the aprotic
    sodium-O2 battery,” <i>Angewandte Chemie International Edition</i>, vol. 56, no.
    49. Wiley, pp. 15728–15732, 2017.
  ista: Schafzahl L, Mahne N, Schafzahl B, Wilkening M, Slugovc C, Borisov SM, Freunberger
    SA. 2017. Singlet oxygen during cycling of the aprotic sodium-O2 battery. Angewandte
    Chemie International Edition. 56(49), 15728–15732.
  mla: Schafzahl, Lukas, et al. “Singlet Oxygen during Cycling of the Aprotic Sodium-O2
    Battery.” <i>Angewandte Chemie International Edition</i>, vol. 56, no. 49, Wiley,
    2017, pp. 15728–32, doi:<a href="https://doi.org/10.1002/anie.201709351">10.1002/anie.201709351</a>.
  short: L. Schafzahl, N. Mahne, B. Schafzahl, M. Wilkening, C. Slugovc, S.M. Borisov,
    S.A. Freunberger, Angewandte Chemie International Edition 56 (2017) 15728–15732.
date_created: 2020-01-15T12:15:05Z
date_published: 2017-12-04T00:00:00Z
date_updated: 2021-01-12T08:12:47Z
day: '04'
ddc:
- '540'
doi: 10.1002/anie.201709351
extern: '1'
file:
- access_level: open_access
  checksum: 3c5b1e51954554dffb13c7d58f69836c
  content_type: application/pdf
  creator: dernst
  date_created: 2020-01-26T14:58:07Z
  date_updated: 2020-07-14T12:47:55Z
  file_id: '7362'
  file_name: 2017_AngChemieInternat_Schafzahl.pdf
  file_size: 1013492
  relation: main_file
file_date_updated: 2020-07-14T12:47:55Z
fulldoi: https://doi.org/10.1002/anie.201709351
has_accepted_license: '1'
intvolume: '        56'
issue: '49'
language:
- iso: eng
license: https://creativecommons.org/licenses/by-nc/4.0/
month: '12'
oa: 1
oa_version: Published Version
page: 15728-15732
publication: Angewandte Chemie International Edition
publication_identifier:
  issn:
  - 1433-7851
publication_status: published
publisher: Wiley
quality_controlled: '1'
status: public
title: Singlet oxygen during cycling of the aprotic sodium-O2 battery
tmp:
  image: /images/cc_by_nc.png
  legal_code_url: https://creativecommons.org/licenses/by-nc/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)
  short: CC BY-NC (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 56
year: '2017'
...
---
_id: '7290'
abstract:
- lang: eng
  text: 'We report a family of Pt and Pd benzoporphyrin dyes with versatile photophysical
    properties and easy access from cheap and abundant chemicals. Attaching 4 or 8
    alkylsulfone groups onto a meso-tetraphenyltetrabenzoporphyrin (TPTBP) macrocylcle
    renders the dyes highly soluble in organic solvents, photostable, and electron-deficient
    with the redox potential raised up to 0.65 V versus the parent porphyrin. The
    new dyes intensively absorb in the blue (Soret band, 440–480 nm) and in the red
    (Q-band, 620–650 nm) parts of the electromagnetic spectrum and show bright phosphorescence
    at room-temperature in the NIR with quantum yields up to 30% in solution. The
    small singlet–triplet energy gap yields unusually efficient thermally activated
    delayed fluorescence (TADF) at elevated temperatures in solution and in polymeric
    matrices with quantum yields as high as 27% at 120 °C, which is remarkable for
    benzoporphyrins. Apart from oxygen sensing, these properties enable unprecedented
    simultaneous, self-referenced oxygen and temperature sensing with a single indicator
    dye: whereas oxygen can be determined either via the decay time of phosphorescence
    or TADF, the temperature is accessed via the ratio of the two emissions. Moreover,
    the dyes are efficient sensitizers for triplet–triplet annihilation (TTA)-based
    upconversion making possible longer sensitization wavelength than the conventional
    benzoporphyrin complexes. The Pt-octa-sulfone dye also features interesting semireversible
    transformation in basic media, which generates new NIR absorbing species.'
article_processing_charge: No
article_type: original
author:
- first_name: Peter W.
  full_name: Zach, Peter W.
  last_name: Zach
- first_name: Stefan Alexander
  full_name: Freunberger, Stefan Alexander
  id: A8CA28E6-CE23-11E9-AD2D-EC27E6697425
  last_name: Freunberger
  orcid: 0000-0003-2902-5319
- first_name: Ingo
  full_name: Klimant, Ingo
  last_name: Klimant
- first_name: Sergey M.
  full_name: Borisov, Sergey M.
  last_name: Borisov
citation:
  ama: 'Zach PW, Freunberger SA, Klimant I, Borisov SM. Electron-deficient near-infrared
    Pt(II) and Pd(II) benzoporphyrins with dual phosphorescence and unusually efficient
    thermally activated delayed fluorescence: First demonstration of simultaneous
    oxygen and temperature sensing with a single emitter. <i>ACS Applied Materials
    &#38; Interfaces</i>. 2017;9(43):38008-38023. doi:<a href="https://doi.org/10.1021/acsami.7b10669">10.1021/acsami.7b10669</a>'
  apa: 'Zach, P. W., Freunberger, S. A., Klimant, I., &#38; Borisov, S. M. (2017).
    Electron-deficient near-infrared Pt(II) and Pd(II) benzoporphyrins with dual phosphorescence
    and unusually efficient thermally activated delayed fluorescence: First demonstration
    of simultaneous oxygen and temperature sensing with a single emitter. <i>ACS Applied
    Materials &#38; Interfaces</i>. ACS. <a href="https://doi.org/10.1021/acsami.7b10669">https://doi.org/10.1021/acsami.7b10669</a>'
  chicago: 'Zach, Peter W., Stefan Alexander Freunberger, Ingo Klimant, and Sergey
    M. Borisov. “Electron-Deficient near-Infrared Pt(II) and Pd(II) Benzoporphyrins
    with Dual Phosphorescence and Unusually Efficient Thermally Activated Delayed
    Fluorescence: First Demonstration of Simultaneous Oxygen and Temperature Sensing
    with a Single Emitter.” <i>ACS Applied Materials &#38; Interfaces</i>. ACS, 2017.
    <a href="https://doi.org/10.1021/acsami.7b10669">https://doi.org/10.1021/acsami.7b10669</a>.'
  ieee: 'P. W. Zach, S. A. Freunberger, I. Klimant, and S. M. Borisov, “Electron-deficient
    near-infrared Pt(II) and Pd(II) benzoporphyrins with dual phosphorescence and
    unusually efficient thermally activated delayed fluorescence: First demonstration
    of simultaneous oxygen and temperature sensing with a single emitter,” <i>ACS
    Applied Materials &#38; Interfaces</i>, vol. 9, no. 43. ACS, pp. 38008–38023,
    2017.'
  ista: 'Zach PW, Freunberger SA, Klimant I, Borisov SM. 2017. Electron-deficient
    near-infrared Pt(II) and Pd(II) benzoporphyrins with dual phosphorescence and
    unusually efficient thermally activated delayed fluorescence: First demonstration
    of simultaneous oxygen and temperature sensing with a single emitter. ACS Applied
    Materials &#38; Interfaces. 9(43), 38008–38023.'
  mla: 'Zach, Peter W., et al. “Electron-Deficient near-Infrared Pt(II) and Pd(II)
    Benzoporphyrins with Dual Phosphorescence and Unusually Efficient Thermally Activated
    Delayed Fluorescence: First Demonstration of Simultaneous Oxygen and Temperature
    Sensing with a Single Emitter.” <i>ACS Applied Materials &#38; Interfaces</i>,
    vol. 9, no. 43, ACS, 2017, pp. 38008–23, doi:<a href="https://doi.org/10.1021/acsami.7b10669">10.1021/acsami.7b10669</a>.'
  short: P.W. Zach, S.A. Freunberger, I. Klimant, S.M. Borisov, ACS Applied Materials
    &#38; Interfaces 9 (2017) 38008–38023.
date_created: 2020-01-15T12:15:16Z
date_published: 2017-10-10T00:00:00Z
date_updated: 2021-01-12T08:12:48Z
day: '10'
ddc:
- '540'
- '543'
doi: 10.1021/acsami.7b10669
extern: '1'
file:
- access_level: open_access
  checksum: 0461c990eb910f19a70c6e5349ec35ed
  content_type: application/pdf
  creator: sfreunbe
  date_created: 2020-06-29T14:49:32Z
  date_updated: 2020-07-14T12:47:55Z
  file_id: '8051'
  file_name: Paper_Manuscript_submitted.pdf
  file_size: 2072792
  relation: main_file
file_date_updated: 2020-07-14T12:47:55Z
fulldoi: https://doi.org/10.1021/acsami.7b10669
has_accepted_license: '1'
intvolume: '         9'
issue: '43'
language:
- iso: eng
month: '10'
oa: 1
oa_version: Submitted Version
page: 38008-38023
publication: ACS Applied Materials & Interfaces
publication_identifier:
  eissn:
  - 1944-8252
  issn:
  - 1944-8244
publication_status: published
publisher: ACS
quality_controlled: '1'
status: public
title: 'Electron-deficient near-infrared Pt(II) and Pd(II) benzoporphyrins with dual
  phosphorescence and unusually efficient thermally activated delayed fluorescence:
  First demonstration of simultaneous oxygen and temperature sensing with a single
  emitter'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 9
year: '2017'
...
---
_id: '7292'
abstract:
- lang: eng
  text: 'Rechargeable Li–O2 batteries have amongst the highest formal energy and could
    store significantly more energy than other rechargeable batteries in practice
    if at least a large part of their promise could be realized. Realization, however,
    still faces many challenges than can only be overcome by fundamental understanding
    of the processes taking place. Here, we review recent advances in understanding
    the chemistry of the Li–O2 cathode and provide a perspective on dominant research
    needs. We put particular emphasis on issues that are often grossly misunderstood:
    realistic performance metrics and their reporting as well as identifying reversibility
    and quantitative measures to do so. Parasitic reactions are the prime obstacle
    for reversible cell operation and have recently been identified to be predominantly
    caused by singlet oxygen and not by reduced oxygen species as thought before.
    We discuss the far reaching implications of this finding on electrolyte and cathode
    stability, electrocatalysis, and future research needs.'
article_processing_charge: No
article_type: original
author:
- first_name: Nika
  full_name: Mahne, Nika
  last_name: Mahne
- first_name: Olivier
  full_name: Fontaine, Olivier
  last_name: Fontaine
- first_name: Musthafa Ottakam
  full_name: Thotiyl, Musthafa Ottakam
  last_name: Thotiyl
- first_name: Martin
  full_name: Wilkening, Martin
  last_name: Wilkening
- first_name: Stefan Alexander
  full_name: Freunberger, Stefan Alexander
  id: A8CA28E6-CE23-11E9-AD2D-EC27E6697425
  last_name: Freunberger
  orcid: 0000-0003-2902-5319
citation:
  ama: Mahne N, Fontaine O, Thotiyl MO, Wilkening M, Freunberger SA. Mechanism and
    performance of lithium–oxygen batteries – a perspective. <i>Chemical Science</i>.
    2017;8(10):6716-6729. doi:<a href="https://doi.org/10.1039/c7sc02519j">10.1039/c7sc02519j</a>
  apa: Mahne, N., Fontaine, O., Thotiyl, M. O., Wilkening, M., &#38; Freunberger,
    S. A. (2017). Mechanism and performance of lithium–oxygen batteries – a perspective.
    <i>Chemical Science</i>. RSC. <a href="https://doi.org/10.1039/c7sc02519j">https://doi.org/10.1039/c7sc02519j</a>
  chicago: Mahne, Nika, Olivier Fontaine, Musthafa Ottakam Thotiyl, Martin Wilkening,
    and Stefan Alexander Freunberger. “Mechanism and Performance of Lithium–Oxygen
    Batteries – a Perspective.” <i>Chemical Science</i>. RSC, 2017. <a href="https://doi.org/10.1039/c7sc02519j">https://doi.org/10.1039/c7sc02519j</a>.
  ieee: N. Mahne, O. Fontaine, M. O. Thotiyl, M. Wilkening, and S. A. Freunberger,
    “Mechanism and performance of lithium–oxygen batteries – a perspective,” <i>Chemical
    Science</i>, vol. 8, no. 10. RSC, pp. 6716–6729, 2017.
  ista: Mahne N, Fontaine O, Thotiyl MO, Wilkening M, Freunberger SA. 2017. Mechanism
    and performance of lithium–oxygen batteries – a perspective. Chemical Science.
    8(10), 6716–6729.
  mla: Mahne, Nika, et al. “Mechanism and Performance of Lithium–Oxygen Batteries
    – a Perspective.” <i>Chemical Science</i>, vol. 8, no. 10, RSC, 2017, pp. 6716–29,
    doi:<a href="https://doi.org/10.1039/c7sc02519j">10.1039/c7sc02519j</a>.
  short: N. Mahne, O. Fontaine, M.O. Thotiyl, M. Wilkening, S.A. Freunberger, Chemical
    Science 8 (2017) 6716–6729.
date_created: 2020-01-15T12:15:42Z
date_published: 2017-07-31T00:00:00Z
date_updated: 2021-01-12T08:12:49Z
day: '31'
ddc:
- '540'
doi: 10.1039/c7sc02519j
extern: '1'
file:
- access_level: open_access
  checksum: 70c7c2ce5430b6e8605ccbf0275f1e80
  content_type: application/pdf
  creator: dernst
  date_created: 2020-01-26T15:04:44Z
  date_updated: 2020-07-14T12:47:55Z
  file_id: '7363'
  file_name: 2017_ChemicalScience_Mahne.pdf
  file_size: 992106
  relation: main_file
file_date_updated: 2020-07-14T12:47:55Z
fulldoi: https://doi.org/10.1039/c7sc02519j
has_accepted_license: '1'
intvolume: '         8'
issue: '10'
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
page: 6716-6729
publication: Chemical Science
publication_identifier:
  eissn:
  - 2041-6539
  issn:
  - 2041-6520
publication_status: published
publisher: RSC
quality_controlled: '1'
status: public
title: Mechanism and performance of lithium–oxygen batteries – a perspective
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 8
year: '2017'
...
---
_id: '732'
abstract:
- lang: eng
  text: 'Background: Social insects form densely crowded societies in environments
    with high pathogen loads, but have evolved collective defences that mitigate the
    impact of disease. However, colony-founding queens lack this protection and suffer
    high rates of mortality. The impact of pathogens may be exacerbated in species
    where queens found colonies together, as healthy individuals may contract pathogens
    from infectious co-founders. Therefore, we tested whether ant queens avoid founding
    colonies with pathogen-exposed conspecifics and how they might limit disease transmission
    from infectious individuals. Results: Using Lasius Niger queens and a naturally
    infecting fungal pathogen Metarhizium brunneum, we observed that queens were equally
    likely to found colonies with another pathogen-exposed or sham-treated queen.
    However, when one queen died, the surviving individual performed biting, burial
    and removal of the corpse. These undertaking behaviours were performed prophylactically,
    i.e. targeted equally towards non-infected and infected corpses, as well as carried
    out before infected corpses became infectious. Biting and burial reduced the risk
    of the queens contracting and dying from disease from an infectious corpse of
    a dead co-foundress. Conclusions: We show that co-founding ant queens express
    undertaking behaviours that, in mature colonies, are performed exclusively by
    workers. Such infection avoidance behaviours act before the queens can contract
    the disease and will therefore improve the overall chance of colony founding success
    in ant queens.'
article_number: '219'
article_processing_charge: Yes
article_type: original
author:
- first_name: Christopher
  full_name: Pull, Christopher
  id: 3C7F4840-F248-11E8-B48F-1D18A9856A87
  last_name: Pull
  orcid: 0000-0003-1122-3982
- first_name: Sylvia
  full_name: Cremer, Sylvia
  id: 2F64EC8C-F248-11E8-B48F-1D18A9856A87
  last_name: Cremer
  orcid: 0000-0002-2193-3868
citation:
  ama: Pull C, Cremer S. Co-founding ant queens prevent disease by performing prophylactic
    undertaking behaviour. <i>BMC Evolutionary Biology</i>. 2017;17(1). doi:<a href="https://doi.org/10.1186/s12862-017-1062-4">10.1186/s12862-017-1062-4</a>
  apa: Pull, C., &#38; Cremer, S. (2017). Co-founding ant queens prevent disease by
    performing prophylactic undertaking behaviour. <i>BMC Evolutionary Biology</i>.
    BioMed Central. <a href="https://doi.org/10.1186/s12862-017-1062-4">https://doi.org/10.1186/s12862-017-1062-4</a>
  chicago: Pull, Christopher, and Sylvia Cremer. “Co-Founding Ant Queens Prevent Disease
    by Performing Prophylactic Undertaking Behaviour.” <i>BMC Evolutionary Biology</i>.
    BioMed Central, 2017. <a href="https://doi.org/10.1186/s12862-017-1062-4">https://doi.org/10.1186/s12862-017-1062-4</a>.
  ieee: C. Pull and S. Cremer, “Co-founding ant queens prevent disease by performing
    prophylactic undertaking behaviour,” <i>BMC Evolutionary Biology</i>, vol. 17,
    no. 1. BioMed Central, 2017.
  ista: Pull C, Cremer S. 2017. Co-founding ant queens prevent disease by performing
    prophylactic undertaking behaviour. BMC Evolutionary Biology. 17(1), 219.
  mla: Pull, Christopher, and Sylvia Cremer. “Co-Founding Ant Queens Prevent Disease
    by Performing Prophylactic Undertaking Behaviour.” <i>BMC Evolutionary Biology</i>,
    vol. 17, no. 1, 219, BioMed Central, 2017, doi:<a href="https://doi.org/10.1186/s12862-017-1062-4">10.1186/s12862-017-1062-4</a>.
  short: C. Pull, S. Cremer, BMC Evolutionary Biology 17 (2017).
corr_author: '1'
date_created: 2018-12-11T11:48:12Z
date_published: 2017-10-13T00:00:00Z
date_updated: 2026-04-08T14:19:10Z
day: '13'
ddc:
- '576'
- '592'
department:
- _id: SyCr
doi: 10.1186/s12862-017-1062-4
ec_funded: 1
external_id:
  isi:
  - '000412816800001'
file:
- access_level: open_access
  checksum: 3e24a2cfd48f49f7b3643d08d30fb480
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:17:18Z
  date_updated: 2020-07-14T12:47:55Z
  file_id: '5271'
  file_name: IST-2017-882-v1+1_12862_2017_Article_1062.pdf
  file_size: 949857
  relation: main_file
file_date_updated: 2020-07-14T12:47:55Z
fulldoi: https://doi.org/10.1186/s12862-017-1062-4
has_accepted_license: '1'
intvolume: '        17'
isi: 1
issue: '1'
language:
- iso: eng
month: '10'
oa: 1
oa_version: Published Version
project:
- _id: 25DC711C-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '243071'
  name: 'Social Vaccination in Ant Colonies: from Individual Mechanisms to Society
    Effects'
publication: BMC Evolutionary Biology
publication_identifier:
  issn:
  - 1471-2148
publication_status: published
publisher: BioMed Central
publist_id: '6937'
pubrep_id: '882'
quality_controlled: '1'
related_material:
  record:
  - id: '819'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: Co-founding ant queens prevent disease by performing prophylactic undertaking
  behaviour
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 17
year: '2017'
...
---
_id: '733'
abstract:
- lang: eng
  text: Let A and B be two N by N deterministic Hermitian matrices and let U be an
    N by N Haar distributed unitary matrix. It is well known that the spectral distribution
    of the sum H = A + UBU∗ converges weakly to the free additive convolution of the
    spectral distributions of A and B, as N tends to infinity. We establish the optimal
    convergence rate in the bulk of the spectrum.
acknowledgement: Partially supported by ERC Advanced Grant RANMAT No. 338804, Hong
  Kong RGC grant ECS 26301517, and the Göran Gustafsson Foundation
article_processing_charge: No
arxiv: 1
author:
- first_name: Zhigang
  full_name: Bao, Zhigang
  id: 442E6A6C-F248-11E8-B48F-1D18A9856A87
  last_name: Bao
  orcid: 0000-0003-3036-1475
- first_name: László
  full_name: Erdös, László
  id: 4DBD5372-F248-11E8-B48F-1D18A9856A87
  last_name: Erdös
  orcid: 0000-0001-5366-9603
- first_name: Kevin
  full_name: Schnelli, Kevin
  id: 434AD0AE-F248-11E8-B48F-1D18A9856A87
  last_name: Schnelli
  orcid: 0000-0003-0954-3231
citation:
  ama: Bao Z, Erdös L, Schnelli K. Convergence rate for spectral distribution of addition
    of random matrices. <i>Advances in Mathematics</i>. 2017;319:251-291. doi:<a href="https://doi.org/10.1016/j.aim.2017.08.028">10.1016/j.aim.2017.08.028</a>
  apa: Bao, Z., Erdös, L., &#38; Schnelli, K. (2017). Convergence rate for spectral
    distribution of addition of random matrices. <i>Advances in Mathematics</i>. Academic
    Press. <a href="https://doi.org/10.1016/j.aim.2017.08.028">https://doi.org/10.1016/j.aim.2017.08.028</a>
  chicago: Bao, Zhigang, László Erdös, and Kevin Schnelli. “Convergence Rate for Spectral
    Distribution of Addition of Random Matrices.” <i>Advances in Mathematics</i>.
    Academic Press, 2017. <a href="https://doi.org/10.1016/j.aim.2017.08.028">https://doi.org/10.1016/j.aim.2017.08.028</a>.
  ieee: Z. Bao, L. Erdös, and K. Schnelli, “Convergence rate for spectral distribution
    of addition of random matrices,” <i>Advances in Mathematics</i>, vol. 319. Academic
    Press, pp. 251–291, 2017.
  ista: Bao Z, Erdös L, Schnelli K. 2017. Convergence rate for spectral distribution
    of addition of random matrices. Advances in Mathematics. 319, 251–291.
  mla: Bao, Zhigang, et al. “Convergence Rate for Spectral Distribution of Addition
    of Random Matrices.” <i>Advances in Mathematics</i>, vol. 319, Academic Press,
    2017, pp. 251–91, doi:<a href="https://doi.org/10.1016/j.aim.2017.08.028">10.1016/j.aim.2017.08.028</a>.
  short: Z. Bao, L. Erdös, K. Schnelli, Advances in Mathematics 319 (2017) 251–291.
corr_author: '1'
date_created: 2018-12-11T11:48:13Z
date_published: 2017-10-15T00:00:00Z
date_updated: 2025-06-04T10:13:45Z
day: '15'
department:
- _id: LaEr
doi: 10.1016/j.aim.2017.08.028
ec_funded: 1
external_id:
  arxiv:
  - '1606.03076'
  isi:
  - '000412150400010'
fulldoi: https://doi.org/10.1016/j.aim.2017.08.028
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language:
- iso: eng
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month: '10'
oa: 1
oa_version: Submitted Version
page: 251 - 291
project:
- _id: 258DCDE6-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '338804'
  name: Random matrices, universality and disordered quantum systems
publication: Advances in Mathematics
publication_status: published
publisher: Academic Press
publist_id: '6935'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Convergence rate for spectral distribution of addition of random matrices
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 319
year: '2017'
...
---
_id: '734'
abstract:
- lang: eng
  text: 'Social insect societies are long-standing models for understanding social
    behaviour and evolution. Unlike other advanced biological societies (such as the
    multicellular body), the component parts of social insect societies can be easily
    deconstructed and manipulated. Recent methodological and theoretical innovations
    have exploited this trait to address an expanded range of biological questions.
    We illustrate the broadening range of biological insight coming from social insect
    biology with four examples. These new frontiers promote open-minded, interdisciplinary
    exploration of one of the richest and most complex of biological phenomena: sociality.'
article_processing_charge: No
article_type: original
author:
- first_name: Patrick
  full_name: Kennedy, Patrick
  last_name: Kennedy
- first_name: Gemma
  full_name: Baron, Gemma
  last_name: Baron
- first_name: Bitao
  full_name: Qiu, Bitao
  last_name: Qiu
- first_name: Dalial
  full_name: Freitak, Dalial
  last_name: Freitak
- first_name: Heikki
  full_name: Helantera, Heikki
  last_name: Helantera
- first_name: Edmund
  full_name: Hunt, Edmund
  last_name: Hunt
- first_name: Fabio
  full_name: Manfredini, Fabio
  last_name: Manfredini
- first_name: Thomas
  full_name: O'Shea Wheller, Thomas
  last_name: O'Shea Wheller
- first_name: Solenn
  full_name: Patalano, Solenn
  last_name: Patalano
- first_name: Christopher
  full_name: Pull, Christopher
  id: 3C7F4840-F248-11E8-B48F-1D18A9856A87
  last_name: Pull
  orcid: 0000-0003-1122-3982
- first_name: Takao
  full_name: Sasaki, Takao
  last_name: Sasaki
- first_name: Daisy
  full_name: Taylor, Daisy
  last_name: Taylor
- first_name: Christopher
  full_name: Wyatt, Christopher
  last_name: Wyatt
- first_name: Seirian
  full_name: Sumner, Seirian
  last_name: Sumner
citation:
  ama: Kennedy P, Baron G, Qiu B, et al. Deconstructing superorganisms and societies
    to address big questions in biology. <i>Trends in Ecology and Evolution</i>. 2017;32(11):861-872.
    doi:<a href="https://doi.org/10.1016/j.tree.2017.08.004">10.1016/j.tree.2017.08.004</a>
  apa: Kennedy, P., Baron, G., Qiu, B., Freitak, D., Helantera, H., Hunt, E., … Sumner,
    S. (2017). Deconstructing superorganisms and societies to address big questions
    in biology. <i>Trends in Ecology and Evolution</i>. Cell Press. <a href="https://doi.org/10.1016/j.tree.2017.08.004">https://doi.org/10.1016/j.tree.2017.08.004</a>
  chicago: Kennedy, Patrick, Gemma Baron, Bitao Qiu, Dalial Freitak, Heikki Helantera,
    Edmund Hunt, Fabio Manfredini, et al. “Deconstructing Superorganisms and Societies
    to Address Big Questions in Biology.” <i>Trends in Ecology and Evolution</i>.
    Cell Press, 2017. <a href="https://doi.org/10.1016/j.tree.2017.08.004">https://doi.org/10.1016/j.tree.2017.08.004</a>.
  ieee: P. Kennedy <i>et al.</i>, “Deconstructing superorganisms and societies to
    address big questions in biology,” <i>Trends in Ecology and Evolution</i>, vol.
    32, no. 11. Cell Press, pp. 861–872, 2017.
  ista: Kennedy P, Baron G, Qiu B, Freitak D, Helantera H, Hunt E, Manfredini F, O’Shea
    Wheller T, Patalano S, Pull C, Sasaki T, Taylor D, Wyatt C, Sumner S. 2017. Deconstructing
    superorganisms and societies to address big questions in biology. Trends in Ecology
    and Evolution. 32(11), 861–872.
  mla: Kennedy, Patrick, et al. “Deconstructing Superorganisms and Societies to Address
    Big Questions in Biology.” <i>Trends in Ecology and Evolution</i>, vol. 32, no.
    11, Cell Press, 2017, pp. 861–72, doi:<a href="https://doi.org/10.1016/j.tree.2017.08.004">10.1016/j.tree.2017.08.004</a>.
  short: P. Kennedy, G. Baron, B. Qiu, D. Freitak, H. Helantera, E. Hunt, F. Manfredini,
    T. O’Shea Wheller, S. Patalano, C. Pull, T. Sasaki, D. Taylor, C. Wyatt, S. Sumner,
    Trends in Ecology and Evolution 32 (2017) 861–872.
date_created: 2018-12-11T11:48:13Z
date_published: 2017-11-01T00:00:00Z
date_updated: 2026-04-16T10:07:02Z
day: '01'
ddc:
- '570'
department:
- _id: SyCr
doi: 10.1016/j.tree.2017.08.004
external_id:
  isi:
  - '000413231900011'
file:
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  checksum: c8f49309ed9436201814fa7153d66a99
  content_type: application/pdf
  creator: dernst
  date_created: 2020-05-14T16:22:27Z
  date_updated: 2020-07-14T12:47:56Z
  file_id: '7842'
  file_name: 2017_TrendsEcology_Kennedy.pdf
  file_size: 15018382
  relation: main_file
file_date_updated: 2020-07-14T12:47:56Z
fulldoi: https://doi.org/10.1016/j.tree.2017.08.004
has_accepted_license: '1'
intvolume: '        32'
isi: 1
issue: '11'
language:
- iso: eng
month: '11'
oa: 1
oa_version: Submitted Version
page: 861 - 872
publication: Trends in Ecology and Evolution
publication_identifier:
  issn:
  - 0169-5347
publication_status: published
publisher: Cell Press
publist_id: '6933'
quality_controlled: '1'
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scopus_import: '1'
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title: Deconstructing superorganisms and societies to address big questions in biology
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user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
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...
