---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
PlanS_conform: '1'
_id: '18445'
abstract:
- lang: eng
  text: Acquisition of specialized cellular features is controlled by the ordered
    expression of transcription factors (TFs) along differentiation trajectories.
    Here, we find a member of the Onecut TF family, ONECUT3, expressed in postmitotic
    neurons that leave their Ascl1+/Onecut1/2+ proliferative domain in the vertebrate
    hypothalamus to instruct neuronal differentiation. We combined single-cell RNA-seq
    and gain-of-function experiments for gene network reconstruction to show that
    ONECUT3 affects the polarization and morphogenesis of both hypothalamic GABA-derived
    dopamine and thyrotropin-releasing hormone (TRH)+ glutamate neurons through neuron
    navigator-2 (NAV2). In vivo, siRNA-mediated knockdown of ONECUT3 in neonatal mice
    reduced NAV2 mRNA, as well as neurite complexity in Onecut3-containing neurons,
    while genetic deletion of Onecut3/ceh-48 in C. elegans impaired neurocircuit wiring,
    and sensory discrimination-based behaviors. Thus, ONECUT3, conserved across neuronal
    subtypes and many species, underpins the polarization and morphological plasticity
    of phenotypically distinct neurons that descend from a common pool of Ascl1+ progenitors
    in the hypothalamus.
acknowledgement: "The authors thank Z. Máté, G. Szabó, and F. Erdélyi for the custom
  generation of transgenic mouse lines, C. Fekete for Trh transgenic tissues (all
  from the Institute of Experimental Medicine, Hungarian Academy of Sciences, Budapest,
  Hungary), A. Goudmaeker for IVF recovery of a frozen mouse line (SSS animal facility,
  Université catholique de Louvain), and Y. Yanagawa (Department of Genetic and Behavioral
  Neuroscience, Gunma University Graduate School of Medicine, Maebashi, Japan) for
  providing GAD67gfp/+ mice. We also thank S. Cloer, D. Preininger, and A. Weissenbacher
  (Tiergarten Schönbrunn, Vienna, Austria) for providing naked mole rats, Seba’s fruit
  bats, and Indian flying foxes, as well as F. Aujard (CNRS, UMR 7179 ‘Adaptive mechanisms
  and evolution’, France) for Microcebus tissues. I. Milenkovic and G.G. Kovács (Clinical
  Institute of Neurology, Medical University of Vienna, Vienna, Austria) are acknowledged
  for providing post-mortem human brain samples. We are indebted to S. Rehman (Medical
  University of Vienna), M. Kalusa (University of Leipzig, Leipzig, Germany), and
  W. Reimann (Paul Flechsig Institute for Brain Research, Leipzig, Germany) for their
  technical assistance. C. elegans strains were provided by the National Bioresource
  Project for the nematode, Japan, and the CGC, with the latter being funded by the
  NIH Office of Research Infrastructure Programs (P40 OD010440). This work was supported
  by the Austrian Science Fund (FWF, P 34121-B; to E.K.), the Swedish Research Council
  (2023-03058, T.Ha; 2020-01688, T.Hö.), the Swedish Brain Foundation (Hjärnfonden,
  FO2022-0300, to T.Ha.), the Novo Nordisk Foundation (NNF23OC0084476, to T.Ha.),
  the European Research Council (FOODFORLIFE, ERC-2020-AdG-101021016; to T.Ha.), the
  Université Catholique de Louvain (‘Fonds spéciaux de recherche’-FSR, to F.C.), and
  Fonds de la Recherche Scientifique F.R.S.-FNRS (‘Project de recherche (PDR)’ #T.0039.21,
  to F.C.). S.J.E. is supported by the Simons Foundation #543069. I.L. is supported
  by a post-doctoral fellowship from the Human Frontiers Science Program (LT000335/2020-L).
  E.R. holds a PhD grant from the FRIA (F.R.S.-FNRS, Belgium). F.C. is a Research
  Director of the F.R.S.-FNRS (Belgium).\r\nOpen access funding provided by Karolinska
  Institute."
article_number: '8631'
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Maja
  full_name: Zupančič, Maja
  last_name: Zupančič
- first_name: Erik
  full_name: Keimpema, Erik
  last_name: Keimpema
- first_name: Evgenii O.
  full_name: Tretiakov, Evgenii O.
  last_name: Tretiakov
- first_name: Stephanie J.
  full_name: Eder, Stephanie J.
  last_name: Eder
- first_name: Itamar
  full_name: Lev, Itamar
  last_name: Lev
- first_name: Lukas
  full_name: Englmaier, Lukas
  last_name: Englmaier
- first_name: Pradeep
  full_name: Bhandari, Pradeep
  id: 45EDD1BC-F248-11E8-B48F-1D18A9856A87
  last_name: Bhandari
  orcid: 0000-0003-0863-4481
- first_name: Simone A.
  full_name: Fietz, Simone A.
  last_name: Fietz
- first_name: Wolfgang
  full_name: Härtig, Wolfgang
  last_name: Härtig
- first_name: Estelle
  full_name: Renaux, Estelle
  last_name: Renaux
- first_name: Andreas
  full_name: Villunger, Andreas
  last_name: Villunger
- first_name: Tomas
  full_name: Hökfelt, Tomas
  last_name: Hökfelt
- first_name: Manuel
  full_name: Zimmer, Manuel
  last_name: Zimmer
- first_name: Frédéric
  full_name: Clotman, Frédéric
  last_name: Clotman
- first_name: Tibor
  full_name: Harkany, Tibor
  last_name: Harkany
citation:
  ama: Zupančič M, Keimpema E, Tretiakov EO, et al. Concerted transcriptional regulation
    of the morphogenesis of hypothalamic neurons by ONECUT3. <i>Nature Communications</i>.
    2024;15. doi:<a href="https://doi.org/10.1038/s41467-024-52762-z">10.1038/s41467-024-52762-z</a>
  apa: Zupančič, M., Keimpema, E., Tretiakov, E. O., Eder, S. J., Lev, I., Englmaier,
    L., … Harkany, T. (2024). Concerted transcriptional regulation of the morphogenesis
    of hypothalamic neurons by ONECUT3. <i>Nature Communications</i>. Springer Nature.
    <a href="https://doi.org/10.1038/s41467-024-52762-z">https://doi.org/10.1038/s41467-024-52762-z</a>
  chicago: Zupančič, Maja, Erik Keimpema, Evgenii O. Tretiakov, Stephanie J. Eder,
    Itamar Lev, Lukas Englmaier, Pradeep Bhandari, et al. “Concerted Transcriptional
    Regulation of the Morphogenesis of Hypothalamic Neurons by ONECUT3.” <i>Nature
    Communications</i>. Springer Nature, 2024. <a href="https://doi.org/10.1038/s41467-024-52762-z">https://doi.org/10.1038/s41467-024-52762-z</a>.
  ieee: M. Zupančič <i>et al.</i>, “Concerted transcriptional regulation of the morphogenesis
    of hypothalamic neurons by ONECUT3,” <i>Nature Communications</i>, vol. 15. Springer
    Nature, 2024.
  ista: Zupančič M, Keimpema E, Tretiakov EO, Eder SJ, Lev I, Englmaier L, Bhandari
    P, Fietz SA, Härtig W, Renaux E, Villunger A, Hökfelt T, Zimmer M, Clotman F,
    Harkany T. 2024. Concerted transcriptional regulation of the morphogenesis of
    hypothalamic neurons by ONECUT3. Nature Communications. 15, 8631.
  mla: Zupančič, Maja, et al. “Concerted Transcriptional Regulation of the Morphogenesis
    of Hypothalamic Neurons by ONECUT3.” <i>Nature Communications</i>, vol. 15, 8631,
    Springer Nature, 2024, doi:<a href="https://doi.org/10.1038/s41467-024-52762-z">10.1038/s41467-024-52762-z</a>.
  short: M. Zupančič, E. Keimpema, E.O. Tretiakov, S.J. Eder, I. Lev, L. Englmaier,
    P. Bhandari, S.A. Fietz, W. Härtig, E. Renaux, A. Villunger, T. Hökfelt, M. Zimmer,
    F. Clotman, T. Harkany, Nature Communications 15 (2024).
das_tickbox: '1'
dataavailabilitystatement: The snRNA-seq data generated in this study have been deposited
  in the NCBI Gene Expression Omnibus database under accession code GSE132730 and
  as ‘Supplementary Data 1 - Neuro2a-onecut3-overexpression’. All other primary data
  were made publically available at https://github.com/Harkany-Lab/Zupancic_2023 and
  deposited to Figshare.com with https://doi.org/10.6084/m9.figshare.22680433. Source
  data are provided with this paper.
date_created: 2024-10-20T22:02:05Z
date_published: 2024-10-05T00:00:00Z
date_updated: 2026-09-17T11:26:03Z
day: '05'
ddc:
- '570'
department:
- _id: RySh
doi: 10.1038/s41467-024-52762-z
external_id:
  isi:
  - '001409493300014'
  pmid:
  - '39366958'
file:
- access_level: open_access
  checksum: 03d6dd1b84efa24e9e9ede748d08764d
  content_type: application/pdf
  creator: dernst
  date_created: 2024-10-21T12:15:38Z
  date_updated: 2024-10-21T12:15:38Z
  file_id: '18460'
  file_name: 2024_NatureComm_Zupancic.pdf
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  relation: main_file
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file_date_updated: 2024-10-21T12:15:38Z
fulldoi: https://doi.org/10.1038/s41467-024-52762-z
has_accepted_license: '1'
intvolume: '        15'
isi: 1
language:
- iso: eng
month: '10'
oa: 1
oa_version: Published Version
pmid: 1
publication: Nature Communications
publication_identifier:
  eissn:
  - 2041-1723
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
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    relation: research_data
    status: for_moderation
researchdata_availability: yes
scopus_import: '1'
status: public
supplementarymaterial: yes
title: Concerted transcriptional regulation of the morphogenesis of hypothalamic neurons
  by ONECUT3
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 15
year: '2024'
...
---
APC_amount: 5887,8 EUR
OA_place: publisher
OA_type: hybrid
_id: '15084'
abstract:
- lang: eng
  text: "GABAB receptor (GBR) activation inhibits neurotransmitter release in axon
    terminals in the brain, except in medial habenula (MHb) terminals, which show
    robust potentiation. However, mechanisms underlying this enigmatic potentiation
    remain elusive. Here, we report that GBR activation on MHb terminals induces an
    activity-dependent transition from a facilitating, tonic to a depressing, phasic
    neurotransmitter release mode. This transition is accompanied by a 4.1-fold increase
    in readily releasable vesicle pool (RRP) size and a 3.5-fold increase of docked
    synaptic vesicles (SVs) at the presynaptic active zone (AZ). Strikingly, the depressing
    phasic release exhibits looser coupling distance than the tonic release. Furthermore,
    the tonic and phasic release are selectively affected by deletion of synaptoporin
    (SPO) and Ca\r\n            <jats:sup>2+</jats:sup>\r\n            -dependent
    activator protein for secretion 2 (CAPS2), respectively. SPO modulates augmentation,
    the short-term plasticity associated with tonic release, and CAPS2 retains the
    increased RRP for initial responses in phasic response trains. The cytosolic protein
    CAPS2 showed a SV-associated distribution similar to the vesicular transmembrane
    protein SPO, and they were colocalized in the same terminals. We developed the
    “Flash and Freeze-fracture” method, and revealed the release of SPO-associated
    vesicles in both tonic and phasic modes and activity-dependent recruitment of
    CAPS2 to the AZ during phasic release, which lasted several minutes. Overall,
    these results indicate that GBR activation translocates CAPS2 to the AZ along
    with the fusion of CAPS2-associated SVs, contributing to persistency of the RRP
    increase. Thus, we identified structural and molecular mechanisms underlying tonic
    and phasic neurotransmitter release and their transition by GBR activation in
    MHb terminals."
acknowledged_ssus:
- _id: M-Shop
- _id: PreCl
- _id: EM-Fac
acknowledgement: We thank Erwin Neher and Ipe Ninan for critical comments on the manuscript.
  This project has received funding from the European Research Council (ERC) and European
  Commission, under the European Union’s Horizon 2020 research and innovation program
  (ERC grant agreement no. 694539 to R.S. and the Marie Skłodowska-Curie grant agreement
  no. 665385 to C.Ö.). This study was supported by the Cooperative Study Program of
  Center for Animal Resources and Collaborative Study of NINS. We thank Kohgaku Eguchi
  for statistical analysis, Yu Kasugai for additional EM imaging, Robert Beattie for
  the design of the slice recovery chamber for Flash and Freeze experiments, Todor
  Asenov from the ISTA machine shop for custom part preparations for high-pressure
  freezing, the ISTA preclinical facility for animal caretaking, and the ISTA EM facilities
  for technical support.
article_number: e2301449121
article_processing_charge: Yes (in subscription journal)
article_type: original
author:
- first_name: Peter
  full_name: Koppensteiner, Peter
  id: 3B8B25A8-F248-11E8-B48F-1D18A9856A87
  last_name: Koppensteiner
  orcid: 0000-0002-3509-1948
- first_name: Pradeep
  full_name: Bhandari, Pradeep
  id: 45EDD1BC-F248-11E8-B48F-1D18A9856A87
  last_name: Bhandari
  orcid: 0000-0003-0863-4481
- first_name: Hüseyin C
  full_name: Önal, Hüseyin C
  id: 4659D740-F248-11E8-B48F-1D18A9856A87
  last_name: Önal
  orcid: 0000-0002-2771-2011
- first_name: Carolina
  full_name: Borges Merjane, Carolina
  id: 4305C450-F248-11E8-B48F-1D18A9856A87
  last_name: Borges Merjane
  orcid: 0000-0003-0005-401X
- first_name: Elodie
  full_name: Le Monnier, Elodie
  id: 3B59276A-F248-11E8-B48F-1D18A9856A87
  last_name: Le Monnier
- first_name: Utsa
  full_name: Roy, Utsa
  id: 4d26cf11-5355-11ee-ae5a-eb05e255b9b2
  last_name: Roy
- first_name: Yukihiro
  full_name: Nakamura, Yukihiro
  last_name: Nakamura
- first_name: Tetsushi
  full_name: Sadakata, Tetsushi
  last_name: Sadakata
- first_name: Makoto
  full_name: Sanbo, Makoto
  last_name: Sanbo
- first_name: Masumi
  full_name: Hirabayashi, Masumi
  last_name: Hirabayashi
- first_name: JeongSeop
  full_name: Rhee, JeongSeop
  last_name: Rhee
- first_name: Nils
  full_name: Brose, Nils
  last_name: Brose
- first_name: Peter M
  full_name: Jonas, Peter M
  id: 353C1B58-F248-11E8-B48F-1D18A9856A87
  last_name: Jonas
  orcid: 0000-0001-5001-4804
- first_name: Ryuichi
  full_name: Shigemoto, Ryuichi
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
citation:
  ama: Koppensteiner P, Bhandari P, Önal C, et al. GABAB receptors induce phasic release
    from medial habenula terminals through activity-dependent recruitment of release-ready
    vesicles. <i>Proceedings of the National Academy of Sciences of the United States
    of America</i>. 2024;121(8). doi:<a href="https://doi.org/10.1073/pnas.2301449121">10.1073/pnas.2301449121</a>
  apa: Koppensteiner, P., Bhandari, P., Önal, C., Borges Merjane, C., Le Monnier,
    E., Roy, U., … Shigemoto, R. (2024). GABAB receptors induce phasic release from
    medial habenula terminals through activity-dependent recruitment of release-ready
    vesicles. <i>Proceedings of the National Academy of Sciences of the United States
    of America</i>. National Academy of Sciences. <a href="https://doi.org/10.1073/pnas.2301449121">https://doi.org/10.1073/pnas.2301449121</a>
  chicago: Koppensteiner, Peter, Pradeep Bhandari, Cihan Önal, Carolina Borges Merjane,
    Elodie Le Monnier, Utsa Roy, Yukihiro Nakamura, et al. “GABAB Receptors Induce
    Phasic Release from Medial Habenula Terminals through Activity-Dependent Recruitment
    of Release-Ready Vesicles.” <i>Proceedings of the National Academy of Sciences
    of the United States of America</i>. National Academy of Sciences, 2024. <a href="https://doi.org/10.1073/pnas.2301449121">https://doi.org/10.1073/pnas.2301449121</a>.
  ieee: P. Koppensteiner <i>et al.</i>, “GABAB receptors induce phasic release from
    medial habenula terminals through activity-dependent recruitment of release-ready
    vesicles,” <i>Proceedings of the National Academy of Sciences of the United States
    of America</i>, vol. 121, no. 8. National Academy of Sciences, 2024.
  ista: Koppensteiner P, Bhandari P, Önal C, Borges Merjane C, Le Monnier E, Roy U,
    Nakamura Y, Sadakata T, Sanbo M, Hirabayashi M, Rhee J, Brose N, Jonas PM, Shigemoto
    R. 2024. GABAB receptors induce phasic release from medial habenula terminals
    through activity-dependent recruitment of release-ready vesicles. Proceedings
    of the National Academy of Sciences of the United States of America. 121(8), e2301449121.
  mla: Koppensteiner, Peter, et al. “GABAB Receptors Induce Phasic Release from Medial
    Habenula Terminals through Activity-Dependent Recruitment of Release-Ready Vesicles.”
    <i>Proceedings of the National Academy of Sciences of the United States of America</i>,
    vol. 121, no. 8, e2301449121, National Academy of Sciences, 2024, doi:<a href="https://doi.org/10.1073/pnas.2301449121">10.1073/pnas.2301449121</a>.
  short: P. Koppensteiner, P. Bhandari, C. Önal, C. Borges Merjane, E. Le Monnier,
    U. Roy, Y. Nakamura, T. Sadakata, M. Sanbo, M. Hirabayashi, J. Rhee, N. Brose,
    P.M. Jonas, R. Shigemoto, Proceedings of the National Academy of Sciences of the
    United States of America 121 (2024).
corr_author: '1'
date_created: 2024-03-05T09:23:55Z
date_published: 2024-02-20T00:00:00Z
date_updated: 2026-09-29T22:30:36Z
day: '20'
ddc:
- '570'
department:
- _id: RySh
- _id: PeJo
doi: 10.1073/pnas.2301449121
ec_funded: 1
external_id:
  isi:
  - '001208567300006'
  pmid:
  - '38346189'
file:
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  date_created: 2024-03-12T13:42:42Z
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  file_id: '15110'
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file_date_updated: 2024-03-12T13:42:42Z
fulldoi: https://doi.org/10.1073/pnas.2301449121
has_accepted_license: '1'
intvolume: '       121'
isi: 1
issue: '8'
language:
- iso: eng
license: https://creativecommons.org/licenses/by-nc-nd/4.0/
month: '02'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 25CA28EA-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '694539'
  name: 'In situ analysis of single channel subunit composition in neurons: physiological
    implication in synaptic plasticity and behaviour'
- _id: 2564DBCA-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '665385'
  name: International IST Doctoral Program
publication: Proceedings of the National Academy of Sciences of the United States
  of America
publication_identifier:
  eissn:
  - 1091-6490
  issn:
  - 0027-8424
publication_status: published
publisher: National Academy of Sciences
quality_controlled: '1'
related_material:
  link:
  - description: News on ISTA Website
    relation: press_release
    url: https://ista.ac.at/en/news/neuronal-insights-flash-and-freeze-fracture/
  record:
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scopus_import: '1'
status: public
title: GABAB receptors induce phasic release from medial habenula terminals through
  activity-dependent recruitment of release-ready vesicles
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 121
year: '2024'
...
---
_id: '14253'
abstract:
- lang: eng
  text: Junctions between the endoplasmic reticulum (ER) and the plasma membrane (PM)
    are specialized membrane contacts ubiquitous in eukaryotic cells. Concentration
    of intracellular signaling machinery near ER-PM junctions allows these domains
    to serve critical roles in lipid and Ca2+ signaling and homeostasis. Subcellular
    compartmentalization of protein kinase A (PKA) signaling also regulates essential
    cellular functions, however, no specific association between PKA and ER-PM junctional
    domains is known. Here, we show that in brain neurons type I PKA is directed to
    Kv2.1 channel-dependent ER-PM junctional domains via SPHKAP, a type I PKA-specific
    anchoring protein. SPHKAP association with type I PKA regulatory subunit RI and
    ER-resident VAP proteins results in the concentration of type I PKA between stacked
    ER cisternae associated with ER-PM junctions. This ER-associated PKA signalosome
    enables reciprocal regulation between PKA and Ca2+ signaling machinery to support
    Ca2+ influx and excitation-transcription coupling. These data reveal that neuronal
    ER-PM junctions support a receptor-independent form of PKA signaling driven by
    membrane depolarization and intracellular Ca2+, allowing conversion of information
    encoded in electrical signals into biochemical changes universally recognized
    throughout the cell.
acknowledgement: We thank Kayla Templeton and Peter Turcanu for technical assistance,
  Michelle Salemi for assistance with LC-MS data acquisition and analysis, Dr. Belvin
  Gong for advice on monoclonal antibody generation, Drs. Maria Casas Prat and Eamonn
  Dickson for assistance with super-resolution TIRF microscopy, Dr. Oscar Cerda for
  assistance with the design of TAT-FFAT peptides, Dr. Fernando Santana for helpful
  discussions, and Dr. Jodi Nunnari for a careful reading of our manuscript. We also
  thank Dr. Alan Howe, Dr. Sohum Mehta, and Dr. Jin Zhang for providing plasmids used
  in this study. This project was funded by NIH Grants R01NS114210 and R21NS101648
  (J.S.T.), and F32NS108519 (N.C.V.).
article_number: '5231'
article_processing_charge: Yes
article_type: original
author:
- first_name: Nicholas C.
  full_name: Vierra, Nicholas C.
  last_name: Vierra
- first_name: Luisa
  full_name: Ribeiro-Silva, Luisa
  last_name: Ribeiro-Silva
- first_name: Michael
  full_name: Kirmiz, Michael
  last_name: Kirmiz
- first_name: Deborah
  full_name: Van Der List, Deborah
  last_name: Van Der List
- first_name: Pradeep
  full_name: Bhandari, Pradeep
  id: 45EDD1BC-F248-11E8-B48F-1D18A9856A87
  last_name: Bhandari
  orcid: 0000-0003-0863-4481
- first_name: Olivia A.
  full_name: Mack, Olivia A.
  last_name: Mack
- first_name: James
  full_name: Carroll, James
  last_name: Carroll
- first_name: Elodie
  full_name: Le Monnier, Elodie
  id: 3B59276A-F248-11E8-B48F-1D18A9856A87
  last_name: Le Monnier
- first_name: Sue A.
  full_name: Aicher, Sue A.
  last_name: Aicher
- first_name: Ryuichi
  full_name: Shigemoto, Ryuichi
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: James S.
  full_name: Trimmer, James S.
  last_name: Trimmer
citation:
  ama: Vierra NC, Ribeiro-Silva L, Kirmiz M, et al. Neuronal ER-plasma membrane junctions
    couple excitation to Ca2+-activated PKA signaling. <i>Nature Communications</i>.
    2023;14. doi:<a href="https://doi.org/10.1038/s41467-023-40930-6">10.1038/s41467-023-40930-6</a>
  apa: Vierra, N. C., Ribeiro-Silva, L., Kirmiz, M., Van Der List, D., Bhandari, P.,
    Mack, O. A., … Trimmer, J. S. (2023). Neuronal ER-plasma membrane junctions couple
    excitation to Ca2+-activated PKA signaling. <i>Nature Communications</i>. Springer
    Nature. <a href="https://doi.org/10.1038/s41467-023-40930-6">https://doi.org/10.1038/s41467-023-40930-6</a>
  chicago: Vierra, Nicholas C., Luisa Ribeiro-Silva, Michael Kirmiz, Deborah Van Der
    List, Pradeep Bhandari, Olivia A. Mack, James Carroll, et al. “Neuronal ER-Plasma
    Membrane Junctions Couple Excitation to Ca2+-Activated PKA Signaling.” <i>Nature
    Communications</i>. Springer Nature, 2023. <a href="https://doi.org/10.1038/s41467-023-40930-6">https://doi.org/10.1038/s41467-023-40930-6</a>.
  ieee: N. C. Vierra <i>et al.</i>, “Neuronal ER-plasma membrane junctions couple
    excitation to Ca2+-activated PKA signaling,” <i>Nature Communications</i>, vol.
    14. Springer Nature, 2023.
  ista: Vierra NC, Ribeiro-Silva L, Kirmiz M, Van Der List D, Bhandari P, Mack OA,
    Carroll J, Le Monnier E, Aicher SA, Shigemoto R, Trimmer JS. 2023. Neuronal ER-plasma
    membrane junctions couple excitation to Ca2+-activated PKA signaling. Nature Communications.
    14, 5231.
  mla: Vierra, Nicholas C., et al. “Neuronal ER-Plasma Membrane Junctions Couple Excitation
    to Ca2+-Activated PKA Signaling.” <i>Nature Communications</i>, vol. 14, 5231,
    Springer Nature, 2023, doi:<a href="https://doi.org/10.1038/s41467-023-40930-6">10.1038/s41467-023-40930-6</a>.
  short: N.C. Vierra, L. Ribeiro-Silva, M. Kirmiz, D. Van Der List, P. Bhandari, O.A.
    Mack, J. Carroll, E. Le Monnier, S.A. Aicher, R. Shigemoto, J.S. Trimmer, Nature
    Communications 14 (2023).
date_created: 2023-09-03T22:01:14Z
date_published: 2023-08-26T00:00:00Z
date_updated: 2025-09-09T12:50:49Z
day: '26'
ddc:
- '570'
department:
- _id: RySh
doi: 10.1038/s41467-023-40930-6
external_id:
  isi:
  - '001064563400013'
  pmid:
  - '37633939'
file:
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  creator: dernst
  date_created: 2023-09-06T06:50:07Z
  date_updated: 2023-09-06T06:50:07Z
  file_id: '14270'
  file_name: 2023_NatureComm_Vierra.pdf
  file_size: 9412549
  relation: main_file
  success: 1
file_date_updated: 2023-09-06T06:50:07Z
fulldoi: https://doi.org/10.1038/s41467-023-40930-6
has_accepted_license: '1'
intvolume: '        14'
isi: 1
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
pmid: 1
publication: Nature Communications
publication_identifier:
  eissn:
  - 2041-1723
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Neuronal ER-plasma membrane junctions couple excitation to Ca2+-activated PKA
  signaling
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 14
year: '2023'
...
---
_id: '9437'
abstract:
- lang: eng
  text: The synaptic connection from medial habenula (MHb) to interpeduncular nucleus
    (IPN) is critical for emotion-related behaviors and uniquely expresses R-type
    Ca2+ channels (Cav2.3) and auxiliary GABAB receptor (GBR) subunits, the K+-channel
    tetramerization domain-containing proteins (KCTDs). Activation of GBRs facilitates
    or inhibits transmitter release from MHb terminals depending on the IPN subnucleus,
    but the role of KCTDs is unknown. We therefore examined the localization and function
    of Cav2.3, GBRs, and KCTDs in this pathway in mice. We show in heterologous cells
    that KCTD8 and KCTD12b directly bind to Cav2.3 and that KCTD8 potentiates Cav2.3
    currents in the absence of GBRs. In the rostral IPN, KCTD8, KCTD12b, and Cav2.3
    co-localize at the presynaptic active zone. Genetic deletion indicated a bidirectional
    modulation of Cav2.3-mediated release by these KCTDs with a compensatory increase
    of KCTD8 in the active zone in KCTD12b-deficient mice. The interaction of Cav2.3
    with KCTDs therefore scales synaptic strength independent of GBR activation.
acknowledgement: We are grateful to Akari Hagiwara and Toshihisa Ohtsuka for CAST
  antibody, and Masahiko Watanabe for neurexin antibody. We thank David Adams for
  kindly providing the stable Cav2.3 cell line. Cav2.3 KO mice were kindly provided
  by Tsutomu Tanabe. This project has received funding from the European Research
  Council (ERC) and European Commission (EC), under the European Union’s Horizon 2020
  research and innovation programme (ERC grant agreement no. 694539 to Ryuichi Shigemoto,
  no. 692692 to Peter Jonas, and the Marie Skłodowska-Curie grant agreement no. 665385
  to Cihan Önal), the Swiss National Science Foundation Grant 31003A-172881 to Bernhard
  Bettler and Deutsche Forschungsgemeinschaft (For 2143) and BIOSS-2 to Akos Kulik.
article_number: e68274
article_processing_charge: No
article_type: original
author:
- first_name: Pradeep
  full_name: Bhandari, Pradeep
  id: 45EDD1BC-F248-11E8-B48F-1D18A9856A87
  last_name: Bhandari
  orcid: 0000-0003-0863-4481
- first_name: David H
  full_name: Vandael, David H
  id: 3AE48E0A-F248-11E8-B48F-1D18A9856A87
  last_name: Vandael
  orcid: 0000-0001-7577-1676
- first_name: Diego
  full_name: Fernández-Fernández, Diego
  last_name: Fernández-Fernández
- first_name: Thorsten
  full_name: Fritzius, Thorsten
  last_name: Fritzius
- first_name: David
  full_name: Kleindienst, David
  id: 42E121A4-F248-11E8-B48F-1D18A9856A87
  last_name: Kleindienst
- first_name: Hüseyin C
  full_name: Önal, Hüseyin C
  id: 4659D740-F248-11E8-B48F-1D18A9856A87
  last_name: Önal
  orcid: 0000-0002-2771-2011
- first_name: Jacqueline-Claire
  full_name: Montanaro-Punzengruber, Jacqueline-Claire
  id: 3786AB44-F248-11E8-B48F-1D18A9856A87
  last_name: Montanaro-Punzengruber
- first_name: Martin
  full_name: Gassmann, Martin
  last_name: Gassmann
- first_name: Peter M
  full_name: Jonas, Peter M
  id: 353C1B58-F248-11E8-B48F-1D18A9856A87
  last_name: Jonas
  orcid: 0000-0001-5001-4804
- first_name: Akos
  full_name: Kulik, Akos
  last_name: Kulik
- first_name: Bernhard
  full_name: Bettler, Bernhard
  last_name: Bettler
- first_name: Ryuichi
  full_name: Shigemoto, Ryuichi
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: Peter
  full_name: Koppensteiner, Peter
  id: 3B8B25A8-F248-11E8-B48F-1D18A9856A87
  last_name: Koppensteiner
  orcid: 0000-0002-3509-1948
citation:
  ama: Bhandari P, Vandael DH, Fernández-Fernández D, et al. GABAB receptor auxiliary
    subunits modulate Cav2.3-mediated release from medial habenula terminals. <i>eLife</i>.
    2021;10. doi:<a href="https://doi.org/10.7554/ELIFE.68274">10.7554/ELIFE.68274</a>
  apa: Bhandari, P., Vandael, D. H., Fernández-Fernández, D., Fritzius, T., Kleindienst,
    D., Önal, C., … Koppensteiner, P. (2021). GABAB receptor auxiliary subunits modulate
    Cav2.3-mediated release from medial habenula terminals. <i>ELife</i>. eLife Sciences
    Publications. <a href="https://doi.org/10.7554/ELIFE.68274">https://doi.org/10.7554/ELIFE.68274</a>
  chicago: Bhandari, Pradeep, David H Vandael, Diego Fernández-Fernández, Thorsten
    Fritzius, David Kleindienst, Cihan Önal, Jacqueline-Claire Montanaro-Punzengruber,
    et al. “GABAB Receptor Auxiliary Subunits Modulate Cav2.3-Mediated Release from
    Medial Habenula Terminals.” <i>ELife</i>. eLife Sciences Publications, 2021. <a
    href="https://doi.org/10.7554/ELIFE.68274">https://doi.org/10.7554/ELIFE.68274</a>.
  ieee: P. Bhandari <i>et al.</i>, “GABAB receptor auxiliary subunits modulate Cav2.3-mediated
    release from medial habenula terminals,” <i>eLife</i>, vol. 10. eLife Sciences
    Publications, 2021.
  ista: Bhandari P, Vandael DH, Fernández-Fernández D, Fritzius T, Kleindienst D,
    Önal C, Montanaro-Punzengruber J-C, Gassmann M, Jonas PM, Kulik A, Bettler B,
    Shigemoto R, Koppensteiner P. 2021. GABAB receptor auxiliary subunits modulate
    Cav2.3-mediated release from medial habenula terminals. eLife. 10, e68274.
  mla: Bhandari, Pradeep, et al. “GABAB Receptor Auxiliary Subunits Modulate Cav2.3-Mediated
    Release from Medial Habenula Terminals.” <i>ELife</i>, vol. 10, e68274, eLife
    Sciences Publications, 2021, doi:<a href="https://doi.org/10.7554/ELIFE.68274">10.7554/ELIFE.68274</a>.
  short: P. Bhandari, D.H. Vandael, D. Fernández-Fernández, T. Fritzius, D. Kleindienst,
    C. Önal, J.-C. Montanaro-Punzengruber, M. Gassmann, P.M. Jonas, A. Kulik, B. Bettler,
    R. Shigemoto, P. Koppensteiner, ELife 10 (2021).
date_created: 2021-05-30T22:01:23Z
date_published: 2021-04-29T00:00:00Z
date_updated: 2026-09-29T22:31:02Z
day: '29'
ddc:
- '570'
department:
- _id: RySh
- _id: PeJo
doi: 10.7554/ELIFE.68274
ec_funded: 1
external_id:
  isi:
  - '000651761700001'
  pmid:
  - '33913808'
file:
- access_level: open_access
  checksum: 6ebcb79999f889766f7cd79ee134ad28
  content_type: application/pdf
  creator: cziletti
  date_created: 2021-05-31T09:43:09Z
  date_updated: 2021-05-31T09:43:09Z
  file_id: '9440'
  file_name: 2021_eLife_Bhandari.pdf
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  success: 1
file_date_updated: 2021-05-31T09:43:09Z
fulldoi: https://doi.org/10.7554/ELIFE.68274
has_accepted_license: '1'
intvolume: '        10'
isi: 1
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 25CA28EA-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '694539'
  name: 'In situ analysis of single channel subunit composition in neurons: physiological
    implication in synaptic plasticity and behaviour'
- _id: 25B7EB9E-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '692692'
  name: Biophysics and circuit function of a giant cortical glutamatergic synapse
- _id: 2564DBCA-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '665385'
  name: International IST Doctoral Program
publication: eLife
publication_identifier:
  eissn:
  - 2050-084X
publication_status: published
publisher: eLife Sciences Publications
quality_controlled: '1'
related_material:
  link:
  - relation: earlier_version
    url: https://doi.org/10.1101/2020.04.16.045112
  record:
  - id: '19271'
    relation: dissertation_contains
    status: public
  - id: '9562'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: GABAB receptor auxiliary subunits modulate Cav2.3-mediated release from medial
  habenula terminals
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 10
year: '2021'
...
---
OA_place: publisher
_id: '7525'
abstract:
- lang: eng
  text: "The medial habenula (MHb) is an evolutionary conserved epithalamic structure
    important for the modulation of emotional memory. It is involved in regulation
    of anxiety, compulsive behavior, addiction (nicotinic and opioid), sexual and
    feeding behavior. MHb receives inputs from septal regions and projects exclusively
    to the interpeduncular nucleus (IPN). Distinct sub-regions of the septum project
    to different subnuclei of MHb: the bed nucleus of anterior commissure projects
    to dorsal MHb and the triangular septum projects to ventral MHb. Furthermore,
    the dorsal and ventral MHb project to the lateral and rostral/central IPN, respectively.
    Importantly, these projections have unique features of prominent co-release of
    different neurotransmitters and requirement of a peculiar type of calcium channel
    for release. In general, synaptic neurotransmission requires an activity-dependent
    influx of Ca2+ into the presynaptic terminal through voltage-gated calcium channels.
    The calcium channel family most commonly involved in neurotransmitter release
    comprises three members, P/Q-, N- and R-type with Cav2.1, Cav2.2 and Cav2.3 subunits,
    respectively. In contrast to most CNS synapses that mainly express Cav2.1 and/or
    Cav2.2, MHb terminals in the IPN exclusively express Cav2.3. In other parts of
    the brain, such as the hippocampus, Cav2.3 is mostly located to postsynaptic elements.
    This unusual presynaptic location of Cav2.3 in the MHb-IPN pathway implies unique
    mechanisms of glutamate release in this pathway. One potential example of such
    uniqueness is the facilitation of release by GABAB receptor (GBR) activation.
    Presynaptic GBRs usually inhibit the release of neurotransmitters by inhibiting
    presynaptic calcium channels. MHb shows the highest expression levels of GBR in
    the brain. GBRs comprise two subunits, GABAB1 (GB1) and GABAB2 (GB2), and are
    associated with auxiliary subunits, called potassium channel tetramerization domain
    containing proteins (KCTD) 8, 12, 12b and 16. Among these four subunits, KCTD12b
    is exclusively expressed in ventral MHb, and KCTD8 shows the strongest expression
    in the whole MHb among other brain regions, indicating that KCTD8 and KCTD12b
    may be involved in the unique mechanisms of neurotransmitter release mediated
    by Cav2.3 and regulated by GBRs in this pathway. \r\nIn the present study, we
    first verified that neurotransmission in both dorsal and ventral MHb-IPN pathways
    is mainly mediated by Cav2.3 using a selective blocker of R-type channels, SNX-482.
    We next found that baclofen, a GBR agonist, has facilitatory effects on release
    from ventral MHb terminal in rostral IPN, whereas it has inhibitory effects on
    release from dorsal MHb terminals in lateral IPN, indicating that KCTD12b expressed
    exclusively in ventral MHb may have a role in the facilitatory effects of GBR
    activation. In a heterologous expression system using HEK cells, we found that
    KCTD8 and KCTD12b but not KCTD12 directly bind with Cav2.3. Pre-embedding immunogold
    electron microscopy data show that Cav2.3 and KCTD12b are distributed most densely
    in presynaptic active zone in IPN with KCTD12b being present only in rostral/central
    but not lateral IPN, whereas GABAB, KCTD8 and KCTD12 are distributed most densely
    in perisynaptic sites with KCTD12 present more frequently in postsynaptic elements
    and only in rostral/central IPN. In freeze-fracture replica labelling, Cav2.3,
    KCTD8 and KCTD12b are co-localized with each other in the same active zone indicating
    that they may form complexes regulating vesicle release in rostral IPN. \r\nOn
    electrophysiological studies of wild type (WT) mice, we found that paired-pulse
    ratio in rostral IPN of KCTD12b knock-out (KO) mice is lower than those of WT
    and KCTD8 KO mice. Consistent with this finding, in mean variance analysis, release
    probability in rostral IPN of KCTD12b KO mice is higher than that of WT and KCTD8
    KO mice. Although paired-pulse ratios are not different between WT and KCTD8 KO
    mice, the mean variance analysis revealed significantly lower release probability
    in rostral IPN of KCTD8 KO than WT mice. These results demonstrate bidirectional
    regulation of Cav2.3-mediated release by KCTD8 and KCTD12b without GBR activation
    in rostral IPN. Finally, we examined the baclofen effects in rostral IPN of KCTD8
    and KCTD12b KO mice, and found the facilitation of release remained in both KO
    mice, indicating that the peculiar effects of the GBR activation in this pathway
    do not depend on the selective expression of these KCTD subunits in ventral MHb.
    However, we found that presynaptic potentiation of evoked EPSC amplitude by baclofen
    falls to baseline after washout faster in KCTD12b KO mice than WT, KCTD8 KO and
    KCTD8/12b double KO mice. This result indicates that KCTD12b is involved in sustained
    potentiation of vesicle release by GBR activation, whereas KCTD8 is involved in
    its termination in the absence of KCTD12b. Consistent with these functional findings,
    replica labelling revealed an increase in density of KCTD8, but not Cav2.3 or
    GBR at active zone in rostral IPN of KCTD12b KO mice compared with that of WT
    mice, suggesting that increased association of KCTD8 with Cav2.3 facilitates the
    release probability and termination of the GBR effect in the absence of KCTD12b.\r\nIn
    summary, our study provided new insights into the physiological roles of presynaptic
    Cav2.3, GBRs and their auxiliary subunits KCTDs at an evolutionary conserved neuronal
    circuit. Future studies will be required to identify the exact molecular mechanism
    underlying the GBR-mediated presynaptic potentiation on ventral MHb terminals.
    It remains to be determined whether the prominent presence of presynaptic KCTDs
    at active zone could exert similar neuromodulatory functions in different pathways
    of the brain.\r\n"
acknowledged_ssus:
- _id: EM-Fac
alternative_title:
- ISTA Thesis
article_processing_charge: No
author:
- first_name: Pradeep
  full_name: Bhandari, Pradeep
  id: 45EDD1BC-F248-11E8-B48F-1D18A9856A87
  last_name: Bhandari
  orcid: 0000-0003-0863-4481
citation:
  ama: Bhandari P. Localization and functional role of Cav2.3 in the medial habenula
    to interpeduncular nucleus pathway. 2020. doi:<a href="https://doi.org/10.15479/AT:ISTA:7525">10.15479/AT:ISTA:7525</a>
  apa: Bhandari, P. (2020). <i>Localization and functional role of Cav2.3 in the medial
    habenula to interpeduncular nucleus pathway</i>. Institute of Science and Technology
    Austria. <a href="https://doi.org/10.15479/AT:ISTA:7525">https://doi.org/10.15479/AT:ISTA:7525</a>
  chicago: Bhandari, Pradeep. “Localization and Functional Role of Cav2.3 in the Medial
    Habenula to Interpeduncular Nucleus Pathway.” Institute of Science and Technology
    Austria, 2020. <a href="https://doi.org/10.15479/AT:ISTA:7525">https://doi.org/10.15479/AT:ISTA:7525</a>.
  ieee: P. Bhandari, “Localization and functional role of Cav2.3 in the medial habenula
    to interpeduncular nucleus pathway,” Institute of Science and Technology Austria,
    2020.
  ista: Bhandari P. 2020. Localization and functional role of Cav2.3 in the medial
    habenula to interpeduncular nucleus pathway. Institute of Science and Technology
    Austria.
  mla: Bhandari, Pradeep. <i>Localization and Functional Role of Cav2.3 in the Medial
    Habenula to Interpeduncular Nucleus Pathway</i>. Institute of Science and Technology
    Austria, 2020, doi:<a href="https://doi.org/10.15479/AT:ISTA:7525">10.15479/AT:ISTA:7525</a>.
  short: P. Bhandari, Localization and Functional Role of Cav2.3 in the Medial Habenula
    to Interpeduncular Nucleus Pathway, Institute of Science and Technology Austria,
    2020.
corr_author: '1'
date_created: 2020-02-26T10:56:37Z
date_published: 2020-02-28T00:00:00Z
date_updated: 2026-04-08T07:27:27Z
day: '28'
ddc:
- '570'
degree_awarded: PhD
department:
- _id: RySh
doi: 10.15479/AT:ISTA:7525
file:
- access_level: open_access
  checksum: 4589234fdb12b4ad72273b311723a7b4
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  creator: pbhandari
  date_created: 2020-02-28T08:37:53Z
  date_updated: 2021-03-01T23:30:04Z
  embargo: 2021-02-28
  file_id: '7538'
  file_name: Pradeep Bhandari Thesis.pdf
  file_size: 9646346
  relation: main_file
  title: Localization and functional role of Cav2.3 in the medial habenula to interpeduncular
    nucleus pathway
- access_level: closed
  checksum: aa79490553ca0a5c9b6fbcd152e93928
  content_type: application/vnd.openxmlformats-officedocument.wordprocessingml.document
  creator: pbhandari
  date_created: 2020-02-28T08:47:14Z
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  file_size: 35252164
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  title: Localization and functional role of Cav2.3 in the medial habenula to interpeduncular
    nucleus pathway
file_date_updated: 2021-03-01T23:30:04Z
fulldoi: https://doi.org/10.15479/AT:ISTA:7525
has_accepted_license: '1'
keyword:
- Cav2.3
- medial habenula (MHb)
- interpeduncular nucleus (IPN)
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
page: '79'
publication_identifier:
  issn:
  - 2663-337X
publication_status: published
publisher: Institute of Science and Technology Austria
status: public
supervisor:
- first_name: Ryuichi
  full_name: Shigemoto, Ryuichi
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
title: Localization and functional role of Cav2.3 in the medial habenula to interpeduncular
  nucleus pathway
type: dissertation
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
year: '2020'
...
---
_id: '8532'
abstract:
- lang: eng
  text: The molecular anatomy of synapses defines their characteristics in transmission
    and plasticity. Precise measurements of the number and distribution of synaptic
    proteins are important for our understanding of synapse heterogeneity within and
    between brain regions. Freeze–fracture replica immunogold electron microscopy
    enables us to analyze them quantitatively on a two-dimensional membrane surface.
    Here, we introduce Darea software, which utilizes deep learning for analysis of
    replica images and demonstrate its usefulness for quick measurements of the pre-
    and postsynaptic areas, density and distribution of gold particles at synapses
    in a reproducible manner. We used Darea for comparing glutamate receptor and calcium
    channel distributions between hippocampal CA3-CA1 spine synapses on apical and
    basal dendrites, which differ in signaling pathways involved in synaptic plasticity.
    We found that apical synapses express a higher density of α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
    acid (AMPA) receptors and a stronger increase of AMPA receptors with synaptic
    size, while basal synapses show a larger increase in N-methyl-D-aspartate (NMDA)
    receptors with size. Interestingly, AMPA and NMDA receptors are segregated within
    postsynaptic sites and negatively correlated in density among both apical and
    basal synapses. In the presynaptic sites, Cav2.1 voltage-gated calcium channels
    show similar densities in apical and basal synapses with distributions consistent
    with an exclusion zone model of calcium channel-release site topography.
acknowledgement: "This research was funded by Austrian Academy of Sciences, DOC fellowship
  to D.K., European Research\r\nCouncil Advanced Grant 694539 and European Union Human
  Brain Project (HBP) SGA2 785907 to R.S.\r\nWe acknowledge Elena Hollergschwandtner
  for technical support."
article_number: '6737'
article_processing_charge: No
article_type: original
author:
- first_name: David
  full_name: Kleindienst, David
  id: 42E121A4-F248-11E8-B48F-1D18A9856A87
  last_name: Kleindienst
- first_name: Jacqueline-Claire
  full_name: Montanaro-Punzengruber, Jacqueline-Claire
  id: 3786AB44-F248-11E8-B48F-1D18A9856A87
  last_name: Montanaro-Punzengruber
- first_name: Pradeep
  full_name: Bhandari, Pradeep
  id: 45EDD1BC-F248-11E8-B48F-1D18A9856A87
  last_name: Bhandari
  orcid: 0000-0003-0863-4481
- first_name: Matthew J
  full_name: Case, Matthew J
  id: 44B7CA5A-F248-11E8-B48F-1D18A9856A87
  last_name: Case
- first_name: Yugo
  full_name: Fukazawa, Yugo
  last_name: Fukazawa
- first_name: Ryuichi
  full_name: Shigemoto, Ryuichi
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
citation:
  ama: Kleindienst D, Montanaro-Punzengruber J-C, Bhandari P, Case MJ, Fukazawa Y,
    Shigemoto R. Deep learning-assisted high-throughput analysis of freeze-fracture
    replica images applied to glutamate receptors and calcium channels at hippocampal
    synapses. <i>International Journal of Molecular Sciences</i>. 2020;21(18). doi:<a
    href="https://doi.org/10.3390/ijms21186737">10.3390/ijms21186737</a>
  apa: Kleindienst, D., Montanaro-Punzengruber, J.-C., Bhandari, P., Case, M. J.,
    Fukazawa, Y., &#38; Shigemoto, R. (2020). Deep learning-assisted high-throughput
    analysis of freeze-fracture replica images applied to glutamate receptors and
    calcium channels at hippocampal synapses. <i>International Journal of Molecular
    Sciences</i>. MDPI. <a href="https://doi.org/10.3390/ijms21186737">https://doi.org/10.3390/ijms21186737</a>
  chicago: Kleindienst, David, Jacqueline-Claire Montanaro-Punzengruber, Pradeep Bhandari,
    Matthew J Case, Yugo Fukazawa, and Ryuichi Shigemoto. “Deep Learning-Assisted
    High-Throughput Analysis of Freeze-Fracture Replica Images Applied to Glutamate
    Receptors and Calcium Channels at Hippocampal Synapses.” <i>International Journal
    of Molecular Sciences</i>. MDPI, 2020. <a href="https://doi.org/10.3390/ijms21186737">https://doi.org/10.3390/ijms21186737</a>.
  ieee: D. Kleindienst, J.-C. Montanaro-Punzengruber, P. Bhandari, M. J. Case, Y.
    Fukazawa, and R. Shigemoto, “Deep learning-assisted high-throughput analysis of
    freeze-fracture replica images applied to glutamate receptors and calcium channels
    at hippocampal synapses,” <i>International Journal of Molecular Sciences</i>,
    vol. 21, no. 18. MDPI, 2020.
  ista: Kleindienst D, Montanaro-Punzengruber J-C, Bhandari P, Case MJ, Fukazawa Y,
    Shigemoto R. 2020. Deep learning-assisted high-throughput analysis of freeze-fracture
    replica images applied to glutamate receptors and calcium channels at hippocampal
    synapses. International Journal of Molecular Sciences. 21(18), 6737.
  mla: Kleindienst, David, et al. “Deep Learning-Assisted High-Throughput Analysis
    of Freeze-Fracture Replica Images Applied to Glutamate Receptors and Calcium Channels
    at Hippocampal Synapses.” <i>International Journal of Molecular Sciences</i>,
    vol. 21, no. 18, 6737, MDPI, 2020, doi:<a href="https://doi.org/10.3390/ijms21186737">10.3390/ijms21186737</a>.
  short: D. Kleindienst, J.-C. Montanaro-Punzengruber, P. Bhandari, M.J. Case, Y.
    Fukazawa, R. Shigemoto, International Journal of Molecular Sciences 21 (2020).
corr_author: '1'
date_created: 2020-09-20T22:01:35Z
date_published: 2020-09-14T00:00:00Z
date_updated: 2026-09-29T22:31:02Z
day: '14'
ddc:
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doi: 10.3390/ijms21186737
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title: Deep learning-assisted high-throughput analysis of freeze-fracture replica
  images applied to glutamate receptors and calcium channels at hippocampal synapses
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