[{"article_type":"original","department":[{"_id":"NiBa"}],"month":"09","author":[{"full_name":"Ellis, Thomas","last_name":"Ellis","orcid":"0000-0002-8511-0254","first_name":"Thomas","id":"3153D6D4-F248-11E8-B48F-1D18A9856A87"},{"id":"419049E2-F248-11E8-B48F-1D18A9856A87","first_name":"David","orcid":"0000-0002-4014-8478","last_name":"Field","full_name":"Field, David"},{"full_name":"Barton, Nicholas H","last_name":"Barton","orcid":"0000-0002-8548-5240","id":"4880FE40-F248-11E8-B48F-1D18A9856A87","first_name":"Nicholas H"}],"volume":34,"acknowledgement":"We thank a large number of field volunteers for maintaining the population sampling, and Tom White for assistance with seed collection. We thank Sylvia Rebel for plating tissue for DNA extraction, as well as Sean Stankowski and two anonymous reviewers for feedback on the manuscript. ","doi":"10.1111/mec.70051","oa":1,"pmid":1,"publisher":"Wiley","corr_author":"1","tmp":{"image":"/images/cc_by_nc_nd.png","short":"CC BY-NC-ND (4.0)","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode"},"article_processing_charge":"Yes (via OA deal)","file":[{"date_updated":"2025-12-30T10:12:17Z","relation":"main_file","creator":"dernst","file_id":"20911","checksum":"5059ad4d74e6327b84b5282a39d36774","file_name":"2025_MolecularEcology_Ellis.pdf","success":1,"content_type":"application/pdf","date_created":"2025-12-30T10:12:17Z","file_size":1698605,"access_level":"open_access"}],"publication_status":"published","oa_version":"Published Version","OA_type":"hybrid","title":"Joint estimation of paternity, sibships and pollen dispersal in a snapdragon hybrid zone","date_created":"2025-09-10T05:42:23Z","publication_identifier":{"eissn":["1365-294X"],"issn":["0962-1083"]},"isi":1,"publication":"Molecular Ecology","date_updated":"2025-12-30T10:12:34Z","file_date_updated":"2025-12-30T10:12:17Z","scopus_import":"1","issue":"15","license":"https://creativecommons.org/licenses/by-nc-nd/4.0/","status":"public","has_accepted_license":"1","citation":{"apa":"Ellis, T., Field, D., &#38; Barton, N. H. (2025). Joint estimation of paternity, sibships and pollen dispersal in a snapdragon hybrid zone. <i>Molecular Ecology</i>. Wiley. <a href=\"https://doi.org/10.1111/mec.70051\">https://doi.org/10.1111/mec.70051</a>","mla":"Ellis, Thomas, et al. “Joint Estimation of Paternity, Sibships and Pollen Dispersal in a Snapdragon Hybrid Zone.” <i>Molecular Ecology</i>, vol. 34, no. 15, e70051, Wiley, 2025, doi:<a href=\"https://doi.org/10.1111/mec.70051\">10.1111/mec.70051</a>.","ieee":"T. Ellis, D. Field, and N. H. Barton, “Joint estimation of paternity, sibships and pollen dispersal in a snapdragon hybrid zone,” <i>Molecular Ecology</i>, vol. 34, no. 15. Wiley, 2025.","short":"T. Ellis, D. Field, N.H. Barton, Molecular Ecology 34 (2025).","chicago":"Ellis, Thomas, David Field, and Nicholas H Barton. “Joint Estimation of Paternity, Sibships and Pollen Dispersal in a Snapdragon Hybrid Zone.” <i>Molecular Ecology</i>. Wiley, 2025. <a href=\"https://doi.org/10.1111/mec.70051\">https://doi.org/10.1111/mec.70051</a>.","ama":"Ellis T, Field D, Barton NH. Joint estimation of paternity, sibships and pollen dispersal in a snapdragon hybrid zone. <i>Molecular Ecology</i>. 2025;34(15). doi:<a href=\"https://doi.org/10.1111/mec.70051\">10.1111/mec.70051</a>","ista":"Ellis T, Field D, Barton NH. 2025. Joint estimation of paternity, sibships and pollen dispersal in a snapdragon hybrid zone. Molecular Ecology. 34(15), e70051."},"day":"02","type":"journal_article","quality_controlled":"1","_id":"20325","abstract":[{"text":"Inferring genealogical relationships of wild populations is useful because it gives direct estimates of mating patterns and variance in reproductive success. Inference can be improved by including information about parentage shared between siblings, or by modelling phenotypes or population data related to mating. However, we currently lack a framework to infer parent–offspring relationships, sibships and population parameters in a single analysis. To address this, we here extend a previous method, Fractional Analysis of Paternity and Sibships, to include population data for the case where one parent is known. We illustrate this with the example of pollen dispersal in a natural hybrid zone population of the snapdragon Antirrhinum majus. Pollen dispersal is leptokurtic, with half of mating events occurring within 30 m, but with a long tail of mating events up to 859 m. Using simulations, we find that both sibship and population information substantially improve pedigree reconstruction, and that we can expect to resolve median dispersal distances with high accuracy.","lang":"eng"}],"language":[{"iso":"eng"}],"external_id":{"pmid":["40751392"],"isi":["001542913000001"]},"date_published":"2025-09-02T00:00:00Z","OA_place":"publisher","year":"2025","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","ddc":["570"],"intvolume":"        34","article_number":"e70051"},{"OA_place":"publisher","date_published":"2025-09-03T00:00:00Z","intvolume":"        19","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","ddc":["540"],"year":"2025","day":"03","citation":{"mla":"Ibáñez, Maria, et al. “Prospects of Nanoscience with Nanocrystals: 2025 Edition.” <i>ACS Nano</i>, vol. 19, no. 36, American Chemical Society, 2025, pp. 31969–32051, doi:<a href=\"https://doi.org/10.1021/acsnano.5c07838\">10.1021/acsnano.5c07838</a>.","short":"M. Ibáñez, S.C. Boehme, R. Buonsanti, J. De Roo, D.J. Milliron, S. Ithurria, A.L. Rogach, A. Cabot, M. Yarema, B.M. Cossairt, P. Reiss, D.V. Talapin, L. Protesescu, Z. Hens, I. Infante, M.I. Bodnarchuk, X. Ye, Y. Wang, H. Zhang, E. Lhuillier, V.I. Klimov, H. Utzat, G. Rainò, C.R. Kagan, M. Cargnello, J.S. Son, M.V. Kovalenko, ACS Nano 19 (2025) 31969–32051.","ieee":"M. Ibáñez <i>et al.</i>, “Prospects of nanoscience with nanocrystals: 2025 edition,” <i>ACS Nano</i>, vol. 19, no. 36. American Chemical Society, pp. 31969–32051, 2025.","apa":"Ibáñez, M., Boehme, S. C., Buonsanti, R., De Roo, J., Milliron, D. J., Ithurria, S., … Kovalenko, M. V. (2025). Prospects of nanoscience with nanocrystals: 2025 edition. <i>ACS Nano</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acsnano.5c07838\">https://doi.org/10.1021/acsnano.5c07838</a>","ama":"Ibáñez M, Boehme SC, Buonsanti R, et al. Prospects of nanoscience with nanocrystals: 2025 edition. <i>ACS Nano</i>. 2025;19(36):31969–32051. doi:<a href=\"https://doi.org/10.1021/acsnano.5c07838\">10.1021/acsnano.5c07838</a>","ista":"Ibáñez M, Boehme SC, Buonsanti R, De Roo J, Milliron DJ, Ithurria S, Rogach AL, Cabot A, Yarema M, Cossairt BM, Reiss P, Talapin DV, Protesescu L, Hens Z, Infante I, Bodnarchuk MI, Ye X, Wang Y, Zhang H, Lhuillier E, Klimov VI, Utzat H, Rainò G, Kagan CR, Cargnello M, Son JS, Kovalenko MV. 2025. Prospects of nanoscience with nanocrystals: 2025 edition. ACS Nano. 19(36), 31969–32051.","chicago":"Ibáñez, Maria, Simon C. Boehme, Raffaella Buonsanti, Jonathan De Roo, Delia J. Milliron, Sandrine Ithurria, Andrey L. Rogach, et al. “Prospects of Nanoscience with Nanocrystals: 2025 Edition.” <i>ACS Nano</i>. American Chemical Society, 2025. <a href=\"https://doi.org/10.1021/acsnano.5c07838\">https://doi.org/10.1021/acsnano.5c07838</a>."},"has_accepted_license":"1","external_id":{"isi":["001562960800001"],"pmid":["40902118"]},"abstract":[{"lang":"eng","text":"Nanocrystals (NCs) of various compositions have made important contributions to science and technology, with their impact recognized by the 2023 Nobel Prize in Chemistry for the discovery and synthesis of semiconductor quantum dots (QDs). Over four decades of research into NCs has led to numerous advancements in diverse fields, such as optoelectronics, catalysis, energy, medicine, and recently, quantum information and computing. The last 10 years since the predecessor perspective “Prospect of Nanoscience with Nanocrystals” was published in ACS Nano have seen NC research continuously evolve, yielding critical advances in fundamental understanding and practical applications. Mechanistic insights into NC formation have translated into precision control over NC size, shape, and composition. Emerging synthesis techniques have broadened the landscape of compounds obtainable in colloidal NC form. Sophistication in surface chemistry, jointly bolstered by theoretical models and experimental findings, has facilitated refined control over NC properties and represents a trusted gateway to enhanced NC stability and processability. The assembly of NCs into superlattices, along with two-dimensional (2D) photolithography and three-dimensional (3D) printing, has expanded their utility in creating materials with tailored properties. Applications of NCs are also flourishing, consolidating progress in fields targeted early on, such as optoelectronics and catalysis, and extending into areas ranging from quantum technology to phase-change memories. In this perspective, we review the extensive progress in research on NCs over the past decade and highlight key areas where future research may bring further breakthroughs."}],"_id":"20329","language":[{"iso":"eng"}],"quality_controlled":"1","type":"journal_article","issue":"36","scopus_import":"1","PlanS_conform":"1","status":"public","page":" 31969–32051","publication":"ACS Nano","date_updated":"2025-12-30T09:35:54Z","isi":1,"file_date_updated":"2025-12-30T09:35:44Z","date_created":"2025-09-10T05:47:13Z","title":"Prospects of nanoscience with nanocrystals: 2025 edition","OA_type":"hybrid","oa_version":"Published Version","publication_identifier":{"eissn":["1936-086X"],"issn":["1936-0851"]},"file":[{"creator":"dernst","date_updated":"2025-12-30T09:35:44Z","file_id":"20909","relation":"main_file","file_name":"2025_ACSNano_Ibanez.pdf","checksum":"81144f848478a130721e9ffa87b6831e","date_created":"2025-12-30T09:35:44Z","file_size":10956272,"success":1,"content_type":"application/pdf","access_level":"open_access"}],"publication_status":"published","pmid":1,"article_processing_charge":"Yes (via OA deal)","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"corr_author":"1","publisher":"American Chemical Society","author":[{"first_name":"Maria","id":"43C61214-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-5013-2843","full_name":"Ibáñez, Maria","last_name":"Ibáñez"},{"first_name":"Simon C.","last_name":"Boehme","full_name":"Boehme, Simon C."},{"first_name":"Raffaella","last_name":"Buonsanti","full_name":"Buonsanti, Raffaella"},{"first_name":"Jonathan","last_name":"De Roo","full_name":"De Roo, Jonathan"},{"first_name":"Delia J.","full_name":"Milliron, Delia J.","last_name":"Milliron"},{"first_name":"Sandrine","full_name":"Ithurria, Sandrine","last_name":"Ithurria"},{"first_name":"Andrey L.","full_name":"Rogach, Andrey L.","last_name":"Rogach"},{"first_name":"Andreu","full_name":"Cabot, Andreu","last_name":"Cabot"},{"last_name":"Yarema","full_name":"Yarema, Maksym","first_name":"Maksym"},{"first_name":"Brandi M.","last_name":"Cossairt","full_name":"Cossairt, Brandi M."},{"full_name":"Reiss, Peter","last_name":"Reiss","first_name":"Peter"},{"first_name":"Dmitri V.","last_name":"Talapin","full_name":"Talapin, Dmitri V."},{"full_name":"Protesescu, Loredana","last_name":"Protesescu","first_name":"Loredana"},{"full_name":"Hens, Zeger","last_name":"Hens","first_name":"Zeger"},{"first_name":"Ivan","full_name":"Infante, Ivan","last_name":"Infante"},{"first_name":"Maryna I.","last_name":"Bodnarchuk","full_name":"Bodnarchuk, Maryna I."},{"last_name":"Ye","full_name":"Ye, Xingchen","first_name":"Xingchen"},{"first_name":"Yuanyuan","full_name":"Wang, Yuanyuan","last_name":"Wang"},{"first_name":"Hao","last_name":"Zhang","full_name":"Zhang, Hao"},{"first_name":"Emmanuel","full_name":"Lhuillier, Emmanuel","last_name":"Lhuillier"},{"full_name":"Klimov, Victor I.","last_name":"Klimov","first_name":"Victor I."},{"last_name":"Utzat","full_name":"Utzat, Hendrik","first_name":"Hendrik"},{"full_name":"Rainò, Gabriele","last_name":"Rainò","first_name":"Gabriele"},{"last_name":"Kagan","full_name":"Kagan, Cherie R.","first_name":"Cherie R."},{"first_name":"Matteo","last_name":"Cargnello","full_name":"Cargnello, Matteo"},{"first_name":"Jae Sung","full_name":"Son, Jae Sung","last_name":"Son"},{"first_name":"Maksym V.","full_name":"Kovalenko, Maksym V.","last_name":"Kovalenko"}],"volume":19,"department":[{"_id":"MaIb"}],"month":"09","article_type":"review","project":[{"name":"HighTE: The Werner Siemens Laboratory for the High Throughput Discovery of Semiconductors for Waste Heat Recovery","_id":"9B8F7476-BA93-11EA-9121-9846C619BF3A"}],"oa":1,"doi":"10.1021/acsnano.5c07838","acknowledgement":"This article was inspired by the discussions and presentations at the NaNaX10 (Nanoscience with Nanocrystals) conference held in the Institute of Science and Technology of Austria (ISTA), July 3–7, 2023. M.I. acknowledges financial support from the Werner Siemens Foundation (WSS) and Abayomi Lawal, Christine Fiedler, Ihor Cherniukh, Francesco Milillo, Navita Jakhar, and Magali Lorion for all their help in editing this manuscript. M.I. would also like to acknowledge Christine Fiedler for the design of the TOC. S.C.B. acknowledges Dr. Dmitry Dirin for proofreading and the Weizmann-ETH Zurich Bridge Program for financial support. A.C. thanks Linlin Yang for drafting Figure 6 and acknowledges support from the project Sydecat with reference PID2022-136883OB-C22 under MCIN/AEI/10.13039/501100011033/FEDER, UE, and to the Departament de Recerca i Universitats of the Generalitat de Catalunya (2021 SGR 01581). M.C. acknowledges support from the Sloan Foundation, BASF Corporation, the Novo Nordisk Foundation CO2 Research Center (CORC), and the US Department of Energy, Chemical Sciences, Geosciences and Biosciences Division of the Office of Basic Energy Sciences, via the SUNCAT Center for Interface Science and Catalysis. D.V.T. acknowledges support from the U.S. National Science Foundation under Grant Number CHE-2404291. V.I.K. acknowledges support by the Solar Photochemistry Program of the Chemical Sciences, Biosciences and Geosciences Division, Office of Basic Energy Sciences, Office of Science, U.S. Department of Energy (overview of studies of spin-exchange interactions in Mn-doped QDs) and the Laboratory Directed Research and Development (LDRD) program at Los Alamos National Laboratory under project 20250443ER (overview of QD optical gain and lasing studies). E.L. acknowledges financial from the ERC grant blackQD (grant no. 756225) and AQDtive (grant no. 101086358), and from French state funds managed by the ANR through the grants Bright (ANR-21-CE24-0012-02), MixDferro (ANR-21-CE09-0029), Quicktera (ANR-22-CE09-0018), E-map (ANR-23-CE50-0025), DIRAC (ANR-24-ASM1-0001), camIR (ANR-24-CE42-2757), and Piquant (ANR-24-CE09-0786). L.P. acknowledges financial support from SOLAR NL, funded by the National Growth Fund in The Netherlands. G.R. acknowledges funding from the Swiss National Science Foundation (Grant No. 200021_192308, “Q-Light─Engineered Quantum Light Sources with Nanocrystal Assemblies”). P.R. acknowledges funding from European Union’s Horizon research and innovation program under grant agreement 101135704 (HortiQD project) and from the French Research Agency ANR (grant ANR-24-CE09-0786-01 PIQUANT). A.L.R. acknowledges financial support from the Innovation and Technology Commission of Hong Kong (ITS/027/22MX), and from the Research Grant Council of Hong Kong SAR through the RGC Senior Research Fellow Scheme (SRFS 2324-1S04). J.S.S. acknowledges financial support from the National Research Foundation of Korea (NRF) grant funded by the Ministry of Science and ICT (2022R1A2C3009129). X.Y. acknowledges support from the U.S. National Science Foundation under awards DMR-2102526 and CBET-2223453. Y.W. acknowledges the support from the Science and Technology Program in Jiangsu Province (BK20232041) and the National Natural Science Foundation of China (22171132 and 52472165). M.Y. acknowledges funding by the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme, grant agreement No. 852751. I.I., Z.H. and M.K acknowledge the European Commission for funding (MSCA-DN Track The Twin, grant agreement 101168820). Z.H. acknowledges funding from the FWO-Vlaanderen (research projects G0B2921N and G0C5723N) and Ghent University (BOF-GOA 01G02124). H.Z. acknowledges W. Liu for editing Figure 19 and the financial support from Beijing Natural Science Foundation (JQ24003)."},{"file":[{"access_level":"open_access","date_created":"2026-01-05T13:03:18Z","file_size":1550562,"success":1,"content_type":"application/pdf","file_name":"2025_Genetics_Puixeu.pdf","checksum":"bbb73bbf8617812d4d8db4af92be9538","relation":"main_file","file_id":"20946","date_updated":"2026-01-05T13:03:18Z","creator":"dernst"}],"publication_status":"published","date_created":"2025-09-10T05:48:04Z","title":"The relationship between sexual dimorphism and intersex correlation: Do models support intuition?","OA_type":"hybrid","oa_version":"Published Version","publication_identifier":{"issn":["1943-2631"]},"author":[{"last_name":"Puixeu Sala","full_name":"Puixeu Sala, Gemma","orcid":"0000-0001-8330-1754","id":"33AB266C-F248-11E8-B48F-1D18A9856A87","first_name":"Gemma"},{"full_name":"Hayward, Laura","last_name":"Hayward","id":"fc885ee5-24bf-11eb-ad7b-bcc5104c0c1b","first_name":"Laura"}],"volume":231,"department":[{"_id":"BeVi"},{"_id":"NiBa"}],"month":"11","article_type":"original","project":[{"name":"Sexual conflict: resolution, constraints and biomedical implications","grant_number":"25817","_id":"9B9DFC9E-BA93-11EA-9121-9846C619BF3A"},{"_id":"2564DBCA-B435-11E9-9278-68D0E5697425","call_identifier":"H2020","grant_number":"665385","name":"International IST Doctoral Program"},{"name":"Understanding the evolution of continuous genomes","grant_number":"101055327","_id":"bd6958e0-d553-11ed-ba76-86eba6a76c00"}],"oa":1,"doi":"10.1093/genetics/iyaf175","acknowledgement":"We thank Tim Connallon for useful discussions and correspondence, Himani Sachdeva and Nick Barton for comments on the manuscript and the Scientific Computing unit at ISTA for technical support. GP is the recipient of a DOC Fellowship of the Austrian Academy of Sciences at the Institute of Science and Technology Austria (DOC 25817) and received funding from the European Union’s Horizon 2020 research and innovation program under the Marie Skłodowska-Curie Grant (agreement no. 665385). LH received funding from the European Research Council, under the HaplotypeStructure Grant (grant no. 101055327) to Nick Barton.","article_processing_charge":"Yes (via OA deal)","corr_author":"1","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"publisher":"Oxford University Press","day":"01","citation":{"mla":"Puixeu Sala, Gemma, and Laura Hayward. “The Relationship between Sexual Dimorphism and Intersex Correlation: Do Models Support Intuition?” <i>Genetics</i>, vol. 231, no. 3, iyaf175, Oxford University Press, 2025, doi:<a href=\"https://doi.org/10.1093/genetics/iyaf175\">10.1093/genetics/iyaf175</a>.","ieee":"G. Puixeu Sala and L. Hayward, “The relationship between sexual dimorphism and intersex correlation: Do models support intuition?,” <i>Genetics</i>, vol. 231, no. 3. Oxford University Press, 2025.","short":"G. Puixeu Sala, L. Hayward, Genetics 231 (2025).","apa":"Puixeu Sala, G., &#38; Hayward, L. (2025). The relationship between sexual dimorphism and intersex correlation: Do models support intuition? <i>Genetics</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/genetics/iyaf175\">https://doi.org/10.1093/genetics/iyaf175</a>","ama":"Puixeu Sala G, Hayward L. The relationship between sexual dimorphism and intersex correlation: Do models support intuition? <i>Genetics</i>. 2025;231(3). doi:<a href=\"https://doi.org/10.1093/genetics/iyaf175\">10.1093/genetics/iyaf175</a>","ista":"Puixeu Sala G, Hayward L. 2025. The relationship between sexual dimorphism and intersex correlation: Do models support intuition? Genetics. 231(3), iyaf175.","chicago":"Puixeu Sala, Gemma, and Laura Hayward. “The Relationship between Sexual Dimorphism and Intersex Correlation: Do Models Support Intuition?” <i>Genetics</i>. Oxford University Press, 2025. <a href=\"https://doi.org/10.1093/genetics/iyaf175\">https://doi.org/10.1093/genetics/iyaf175</a>."},"has_accepted_license":"1","external_id":{"isi":["001598595000001"]},"abstract":[{"lang":"eng","text":"The evolution of sexual dimorphism (the difference in average trait values between females and males, SD), is often thought to be constrained by shared genetic architecture between the sexes. Indeed, it is commonly expected that SD should negatively correlate with the intersex correlation (the genetic correlation between effects of segregating variants in females and males, r fm), either because (1) traits with ancestrally low r fm are less constrained in their ability to respond to sex-specific selection and thus evolve to be more dimorphic, or because (2) sex-specific selection, driving sexual dimorphism evolution, also acts to reduce r fm. Despite the intuitive appeal and prominence of these ideas, their generality and the conditions in which they hold remain unclear. Here, we develop models incorporating sex-specific stabilizing selection, mutation and genetic drift to examine the relationship between r fm and SD. We show that the two commonly-discussed mechanisms with the potential to generate a negative correlation between SD and r fm could just as easily generate a positive association, since the standard line of reasoning hinges on a hidden assumption that sex-specific adaptation more frequently favors increased dimorphism than reduced dimorphism. Our results provide, to our knowledge, the first mechanistic framework for understanding the conditions under which a correlation between r fm and SD may arise and offer a compelling explanation for inconsistent empirical evidence. We also make the intriguing observation that—even when selection between the two sexes is identical—drift generates nonzero SD. We quantify this effect and discuss its significance."}],"_id":"20330","language":[{"iso":"eng"}],"quality_controlled":"1","type":"journal_article","OA_place":"publisher","date_published":"2025-11-01T00:00:00Z","article_number":"iyaf175","intvolume":"       231","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","ddc":["570"],"year":"2025","date_updated":"2026-01-05T13:04:07Z","publication":"Genetics","isi":1,"file_date_updated":"2026-01-05T13:03:18Z","ec_funded":1,"issue":"3","scopus_import":"1","PlanS_conform":"1","status":"public"},{"PlanS_conform":"1","status":"public","scopus_import":"1","file_date_updated":"2025-12-30T10:21:00Z","publication":"Seminars in Cell and Developmental Biology","date_updated":"2025-12-30T10:21:13Z","isi":1,"article_number":"103650","intvolume":"       175","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","ddc":["570"],"year":"2025","OA_place":"publisher","date_published":"2025-12-01T00:00:00Z","external_id":{"isi":["001567260100001"],"pmid":["40913907"]},"_id":"20349","language":[{"iso":"eng"}],"abstract":[{"text":"Oogenesis – the formation and development of an oocyte – is fundamental to reproduction and embryonic development. Due to its accessibility to genetic manipulations and the ability to culture and experimentally manipulate oocytes ex vivo, zebrafish has emerged as a powerful vertebrate model system for studying oogenesis. In this review, we provide a comprehensive overview of zebrafish oogenesis, from early germ cell formation to oocyte maturation and fertilization. We discuss recent advances in uncovering the molecular and cellular mechanisms driving this complex process and highlight key knowledge gaps that remain to be addressed.","lang":"eng"}],"quality_controlled":"1","type":"journal_article","day":"01","citation":{"chicago":"Hofmann, Laura, and Carl-Philipp J Heisenberg. “Decoding Zebrafish Oogenesis: From Primordial Germ Cell Development to Fertilization.” <i>Seminars in Cell and Developmental Biology</i>. Elsevier, 2025. <a href=\"https://doi.org/10.1016/j.semcdb.2025.103650\">https://doi.org/10.1016/j.semcdb.2025.103650</a>.","ista":"Hofmann L, Heisenberg C-PJ. 2025. Decoding zebrafish oogenesis: From primordial germ cell development to fertilization. Seminars in Cell and Developmental Biology. 175, 103650.","ama":"Hofmann L, Heisenberg C-PJ. Decoding zebrafish oogenesis: From primordial germ cell development to fertilization. <i>Seminars in Cell and Developmental Biology</i>. 2025;175. doi:<a href=\"https://doi.org/10.1016/j.semcdb.2025.103650\">10.1016/j.semcdb.2025.103650</a>","apa":"Hofmann, L., &#38; Heisenberg, C.-P. J. (2025). Decoding zebrafish oogenesis: From primordial germ cell development to fertilization. <i>Seminars in Cell and Developmental Biology</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.semcdb.2025.103650\">https://doi.org/10.1016/j.semcdb.2025.103650</a>","short":"L. Hofmann, C.-P.J. Heisenberg, Seminars in Cell and Developmental Biology 175 (2025).","ieee":"L. Hofmann and C.-P. J. Heisenberg, “Decoding zebrafish oogenesis: From primordial germ cell development to fertilization,” <i>Seminars in Cell and Developmental Biology</i>, vol. 175. Elsevier, 2025.","mla":"Hofmann, Laura, and Carl-Philipp J. Heisenberg. “Decoding Zebrafish Oogenesis: From Primordial Germ Cell Development to Fertilization.” <i>Seminars in Cell and Developmental Biology</i>, vol. 175, 103650, Elsevier, 2025, doi:<a href=\"https://doi.org/10.1016/j.semcdb.2025.103650\">10.1016/j.semcdb.2025.103650</a>."},"has_accepted_license":"1","article_processing_charge":"Yes (via OA deal)","corr_author":"1","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"publisher":"Elsevier","pmid":1,"oa":1,"doi":"10.1016/j.semcdb.2025.103650","acknowledgement":"We thank Carolina Camelo for making schematics for this review.","author":[{"id":"b88d43f2-dc74-11ea-a0a7-e41b7912e031","first_name":"Laura","full_name":"Hofmann, Laura","last_name":"Hofmann"},{"last_name":"Heisenberg","full_name":"Heisenberg, Carl-Philipp J","orcid":"0000-0002-0912-4566","id":"39427864-F248-11E8-B48F-1D18A9856A87","first_name":"Carl-Philipp J"}],"volume":175,"department":[{"_id":"CaHe"}],"month":"12","article_type":"review","publication_identifier":{"issn":["1084-9521"],"eissn":["1096-3634"]},"title":"Decoding zebrafish oogenesis: From primordial germ cell development to fertilization","date_created":"2025-09-14T22:01:32Z","OA_type":"hybrid","oa_version":"Published Version","publication_status":"published","file":[{"success":1,"content_type":"application/pdf","file_size":2778561,"date_created":"2025-12-30T10:21:00Z","access_level":"open_access","file_id":"20914","date_updated":"2025-12-30T10:21:00Z","relation":"main_file","creator":"dernst","checksum":"80ea6cbb004853bb1e87db3422a74aca","file_name":"2025_SemCellDevBiology_Hofmann.pdf"}]},{"article_type":"original","project":[{"name":"Synthetic and structural biology of Rab GTPase networks","_id":"bd6ae2ca-d553-11ed-ba76-a4aa239da5ee","grant_number":"101045340"}],"department":[{"_id":"MaLo"}],"month":"08","volume":11,"author":[{"last_name":"Wilmes","full_name":"Wilmes, Stephan","first_name":"Stephan"},{"full_name":"Tönjes, Jesse","last_name":"Tönjes","first_name":"Jesse"},{"last_name":"Drechsler","full_name":"Drechsler, Maik","first_name":"Maik"},{"first_name":"Anita","last_name":"Ruf","full_name":"Ruf, Anita"},{"last_name":"Schäfer","full_name":"Schäfer, Jan Hannes","first_name":"Jan Hannes"},{"first_name":"Anna","full_name":"Lürick, Anna","last_name":"Lürick"},{"full_name":"Januliene, Dovile","last_name":"Januliene","first_name":"Dovile"},{"last_name":"Apelt","full_name":"Apelt, Steven","first_name":"Steven"},{"first_name":"Daniele","last_name":"Di Iorio","full_name":"Di Iorio, Daniele"},{"last_name":"Wegner","full_name":"Wegner, Seraphine V.","first_name":"Seraphine V."},{"first_name":"Martin","id":"462D4284-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-7309-9724","full_name":"Loose, Martin","last_name":"Loose"},{"full_name":"Moeller, Arne","last_name":"Moeller","first_name":"Arne"},{"full_name":"Paululat, Achim","last_name":"Paululat","first_name":"Achim"},{"last_name":"Kümmel","full_name":"Kümmel, Daniel","first_name":"Daniel"}],"acknowledgement":"We thank A.-M. Lawrence-Dörner and B. Berkenfeld for technical assistance and the members of the Kümmel Lab for constructive feedback. We are grateful to C. Ungermann and L. Langemeyer for insightful discussions and to F. Barr for providing plasmids encoding Fuzzy, Inturned, Rab23, and Rsg1. The template clone Flag-ciBAR1 was a gift from K.-I. Takemaru (Addgene, plasmid #200440). We thank the Bloomington Drosophila Stock center (BDSC) and DSHB for providing fly stocks and antibodies. This work was supported by the German Research Foundation (DFG) through the grants SFB1557-P10 (D.K.), SFB1557-P11 (A.M.), and SFB1577-P6, PA517/12-2, PA517/14-1, PA517/15-1, and PA517/16-1 (A.P.). Cryo-EM data were collected at the infrastructure of the University of Osnabrück, funded by the DFG (project number 455249646). J.-H.S. was supported by the Friedrich-Ebert Foundation. M.L. acknowledges funding from the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation program (grant agreement number 101045340).","doi":"10.1126/sciadv.adx2893","oa":1,"pmid":1,"publisher":"AAAS","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"article_processing_charge":"Yes","file":[{"success":1,"content_type":"application/pdf","file_size":3434827,"date_created":"2025-09-15T07:23:12Z","access_level":"open_access","creator":"dernst","date_updated":"2025-09-15T07:23:12Z","relation":"main_file","file_id":"20355","checksum":"a3de801f3c6c1deadd7099d965db799a","file_name":"2025_ScienceAdvance_Wilmes.pdf"}],"publication_status":"published","oa_version":"Published Version","OA_type":"gold","title":"Mechanistic adaptation of the metazoan RabGEFs Mon1-Ccz1 and Fuzzy-Inturned","date_created":"2025-09-14T22:01:32Z","publication_identifier":{"eissn":["2375-2548"]},"isi":1,"publication":"Science Advances","date_updated":"2025-09-30T14:40:27Z","file_date_updated":"2025-09-15T07:23:12Z","scopus_import":"1","issue":"35","DOAJ_listed":"1","status":"public","page":"eadx2893","PlanS_conform":"1","has_accepted_license":"1","day":"29","citation":{"ista":"Wilmes S, Tönjes J, Drechsler M, Ruf A, Schäfer JH, Lürick A, Januliene D, Apelt S, Di Iorio D, Wegner SV, Loose M, Moeller A, Paululat A, Kümmel D. 2025. Mechanistic adaptation of the metazoan RabGEFs Mon1-Ccz1 and Fuzzy-Inturned. Science Advances. 11(35), eadx2893.","ama":"Wilmes S, Tönjes J, Drechsler M, et al. Mechanistic adaptation of the metazoan RabGEFs Mon1-Ccz1 and Fuzzy-Inturned. <i>Science Advances</i>. 2025;11(35):eadx2893. doi:<a href=\"https://doi.org/10.1126/sciadv.adx2893\">10.1126/sciadv.adx2893</a>","chicago":"Wilmes, Stephan, Jesse Tönjes, Maik Drechsler, Anita Ruf, Jan Hannes Schäfer, Anna Lürick, Dovile Januliene, et al. “Mechanistic Adaptation of the Metazoan RabGEFs Mon1-Ccz1 and Fuzzy-Inturned.” <i>Science Advances</i>. AAAS, 2025. <a href=\"https://doi.org/10.1126/sciadv.adx2893\">https://doi.org/10.1126/sciadv.adx2893</a>.","ieee":"S. Wilmes <i>et al.</i>, “Mechanistic adaptation of the metazoan RabGEFs Mon1-Ccz1 and Fuzzy-Inturned,” <i>Science Advances</i>, vol. 11, no. 35. AAAS, p. eadx2893, 2025.","short":"S. Wilmes, J. Tönjes, M. Drechsler, A. Ruf, J.H. Schäfer, A. Lürick, D. Januliene, S. Apelt, D. Di Iorio, S.V. Wegner, M. Loose, A. Moeller, A. Paululat, D. Kümmel, Science Advances 11 (2025) eadx2893.","mla":"Wilmes, Stephan, et al. “Mechanistic Adaptation of the Metazoan RabGEFs Mon1-Ccz1 and Fuzzy-Inturned.” <i>Science Advances</i>, vol. 11, no. 35, AAAS, 2025, p. eadx2893, doi:<a href=\"https://doi.org/10.1126/sciadv.adx2893\">10.1126/sciadv.adx2893</a>.","apa":"Wilmes, S., Tönjes, J., Drechsler, M., Ruf, A., Schäfer, J. H., Lürick, A., … Kümmel, D. (2025). Mechanistic adaptation of the metazoan RabGEFs Mon1-Ccz1 and Fuzzy-Inturned. <i>Science Advances</i>. AAAS. <a href=\"https://doi.org/10.1126/sciadv.adx2893\">https://doi.org/10.1126/sciadv.adx2893</a>"},"type":"journal_article","quality_controlled":"1","language":[{"iso":"eng"}],"_id":"20351","abstract":[{"text":"Rab GTPases organize intracellular trafficking and provide identity to organelles. Their spatiotemporal activation by guanine nucleotide exchange factors (GEFs) is tightly controlled to ensure fidelity. Our structural and functional comparison of the tri-longin domain RabGEFs Mon1-Ccz1 and Fuzzy-Inturned reveals the molecular basis for their target specificity. Both complexes rely on a conserved sequence motif of their substrate GTPases for the catalytic mechanism, while secondary interactions allow discrimination between targets. We also find that dimeric Mon1-Ccz1 from fungi and the metazoan homologs with the additional third subunit RMC1/Bulli bind membranes through electrostatic interactions via distinct interfaces. Protein-lipid interaction studies and functional characterization in flies reveal an essential function of RMC1/Bulli as mediator of GEF complex membrane recruitment. In the case of Fuzzy-Inturned, reconstitution experiments demonstrate that the BAR (Bin-Amphiphysin-Rvs) domain protein CiBAR1 can support membrane recruitment of the GEF. Collectively, our study demonstrates the molecular basis for the adaptation of TLD-RabGEFs to different cellular functions.","lang":"eng"}],"external_id":{"pmid":["40864718"],"isi":["001559806100033"]},"date_published":"2025-08-29T00:00:00Z","OA_place":"publisher","year":"2025","ddc":["570"],"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","intvolume":"        11"},{"intvolume":"       393","ddc":["510"],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","year":"2025","OA_place":"publisher","date_published":"2025-10-01T00:00:00Z","external_id":{"isi":["001567740200001"],"arxiv":["2409.01920"]},"abstract":[{"lang":"eng","text":"We prove upper and lower bounds on the number of pairs of commuting n x n matrices with integer entries in [-T, T], as T -> . Our work uses Fourier analysis and leads to an analysis of exponential sums involving matrices over finite fields. These are bounded by combining a stratification result of Fouvry and Katz with a new result about the flatness of the commutator Lie bracket."}],"_id":"20367","language":[{"iso":"eng"}],"quality_controlled":"1","type":"journal_article","day":"01","citation":{"apa":"Browning, T. D., Sawin, W., &#38; Wang, V. (2025). Pairs of commuting integer matrices. <i>Mathematische Annalen</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00208-025-03285-5\">https://doi.org/10.1007/s00208-025-03285-5</a>","ieee":"T. D. Browning, W. Sawin, and V. Wang, “Pairs of commuting integer matrices,” <i>Mathematische Annalen</i>, vol. 393. Springer Nature, pp. 1863–1880, 2025.","short":"T.D. Browning, W. Sawin, V. Wang, Mathematische Annalen 393 (2025) 1863–1880.","mla":"Browning, Timothy D., et al. “Pairs of Commuting Integer Matrices.” <i>Mathematische Annalen</i>, vol. 393, Springer Nature, 2025, pp. 1863–1880, doi:<a href=\"https://doi.org/10.1007/s00208-025-03285-5\">10.1007/s00208-025-03285-5</a>.","chicago":"Browning, Timothy D, Will Sawin, and Victor Wang. “Pairs of Commuting Integer Matrices.” <i>Mathematische Annalen</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1007/s00208-025-03285-5\">https://doi.org/10.1007/s00208-025-03285-5</a>.","ista":"Browning TD, Sawin W, Wang V. 2025. Pairs of commuting integer matrices. Mathematische Annalen. 393, 1863–1880.","ama":"Browning TD, Sawin W, Wang V. Pairs of commuting integer matrices. <i>Mathematische Annalen</i>. 2025;393:1863–1880. doi:<a href=\"https://doi.org/10.1007/s00208-025-03285-5\">10.1007/s00208-025-03285-5</a>"},"has_accepted_license":"1","PlanS_conform":"1","status":"public","page":"1863–1880","ec_funded":1,"scopus_import":"1","file_date_updated":"2026-01-05T13:15:44Z","date_updated":"2026-01-05T13:15:53Z","publication":"Mathematische Annalen","isi":1,"arxiv":1,"publication_identifier":{"eissn":["1432-1807"],"issn":["0025-5831"]},"date_created":"2025-09-21T22:01:31Z","title":"Pairs of commuting integer matrices","OA_type":"hybrid","oa_version":"Published Version","publication_status":"published","file":[{"date_created":"2026-01-05T13:15:44Z","file_size":337505,"content_type":"application/pdf","success":1,"access_level":"open_access","relation":"main_file","date_updated":"2026-01-05T13:15:44Z","creator":"dernst","file_id":"20950","file_name":"2025_MathAnnalen_Browning.pdf","checksum":"1e94da1a67306e03c8e0086518faf4bc"}],"article_processing_charge":"Yes (via OA deal)","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"corr_author":"1","publisher":"Springer Nature","oa":1,"doi":"10.1007/s00208-025-03285-5","acknowledgement":"The authors are very grateful to Alina Ostafe, Matthew Satriano and Igor Shparlinski for drawing their attention to this problem and for useful comments, and to Michael Larsen and Peter Sarnak for their helpful correspondence. We also thank the referee for their valuable input. While working on this paper the first author was supported by a FWF grant (DOI 10.55776/P36278), the second author by a Sloan Research Fellowship, and the third author by the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie Grant Agreement No. 101034413. Open access funding provided by Institute of Science and Technology (IST Austria).","volume":393,"author":[{"last_name":"Browning","full_name":"Browning, Timothy D","first_name":"Timothy D","id":"35827D50-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-8314-0177"},{"first_name":"Will","last_name":"Sawin","full_name":"Sawin, Will"},{"last_name":"Wang","full_name":"Wang, Victor","orcid":"0000-0002-0704-7026","id":"76096395-aea4-11ed-a680-ab8ebbd3f1b9","first_name":"Victor"}],"department":[{"_id":"TiBr"}],"month":"10","project":[{"grant_number":"P36278","_id":"bd8a4fdc-d553-11ed-ba76-80a0167441a3","name":"Rational curves via function field analytic number theory"},{"grant_number":"101034413","_id":"fc2ed2f7-9c52-11eb-aca3-c01059dda49c","call_identifier":"H2020","name":"IST-BRIDGE: International postdoctoral program"}],"article_type":"original"},{"type":"journal_article","quality_controlled":"1","language":[{"iso":"eng"}],"_id":"20370","abstract":[{"lang":"eng","text":"The Huntingtin protein (HTT), named for its role in Huntington’s disease, has been best understood as a scaffolding protein that promotes vesicle transport by molecular motors along microtubules. Here, we show that HTT also interacts with the actin cytoskeleton, and its loss of function disturbs the morphology and function of the axonal growth cone. We demonstrate that HTT organizes F-actin into bundles. Cryo–electron tomography (cryo-ET) and subtomogram averaging (STA) structural analyses reveal that HTT’s N-terminal HEAT and Bridge domains wrap around F-actin, while the C-terminal HEAT domain is displaced; furthermore, HTT dimerizes via the N-HEAT domain to bridge parallel actin filaments separated by ~20 nanometers. Our study provides the structural basis for understanding how HTT interacts with and organizes the actin cytoskeleton."}],"external_id":{"pmid":["40971423"],"isi":["001575751700013"]},"has_accepted_license":"1","day":"19","citation":{"chicago":"Carpentier, Rémi, Jaesung Kim, Mariacristina Capizzi, Hyeongju Kim, Florian Fäßler, Jesse Hansen, Min Jeong Kim, et al. “Structure of the Huntingtin F-Actin Complex Reveals Its Role in Cytoskeleton Organization.” <i>Science Advances</i>. AAAS, 2025. <a href=\"https://doi.org/10.1126/sciadv.adw4124\">https://doi.org/10.1126/sciadv.adw4124</a>.","ista":"Carpentier R, Kim J, Capizzi M, Kim H, Fäßler F, Hansen J, Kim MJ, Denarier E, Blot B, Degennaro M, Labou S, Arnal I, Marcaida MJ, Peraro MD, Kim D, Schur FK, Song J-J, Humbert S. 2025. Structure of the Huntingtin F-actin complex reveals its role in cytoskeleton organization. Science Advances. 11(38), eadw4124.","ama":"Carpentier R, Kim J, Capizzi M, et al. Structure of the Huntingtin F-actin complex reveals its role in cytoskeleton organization. <i>Science Advances</i>. 2025;11(38). doi:<a href=\"https://doi.org/10.1126/sciadv.adw4124\">10.1126/sciadv.adw4124</a>","apa":"Carpentier, R., Kim, J., Capizzi, M., Kim, H., Fäßler, F., Hansen, J., … Humbert, S. (2025). Structure of the Huntingtin F-actin complex reveals its role in cytoskeleton organization. <i>Science Advances</i>. AAAS. <a href=\"https://doi.org/10.1126/sciadv.adw4124\">https://doi.org/10.1126/sciadv.adw4124</a>","short":"R. Carpentier, J. Kim, M. Capizzi, H. Kim, F. Fäßler, J. Hansen, M.J. Kim, E. Denarier, B. Blot, M. Degennaro, S. Labou, I. Arnal, M.J. Marcaida, M.D. Peraro, D. Kim, F.K. Schur, J.-J. Song, S. Humbert, Science Advances 11 (2025).","ieee":"R. Carpentier <i>et al.</i>, “Structure of the Huntingtin F-actin complex reveals its role in cytoskeleton organization,” <i>Science Advances</i>, vol. 11, no. 38. AAAS, 2025.","mla":"Carpentier, Rémi, et al. “Structure of the Huntingtin F-Actin Complex Reveals Its Role in Cytoskeleton Organization.” <i>Science Advances</i>, vol. 11, no. 38, eadw4124, AAAS, 2025, doi:<a href=\"https://doi.org/10.1126/sciadv.adw4124\">10.1126/sciadv.adw4124</a>."},"year":"2025","ddc":["570"],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","intvolume":"        11","article_number":"eadw4124","date_published":"2025-09-19T00:00:00Z","OA_place":"publisher","file_date_updated":"2025-09-23T07:57:51Z","isi":1,"date_updated":"2026-02-16T11:45:54Z","publication":"Science Advances","status":"public","PlanS_conform":"1","scopus_import":"1","issue":"38","DOAJ_listed":"1","publication_status":"published","file":[{"creator":"dernst","relation":"main_file","date_updated":"2025-09-23T07:57:51Z","file_id":"20372","file_name":"2025_ScienceAdvance_Carpentier.pdf","checksum":"4e2407bdabf8d53f399eb8a20d86218e","file_size":3599137,"date_created":"2025-09-23T07:57:51Z","success":1,"content_type":"application/pdf","access_level":"open_access"}],"publication_identifier":{"issn":["2375-2548"]},"oa_version":"Published Version","OA_type":"gold","date_created":"2025-09-22T08:00:52Z","title":"Structure of the Huntingtin F-actin complex reveals its role in cytoskeleton organization","acknowledgement":"We thank C. Cuveillier, J. Delaroche, T. Ferraro, and A. Zanchi for help with TIRF experiments, electron microscopy preparation, data analysis, and cell cultures, respectively; A. Antkowiak, C. Bosc, C. Fassier, A. Fourest-Lieuvin, and V. Brandt for helpful discussions. We acknowledge the contribution of the Photonic Imaging Center of Grenoble Institute Neuroscience which is part of the ISdV core facility and certified by the IBiSA label and ICM.Quant (RRID:SCR_026393) core facility of the Paris Brain Institute (ICM); the AniRA lentivector production facility from the CELPHEDIA Infrastructure and SFR Biosciences (UAR3444/CNRS, US8/Inserm, ENS de Lyon, UCBL); the Scientific Service Units (SSUs) of ISTA through resources provided by Scientific Computing (SciComp, A. Schloegl and S. Elefante); and the Electron Microscopy Facility (EMF, V.V. Hodirnau). The software programs used for the processing were supported by SBGrid (www.sbgrid.org). This work was supported by the Agence Nationale pour la Recherche (AXYON: ANR-18-CE16-0009-01, S.H.), Austrian Science Fund (FWF) grants (P33367, F.K.M.S.; E435, J.M.H.), ChanZuckerberg Initiative (CZI) grant (DAF2021-234754, F.K.M.S.), Hereditary Disease Foundation Research Grant (HDF 990846, M.C.), European Union (ERC: ActinID 101076260, F.K.M.S.), Fondation pour la Recherche Médicale (FRM: équipe labellisée DEQ202203014675, S.H.; PhD fellowship, FDT202001010865, R.C.), Korea Health Industry Development Institute (KHIDI) (Korea-Switzerland global research support grant: RS-2023-00266300, J.-J.S.), National Research Foundation (NRF) of Korea (Korea-Austria collaborative grant NRF-2019K1A3A1A181160, J.-J.S. and F.K.M.S.; NRF-2020R1A2B5B03001517 and RS-2024-00333346 and RS-2024-00436173, J.-J.S.; 2021R1C1C1006700, D.K.).","doi":"10.1126/sciadv.adw4124","oa":1,"article_type":"original","project":[{"_id":"9B954C5C-BA93-11EA-9121-9846C619BF3A","grant_number":"P33367","name":"Structure and isoform diversity of the Arp2/3 complex"},{"_id":"7bd318a1-9f16-11ee-852c-cc9217763180","grant_number":"E435","name":"In Situ Actin Structures via Hybrid Cryo-electron Microscopy"},{"name":"CryoMinflux-guided in-situ molecular census and structure determination","grant_number":"CZI01","_id":"62909c6f-2b32-11ec-9570-e1476aab5308"},{"_id":"bd980d18-d553-11ed-ba76-ceaa645c97eb","grant_number":"101076260","name":"A molecular atlas of Actin filament IDentities in the cell motility machinery"}],"month":"09","department":[{"_id":"FlSc"}],"volume":11,"author":[{"last_name":"Carpentier","full_name":"Carpentier, Rémi","first_name":"Rémi"},{"full_name":"Kim, Jaesung","last_name":"Kim","first_name":"Jaesung"},{"first_name":"Mariacristina","full_name":"Capizzi, Mariacristina","last_name":"Capizzi"},{"last_name":"Kim","full_name":"Kim, Hyeongju","first_name":"Hyeongju"},{"orcid":"0000-0001-7149-769X","first_name":"Florian","id":"404F5528-F248-11E8-B48F-1D18A9856A87","last_name":"Fäßler","full_name":"Fäßler, Florian"},{"last_name":"Hansen","full_name":"Hansen, Jesse","first_name":"Jesse","id":"1063c618-6f9b-11ec-9123-f912fccded63","orcid":"0000-0001-7967-2085"},{"last_name":"Kim","full_name":"Kim, Min Jeong","first_name":"Min Jeong"},{"last_name":"Denarier","full_name":"Denarier, Eric","first_name":"Eric"},{"first_name":"Béatrice","last_name":"Blot","full_name":"Blot, Béatrice"},{"first_name":"Marine","full_name":"Degennaro, Marine","last_name":"Degennaro"},{"full_name":"Labou, Sophia","last_name":"Labou","first_name":"Sophia"},{"first_name":"Isabelle","last_name":"Arnal","full_name":"Arnal, Isabelle"},{"full_name":"Marcaida, Maria J.","last_name":"Marcaida","first_name":"Maria J."},{"full_name":"Peraro, Matteo Dal","last_name":"Peraro","first_name":"Matteo Dal"},{"first_name":"Doory","last_name":"Kim","full_name":"Kim, Doory"},{"last_name":"Schur","full_name":"Schur, Florian KM","first_name":"Florian KM","id":"48AD8942-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-4790-8078"},{"full_name":"Song, Ji-Joon","last_name":"Song","first_name":"Ji-Joon"},{"first_name":"Sandrine","last_name":"Humbert","full_name":"Humbert, Sandrine"}],"publisher":"AAAS","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"corr_author":"1","article_processing_charge":"Yes","pmid":1},{"date_published":"2025-09-26T00:00:00Z","OA_place":"publisher","intvolume":"        16","article_number":"8447","year":"2025","ddc":["532"],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","has_accepted_license":"1","citation":{"chicago":"Vasudevan, Mukund, Chaitanya S Paranjape, Michael Philip Sitte, Gökhan Yalniz, and Björn Hof. “Aging and Memory of Transitional Turbulence.” <i>Nature Communications</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1038/s41467-025-63044-7\">https://doi.org/10.1038/s41467-025-63044-7</a>.","ista":"Vasudevan M, Paranjape CS, Sitte MP, Yalniz G, Hof B. 2025. Aging and memory of transitional turbulence. Nature Communications. 16, 8447.","ama":"Vasudevan M, Paranjape CS, Sitte MP, Yalniz G, Hof B. Aging and memory of transitional turbulence. <i>Nature Communications</i>. 2025;16. doi:<a href=\"https://doi.org/10.1038/s41467-025-63044-7\">10.1038/s41467-025-63044-7</a>","apa":"Vasudevan, M., Paranjape, C. S., Sitte, M. P., Yalniz, G., &#38; Hof, B. (2025). Aging and memory of transitional turbulence. <i>Nature Communications</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41467-025-63044-7\">https://doi.org/10.1038/s41467-025-63044-7</a>","short":"M. Vasudevan, C.S. Paranjape, M.P. Sitte, G. Yalniz, B. Hof, Nature Communications 16 (2025).","ieee":"M. Vasudevan, C. S. Paranjape, M. P. Sitte, G. Yalniz, and B. Hof, “Aging and memory of transitional turbulence,” <i>Nature Communications</i>, vol. 16. Springer Nature, 2025.","mla":"Vasudevan, Mukund, et al. “Aging and Memory of Transitional Turbulence.” <i>Nature Communications</i>, vol. 16, 8447, Springer Nature, 2025, doi:<a href=\"https://doi.org/10.1038/s41467-025-63044-7\">10.1038/s41467-025-63044-7</a>."},"day":"26","language":[{"iso":"eng"}],"_id":"20402","abstract":[{"lang":"eng","text":"The recent classification of the onset of turbulence as a directed percolation (DP) phase transition has been applied to all major shear flows including pipe, channel, Couette and boundary layer flows. A cornerstone of the DP analogy is the memoryless (Poisson) property of turbulent sites. We here show that, for the classic case of channel flow, neither the decay nor the proliferation of turbulent stripes is memoryless. As demonstrated by a standard analysis of the respective survival curves, isolated channel stripes, in the immediate vicinity of the critical point, age. Consequently, the one to one mapping between turbulent stripes and active DP-sites is not fulfilled in this low Reynolds number regime. In addition, the interpretation of turbulence as a chaotic saddle with supertransient properties, the basis of recent theoretical progress, does not apply to individual localized stripes. The discrepancy between channel flow and the transition models established for pipe and Couette flow, illustrates that seemingly minor geometrical differences between flows can give rise to instabilities and growth mechanisms that fundamentally alter the nature of the transition to turbulence."}],"external_id":{"arxiv":["2112.06537"],"isi":["001582555200041"]},"type":"journal_article","quality_controlled":"1","DOAJ_listed":"1","scopus_import":"1","PlanS_conform":"1","status":"public","date_updated":"2025-12-01T12:40:27Z","publication":"Nature Communications","isi":1,"file_date_updated":"2025-09-27T13:32:03Z","title":"Aging and memory of transitional turbulence","date_created":"2025-09-27T13:27:31Z","oa_version":"Published Version","OA_type":"gold","arxiv":1,"publication_identifier":{"eissn":["2041-1723"]},"file":[{"access_level":"open_access","content_type":"application/pdf","file_size":2226082,"date_created":"2025-09-27T13:32:03Z","checksum":"945926ead9cde464435d456427e2869e","file_name":"s41467-025-63044-7.pdf","file_id":"20403","creator":"gyalniz","date_updated":"2025-09-27T13:32:03Z","relation":"main_file"}],"publication_status":"published","corr_author":"1","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"article_processing_charge":"Yes","publisher":"Springer Nature","volume":16,"author":[{"full_name":"Vasudevan, Mukund","last_name":"Vasudevan","first_name":"Mukund","id":"3C5A959A-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Paranjape, Chaitanya S","last_name":"Paranjape","first_name":"Chaitanya S","id":"3D85B7C4-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Sitte","full_name":"Sitte, Michael Philip","id":"0ba0f1f2-9cfe-11f0-bee6-f95318d225b0","first_name":"Michael Philip"},{"orcid":"0000-0002-8490-9312","first_name":"Gökhan","id":"66E74FA2-D8BF-11E9-8249-8DE2E5697425","full_name":"Yalniz, Gökhan","last_name":"Yalniz"},{"first_name":"Björn","id":"3A374330-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-2057-2754","last_name":"Hof","full_name":"Hof, Björn"}],"article_type":"original","project":[{"grant_number":"662960","_id":"238598C6-32DE-11EA-91FC-C7463DDC885E","name":"Revisiting the Turbulence Problem Using Statistical Mechanics"}],"department":[{"_id":"BjHo"}],"month":"09","acknowledgement":"This work was supported by a grant from the Simons Foundation (662960, BH). We thank Yohann Duguet for helpful discussions, Baofang Song for the initial adaptation of openpipeflow57 to the channel geometry, and Ashley P. Willis for openpipeflow57.","doi":"10.1038/s41467-025-63044-7","oa":1},{"oa":1,"doi":"10.1016/j.matbio.2025.09.002","acknowledgement":"This project was supported by the All May See Foundation 7031,182 to YI, the Louisiana Board of Regents Support Fund: Research Competitiveness Subprogram to MAT, Austrian science fund (FWF) as part of the SFB Meiosis consortium FWF SFB F88-10 to Beatriz Vicoso (supported ME), American Heart Association 16POST2726018 and American Cancer Society 132,123-PF-18–025–01-CSM postdoctoral fellowships to ALZ, National Institutes of Health R01 GM136961 and R35 GM148485 to SH-B, and the Academy of Medical Sciences/the Wellcome Trust/ the Government Department of Business, Energy and Industrial Strategy/the British Heart Foundation/Diabetes UK Springboard Award SBF008\\1115 to YM. \r\nComputational analyses of single-nucleus transcriptome data were performed on the high performance computer (HPC) at Bournemouth University, the HPC at Institute of Science and Technology Austria, and the high-performance computational resources provided by the Louisiana Optical Network Infrastructure (http://www.loni.org). The authors are grateful to the researchers who published the transcriptome datasets [48,49,52,55] that became the essential bases for this study, to FlyBase for curating the datasets in an easily accessible format, and the Drosophila Genomics Resource Center (DGRC), supported by NIH grant 2P40OD010949, for providing the D17 cell line used in this research. The authors thank Kristian Koski (University of Oulu, Finland) for crucial advice on the domain structure of collagen P4H⍺s, and Ryusuke Niwa and Ryo Hoshino (University of Tsukuba, Japan) for helpful discussions on SP.","volume":141,"author":[{"last_name":"Ishikawa","full_name":"Ishikawa, Yoshihiro","first_name":"Yoshihiro"},{"orcid":"0000-0002-9752-7380","first_name":"Melissa A","id":"4E099E4E-F248-11E8-B48F-1D18A9856A87","full_name":"Toups, Melissa A","last_name":"Toups"},{"full_name":"Elkrewi, Marwan N","last_name":"Elkrewi","id":"0B46FACA-A8E1-11E9-9BD3-79D1E5697425","first_name":"Marwan N","orcid":"0000-0002-5328-7231"},{"first_name":"Allison L.","full_name":"Zajac, Allison L.","last_name":"Zajac"},{"first_name":"Sally","last_name":"Horne-Badovinac","full_name":"Horne-Badovinac, Sally"},{"last_name":"Matsubayashi","full_name":"Matsubayashi, Yutaka","first_name":"Yutaka"}],"month":"11","department":[{"_id":"BeVi"}],"article_type":"original","project":[{"name":"The highjacking of meiosis for asexual reproduction","_id":"34ae1506-11ca-11ed-8bc3-c14f4c474396","grant_number":"F8810"}],"article_processing_charge":"Yes (in subscription journal)","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"publisher":"Springer Nature","pmid":1,"publication_status":"published","file":[{"access_level":"open_access","file_size":5844254,"date_created":"2026-01-05T13:09:01Z","success":1,"content_type":"application/pdf","file_name":"2025_MatrixBiology_Ishikawa.pdf","checksum":"764257db41865d19daec1935788f72d7","creator":"dernst","date_updated":"2026-01-05T13:09:01Z","relation":"main_file","file_id":"20948"}],"publication_identifier":{"eissn":["1569-1802"],"issn":["0945-053X"]},"title":"Evidence for the major role of PH4⍺EFB in the prolyl 4-hydroxylation of Drosophila collagen IV","date_created":"2025-09-28T22:01:26Z","OA_type":"hybrid","oa_version":"Published Version","file_date_updated":"2026-01-05T13:09:01Z","publication":"Matrix Biology","date_updated":"2026-01-05T13:09:08Z","isi":1,"PlanS_conform":"1","page":"101-113","status":"public","issue":"11","scopus_import":"1","external_id":{"pmid":["40946811"],"isi":["001583892100002"]},"_id":"20404","abstract":[{"lang":"eng","text":"Collagens are fundamental components of extracellular matrices, requiring precise intracellular post-translational modifications for proper function. Among the modifications, prolyl 4-hydroxylation is critical to stabilise the collagen triple helix. In humans, this reaction is mediated by collagen prolyl 4-hydroxylases (P4Hs). While humans possess three genes encoding these enzymes (P4H⍺s), Drosophila melanogaster harbour at least 26 candidates for collagen P4H⍺s despite its simple genome, and it is poorly understood which of them are actually working on collagen in the fly. In this study, we addressed this question by carrying out thorough bioinformatic and biochemical analyses. We demonstrate that among the 26 potential collagen P4H⍺s, PH4⍺EFB shares the highest homology with vertebrate collagen P4H⍺s. Furthermore, while collagen P4Hs and their substrates must exist in the same cells, our transcriptomic analyses at the tissue and single cell levels showed a global co-expression of PH4⍺EFB but not the other P4H⍺-related genes with the collagen IV genes. Moreover, expression of PH4⍺EFB during embryogenesis was found to precede that of collagen IV, presumably enabling efficient collagen modification by PH4⍺EFB. Finally, biochemical assays confirm that PH4⍺EFB binds collagen, supporting its direct role in collagen IV modification. Collectively, we identify PH4⍺EFB as the primary and potentially constitutive prolyl 4-hydroxylase responsible for collagen IV biosynthesis in Drosophila. Our findings highlight the remarkably simple nature of Drosophila collagen IV biosynthesis, which may serve as a blueprint for defining the minimal requirements for collagen engineering."}],"language":[{"iso":"eng"}],"quality_controlled":"1","type":"journal_article","day":"01","citation":{"chicago":"Ishikawa, Yoshihiro, Melissa A Toups, Marwan N Elkrewi, Allison L. Zajac, Sally Horne-Badovinac, and Yutaka Matsubayashi. “Evidence for the Major Role of PH4⍺EFB in the Prolyl 4-Hydroxylation of Drosophila Collagen IV.” <i>Matrix Biology</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1016/j.matbio.2025.09.002\">https://doi.org/10.1016/j.matbio.2025.09.002</a>.","ama":"Ishikawa Y, Toups MA, Elkrewi MN, Zajac AL, Horne-Badovinac S, Matsubayashi Y. Evidence for the major role of PH4⍺EFB in the prolyl 4-hydroxylation of Drosophila collagen IV. <i>Matrix Biology</i>. 2025;141(11):101-113. doi:<a href=\"https://doi.org/10.1016/j.matbio.2025.09.002\">10.1016/j.matbio.2025.09.002</a>","ista":"Ishikawa Y, Toups MA, Elkrewi MN, Zajac AL, Horne-Badovinac S, Matsubayashi Y. 2025. Evidence for the major role of PH4⍺EFB in the prolyl 4-hydroxylation of Drosophila collagen IV. Matrix Biology. 141(11), 101–113.","apa":"Ishikawa, Y., Toups, M. A., Elkrewi, M. N., Zajac, A. L., Horne-Badovinac, S., &#38; Matsubayashi, Y. (2025). Evidence for the major role of PH4⍺EFB in the prolyl 4-hydroxylation of Drosophila collagen IV. <i>Matrix Biology</i>. Springer Nature. <a href=\"https://doi.org/10.1016/j.matbio.2025.09.002\">https://doi.org/10.1016/j.matbio.2025.09.002</a>","mla":"Ishikawa, Yoshihiro, et al. “Evidence for the Major Role of PH4⍺EFB in the Prolyl 4-Hydroxylation of Drosophila Collagen IV.” <i>Matrix Biology</i>, vol. 141, no. 11, Springer Nature, 2025, pp. 101–13, doi:<a href=\"https://doi.org/10.1016/j.matbio.2025.09.002\">10.1016/j.matbio.2025.09.002</a>.","short":"Y. Ishikawa, M.A. Toups, M.N. Elkrewi, A.L. Zajac, S. Horne-Badovinac, Y. Matsubayashi, Matrix Biology 141 (2025) 101–113.","ieee":"Y. Ishikawa, M. A. Toups, M. N. Elkrewi, A. L. Zajac, S. Horne-Badovinac, and Y. Matsubayashi, “Evidence for the major role of PH4⍺EFB in the prolyl 4-hydroxylation of Drosophila collagen IV,” <i>Matrix Biology</i>, vol. 141, no. 11. Springer Nature, pp. 101–113, 2025."},"has_accepted_license":"1","intvolume":"       141","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","ddc":["570"],"year":"2025","OA_place":"publisher","date_published":"2025-11-01T00:00:00Z"},{"arxiv":1,"publication_identifier":{"eissn":["2330-4022"]},"OA_type":"hybrid","oa_version":"Published Version","date_created":"2025-09-28T22:01:26Z","title":"Observation of analogue dynamic Schwinger effect and non-perturbative light sensing in lead halide perovskites","publication_status":"published","file":[{"access_level":"open_access","success":1,"content_type":"application/pdf","file_size":6609950,"date_created":"2025-10-20T11:02:21Z","checksum":"d42476279287a9a2f8aeafaef032f4a7","file_name":"2025_ACSPhotonics_Lorenc.pdf","file_id":"20502","date_updated":"2025-10-20T11:02:21Z","relation":"main_file","creator":"dernst"}],"publisher":"American Chemical Society","article_processing_charge":"Yes (via OA deal)","corr_author":"1","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"oa":1,"doi":"10.1021/acsphotonics.5c01360","acknowledgement":"A.G.V. thanks Peter Balling for useful discussions. This research was supported by the Scientific Service Units (SSU) of ISTA through resources provided by the Electron Microscopy Facility (EMF), and by the Werner Siemens Foundation (WSS) for financial support.","month":"08","department":[{"_id":"MaIb"},{"_id":"MiLe"},{"_id":"ZhAl"}],"project":[{"name":"HighTE: The Werner Siemens Laboratory for the High Throughput Discovery of Semiconductors for Waste Heat Recovery","_id":"9B8F7476-BA93-11EA-9121-9846C619BF3A"}],"article_type":"original","author":[{"last_name":"Lorenc","full_name":"Lorenc, Dusan","first_name":"Dusan","id":"40D8A3E6-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Volosniev, Artem","last_name":"Volosniev","id":"37D278BC-F248-11E8-B48F-1D18A9856A87","first_name":"Artem","orcid":"0000-0003-0393-5525"},{"full_name":"Zhumekenov, Ayan A.","last_name":"Zhumekenov","first_name":"Ayan A."},{"last_name":"Lee","full_name":"Lee, Seungho","orcid":"0000-0002-6962-8598","id":"BB243B88-D767-11E9-B658-BC13E6697425","first_name":"Seungho"},{"first_name":"Maria","id":"43C61214-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-5013-2843","last_name":"Ibáñez","full_name":"Ibáñez, Maria"},{"full_name":"Bakr, Osman M.","last_name":"Bakr","first_name":"Osman M."},{"full_name":"Lemeshko, Mikhail","last_name":"Lemeshko","orcid":"0000-0002-6990-7802","first_name":"Mikhail","id":"37CB05FA-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Alpichshev","full_name":"Alpichshev, Zhanybek","orcid":"0000-0002-7183-5203","id":"45E67A2A-F248-11E8-B48F-1D18A9856A87","first_name":"Zhanybek"}],"volume":12,"ddc":["540","530"],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","year":"2025","intvolume":"        12","OA_place":"publisher","date_published":"2025-08-11T00:00:00Z","quality_controlled":"1","type":"journal_article","external_id":{"isi":["001547359300001"],"arxiv":["2406.05032"]},"abstract":[{"lang":"eng","text":"Dielectric breakdown of physical vacuum (Schwinger effect) is the textbook demonstration of compatibility of Relativity and Quantum theory. Although observing this effect is still practically unachievable, its analogue generalizations have been shown to be more readily attainable. This paper demonstrates that a gapped Dirac semiconductor, methylammonium lead-bromide perovskite (MAPbBr3), exhibits analogue dynamic Schwinger effect. Tunneling ionization under deep subgap mid-infrared irradiation leads to intense photoluminescence in the visible range, in full agreement with quasi-adiabatic theory. In addition to revealing a gapped extended system suitable for studying the analogue Schwinger effect, this observation holds great potential for nonperturbative field sensing, i.e., sensing electric fields through nonperturbative light-matter interactions. First, this paper illustrates this by measuring the local deviation from the nominally cubic phase of a perovskite single crystal, which can be interpreted in terms of frozen-in fields. Next, it is shown that analogue dynamic Schwinger effect can be used for nonperturbative amplification of nonparametric upconversion process in perovskites driven simultaneously by multiple optical fields. This discovery demonstrates the potential for material response beyond perturbation theory in the tunneling regime, offering extremely sensitive light detection and amplification across an ultrabroad spectral range not accessible by conventional devices."}],"_id":"20405","language":[{"iso":"eng"}],"citation":{"chicago":"Lorenc, Dusan, Artem Volosniev, Ayan A. Zhumekenov, Seungho Lee, Maria Ibáñez, Osman M. Bakr, Mikhail Lemeshko, and Zhanybek Alpichshev. “Observation of Analogue Dynamic Schwinger Effect and Non-Perturbative Light Sensing in Lead Halide Perovskites.” <i>ACS Photonics</i>. American Chemical Society, 2025. <a href=\"https://doi.org/10.1021/acsphotonics.5c01360\">https://doi.org/10.1021/acsphotonics.5c01360</a>.","ista":"Lorenc D, Volosniev A, Zhumekenov AA, Lee S, Ibáñez M, Bakr OM, Lemeshko M, Alpichshev Z. 2025. Observation of analogue dynamic Schwinger effect and non-perturbative light sensing in lead halide perovskites. ACS Photonics. 12(9), 5220–5230.","ama":"Lorenc D, Volosniev A, Zhumekenov AA, et al. Observation of analogue dynamic Schwinger effect and non-perturbative light sensing in lead halide perovskites. <i>ACS Photonics</i>. 2025;12(9):5220-5230. doi:<a href=\"https://doi.org/10.1021/acsphotonics.5c01360\">10.1021/acsphotonics.5c01360</a>","apa":"Lorenc, D., Volosniev, A., Zhumekenov, A. A., Lee, S., Ibáñez, M., Bakr, O. M., … Alpichshev, Z. (2025). Observation of analogue dynamic Schwinger effect and non-perturbative light sensing in lead halide perovskites. <i>ACS Photonics</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acsphotonics.5c01360\">https://doi.org/10.1021/acsphotonics.5c01360</a>","short":"D. Lorenc, A. Volosniev, A.A. Zhumekenov, S. Lee, M. Ibáñez, O.M. Bakr, M. Lemeshko, Z. Alpichshev, ACS Photonics 12 (2025) 5220–5230.","ieee":"D. Lorenc <i>et al.</i>, “Observation of analogue dynamic Schwinger effect and non-perturbative light sensing in lead halide perovskites,” <i>ACS Photonics</i>, vol. 12, no. 9. American Chemical Society, pp. 5220–5230, 2025.","mla":"Lorenc, Dusan, et al. “Observation of Analogue Dynamic Schwinger Effect and Non-Perturbative Light Sensing in Lead Halide Perovskites.” <i>ACS Photonics</i>, vol. 12, no. 9, American Chemical Society, 2025, pp. 5220–30, doi:<a href=\"https://doi.org/10.1021/acsphotonics.5c01360\">10.1021/acsphotonics.5c01360</a>."},"day":"11","has_accepted_license":"1","status":"public","page":"5220-5230","PlanS_conform":"1","scopus_import":"1","issue":"9","file_date_updated":"2025-10-20T11:02:21Z","isi":1,"acknowledged_ssus":[{"_id":"EM-Fac"}],"date_updated":"2025-12-01T12:59:51Z","publication":"ACS Photonics"},{"project":[{"name":"Biomechanics of stem cell fate determination","_id":"628f3fb1-2b32-11ec-9570-83ce778803f7","grant_number":"ALTF 522-2021"},{"grant_number":"851288","call_identifier":"H2020","_id":"05943252-7A3F-11EA-A408-12923DDC885E","name":"Design Principles of Branching Morphogenesis"}],"article_type":"original","department":[{"_id":"EdHa"}],"month":"09","author":[{"id":"55BA52EE-A185-11EA-88FD-18AD3DDC885E","first_name":"Preeti","last_name":"Sahu","full_name":"Sahu, Preeti"},{"last_name":"Monteiro-Ferreira","full_name":"Monteiro-Ferreira, Sara","first_name":"Sara"},{"first_name":"Sara","last_name":"Canato","full_name":"Canato, Sara"},{"full_name":"Soares, Raquel Maia","last_name":"Soares","first_name":"Raquel Maia"},{"first_name":"Adriana","full_name":"Sánchez-Danés, Adriana","last_name":"Sánchez-Danés"},{"orcid":"0000-0001-6005-1561","first_name":"Edouard B","id":"3A9DB764-F248-11E8-B48F-1D18A9856A87","last_name":"Hannezo","full_name":"Hannezo, Edouard B"}],"volume":16,"acknowledgement":"We thank Alois Schlögl, Paula Sanematsu, Susana Moreno Flores, Bernat Corominas-Murtra, Stefania Tavano, Gayathri Singharaju, and Hannezo group members for helpful discussions, the Bioimaging facility at ISTA, as well as Matthias Merkel and Lisa Manning for sharing the 3D Voronoi code. We also thank the Champalimaud animal facility, Anna Pezzarossa and the Champalimaud ABBE platform for the help with microscopy and image processing. This work was supported by EMBO (ALTF 522-2021), a Fundação para a Ciência e Tecnologia grant to A.S.D. (PTDC/MED-ONC/5553/2020), as well as the European Research Council (grant 851288 to EH). A.S.D., S.C., and R.M.S. are supported by QuantOCancer Project Horizon European Union’s Horizon 2020 program (grant agreement No 810653).","oa":1,"doi":"10.1038/s41467-025-62882-9","pmid":1,"publisher":"Springer Nature","corr_author":"1","tmp":{"image":"/images/cc_by_nc_nd.png","short":"CC BY-NC-ND (4.0)","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode"},"article_processing_charge":"Yes","file":[{"file_size":2816813,"date_created":"2025-10-13T12:37:04Z","success":1,"content_type":"application/pdf","access_level":"open_access","file_id":"20464","date_updated":"2025-10-13T12:37:04Z","creator":"dernst","relation":"main_file","file_name":"2025_NatureComm_Sahu.pdf","checksum":"d1656576883b23902545328e2d640234"}],"publication_status":"published","oa_version":"Published Version","OA_type":"gold","title":"Mechanical control of cell fate decisions in the skin epidermis","date_created":"2025-10-05T22:01:34Z","publication_identifier":{"eissn":["2041-1723"]},"acknowledged_ssus":[{"_id":"Bio"}],"isi":1,"publication":"Nature Communications","date_updated":"2025-12-01T12:54:59Z","file_date_updated":"2025-10-13T12:37:04Z","scopus_import":"1","ec_funded":1,"DOAJ_listed":"1","status":"public","has_accepted_license":"1","day":"26","citation":{"ista":"Sahu P, Monteiro-Ferreira S, Canato S, Soares RM, Sánchez-Danés A, Hannezo EB. 2025. Mechanical control of cell fate decisions in the skin epidermis. Nature Communications. 16, 8440.","ama":"Sahu P, Monteiro-Ferreira S, Canato S, Soares RM, Sánchez-Danés A, Hannezo EB. Mechanical control of cell fate decisions in the skin epidermis. <i>Nature Communications</i>. 2025;16. doi:<a href=\"https://doi.org/10.1038/s41467-025-62882-9\">10.1038/s41467-025-62882-9</a>","chicago":"Sahu, Preeti, Sara Monteiro-Ferreira, Sara Canato, Raquel Maia Soares, Adriana Sánchez-Danés, and Edouard B Hannezo. “Mechanical Control of Cell Fate Decisions in the Skin Epidermis.” <i>Nature Communications</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1038/s41467-025-62882-9\">https://doi.org/10.1038/s41467-025-62882-9</a>.","ieee":"P. Sahu, S. Monteiro-Ferreira, S. Canato, R. M. Soares, A. Sánchez-Danés, and E. B. Hannezo, “Mechanical control of cell fate decisions in the skin epidermis,” <i>Nature Communications</i>, vol. 16. Springer Nature, 2025.","short":"P. Sahu, S. Monteiro-Ferreira, S. Canato, R.M. Soares, A. Sánchez-Danés, E.B. Hannezo, Nature Communications 16 (2025).","mla":"Sahu, Preeti, et al. “Mechanical Control of Cell Fate Decisions in the Skin Epidermis.” <i>Nature Communications</i>, vol. 16, 8440, Springer Nature, 2025, doi:<a href=\"https://doi.org/10.1038/s41467-025-62882-9\">10.1038/s41467-025-62882-9</a>.","apa":"Sahu, P., Monteiro-Ferreira, S., Canato, S., Soares, R. M., Sánchez-Danés, A., &#38; Hannezo, E. B. (2025). Mechanical control of cell fate decisions in the skin epidermis. <i>Nature Communications</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41467-025-62882-9\">https://doi.org/10.1038/s41467-025-62882-9</a>"},"type":"journal_article","quality_controlled":"1","_id":"20424","language":[{"iso":"eng"}],"abstract":[{"lang":"eng","text":"Homeostasis relies on a precise balance of fate choices between renewal and differentiation. Although progress has been done to characterize the dynamics of single-cell fate choices, their underlying mechanistic basis often remains unclear. Concentrating on skin epidermis as a paradigm for multilayered tissues with complex fate choices, we develop a 3D vertex-based model with proliferation in the basal layer, showing that mechanical competition for space naturally gives rise to homeostasis and neutral drift dynamics that are seen experimentally. We then explore the effect of introducing mechanical heterogeneities between cellular subpopulations. We uncover that relatively small tension heterogeneities, reflected by distinct morphological changes in single-cell shapes, can be sufficient to heavily tilt cellular dynamics towards exponential growth. We thus derive a master relationship between cell shape and long-term clonal dynamics, which we validated during basal cell carcinoma initiation in mouse epidermis. Altogether, we propose a theoretical framework to link mechanical forces, quantitative cellular morphologies and cellular fate outcomes in complex tissues."}],"external_id":{"pmid":["41006218"],"isi":["001582555200011"]},"date_published":"2025-09-26T00:00:00Z","OA_place":"publisher","year":"2025","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","ddc":["570"],"intvolume":"        16","article_number":"8440"},{"department":[{"_id":"MaIb"}],"month":"09","article_type":"original","author":[{"last_name":"Meng","full_name":"Meng, Weite","first_name":"Weite"},{"full_name":"Xu, Lixiang","last_name":"Xu","first_name":"Lixiang"},{"last_name":"Lu","full_name":"Lu, Shaoqing","first_name":"Shaoqing"},{"full_name":"Li, Mingquan","last_name":"Li","first_name":"Mingquan"},{"full_name":"Li, Mengyao","last_name":"Li","first_name":"Mengyao"},{"last_name":"Zhang","full_name":"Zhang, Yu","first_name":"Yu"},{"first_name":"Qingyue","full_name":"Wang, Qingyue","last_name":"Wang"},{"first_name":"Wen Jun","full_name":"Wang, Wen Jun","last_name":"Wang"},{"first_name":"Siqi","last_name":"Huo","full_name":"Huo, Siqi"},{"first_name":"Miguel A.","full_name":"Bañares, Miguel A.","last_name":"Bañares"},{"first_name":"Marisol","last_name":"Martin-Gonzalez","full_name":"Martin-Gonzalez, Marisol"},{"orcid":"0000-0001-5013-2843","id":"43C61214-F248-11E8-B48F-1D18A9856A87","first_name":"Maria","last_name":"Ibáñez","full_name":"Ibáñez, Maria"},{"first_name":"Andreu","last_name":"Cabot","full_name":"Cabot, Andreu"},{"last_name":"Hong","full_name":"Hong, Min","first_name":"Min"},{"orcid":"0000-0001-7313-6740","id":"2A70014E-F248-11E8-B48F-1D18A9856A87","first_name":"Yu","full_name":"Liu, Yu","last_name":"Liu"},{"first_name":"Khak Ho","full_name":"Lim, Khak Ho","last_name":"Lim"}],"volume":19,"doi":"10.1021/acsnano.5c12627","acknowledgement":"Y.L. acknowledges funding from the National Natural Science Foundation of China (NSFC) (Grant No. 22209034), the Innovation and Entrepreneurship Project of Overseas Returnees in Anhui Province (Grant No. 2022LCX002), and the Fundamental Research Funds for the Central Universities (JZ2024HGTB0239). K.H.L. acknowledges financial support from the National Natural Science Foundation of China (NSFC) (Grant No. 22208293) and the National Foreign Expert Project (Y20240175). Y.Z. acknowledges funding from the NSFC (Grant No. 52502313) and Wenzhou Basic Scientific Research Project (Grant No. G20240034). Q.W. acknowledges the financial support from the NSFC (Grant No. 22208292) and the “Pioneer” and “Leading Goose” R&D Program of Zhejiang (2025C04021). K.H.L. and Q.W. also acknowledge the Research Funds of the Institute of Zhejiang University-Quzhou (Nos. IZQ2022RCZX101, IZQ2021RCZX003, and IZQ2021RCZX002). M.H. acknowledges the funding from the Australian Research Council and the iLAuNCH Trailblazer, Department of Education, Australia. M.H. acknowledges the computational support from the National Computational Infrastructure (NCI), Australia and Pawsey Supercomputing Centre, Australia. The author also thanks Dr. Lijian Huang and Mr. Mincheng Yu at the Institute of Zhejiang University for the swift technical assistance during XPS characterization and quantification.","pmid":1,"publisher":"American Chemical Society","article_processing_charge":"No","publication_status":"published","OA_type":"closed access","oa_version":"None","date_created":"2025-10-05T22:01:35Z","title":"Thiol-Amine complexes for the synthesis and surface engineering of SnTe nanomaterials toward high thermoelectric performance","publication_identifier":{"issn":["1936-0851"],"eissn":["1936-086X"]},"isi":1,"publication":"ACS Nano","date_updated":"2025-12-01T12:50:24Z","scopus_import":"1","issue":"38","status":"public","page":"34395-34407","day":"30","citation":{"apa":"Meng, W., Xu, L., Lu, S., Li, M., Li, M., Zhang, Y., … Lim, K. H. (2025). Thiol-Amine complexes for the synthesis and surface engineering of SnTe nanomaterials toward high thermoelectric performance. <i>ACS Nano</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acsnano.5c12627\">https://doi.org/10.1021/acsnano.5c12627</a>","mla":"Meng, Weite, et al. “Thiol-Amine Complexes for the Synthesis and Surface Engineering of SnTe Nanomaterials toward High Thermoelectric Performance.” <i>ACS Nano</i>, vol. 19, no. 38, American Chemical Society, 2025, pp. 34395–407, doi:<a href=\"https://doi.org/10.1021/acsnano.5c12627\">10.1021/acsnano.5c12627</a>.","ieee":"W. Meng <i>et al.</i>, “Thiol-Amine complexes for the synthesis and surface engineering of SnTe nanomaterials toward high thermoelectric performance,” <i>ACS Nano</i>, vol. 19, no. 38. American Chemical Society, pp. 34395–34407, 2025.","short":"W. Meng, L. Xu, S. Lu, M. Li, M. Li, Y. Zhang, Q. Wang, W.J. Wang, S. Huo, M.A. Bañares, M. Martin-Gonzalez, M. Ibáñez, A. Cabot, M. Hong, Y. Liu, K.H. Lim, ACS Nano 19 (2025) 34395–34407.","chicago":"Meng, Weite, Lixiang Xu, Shaoqing Lu, Mingquan Li, Mengyao Li, Yu Zhang, Qingyue Wang, et al. “Thiol-Amine Complexes for the Synthesis and Surface Engineering of SnTe Nanomaterials toward High Thermoelectric Performance.” <i>ACS Nano</i>. American Chemical Society, 2025. <a href=\"https://doi.org/10.1021/acsnano.5c12627\">https://doi.org/10.1021/acsnano.5c12627</a>.","ama":"Meng W, Xu L, Lu S, et al. Thiol-Amine complexes for the synthesis and surface engineering of SnTe nanomaterials toward high thermoelectric performance. <i>ACS Nano</i>. 2025;19(38):34395-34407. doi:<a href=\"https://doi.org/10.1021/acsnano.5c12627\">10.1021/acsnano.5c12627</a>","ista":"Meng W, Xu L, Lu S, Li M, Li M, Zhang Y, Wang Q, Wang WJ, Huo S, Bañares MA, Martin-Gonzalez M, Ibáñez M, Cabot A, Hong M, Liu Y, Lim KH. 2025. Thiol-Amine complexes for the synthesis and surface engineering of SnTe nanomaterials toward high thermoelectric performance. ACS Nano. 19(38), 34395–34407."},"quality_controlled":"1","type":"journal_article","external_id":{"pmid":["40974325"],"isi":["001575398100001"]},"language":[{"iso":"eng"}],"_id":"20426","abstract":[{"text":"SnTe has attracted significant research interest as a lead-free alternative to PbTe; however, its intrinsically high hole concentration results in an undesirably low Seebeck coefficient and elevated electronic thermal conductivity, thus significantly limiting its thermoelectric (TE) performance. Herein, we present a cost-effective, binary thiol-amine-mediated colloidal synthesis method to synthesize Bi-doped SnTe nanoparticles, eliminating the use of tri-n-octylphosphine-based precursors. The introduction of an electron-rich Bi dopant reduces the hole concentration and increases the Seebeck coefficient. Furthermore, post-synthetic surface treatment with chalcogenidocadmate complexes promotes atomic interdiffusion during annealing and consolidation, leading to compositional redistribution and modulation of the electronic band structure. Density functional theory (DFT) calculations reveal that co-modification via Bi doping and CdSe-derived chalcogen incorporation reduces the energy offset at the valence band maxima from 0.30 eV to 0.10 eV, thereby enhancing valence band degeneracy. The synergistic structural and electronic band structure modulations produce an SnTe-based material with a record high power factor of 2.1 mW m–1 K–2 at 900 K, a maximum TE figure of merit (zT) of 1.2, and a promising theoretical conversion efficiency of 8.3%. This study reports a versatile and scalable colloidal synthesis strategy that integrates hierarchical structural modulation with electronic band engineering, offering a synergistic route to significantly enhance the TE performance.","lang":"eng"}],"date_published":"2025-09-30T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","year":"2025","intvolume":"        19"},{"language":[{"iso":"eng"}],"_id":"20427","abstract":[{"lang":"eng","text":"Animal cells migrating up chemotactic gradients often show speed oscillations. A new study describes a molecular circuit that switches zebrafish germ cells between phases of straight runs, tumbling and directional reorientation."}],"external_id":{"isi":["001592664700001"],"pmid":["40987270"]},"type":"journal_article","quality_controlled":"1","day":"22","citation":{"chicago":"LI, ZIQIANG, and Michael K Sixt. “Cell Migration: How Animal Cells Run and Tumble.” <i>Current Biology</i>. Elsevier, 2025. <a href=\"https://doi.org/10.1016/j.cub.2025.08.016\">https://doi.org/10.1016/j.cub.2025.08.016</a>.","ama":"LI Z, Sixt MK. Cell migration: How animal cells run and tumble. <i>Current Biology</i>. 2025;35(18):R890-R892. doi:<a href=\"https://doi.org/10.1016/j.cub.2025.08.016\">10.1016/j.cub.2025.08.016</a>","ista":"LI Z, Sixt MK. 2025. Cell migration: How animal cells run and tumble. Current Biology. 35(18), R890–R892.","apa":"LI, Z., &#38; Sixt, M. K. (2025). Cell migration: How animal cells run and tumble. <i>Current Biology</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.cub.2025.08.016\">https://doi.org/10.1016/j.cub.2025.08.016</a>","mla":"LI, ZIQIANG, and Michael K. Sixt. “Cell Migration: How Animal Cells Run and Tumble.” <i>Current Biology</i>, vol. 35, no. 18, Elsevier, 2025, pp. R890–92, doi:<a href=\"https://doi.org/10.1016/j.cub.2025.08.016\">10.1016/j.cub.2025.08.016</a>.","ieee":"Z. LI and M. K. Sixt, “Cell migration: How animal cells run and tumble,” <i>Current Biology</i>, vol. 35, no. 18. Elsevier, pp. R890–R892, 2025.","short":"Z. LI, M.K. Sixt, Current Biology 35 (2025) R890–R892."},"intvolume":"        35","year":"2025","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2025-09-22T00:00:00Z","date_updated":"2025-12-01T12:54:02Z","publication":"Current Biology","isi":1,"page":"R890-R892","status":"public","issue":"18","scopus_import":"1","publication_status":"published","publication_identifier":{"eissn":["1879-0445"]},"date_created":"2025-10-05T22:01:35Z","title":"Cell migration: How animal cells run and tumble","oa_version":"None","OA_type":"closed access","doi":"10.1016/j.cub.2025.08.016","author":[{"first_name":"Ziqiang","id":"922e68bb-1727-11ee-857c-966e8cc1b6c3","last_name":"Li","full_name":"Li, Ziqiang"},{"first_name":"Michael K","id":"41E9FBEA-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-6620-9179","last_name":"Sixt","full_name":"Sixt, Michael K"}],"volume":35,"article_type":"letter_note","department":[{"_id":"MiSi"}],"month":"09","corr_author":"1","article_processing_charge":"No","publisher":"Elsevier","pmid":1},{"publication_status":"published","publication_identifier":{"issn":["1745-2473"],"eissn":["1745-2481"]},"oa_version":"Preprint","OA_type":"green","title":"Single-cell migration along and against confined haptotactic gradients","date_created":"2025-10-05T22:01:36Z","acknowledgement":"We thank all the members of our groups for discussions and support. We thank A. Menéndez, S. Usieto, M. Purciolas and E. Coderch for technical assistance. We thank G. Charras (London Centre for Nanotechnology, UK) and M. Sheetz (Columbia University, USA) for sharing cells used in this work. We thank J. Ivaska (University of Turku, Finland) for sharing integrin α5-GFP DNA plasmid. We thank P. Guillamat for technical advice and A. Labernardie for providing the microfluidic channels. We thank M. Gómez-González for sharing the 2D traction microscopy algorithm. Finally, we thank P. Guillamat, J. Abenza, G. Ceada, L. Faure, E. Dalaka, M. Matejčić, A. Beedle, I. Granero, O. Baguer, A. Albajar and N. Chahare for discussions. This paper was funded by the Generalitat de Catalunya (Grant Nos. AGAUR SGR-2017-01602 to X.T. and 2021 SGR 00523 to R.S. and the CERCA Programme and ICREA Academia awards to P.R.-C.), the Spanish Ministry for Science and Innovation MICCINN/FEDER (Grant Nos. PID2021-128635NB-I00, MCIN/AEI/10.13039/501100011033 and ERDF-EU A way of making Europe to X.T., PID2021-128674OB-I00 and CNS2022-135533 to R.S. and PID2019-110298GB-I00 to P.R.-C.), the European Research Council (Grant Nos. 101097753 to P.R.-C. and Adv-883739 to X.T.), Fundació la Marató de TV3 (Project Award 201903-30-31-32 to X.T.), the European Commission (Grant No. H2020-FETPROACT-01-2016-731957 to P.R.-C. and X.T.) and La Caixa Foundation (Grant No. LCF/PR/HR20/52400004 to P.R.-C. and X.T.). R.S. is a Serra-Hunter fellow. D.B.B. was supported by the NOMIS foundation as a NOMIS fellow, by the European Molecular Biology Organization (Postdoctoral Fellowship ALTF 343-2022) and by the Austrian Academy of Sciences through an APART-MINT Fellowship. I.C.F. acknowledges support from the European Foundation for the Study of Chronic Liver Failure. IBEC is recipient of a Severo Ochoa Award of Excellence from MINECO.","doi":"10.1038/s41567-025-03015-3","oa":1,"article_type":"original","project":[{"name":"A mechano-chemical theory for stem cell fate decisions in organoid development","grant_number":"ALTF 343-2022","_id":"34e2a5b5-11ca-11ed-8bc3-b2265616ef0b"}],"department":[{"_id":"EdHa"}],"month":"10","author":[{"first_name":"Isabela Corina","full_name":"Fortunato, Isabela Corina","last_name":"Fortunato"},{"first_name":"David","id":"e1e86031-6537-11eb-953a-f7ab92be508d","orcid":"0000-0001-7205-2975","last_name":"Brückner","full_name":"Brückner, David"},{"first_name":"Steffen","last_name":"Grosser","full_name":"Grosser, Steffen"},{"first_name":"Rohit","last_name":"Nautiyal","full_name":"Nautiyal, Rohit"},{"first_name":"Leone","full_name":"Rossetti, Leone","last_name":"Rossetti"},{"full_name":"Bosch-Padrós, Miquel","last_name":"Bosch-Padrós","first_name":"Miquel"},{"first_name":"Jonel","full_name":"Trebicka, Jonel","last_name":"Trebicka"},{"full_name":"Roca-Cusachs, Pere","last_name":"Roca-Cusachs","first_name":"Pere"},{"full_name":"Sunyer, Raimon","last_name":"Sunyer","first_name":"Raimon"},{"orcid":"0000-0001-6005-1561","id":"3A9DB764-F248-11E8-B48F-1D18A9856A87","first_name":"Edouard B","full_name":"Hannezo, Edouard B","last_name":"Hannezo"},{"full_name":"Trepat, Xavier","last_name":"Trepat","first_name":"Xavier"}],"volume":21,"publisher":"Springer Nature","corr_author":"1","article_processing_charge":"No","type":"journal_article","quality_controlled":"1","abstract":[{"text":"Haptotaxis is the process of directed cell migration along gradients of extracellular matrix density and is central to morphogenesis, immune responses and cancer invasion. It is commonly assumed that cells respond to these gradients by migrating directionally towards the regions of highest ligand density. In contrast with this view, here we show that cells exposed to micropatterned fibronectin gradients exhibit a wide range of complex trajectories, including directed haptotactic migration up the gradient but also linear oscillations and circles with extended periods of migration down the gradient. To explain this behaviour, we developed a biophysical model of haptotactic cell migration based on a coarse-grained molecular clutch model coupled to persistent stochastic polarity dynamics. Although initial haptotactic migration is explained by the differential friction at the front and back of the cell, the observed complex trajectories over longer timescales arise from the interplay between differential friction, persistence and physical confinement. Overall, our study reveals that confinement and persistence modulate the ability of cells to sense and respond to haptotactic cues and provides a framework for understanding how cells navigate complex environments.","lang":"eng"}],"_id":"20431","language":[{"iso":"eng"}],"external_id":{"isi":["001581659900001"]},"citation":{"chicago":"Fortunato, Isabela Corina, David Brückner, Steffen Grosser, Rohit Nautiyal, Leone Rossetti, Miquel Bosch-Padrós, Jonel Trebicka, et al. “Single-Cell Migration along and against Confined Haptotactic Gradients.” <i>Nature Physics</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1038/s41567-025-03015-3\">https://doi.org/10.1038/s41567-025-03015-3</a>.","ama":"Fortunato IC, Brückner D, Grosser S, et al. Single-cell migration along and against confined haptotactic gradients. <i>Nature Physics</i>. 2025;21:1638-1647. doi:<a href=\"https://doi.org/10.1038/s41567-025-03015-3\">10.1038/s41567-025-03015-3</a>","ista":"Fortunato IC, Brückner D, Grosser S, Nautiyal R, Rossetti L, Bosch-Padrós M, Trebicka J, Roca-Cusachs P, Sunyer R, Hannezo EB, Trepat X. 2025. Single-cell migration along and against confined haptotactic gradients. Nature Physics. 21, 1638–1647.","apa":"Fortunato, I. C., Brückner, D., Grosser, S., Nautiyal, R., Rossetti, L., Bosch-Padrós, M., … Trepat, X. (2025). Single-cell migration along and against confined haptotactic gradients. <i>Nature Physics</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41567-025-03015-3\">https://doi.org/10.1038/s41567-025-03015-3</a>","mla":"Fortunato, Isabela Corina, et al. “Single-Cell Migration along and against Confined Haptotactic Gradients.” <i>Nature Physics</i>, vol. 21, Springer Nature, 2025, pp. 1638–47, doi:<a href=\"https://doi.org/10.1038/s41567-025-03015-3\">10.1038/s41567-025-03015-3</a>.","short":"I.C. Fortunato, D. Brückner, S. Grosser, R. Nautiyal, L. Rossetti, M. Bosch-Padrós, J. Trebicka, P. Roca-Cusachs, R. Sunyer, E.B. Hannezo, X. Trepat, Nature Physics 21 (2025) 1638–1647.","ieee":"I. C. Fortunato <i>et al.</i>, “Single-cell migration along and against confined haptotactic gradients,” <i>Nature Physics</i>, vol. 21. Springer Nature, pp. 1638–1647, 2025."},"day":"01","year":"2025","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","intvolume":"        21","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1101/2024.12.02.626413"}],"date_published":"2025-10-01T00:00:00Z","OA_place":"repository","isi":1,"publication":"Nature Physics","date_updated":"2026-01-05T14:26:28Z","page":"1638-1647","status":"public","scopus_import":"1"},{"publisher":"Springer Nature","article_processing_charge":"No","acknowledgement":"We thank A. V. Balatsky, E. Bousquet, A. Disa, S. Kamba, L. Klebl, R. Merlin, A. Srivastava, A. Stroppa, M. Udina, P. Wong and D. Xiao for valuable discussions. M.B. acknowledges support from SNSF Ambizione project number PZ00P2_216089. P.B. and U.N. acknowledge funding from the Deutsche Forschungsgemeinschaft (grant number 541503763). B.F. acknowledges support from the National Science Foundation under grant number NSF DMR-2144086. G.G. acknowledges support from STeP2 number ANR-22-EXES-0013, QuantExt number ANR-23-CE30-0001-01, Audace CEA number ANR-24-RRII-0004 and the École Polytechnique foundation. A.I.K. acknowledges the Nederlandse Organisatie voor Wetenschappelijk Onderzoek (NWO-I) for their financial contribution, including the support of the HFML-FELIX Laboratory. D.M.J. acknowledges support from Tel Aviv University and ERC Starting Grant CHIRALPHONONICS grant number 101166037. S.F.M. acknowledges funding from the Deutsche Forschungsgemeinschaft (grant number 469405347). C.P.R. and N.A.S. were supported by ETH Zurich and by the European Union and Horizon 2020, grant agreement numbers 810451 and 101030352. R.M.G. acknowledges support from the Swedish Research Council (VR starting grant number 2022-03350), the Olle Engkvist Foundation (grant number 229-0443), the Royal Physiographic Society in Lund (Horisont), the Knut and Alice Wallenberg Foundation (grant number 2023.0087) and Chalmers University of Technology via the Department of Physics and the Areas of Advance Nano and Materials Science. Q.N. is supported by the National Natural Science Foundation of China (grant number 12234017) and the National Key Research and Development Program of China (grant number 2023YFA1406300). H.R. acknowledges funding from the Engineering and Physical Sciences Research Council (grant number UKRI122) and Royal Society (grant number IES\\R2\\242309). T.S. acknowledges support from MEXT X-NICS (grant number JPJ011438), NINS OML Project (grant number OML012301) and JST CREST (grant number JPMJCR24R5). H.Z. acknowledges support from the Welch Foundation (grant number C-2128) and the National Science Foundation (grant number DMR-2240106). We acknowledge support from the Centre Européen de Calcul Atomique et Moléculaire (CECAM) in connection to organizing the workshop \"Chiral Phonons in Quantum Materials\", held in 2023, where the idea for this paper emerged.","doi":"10.1038/s41567-025-03001-9","article_type":"original","department":[{"_id":"MiLe"}],"month":"10","volume":21,"author":[{"first_name":"Dominik M.","full_name":"Juraschek, Dominik M.","last_name":"Juraschek"},{"full_name":"Geilhufe, R. Matthias","last_name":"Geilhufe","first_name":"R. Matthias"},{"first_name":"Hanyu","full_name":"Zhu, Hanyu","last_name":"Zhu"},{"full_name":"Basini, Martina","last_name":"Basini","first_name":"Martina"},{"full_name":"Baum, Peter","last_name":"Baum","first_name":"Peter"},{"full_name":"Baydin, Andrey","last_name":"Baydin","first_name":"Andrey"},{"full_name":"Chaudhary, Swati","last_name":"Chaudhary","first_name":"Swati"},{"first_name":"Michael","last_name":"Fechner","full_name":"Fechner, Michael"},{"full_name":"Flebus, Benedetta","last_name":"Flebus","first_name":"Benedetta"},{"last_name":"Grissonnanche","full_name":"Grissonnanche, Gael","first_name":"Gael"},{"full_name":"Kirilyuk, Andrei I.","last_name":"Kirilyuk","first_name":"Andrei I."},{"first_name":"Mikhail","id":"37CB05FA-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-6990-7802","last_name":"Lemeshko","full_name":"Lemeshko, Mikhail"},{"full_name":"Maehrlein, Sebastian F.","last_name":"Maehrlein","first_name":"Sebastian F."},{"last_name":"Mignolet","full_name":"Mignolet, Maxime","first_name":"Maxime"},{"full_name":"Murakami, Shuichi","last_name":"Murakami","first_name":"Shuichi"},{"last_name":"Niu","full_name":"Niu, Qian","first_name":"Qian"},{"full_name":"Nowak, Ulrich","last_name":"Nowak","first_name":"Ulrich"},{"first_name":"Carl P.","full_name":"Romao, Carl P.","last_name":"Romao"},{"last_name":"Rostami","full_name":"Rostami, Habib","first_name":"Habib"},{"first_name":"Takuya","full_name":"Satoh, Takuya","last_name":"Satoh"},{"full_name":"Spaldin, Nicola A.","last_name":"Spaldin","first_name":"Nicola A."},{"last_name":"Ueda","full_name":"Ueda, Hiroki","first_name":"Hiroki"},{"first_name":"Lifa","last_name":"Zhang","full_name":"Zhang, Lifa"}],"publication_identifier":{"eissn":["1745-2481"],"issn":["1745-2473"]},"oa_version":"None","OA_type":"closed access","date_created":"2025-10-05T22:01:37Z","title":"Chiral phonons","publication_status":"published","status":"public","page":"1532-1540","scopus_import":"1","isi":1,"publication":"Nature Physics","date_updated":"2026-01-05T13:25:59Z","year":"2025","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","intvolume":"        21","date_published":"2025-10-01T00:00:00Z","type":"journal_article","quality_controlled":"1","language":[{"iso":"eng"}],"_id":"20432","abstract":[{"lang":"eng","text":"A rapidly increasing body of work reporting phenomena associated with lattice vibrations carrying angular momentum has led to the emergence of the field of chiral phonons. Some of these properties, such as the phonon magnetic moment, also occur in achiral phonons that are circularly or elliptically polarized, while the presence of chirality has additional implications for the types of interaction allowed between the phonons and light, electrons and other quasiparticles. In this Perspective we introduce a framework for classifying phonons with angular momentum, and provide illustrations of the different types using examples from the recent literature. Specifically, we suggest the term ‘axial phonon’ to encompass all phonons that carry angular momentum, real or pseudo, and reserve the term ‘chiral phonon’ for those phonons that break improper rotational symmetry. We hope that this scheme provides clarification on the matter of phonon chirality and will serve as a guide for future research."}],"external_id":{"isi":["001575765100001"]},"citation":{"ama":"Juraschek DM, Geilhufe RM, Zhu H, et al. Chiral phonons. <i>Nature Physics</i>. 2025;21:1532-1540. doi:<a href=\"https://doi.org/10.1038/s41567-025-03001-9\">10.1038/s41567-025-03001-9</a>","ista":"Juraschek DM, Geilhufe RM, Zhu H, Basini M, Baum P, Baydin A, Chaudhary S, Fechner M, Flebus B, Grissonnanche G, Kirilyuk AI, Lemeshko M, Maehrlein SF, Mignolet M, Murakami S, Niu Q, Nowak U, Romao CP, Rostami H, Satoh T, Spaldin NA, Ueda H, Zhang L. 2025. Chiral phonons. Nature Physics. 21, 1532–1540.","chicago":"Juraschek, Dominik M., R. Matthias Geilhufe, Hanyu Zhu, Martina Basini, Peter Baum, Andrey Baydin, Swati Chaudhary, et al. “Chiral Phonons.” <i>Nature Physics</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1038/s41567-025-03001-9\">https://doi.org/10.1038/s41567-025-03001-9</a>.","mla":"Juraschek, Dominik M., et al. “Chiral Phonons.” <i>Nature Physics</i>, vol. 21, Springer Nature, 2025, pp. 1532–40, doi:<a href=\"https://doi.org/10.1038/s41567-025-03001-9\">10.1038/s41567-025-03001-9</a>.","ieee":"D. M. Juraschek <i>et al.</i>, “Chiral phonons,” <i>Nature Physics</i>, vol. 21. Springer Nature, pp. 1532–1540, 2025.","short":"D.M. Juraschek, R.M. Geilhufe, H. Zhu, M. Basini, P. Baum, A. Baydin, S. Chaudhary, M. Fechner, B. Flebus, G. Grissonnanche, A.I. Kirilyuk, M. Lemeshko, S.F. Maehrlein, M. Mignolet, S. Murakami, Q. Niu, U. Nowak, C.P. Romao, H. Rostami, T. Satoh, N.A. Spaldin, H. Ueda, L. Zhang, Nature Physics 21 (2025) 1532–1540.","apa":"Juraschek, D. M., Geilhufe, R. M., Zhu, H., Basini, M., Baum, P., Baydin, A., … Zhang, L. (2025). Chiral phonons. <i>Nature Physics</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41567-025-03001-9\">https://doi.org/10.1038/s41567-025-03001-9</a>"},"day":"01"},{"year":"2025","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2025-06-15T00:00:00Z","OA_place":"repository","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2412.04245","open_access":"1"}],"language":[{"iso":"eng"}],"_id":"20455","abstract":[{"lang":"eng","text":"Despite extensive research since the community learned about adversarial examples 10 years ago, we still do not know how to train high-accuracy classifiers that are guaranteed to be robust to small perturbations of their inputs. Previous works often argued that this might be because no classifier exists that is robust and accurate at the same time. However, in computer vision this assumption does not match reality where humans are usually accurate and robust on most tasks of interest. We offer an alternative explanation and show that in certain settings robust generalization is only possible with unrealistically large amounts of data. Specifically, we find a setting where a robust classifier exists, it is easy to learn an accurate classifier, yet it requires an exponential amount of data to learn a robust classifier. Based on this theoretical result, we evaluate the influence of the amount of training data on datasets such as CIFAR10. Our findings indicate that the the amount of training data is the main factor determining the robust performance. Furthermore we show that that there are low magnitude directions in the data which are useful for non-robust generalization but are not available for robust classifiers. This implies that robust classification is a strictly harder tasks than normal classification, thereby providing an explanation why robust classification requires more data."}],"external_id":{"arxiv":["2412.04245"]},"type":"conference","quality_controlled":"1","day":"15","citation":{"mla":"Prach, Bernd, and Christoph Lampert. “Intriguing Properties of Robust Classification.” <i>2025 IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops</i>, IEEE, 2025, pp. 660–69, doi:<a href=\"https://doi.org/10.1109/CVPRW67362.2025.00071\">10.1109/CVPRW67362.2025.00071</a>.","short":"B. Prach, C. Lampert, in:, 2025 IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops, IEEE, 2025, pp. 660–669.","ieee":"B. Prach and C. Lampert, “Intriguing properties of robust classification,” in <i>2025 IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops</i>, Nashville, TN, United States, 2025, pp. 660–669.","apa":"Prach, B., &#38; Lampert, C. (2025). Intriguing properties of robust classification. In <i>2025 IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops</i> (pp. 660–669). Nashville, TN, United States: IEEE. <a href=\"https://doi.org/10.1109/CVPRW67362.2025.00071\">https://doi.org/10.1109/CVPRW67362.2025.00071</a>","ama":"Prach B, Lampert C. Intriguing properties of robust classification. In: <i>2025 IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops</i>. IEEE; 2025:660-669. doi:<a href=\"https://doi.org/10.1109/CVPRW67362.2025.00071\">10.1109/CVPRW67362.2025.00071</a>","ista":"Prach B, Lampert C. 2025. Intriguing properties of robust classification. 2025 IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops. CVPR: Conference on Computer Vision and Pattern Recognition, 660–669.","chicago":"Prach, Bernd, and Christoph Lampert. “Intriguing Properties of Robust Classification.” In <i>2025 IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops</i>, 660–69. IEEE, 2025. <a href=\"https://doi.org/10.1109/CVPRW67362.2025.00071\">https://doi.org/10.1109/CVPRW67362.2025.00071</a>."},"status":"public","page":"660-669","scopus_import":"1","publication":"2025 IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops","date_updated":"2025-10-13T07:18:26Z","publication_identifier":{"isbn":["9798331599942"],"issn":["2160-7508"],"eissn":["2160-7516"]},"arxiv":1,"title":"Intriguing properties of robust classification","date_created":"2025-10-12T22:01:26Z","oa_version":"Preprint","OA_type":"green","conference":{"name":"CVPR: Conference on Computer Vision and Pattern Recognition","start_date":"2025-06-11","end_date":"2025-06-12","location":"Nashville, TN, United States"},"publication_status":"published","corr_author":"1","article_processing_charge":"No","publisher":"IEEE","related_material":{"record":[{"id":"18874","status":"public","relation":"earlier_version"}]},"doi":"10.1109/CVPRW67362.2025.00071","oa":1,"author":[{"last_name":"Prach","full_name":"Prach, Bernd","id":"2D561D42-C427-11E9-89B4-9C1AE6697425","first_name":"Bernd"},{"orcid":"0000-0001-8622-7887","first_name":"Christoph","id":"40C20FD2-F248-11E8-B48F-1D18A9856A87","full_name":"Lampert, Christoph","last_name":"Lampert"}],"month":"06","department":[{"_id":"ChLa"}]},{"author":[{"orcid":"0000-0003-3036-1475","id":"442E6A6C-F248-11E8-B48F-1D18A9856A87","first_name":"Zhigang","last_name":"Bao","full_name":"Bao, Zhigang"},{"last_name":"Cipolloni","full_name":"Cipolloni, Giorgio","orcid":"0000-0002-4901-7992","id":"42198EFA-F248-11E8-B48F-1D18A9856A87","first_name":"Giorgio"},{"full_name":"Erdös, László","last_name":"Erdös","orcid":"0000-0001-5366-9603","id":"4DBD5372-F248-11E8-B48F-1D18A9856A87","first_name":"László"},{"full_name":"Henheik, Sven Joscha","last_name":"Henheik","first_name":"Sven Joscha","id":"31d731d7-d235-11ea-ad11-b50331c8d7fb","orcid":"0000-0003-1106-327X"},{"orcid":"0000-0003-1491-4623","first_name":"Oleksii","id":"149b70d4-896a-11ed-bdf8-8c63fd44ca61","full_name":"Kolupaiev, Oleksii","last_name":"Kolupaiev"}],"month":"09","department":[{"_id":"LaEr"}],"project":[{"call_identifier":"H2020","_id":"62796744-2b32-11ec-9570-940b20777f1d","grant_number":"101020331","name":"Random matrices beyond Wigner-Dyson-Mehta"}],"article_type":"original","oa":1,"doi":"10.1007/s00440-025-01422-4","acknowledgement":"Open access funding provided by Institute of Science and Technology (IST Austria). Zhigang Bao Supported by Hong Kong RGC Grant GRF 16304724, NSFC12222121 and NSFC12271475. László Erdős, Joscha Henheik and Oleksii Kolupaiev Supported by the ERC Advanced Grant “RMTBeyond” No. 101020331.","article_processing_charge":"Yes (via OA deal)","corr_author":"1","publisher":"Springer Nature","publication_status":"epub_ahead","title":"Decorrelation transition in the Wigner minor process","date_created":"2025-10-16T13:10:26Z","OA_type":"hybrid","oa_version":"Published Version","arxiv":1,"publication_identifier":{"issn":["0178-8051"],"eissn":["1432-2064"]},"publication":"Probability Theory and Related Fields","date_updated":"2025-12-01T15:01:39Z","isi":1,"ec_funded":1,"scopus_import":"1","PlanS_conform":"1","status":"public","day":"20","citation":{"chicago":"Bao, Zhigang, Giorgio Cipolloni, László Erdös, Sven Joscha Henheik, and Oleksii Kolupaiev. “Decorrelation Transition in the Wigner Minor Process.” <i>Probability Theory and Related Fields</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1007/s00440-025-01422-4\">https://doi.org/10.1007/s00440-025-01422-4</a>.","ama":"Bao Z, Cipolloni G, Erdös L, Henheik SJ, Kolupaiev O. Decorrelation transition in the Wigner minor process. <i>Probability Theory and Related Fields</i>. 2025. doi:<a href=\"https://doi.org/10.1007/s00440-025-01422-4\">10.1007/s00440-025-01422-4</a>","ista":"Bao Z, Cipolloni G, Erdös L, Henheik SJ, Kolupaiev O. 2025. Decorrelation transition in the Wigner minor process. Probability Theory and Related Fields.","apa":"Bao, Z., Cipolloni, G., Erdös, L., Henheik, S. J., &#38; Kolupaiev, O. (2025). Decorrelation transition in the Wigner minor process. <i>Probability Theory and Related Fields</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00440-025-01422-4\">https://doi.org/10.1007/s00440-025-01422-4</a>","mla":"Bao, Zhigang, et al. “Decorrelation Transition in the Wigner Minor Process.” <i>Probability Theory and Related Fields</i>, Springer Nature, 2025, doi:<a href=\"https://doi.org/10.1007/s00440-025-01422-4\">10.1007/s00440-025-01422-4</a>.","ieee":"Z. Bao, G. Cipolloni, L. Erdös, S. J. Henheik, and O. Kolupaiev, “Decorrelation transition in the Wigner minor process,” <i>Probability Theory and Related Fields</i>. Springer Nature, 2025.","short":"Z. Bao, G. Cipolloni, L. Erdös, S.J. Henheik, O. Kolupaiev, Probability Theory and Related Fields (2025)."},"external_id":{"isi":["001574640900001"],"arxiv":["2503.06549"]},"_id":"20478","language":[{"iso":"eng"}],"abstract":[{"text":"We consider the Wigner minor process, i.e. the eigenvalues of an N\\times N Wigner matrix H^{(N)} together with the eigenvalues of all its n\\times n minors, H^{(n)}, n\\le N. The top eigenvalues of H^{(N)} and those of its immediate minor H^{(N-1)} are very strongly correlated, but this correlation becomes weaker for smaller minors H^{(N-k)} as k increases. For the GUE minor process the critical transition regime around k\\sim N^{2/3} was analyzed by Forrester and Nagao (J. Stat. Mech.: Theory and Experiment, 2011) providing an explicit formula for the nontrivial joint correlation function. We prove that this formula is universal, i.e. it holds for the Wigner minor process. Moreover, we give a complete analysis of the sub- and supercritical regimes both for eigenvalues and for the corresponding eigenvector overlaps, thus we prove the decorrelation transition in full generality.","lang":"eng"}],"quality_controlled":"1","type":"journal_article","OA_place":"publisher","date_published":"2025-09-20T00:00:00Z","main_file_link":[{"url":"https://doi.org/10.1007/s00440-025-01422-4","open_access":"1"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","year":"2025"},{"related_material":{"record":[{"relation":"research_data","status":"public","id":"20523"}]},"publisher":"American Physical Society","article_processing_charge":"Yes (via OA deal)","corr_author":"1","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"department":[{"_id":"ScWa"}],"month":"09","project":[{"name":"Tribocharge: a multi-scale approach to an enduring problem in physics","_id":"0aa60e99-070f-11eb-9043-a6de6bdc3afa","call_identifier":"H2020","grant_number":"949120"}],"article_type":"original","volume":135,"author":[{"orcid":"0000-0003-0463-5794","id":"6313aec0-15b2-11ec-abd3-ed67d16139af","first_name":"Felix","last_name":"Pertl","full_name":"Pertl, Felix"},{"full_name":"Lenton, Isaac C","last_name":"Lenton","id":"a550210f-223c-11ec-8182-e2d45e817efb","first_name":"Isaac C","orcid":"0000-0002-5010-6984"},{"first_name":"Tobias","full_name":"Cramer, Tobias","last_name":"Cramer"},{"orcid":"0000-0002-2299-3176","id":"3A1FFC16-F248-11E8-B48F-1D18A9856A87","first_name":"Scott R","full_name":"Waitukaitis, Scott R","last_name":"Waitukaitis"}],"oa":1,"doi":"10.1103/lcsm-xxty","acknowledgement":"This project has received funding from the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (Grant agreement No. 949120). This research was supported by the Scientific Service Units of The Institute of Science and Technology Austria (ISTA) through resources provided by the Miba Machine Shop, the Nanofabrication Facility and Lab Support Facility.","OA_type":"hybrid","oa_version":"Published Version","date_created":"2025-10-16T13:13:29Z","title":"No time for surface charge: How bulk conductivity hides charge patterns from Kelvin probe force microscopy in contact-electrified surfaces","arxiv":1,"publication_identifier":{"issn":["0031-9007"],"eissn":["1079-7114"]},"file":[{"access_level":"open_access","success":1,"content_type":"application/pdf","file_size":1692251,"date_created":"2025-10-23T09:32:31Z","checksum":"7e45e89b8db0b7f01e63185c68e4b0f9","file_name":"2025_PhysReviewLetters_Pertl.pdf","file_id":"20522","date_updated":"2025-10-23T09:32:31Z","relation":"main_file","creator":"dernst"}],"publication_status":"published","scopus_import":"1","issue":"14","ec_funded":1,"status":"public","PlanS_conform":"1","isi":1,"acknowledged_ssus":[{"_id":"M-Shop"},{"_id":"NanoFab"},{"_id":"LifeSc"}],"publication":"Physical Review Letters","date_updated":"2025-12-01T14:57:53Z","file_date_updated":"2025-10-23T09:32:31Z","OA_place":"publisher","date_published":"2025-09-30T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","ddc":["530"],"year":"2025","article_number":"146202","intvolume":"       135","citation":{"ama":"Pertl F, Lenton IC, Cramer T, Waitukaitis SR. No time for surface charge: How bulk conductivity hides charge patterns from Kelvin probe force microscopy in contact-electrified surfaces. <i>Physical Review Letters</i>. 2025;135(14). doi:<a href=\"https://doi.org/10.1103/lcsm-xxty\">10.1103/lcsm-xxty</a>","ista":"Pertl F, Lenton IC, Cramer T, Waitukaitis SR. 2025. No time for surface charge: How bulk conductivity hides charge patterns from Kelvin probe force microscopy in contact-electrified surfaces. Physical Review Letters. 135(14), 146202.","chicago":"Pertl, Felix, Isaac C Lenton, Tobias Cramer, and Scott R Waitukaitis. “No Time for Surface Charge: How Bulk Conductivity Hides Charge Patterns from Kelvin Probe Force Microscopy in Contact-Electrified Surfaces.” <i>Physical Review Letters</i>. American Physical Society, 2025. <a href=\"https://doi.org/10.1103/lcsm-xxty\">https://doi.org/10.1103/lcsm-xxty</a>.","mla":"Pertl, Felix, et al. “No Time for Surface Charge: How Bulk Conductivity Hides Charge Patterns from Kelvin Probe Force Microscopy in Contact-Electrified Surfaces.” <i>Physical Review Letters</i>, vol. 135, no. 14, 146202, American Physical Society, 2025, doi:<a href=\"https://doi.org/10.1103/lcsm-xxty\">10.1103/lcsm-xxty</a>.","short":"F. Pertl, I.C. Lenton, T. Cramer, S.R. Waitukaitis, Physical Review Letters 135 (2025).","ieee":"F. Pertl, I. C. Lenton, T. Cramer, and S. R. Waitukaitis, “No time for surface charge: How bulk conductivity hides charge patterns from Kelvin probe force microscopy in contact-electrified surfaces,” <i>Physical Review Letters</i>, vol. 135, no. 14. American Physical Society, 2025.","apa":"Pertl, F., Lenton, I. C., Cramer, T., &#38; Waitukaitis, S. R. (2025). No time for surface charge: How bulk conductivity hides charge patterns from Kelvin probe force microscopy in contact-electrified surfaces. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/lcsm-xxty\">https://doi.org/10.1103/lcsm-xxty</a>"},"day":"30","has_accepted_license":"1","quality_controlled":"1","type":"journal_article","external_id":{"isi":["001587263900003"],"arxiv":["2502.12718"]},"abstract":[{"text":"Kelvin probe force microscopy (KPFM) is widely used in stationary and dynamic studies of contact electrification. An obvious question that connects these two has been overlooked: when are charge dynamics too fast for stationary studies to be meaningful? Using a rapid transfer system to quickly perform KPFM after contact, we find the dynamics are too fast in all but the best insulators. Our data further suggest that dynamics are caused by bulk as opposed to surface conductivity, and that charge-transfer heterogeneity is less prevalent than previously suggested.","lang":"eng"}],"_id":"20481","language":[{"iso":"eng"}]},{"oa_version":"Preprint","OA_type":"green","date_created":"2025-10-19T22:01:31Z","title":"Flips in two-dimensional hypertriangulations","arxiv":1,"publication_identifier":{"issn":["0195-6698"]},"publication_status":"epub_ahead","publisher":"Elsevier","corr_author":"1","article_processing_charge":"No","project":[{"call_identifier":"H2020","_id":"266A2E9E-B435-11E9-9278-68D0E5697425","grant_number":"788183","name":"Alpha Shape Theory Extended"},{"name":"Mathematics, Computer Science","call_identifier":"FWF","_id":"268116B8-B435-11E9-9278-68D0E5697425","grant_number":"Z00342"},{"call_identifier":"FWF","_id":"2561EBF4-B435-11E9-9278-68D0E5697425","grant_number":"I02979-N35","name":"Persistence and stability of geometric complexes"}],"article_type":"original","department":[{"_id":"HeEd"}],"month":"10","volume":132,"author":[{"full_name":"Edelsbrunner, Herbert","last_name":"Edelsbrunner","orcid":"0000-0002-9823-6833","first_name":"Herbert","id":"3FB178DA-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Garber, Alexey","last_name":"Garber","first_name":"Alexey"},{"first_name":"Mohadese","full_name":"Ghafari, Mohadese","last_name":"Ghafari"},{"orcid":"0000-0002-1780-2689","id":"4879BB4E-F248-11E8-B48F-1D18A9856A87","first_name":"Teresa","last_name":"Heiss","full_name":"Heiss, Teresa"},{"id":"f86f7148-b140-11ec-9577-95435b8df824","first_name":"Morteza","last_name":"Saghafian","full_name":"Saghafian, Morteza"}],"acknowledgement":"Work by all authors but the second is supported by the European Research Council (ERC), grant no. 788183, by the Wittgenstein Prize, Austrian Science Fund (FWF), grant no. Z 342-N31, and by the DFG Collaborative Research Center TRR 109, Austrian Science Fund (FWF), grant no. I 02979-N35. Work by the second author is partially supported by the Alexander von Humboldt Foundation and by the Simons Foundation . The second author thanks Jesús A. De Loera for useful discussions on flips and non-flips and Pavel Galashin and Alexey Balitskiy for useful discussions on plabic graphs.","doi":"10.1016/j.ejc.2025.104248","oa":1,"main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2212.11380"}],"date_published":"2025-10-10T00:00:00Z","OA_place":"repository","year":"2025","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","intvolume":"       132","article_number":"104248","citation":{"ama":"Edelsbrunner H, Garber A, Ghafari M, Heiss T, Saghafian M. Flips in two-dimensional hypertriangulations. <i>European Journal of Combinatorics</i>. 2025;132. doi:<a href=\"https://doi.org/10.1016/j.ejc.2025.104248\">10.1016/j.ejc.2025.104248</a>","ista":"Edelsbrunner H, Garber A, Ghafari M, Heiss T, Saghafian M. 2025. Flips in two-dimensional hypertriangulations. European Journal of Combinatorics. 132, 104248.","chicago":"Edelsbrunner, Herbert, Alexey Garber, Mohadese Ghafari, Teresa Heiss, and Morteza Saghafian. “Flips in Two-Dimensional Hypertriangulations.” <i>European Journal of Combinatorics</i>. Elsevier, 2025. <a href=\"https://doi.org/10.1016/j.ejc.2025.104248\">https://doi.org/10.1016/j.ejc.2025.104248</a>.","mla":"Edelsbrunner, Herbert, et al. “Flips in Two-Dimensional Hypertriangulations.” <i>European Journal of Combinatorics</i>, vol. 132, 104248, Elsevier, 2025, doi:<a href=\"https://doi.org/10.1016/j.ejc.2025.104248\">10.1016/j.ejc.2025.104248</a>.","short":"H. Edelsbrunner, A. Garber, M. Ghafari, T. Heiss, M. Saghafian, European Journal of Combinatorics 132 (2025).","ieee":"H. Edelsbrunner, A. Garber, M. Ghafari, T. Heiss, and M. Saghafian, “Flips in two-dimensional hypertriangulations,” <i>European Journal of Combinatorics</i>, vol. 132. Elsevier, 2025.","apa":"Edelsbrunner, H., Garber, A., Ghafari, M., Heiss, T., &#38; Saghafian, M. (2025). Flips in two-dimensional hypertriangulations. <i>European Journal of Combinatorics</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.ejc.2025.104248\">https://doi.org/10.1016/j.ejc.2025.104248</a>"},"day":"10","type":"journal_article","quality_controlled":"1","_id":"20490","abstract":[{"text":"We study flips in hypertriangulations of planar points sets. Here a level-k hypertriangulation of n\r\n points in the plane is a subdivision induced by the projection of a k-hypersimplex, which is the convex hull of the barycenters of the (k-1)-dimensional faces of the standard (n-1)-simplex. In particular, we introduce four types of flips and prove that the level-2 hypertriangulations are connected by these flips.\r\n","lang":"eng"}],"language":[{"iso":"eng"}],"external_id":{"arxiv":["2212.11380"],"isi":["001599061500002"]},"scopus_import":"1","ec_funded":1,"status":"public","isi":1,"date_updated":"2025-12-01T12:57:29Z","publication":"European Journal of Combinatorics"},{"_id":"20496","abstract":[{"text":"The practical implementation of aqueous zinc-ion batteries (AZIBs) is limited by uncontrolled zinc (Zn) dendrite growth during anode plating, compromising both safety and cycle life. Typically, Zn plating proceeds via 2D growth along the six equivalent prismatic [1010] directions of the hexagonal close-packed (HCP) Zn lattice, forming hexagonal platelets that promote dendrite formation. Here, an effective electrolyte engineering strategy is presented using rare-earth ions to regulate Zn plating. Combined multiscale experimental analyses and computational modeling reveal that these ions preferentially adsorb onto the prismatic {1010} facets, suppressing lateral epitaxial growth of the basal (0002) planes. This redirects Zn plating toward an apparent screw dislocation-driven growth along the [0001] axis. The resulting growth pathway, together with randomly oriented Zn nucleation, yields dense, uniform, and dendrite-free Zn layers with markedly improved cycling stability and high depth-of-discharge operation, thereby challenging the prevailing assumption that dendrite suppression requires (0002)-oriented growth parallel to the substrate. This work provides new mechanistic insights into Zn plating dynamics and establishes a scalable strategy for stable, dendrite-free Zn anodes in next-generation AZIBs.","lang":"eng"}],"language":[{"iso":"eng"}],"external_id":{"pmid":["41025826"],"isi":["001583809400001"]},"type":"journal_article","quality_controlled":"1","has_accepted_license":"1","citation":{"ama":"Zeng G, Horta S, Sun Q, et al. Crystal growth engineering for dendrite-free Zinc metal plating. <i>Advanced Materials</i>. 2025. doi:<a href=\"https://doi.org/10.1002/adma.202510906\">10.1002/adma.202510906</a>","ista":"Zeng G, Horta S, Sun Q, Khan MD, Ibáñez M, Han Y, Wang S, Li L, Ci L, Tian Y, Cabot A. 2025. Crystal growth engineering for dendrite-free Zinc metal plating. Advanced Materials., e10906.","chicago":"Zeng, Guifang, Sharona Horta, Qing Sun, Malik Dilshad Khan, Maria Ibáñez, Yuhang Han, Shang Wang, et al. “Crystal Growth Engineering for Dendrite-Free Zinc Metal Plating.” <i>Advanced Materials</i>. Wiley, 2025. <a href=\"https://doi.org/10.1002/adma.202510906\">https://doi.org/10.1002/adma.202510906</a>.","mla":"Zeng, Guifang, et al. “Crystal Growth Engineering for Dendrite-Free Zinc Metal Plating.” <i>Advanced Materials</i>, e10906, Wiley, 2025, doi:<a href=\"https://doi.org/10.1002/adma.202510906\">10.1002/adma.202510906</a>.","short":"G. Zeng, S. Horta, Q. Sun, M.D. Khan, M. Ibáñez, Y. Han, S. Wang, L. Li, L. Ci, Y. Tian, A. Cabot, Advanced Materials (2025).","ieee":"G. Zeng <i>et al.</i>, “Crystal growth engineering for dendrite-free Zinc metal plating,” <i>Advanced Materials</i>. Wiley, 2025.","apa":"Zeng, G., Horta, S., Sun, Q., Khan, M. D., Ibáñez, M., Han, Y., … Cabot, A. (2025). Crystal growth engineering for dendrite-free Zinc metal plating. <i>Advanced Materials</i>. Wiley. <a href=\"https://doi.org/10.1002/adma.202510906\">https://doi.org/10.1002/adma.202510906</a>"},"day":"30","article_number":"e10906","year":"2025","ddc":["530"],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2025-09-30T00:00:00Z","OA_place":"publisher","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1002/adma.202510906"}],"date_updated":"2025-12-01T12:56:48Z","publication":"Advanced Materials","acknowledged_ssus":[{"_id":"NanoFab"},{"_id":"EM-Fac"}],"isi":1,"PlanS_conform":"1","status":"public","scopus_import":"1","publication_status":"epub_ahead","publication_identifier":{"issn":["0935-9648"],"eissn":["1521-4095"]},"date_created":"2025-10-19T22:01:32Z","title":"Crystal growth engineering for dendrite-free Zinc metal plating","oa_version":"Published Version","OA_type":"hybrid","acknowledgement":"M.I. and S.H. acknowledge financial support from ISTA and the Werner Siemens Foundation. Q.S. acknowledges financial support from the European Union's Horizon Europe Research and Innovation Programme under the Marie Skłodowska-Curie Grant Agreement No. 101211154. This work was supported by the Generalitat de Catalunya (Grant No. 2021SGR01581), the National Natural Science Foundation of China (Grant Nos. 52125505 and 52475336), and the Joint Fund of Henan Province Science and Technology R&D Program (Grant No. 235200810097). Part of this research was carried out with support from the Scientific Service Units (SSU) of the Institute of Science and Technology Austria (ISTA), utilizing resources provided by the Electron Microscopy Facility (EMF) and the Nanofabrication Facility (NFF).","oa":1,"doi":"10.1002/adma.202510906","author":[{"first_name":"Guifang","last_name":"Zeng","full_name":"Zeng, Guifang"},{"id":"03a7e858-01b1-11ec-8b71-99ae6c4a05bc","first_name":"Sharona","full_name":"Horta, Sharona","last_name":"Horta"},{"last_name":"Sun","full_name":"Sun, Qing","first_name":"Qing"},{"last_name":"Khan","full_name":"Khan, Malik Dilshad","first_name":"Malik Dilshad"},{"last_name":"Ibáñez","full_name":"Ibáñez, Maria","orcid":"0000-0001-5013-2843","first_name":"Maria","id":"43C61214-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Han, Yuhang","last_name":"Han","first_name":"Yuhang"},{"full_name":"Wang, Shang","last_name":"Wang","first_name":"Shang"},{"first_name":"Longqiu","full_name":"Li, Longqiu","last_name":"Li"},{"first_name":"Lijie","last_name":"Ci","full_name":"Ci, Lijie"},{"first_name":"Yanhong","last_name":"Tian","full_name":"Tian, Yanhong"},{"first_name":"Andreu","full_name":"Cabot, Andreu","last_name":"Cabot"}],"article_type":"original","project":[{"_id":"9B8F7476-BA93-11EA-9121-9846C619BF3A","name":"HighTE: The Werner Siemens Laboratory for the High Throughput Discovery of Semiconductors for Waste Heat Recovery"}],"department":[{"_id":"MaIb"}],"month":"09","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"article_processing_charge":"Yes (in subscription journal)","publisher":"Wiley","pmid":1}]