---
_id: '13416'
abstract:
- lang: eng
  text: The reversible molecular template-directed self-assembly of gold nanoparticles
    (AuNPs), a process which relies solely on noncovalent bonding interactions, has
    been demonstrated by high-resolution transmission electron microscopy (HR-TEM).
    By employing a well-known host−guest binding motif, the AuNPs have been systemized
    into discrete dimers, trimers, and tetramers. These nanoparticulate twins, triplets,
    and quadruplets, which can be disassembled and reassembled either chemically or
    electrochemically, can be coalesced into larger, permanent polygonal structures
    by thermal treatment using a focused HR-TEM electron beam.
article_processing_charge: No
article_type: original
author:
- first_name: Mark A.
  full_name: Olson, Mark A.
  last_name: Olson
- first_name: Ali
  full_name: Coskun, Ali
  last_name: Coskun
- first_name: Rafal
  full_name: Klajn, Rafal
  id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
  last_name: Klajn
- first_name: Lei
  full_name: Fang, Lei
  last_name: Fang
- first_name: Sanjeev K.
  full_name: Dey, Sanjeev K.
  last_name: Dey
- first_name: Kevin P.
  full_name: Browne, Kevin P.
  last_name: Browne
- first_name: Bartosz A.
  full_name: Grzybowski, Bartosz A.
  last_name: Grzybowski
- first_name: J. Fraser
  full_name: Stoddart, J. Fraser
  last_name: Stoddart
citation:
  ama: Olson MA, Coskun A, Klajn R, et al. Assembly of polygonal nanoparticle clusters
    directed by reversible noncovalent bonding interactions. <i>Nano Letters</i>.
    2009;9(9):3185-3190. doi:<a href="https://doi.org/10.1021/nl901385c">10.1021/nl901385c</a>
  apa: Olson, M. A., Coskun, A., Klajn, R., Fang, L., Dey, S. K., Browne, K. P., …
    Stoddart, J. F. (2009). Assembly of polygonal nanoparticle clusters directed by
    reversible noncovalent bonding interactions. <i>Nano Letters</i>. American Chemical
    Society. <a href="https://doi.org/10.1021/nl901385c">https://doi.org/10.1021/nl901385c</a>
  chicago: Olson, Mark A., Ali Coskun, Rafal Klajn, Lei Fang, Sanjeev K. Dey, Kevin
    P. Browne, Bartosz A. Grzybowski, and J. Fraser Stoddart. “Assembly of Polygonal
    Nanoparticle Clusters Directed by Reversible Noncovalent Bonding Interactions.”
    <i>Nano Letters</i>. American Chemical Society, 2009. <a href="https://doi.org/10.1021/nl901385c">https://doi.org/10.1021/nl901385c</a>.
  ieee: M. A. Olson <i>et al.</i>, “Assembly of polygonal nanoparticle clusters directed
    by reversible noncovalent bonding interactions,” <i>Nano Letters</i>, vol. 9,
    no. 9. American Chemical Society, pp. 3185–3190, 2009.
  ista: Olson MA, Coskun A, Klajn R, Fang L, Dey SK, Browne KP, Grzybowski BA, Stoddart
    JF. 2009. Assembly of polygonal nanoparticle clusters directed by reversible noncovalent
    bonding interactions. Nano Letters. 9(9), 3185–3190.
  mla: Olson, Mark A., et al. “Assembly of Polygonal Nanoparticle Clusters Directed
    by Reversible Noncovalent Bonding Interactions.” <i>Nano Letters</i>, vol. 9,
    no. 9, American Chemical Society, 2009, pp. 3185–90, doi:<a href="https://doi.org/10.1021/nl901385c">10.1021/nl901385c</a>.
  short: M.A. Olson, A. Coskun, R. Klajn, L. Fang, S.K. Dey, K.P. Browne, B.A. Grzybowski,
    J.F. Stoddart, Nano Letters 9 (2009) 3185–3190.
date_created: 2023-08-01T10:29:27Z
date_published: 2009-09-09T00:00:00Z
date_updated: 2023-08-08T08:57:34Z
day: '09'
doi: 10.1021/nl901385c
extern: '1'
external_id:
  pmid:
  - '19694461'
intvolume: '         9'
issue: '9'
keyword:
- Mechanical Engineering
- Condensed Matter Physics
- General Materials Science
- General Chemistry
- Bioengineering
language:
- iso: eng
month: '09'
oa_version: None
page: 3185-3190
pmid: 1
publication: Nano Letters
publication_identifier:
  eissn:
  - 1530-6992
  issn:
  - 1530-6984
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Assembly of polygonal nanoparticle clusters directed by reversible noncovalent
  bonding interactions
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 9
year: '2009'
...
---
_id: '13417'
abstract:
- lang: eng
  text: 'Mission Impossible: Metal nanoparticles (NPs) coated with photoresponsive
    ligands are used as “inks” for self-erasing “paper” whereby light-induced self-assembly
    of the NPs is transduced into local color changes (see picture). Depending on
    the degree of self-assembly, multicolor images can be written using only one type
    of NP ink. Duration of image erasure is regulated by the surface concentration
    of photoactive groups and can range from seconds to days.'
article_processing_charge: No
article_type: original
author:
- first_name: Rafal
  full_name: Klajn, Rafal
  id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
  last_name: Klajn
- first_name: Paul J.
  full_name: Wesson, Paul J.
  last_name: Wesson
- first_name: Kyle J. M.
  full_name: Bishop, Kyle J. M.
  last_name: Bishop
- first_name: Bartosz A.
  full_name: Grzybowski, Bartosz A.
  last_name: Grzybowski
citation:
  ama: Klajn R, Wesson PJ, Bishop KJM, Grzybowski BA. Writing self-erasing images
    using metastable nanoparticle “inks.” <i>Angewandte Chemie International Edition</i>.
    2009;48(38):7035-7039. doi:<a href="https://doi.org/10.1002/anie.200901119">10.1002/anie.200901119</a>
  apa: Klajn, R., Wesson, P. J., Bishop, K. J. M., &#38; Grzybowski, B. A. (2009).
    Writing self-erasing images using metastable nanoparticle “inks.” <i>Angewandte
    Chemie International Edition</i>. Wiley. <a href="https://doi.org/10.1002/anie.200901119">https://doi.org/10.1002/anie.200901119</a>
  chicago: Klajn, Rafal, Paul J. Wesson, Kyle J. M. Bishop, and Bartosz A. Grzybowski.
    “Writing Self-Erasing Images Using Metastable Nanoparticle ‘Inks.’” <i>Angewandte
    Chemie International Edition</i>. Wiley, 2009. <a href="https://doi.org/10.1002/anie.200901119">https://doi.org/10.1002/anie.200901119</a>.
  ieee: R. Klajn, P. J. Wesson, K. J. M. Bishop, and B. A. Grzybowski, “Writing self-erasing
    images using metastable nanoparticle ‘inks,’” <i>Angewandte Chemie International
    Edition</i>, vol. 48, no. 38. Wiley, pp. 7035–7039, 2009.
  ista: Klajn R, Wesson PJ, Bishop KJM, Grzybowski BA. 2009. Writing self-erasing
    images using metastable nanoparticle “inks”. Angewandte Chemie International Edition.
    48(38), 7035–7039.
  mla: Klajn, Rafal, et al. “Writing Self-Erasing Images Using Metastable Nanoparticle
    ‘Inks.’” <i>Angewandte Chemie International Edition</i>, vol. 48, no. 38, Wiley,
    2009, pp. 7035–39, doi:<a href="https://doi.org/10.1002/anie.200901119">10.1002/anie.200901119</a>.
  short: R. Klajn, P.J. Wesson, K.J.M. Bishop, B.A. Grzybowski, Angewandte Chemie
    International Edition 48 (2009) 7035–7039.
date_created: 2023-08-01T10:29:38Z
date_published: 2009-09-01T00:00:00Z
date_updated: 2023-08-08T08:59:15Z
day: '01'
doi: 10.1002/anie.200901119
extern: '1'
external_id:
  pmid:
  - '19533698'
intvolume: '        48'
issue: '38'
keyword:
- General Chemistry
- Catalysis
language:
- iso: eng
month: '09'
oa_version: None
page: 7035-7039
pmid: 1
publication: Angewandte Chemie International Edition
publication_identifier:
  eissn:
  - 1521-3773
  issn:
  - 1433-7851
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: Writing self-erasing images using metastable nanoparticle “inks”
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 48
year: '2009'
...
---
_id: '13418'
abstract:
- lang: eng
  text: In traditional photoconductors1,2,3, the impinging light generates mobile
    charge carriers in the valence and/or conduction bands, causing the material’s
    conductivity to increase4. Such positive photoconductance is observed in both
    bulk and nanostructured5,6 photoconductors. Here we describe a class of nanoparticle-based
    materials whose conductivity can either increase or decrease on irradiation with
    visible light of wavelengths close to the particles’ surface plasmon resonance.
    The remarkable feature of these plasmonic materials is that the sign of the conductivity
    change and the nature of the electron transport between the nanoparticles depend
    on the molecules comprising the self-assembled monolayers (SAMs)7,8 stabilizing
    the nanoparticles. For SAMs made of electrically neutral (polar and non-polar)
    molecules, conductivity increases on irradiation. If, however, the SAMs contain
    electrically charged (either negatively or positively) groups, conductivity decreases.
    The optical and electrical characteristics of these previously undescribed inverse
    photoconductors can be engineered flexibly by adjusting the material properties
    of the nanoparticles and of the coating SAMs. In particular, in films comprising
    mixtures of different nanoparticles or nanoparticles coated with mixed SAMs, the
    overall photoconductance is a weighted average of the changes induced by the individual
    components. These and other observations can be rationalized in terms of light-induced
    creation of mobile charge carriers whose transport through the charged SAMs is
    inhibited by carrier trapping in transient polaron-like states9,10. The nanoparticle-based
    photoconductors we describe could have uses in chemical sensors and/or in conjunction
    with flexible substrates.
article_processing_charge: No
article_type: original
author:
- first_name: Hideyuki
  full_name: Nakanishi, Hideyuki
  last_name: Nakanishi
- first_name: Kyle J. M.
  full_name: Bishop, Kyle J. M.
  last_name: Bishop
- first_name: Bartlomiej
  full_name: Kowalczyk, Bartlomiej
  last_name: Kowalczyk
- first_name: Abraham
  full_name: Nitzan, Abraham
  last_name: Nitzan
- first_name: Emily A.
  full_name: Weiss, Emily A.
  last_name: Weiss
- first_name: Konstantin V.
  full_name: Tretiakov, Konstantin V.
  last_name: Tretiakov
- first_name: Mario M.
  full_name: Apodaca, Mario M.
  last_name: Apodaca
- first_name: Rafal
  full_name: Klajn, Rafal
  id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
  last_name: Klajn
- first_name: J. Fraser
  full_name: Stoddart, J. Fraser
  last_name: Stoddart
- first_name: Bartosz A.
  full_name: Grzybowski, Bartosz A.
  last_name: Grzybowski
citation:
  ama: Nakanishi H, Bishop KJM, Kowalczyk B, et al. Photoconductance and inverse photoconductance
    in films of functionalized metal nanoparticles. <i>Nature</i>. 2009;460(7253):371-375.
    doi:<a href="https://doi.org/10.1038/nature08131">10.1038/nature08131</a>
  apa: Nakanishi, H., Bishop, K. J. M., Kowalczyk, B., Nitzan, A., Weiss, E. A., Tretiakov,
    K. V., … Grzybowski, B. A. (2009). Photoconductance and inverse photoconductance
    in films of functionalized metal nanoparticles. <i>Nature</i>. Springer Nature.
    <a href="https://doi.org/10.1038/nature08131">https://doi.org/10.1038/nature08131</a>
  chicago: Nakanishi, Hideyuki, Kyle J. M. Bishop, Bartlomiej Kowalczyk, Abraham Nitzan,
    Emily A. Weiss, Konstantin V. Tretiakov, Mario M. Apodaca, Rafal Klajn, J. Fraser
    Stoddart, and Bartosz A. Grzybowski. “Photoconductance and Inverse Photoconductance
    in Films of Functionalized Metal Nanoparticles.” <i>Nature</i>. Springer Nature,
    2009. <a href="https://doi.org/10.1038/nature08131">https://doi.org/10.1038/nature08131</a>.
  ieee: H. Nakanishi <i>et al.</i>, “Photoconductance and inverse photoconductance
    in films of functionalized metal nanoparticles,” <i>Nature</i>, vol. 460, no.
    7253. Springer Nature, pp. 371–375, 2009.
  ista: Nakanishi H, Bishop KJM, Kowalczyk B, Nitzan A, Weiss EA, Tretiakov KV, Apodaca
    MM, Klajn R, Stoddart JF, Grzybowski BA. 2009. Photoconductance and inverse photoconductance
    in films of functionalized metal nanoparticles. Nature. 460(7253), 371–375.
  mla: Nakanishi, Hideyuki, et al. “Photoconductance and Inverse Photoconductance
    in Films of Functionalized Metal Nanoparticles.” <i>Nature</i>, vol. 460, no.
    7253, Springer Nature, 2009, pp. 371–75, doi:<a href="https://doi.org/10.1038/nature08131">10.1038/nature08131</a>.
  short: H. Nakanishi, K.J.M. Bishop, B. Kowalczyk, A. Nitzan, E.A. Weiss, K.V. Tretiakov,
    M.M. Apodaca, R. Klajn, J.F. Stoddart, B.A. Grzybowski, Nature 460 (2009) 371–375.
date_created: 2023-08-01T10:29:50Z
date_published: 2009-07-16T00:00:00Z
date_updated: 2023-08-08T09:00:59Z
day: '16'
doi: 10.1038/nature08131
extern: '1'
external_id:
  pmid:
  - '19606145'
intvolume: '       460'
issue: '7253'
keyword:
- Multidisciplinary
language:
- iso: eng
month: '07'
oa_version: None
page: 371-375
pmid: 1
publication: Nature
publication_identifier:
  eissn:
  - 1476-4687
  issn:
  - 0028-0836
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Photoconductance and inverse photoconductance in films of functionalized metal
  nanoparticles
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 460
year: '2009'
...
---
_id: '13419'
abstract:
- lang: eng
  text: Reaction-diffusion (RD) processes initiated from the surfaces of mesoscopic
    particles can fabricate complex core-and-shell structures. The propagation of
    a sharp RD front selectively removes metal colloids or nanoparticles from the
    supporting gel or polymer matrix. Once fabricated, the core structures can be
    processed “remotely” via galvanic replacement reactions, and the composite particles
    can be assembled into open-lattice crystals.
article_processing_charge: No
article_type: original
author:
- first_name: Paul J.
  full_name: Wesson, Paul J.
  last_name: Wesson
- first_name: Siowling
  full_name: Soh, Siowling
  last_name: Soh
- first_name: Rafal
  full_name: Klajn, Rafal
  id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
  last_name: Klajn
- first_name: Kyle J. M.
  full_name: Bishop, Kyle J. M.
  last_name: Bishop
- first_name: Timothy P.
  full_name: Gray, Timothy P.
  last_name: Gray
- first_name: Bartosz A.
  full_name: Grzybowski, Bartosz A.
  last_name: Grzybowski
citation:
  ama: 'Wesson PJ, Soh S, Klajn R, Bishop KJM, Gray TP, Grzybowski BA. “Remote” fabrication
    via three-dimensional reaction-diffusion: Making complex core-and-shell particles
    and assembling them into open-lattice crystals. <i>Advanced Materials</i>. 2009;21(19):1911-1915.
    doi:<a href="https://doi.org/10.1002/adma.200802964">10.1002/adma.200802964</a>'
  apa: 'Wesson, P. J., Soh, S., Klajn, R., Bishop, K. J. M., Gray, T. P., &#38; Grzybowski,
    B. A. (2009). “Remote” fabrication via three-dimensional reaction-diffusion: Making
    complex core-and-shell particles and assembling them into open-lattice crystals.
    <i>Advanced Materials</i>. Wiley. <a href="https://doi.org/10.1002/adma.200802964">https://doi.org/10.1002/adma.200802964</a>'
  chicago: 'Wesson, Paul J., Siowling Soh, Rafal Klajn, Kyle J. M. Bishop, Timothy
    P. Gray, and Bartosz A. Grzybowski. “‘Remote’ Fabrication via Three-Dimensional
    Reaction-Diffusion: Making Complex Core-and-Shell Particles and Assembling Them
    into Open-Lattice Crystals.” <i>Advanced Materials</i>. Wiley, 2009. <a href="https://doi.org/10.1002/adma.200802964">https://doi.org/10.1002/adma.200802964</a>.'
  ieee: 'P. J. Wesson, S. Soh, R. Klajn, K. J. M. Bishop, T. P. Gray, and B. A. Grzybowski,
    “‘Remote’ fabrication via three-dimensional reaction-diffusion: Making complex
    core-and-shell particles and assembling them into open-lattice crystals,” <i>Advanced
    Materials</i>, vol. 21, no. 19. Wiley, pp. 1911–1915, 2009.'
  ista: 'Wesson PJ, Soh S, Klajn R, Bishop KJM, Gray TP, Grzybowski BA. 2009. “Remote”
    fabrication via three-dimensional reaction-diffusion: Making complex core-and-shell
    particles and assembling them into open-lattice crystals. Advanced Materials.
    21(19), 1911–1915.'
  mla: 'Wesson, Paul J., et al. “‘Remote’ Fabrication via Three-Dimensional Reaction-Diffusion:
    Making Complex Core-and-Shell Particles and Assembling Them into Open-Lattice
    Crystals.” <i>Advanced Materials</i>, vol. 21, no. 19, Wiley, 2009, pp. 1911–15,
    doi:<a href="https://doi.org/10.1002/adma.200802964">10.1002/adma.200802964</a>.'
  short: P.J. Wesson, S. Soh, R. Klajn, K.J.M. Bishop, T.P. Gray, B.A. Grzybowski,
    Advanced Materials 21 (2009) 1911–1915.
date_created: 2023-08-01T10:30:04Z
date_published: 2009-05-18T00:00:00Z
date_updated: 2023-08-08T09:04:07Z
day: '18'
doi: 10.1002/adma.200802964
extern: '1'
intvolume: '        21'
issue: '19'
keyword:
- Mechanical Engineering
- Mechanics of Materials
- General Materials Science
language:
- iso: eng
month: '05'
oa_version: None
page: 1911-1915
publication: Advanced Materials
publication_identifier:
  eissn:
  - 1521-4095
  issn:
  - 0935-9648
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: '“Remote” fabrication via three-dimensional reaction-diffusion: Making complex
  core-and-shell particles and assembling them into open-lattice crystals'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 21
year: '2009'
...
---
_id: '13420'
abstract:
- lang: eng
  text: Weakly protected metal nanoparticles (MNPs) are used as precursors for the
    preparation of catenane- and pseudorotaxane-decorated NPs of various compositions
    (gold, palladium, platinum). When attached to the surface of MNPs, the molecular
    switches retain their switching abilities. The redox potentials of these switches
    depend on and can be regulated by the composition of the mixed self-assembled
    monolayers covering the MNPs.
article_processing_charge: No
article_type: original
author:
- first_name: Rafal
  full_name: Klajn, Rafal
  id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
  last_name: Klajn
- first_name: Lei
  full_name: Fang, Lei
  last_name: Fang
- first_name: Ali
  full_name: Coskun, Ali
  last_name: Coskun
- first_name: Mark A.
  full_name: Olson, Mark A.
  last_name: Olson
- first_name: Paul J.
  full_name: Wesson, Paul J.
  last_name: Wesson
- first_name: J. Fraser
  full_name: Stoddart, J. Fraser
  last_name: Stoddart
- first_name: Bartosz A.
  full_name: Grzybowski, Bartosz A.
  last_name: Grzybowski
citation:
  ama: Klajn R, Fang L, Coskun A, et al. Metal nanoparticles functionalized with molecular
    and supramolecular switches. <i>Journal of the American Chemical Society</i>.
    2009;131(12):4233-4235. doi:<a href="https://doi.org/10.1021/ja9001585">10.1021/ja9001585</a>
  apa: Klajn, R., Fang, L., Coskun, A., Olson, M. A., Wesson, P. J., Stoddart, J.
    F., &#38; Grzybowski, B. A. (2009). Metal nanoparticles functionalized with molecular
    and supramolecular switches. <i>Journal of the American Chemical Society</i>.
    American Chemical Society. <a href="https://doi.org/10.1021/ja9001585">https://doi.org/10.1021/ja9001585</a>
  chicago: Klajn, Rafal, Lei Fang, Ali Coskun, Mark A. Olson, Paul J. Wesson, J. Fraser
    Stoddart, and Bartosz A. Grzybowski. “Metal Nanoparticles Functionalized with
    Molecular and Supramolecular Switches.” <i>Journal of the American Chemical Society</i>.
    American Chemical Society, 2009. <a href="https://doi.org/10.1021/ja9001585">https://doi.org/10.1021/ja9001585</a>.
  ieee: R. Klajn <i>et al.</i>, “Metal nanoparticles functionalized with molecular
    and supramolecular switches,” <i>Journal of the American Chemical Society</i>,
    vol. 131, no. 12. American Chemical Society, pp. 4233–4235, 2009.
  ista: Klajn R, Fang L, Coskun A, Olson MA, Wesson PJ, Stoddart JF, Grzybowski BA.
    2009. Metal nanoparticles functionalized with molecular and supramolecular switches.
    Journal of the American Chemical Society. 131(12), 4233–4235.
  mla: Klajn, Rafal, et al. “Metal Nanoparticles Functionalized with Molecular and
    Supramolecular Switches.” <i>Journal of the American Chemical Society</i>, vol.
    131, no. 12, American Chemical Society, 2009, pp. 4233–35, doi:<a href="https://doi.org/10.1021/ja9001585">10.1021/ja9001585</a>.
  short: R. Klajn, L. Fang, A. Coskun, M.A. Olson, P.J. Wesson, J.F. Stoddart, B.A.
    Grzybowski, Journal of the American Chemical Society 131 (2009) 4233–4235.
date_created: 2023-08-01T10:30:17Z
date_published: 2009-04-01T00:00:00Z
date_updated: 2023-08-08T09:06:00Z
day: '01'
doi: 10.1021/ja9001585
extern: '1'
external_id:
  pmid:
  - '19265400'
intvolume: '       131'
issue: '12'
keyword:
- Colloid and Surface Chemistry
- Biochemistry
- General Chemistry
- Catalysis
language:
- iso: eng
month: '04'
oa_version: None
page: 4233-4235
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Metal nanoparticles functionalized with molecular and supramolecular switches
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 131
year: '2009'
...
---
_id: '13421'
abstract:
- lang: eng
  text: Side-chain poly[2]catenanes at the click of a switch! A bistable side-chain
    poly[2]catenane has been synthesized and found to form hierarchical self-assembled
    hollow superstructures of nanoscale dimensions in solution. Molecular electromechanical
    switching (see picture) of the material is demonstrated, and the ground-state
    equilibrium thermodynamics and switching kinetics are examined as the initial
    steps towards processible molecular-based electronic devices and nanoelectromechanical
    systems.
article_processing_charge: No
article_type: original
author:
- first_name: Mark A.
  full_name: Olson, Mark A.
  last_name: Olson
- first_name: Adam B.
  full_name: Braunschweig, Adam B.
  last_name: Braunschweig
- first_name: Lei
  full_name: Fang, Lei
  last_name: Fang
- first_name: Taichi
  full_name: Ikeda, Taichi
  last_name: Ikeda
- first_name: Rafal
  full_name: Klajn, Rafal
  id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
  last_name: Klajn
- first_name: Ali
  full_name: Trabolsi, Ali
  last_name: Trabolsi
- first_name: Paul J.
  full_name: Wesson, Paul J.
  last_name: Wesson
- first_name: Diego
  full_name: Benítez, Diego
  last_name: Benítez
- first_name: Chad A.
  full_name: Mirkin, Chad A.
  last_name: Mirkin
- first_name: Bartosz A.
  full_name: Grzybowski, Bartosz A.
  last_name: Grzybowski
- first_name: J. Fraser
  full_name: Stoddart, J. Fraser
  last_name: Stoddart
citation:
  ama: Olson MA, Braunschweig AB, Fang L, et al. A bistable poly[2]catenane forms
    nanosuperstructures. <i>Angewandte Chemie International Edition</i>. 2009;48(10):1792-1797.
    doi:<a href="https://doi.org/10.1002/anie.200804558">10.1002/anie.200804558</a>
  apa: Olson, M. A., Braunschweig, A. B., Fang, L., Ikeda, T., Klajn, R., Trabolsi,
    A., … Stoddart, J. F. (2009). A bistable poly[2]catenane forms nanosuperstructures.
    <i>Angewandte Chemie International Edition</i>. Wiley. <a href="https://doi.org/10.1002/anie.200804558">https://doi.org/10.1002/anie.200804558</a>
  chicago: Olson, Mark A., Adam B. Braunschweig, Lei Fang, Taichi Ikeda, Rafal Klajn,
    Ali Trabolsi, Paul J. Wesson, et al. “A Bistable Poly[2]Catenane Forms Nanosuperstructures.”
    <i>Angewandte Chemie International Edition</i>. Wiley, 2009. <a href="https://doi.org/10.1002/anie.200804558">https://doi.org/10.1002/anie.200804558</a>.
  ieee: M. A. Olson <i>et al.</i>, “A bistable poly[2]catenane forms nanosuperstructures,”
    <i>Angewandte Chemie International Edition</i>, vol. 48, no. 10. Wiley, pp. 1792–1797,
    2009.
  ista: Olson MA, Braunschweig AB, Fang L, Ikeda T, Klajn R, Trabolsi A, Wesson PJ,
    Benítez D, Mirkin CA, Grzybowski BA, Stoddart JF. 2009. A bistable poly[2]catenane
    forms nanosuperstructures. Angewandte Chemie International Edition. 48(10), 1792–1797.
  mla: Olson, Mark A., et al. “A Bistable Poly[2]Catenane Forms Nanosuperstructures.”
    <i>Angewandte Chemie International Edition</i>, vol. 48, no. 10, Wiley, 2009,
    pp. 1792–97, doi:<a href="https://doi.org/10.1002/anie.200804558">10.1002/anie.200804558</a>.
  short: M.A. Olson, A.B. Braunschweig, L. Fang, T. Ikeda, R. Klajn, A. Trabolsi,
    P.J. Wesson, D. Benítez, C.A. Mirkin, B.A. Grzybowski, J.F. Stoddart, Angewandte
    Chemie International Edition 48 (2009) 1792–1797.
date_created: 2023-08-01T10:30:30Z
date_published: 2009-02-23T00:00:00Z
date_updated: 2023-08-08T11:12:29Z
day: '23'
doi: 10.1002/anie.200804558
extern: '1'
external_id:
  pmid:
  - '19180620'
intvolume: '        48'
issue: '10'
keyword:
- General Chemistry
- Catalysis
language:
- iso: eng
month: '02'
oa_version: None
page: 1792-1797
pmid: 1
publication: Angewandte Chemie International Edition
publication_identifier:
  eissn:
  - 1521-3773
  issn:
  - 1433-7851
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: A bistable poly[2]catenane forms nanosuperstructures
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 48
year: '2009'
...
---
_id: '164'
abstract:
- lang: eng
  text: Let g be a cubic polynomial with integer coefficients and n&gt;9 variables,
    and assume that the congruence g=0 modulo p^k is soluble for all prime powers
    p^k. We show that the equation g=0 has infinitely many integer solutions when
    the cubic part of g defines a projective hypersurface with singular locus of dimension
    &lt;n-10. The proof is based on the Hardy-Littlewood circle method.
article_processing_charge: No
arxiv: 1
author:
- first_name: Timothy D
  full_name: Browning, Timothy D
  id: 35827D50-F248-11E8-B48F-1D18A9856A87
  last_name: Browning
  orcid: 0000-0002-8314-0177
- first_name: Roger
  full_name: Heath Brown, Roger
  last_name: Heath Brown
citation:
  ama: 'Browning TD, Heath Brown R. Integral points on cubic hypersurfaces. In: <i>Analytic
    Number Theory: Essays in Honour of Klaus Roth</i>. Cambridge University Press;
    2009:75-90.'
  apa: 'Browning, T. D., &#38; Heath Brown, R. (2009). Integral points on cubic hypersurfaces.
    In <i>Analytic Number Theory: Essays in honour of Klaus Roth</i> (pp. 75–90).
    Cambridge University Press.'
  chicago: 'Browning, Timothy D, and Roger Heath Brown. “Integral Points on Cubic
    Hypersurfaces.” In <i>Analytic Number Theory: Essays in Honour of Klaus Roth</i>,
    75–90. Cambridge University Press, 2009.'
  ieee: 'T. D. Browning and R. Heath Brown, “Integral points on cubic hypersurfaces,”
    in <i>Analytic Number Theory: Essays in honour of Klaus Roth</i>, Cambridge University
    Press, 2009, pp. 75–90.'
  ista: 'Browning TD, Heath Brown R. 2009.Integral points on cubic hypersurfaces.
    In: Analytic Number Theory: Essays in honour of Klaus Roth. , 75–90.'
  mla: 'Browning, Timothy D., and Roger Heath Brown. “Integral Points on Cubic Hypersurfaces.”
    <i>Analytic Number Theory: Essays in Honour of Klaus Roth</i>, Cambridge University
    Press, 2009, pp. 75–90.'
  short: 'T.D. Browning, R. Heath Brown, in:, Analytic Number Theory: Essays in Honour
    of Klaus Roth, Cambridge University Press, 2009, pp. 75–90.'
date_created: 2018-12-11T11:44:58Z
date_published: 2009-01-31T00:00:00Z
date_updated: 2021-01-12T06:52:11Z
day: '31'
extern: '1'
external_id:
  arxiv:
  - '0611086'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/math/0611086
month: '01'
oa: 1
oa_version: Preprint
page: 75 - 90
publication: 'Analytic Number Theory: Essays in honour of Klaus Roth'
publication_status: published
publisher: Cambridge University Press
publist_id: '7757'
quality_controlled: '1'
status: public
title: Integral points on cubic hypersurfaces
type: book_chapter
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2009'
...
---
_id: '165'
abstract:
- lang: eng
  text: We survey the state of affairs for the distribution of ℚ-rational points on
    non-singular del Pezzo surfaces of low degree, highlighting the recent resolution
    of Manin's conjecture for a non-singular del Pezzo surface of degree 4 by la Bretèche
    and Browning.
acknowledgement: Proceedings of the 5th China-Japan Seminar
alternative_title:
- Series on number theory and its application
author:
- first_name: Timothy D
  full_name: Timothy Browning
  id: 35827D50-F248-11E8-B48F-1D18A9856A87
  last_name: Browning
  orcid: 0000-0002-8314-0177
citation:
  ama: 'Browning TD. Resent progress on the quantitative arithmetic of del Pezzo surfaces.
    In: Aoki T, Kanemitsu S, Liu J, eds. Vol 6. World Scientific Publishing; 2009:1-18.
    doi:<a href="https://doi.org/10.1142/9789814289924_0001">https://doi.org/10.1142/9789814289924_0001</a>'
  apa: 'Browning, T. D. (2009). Resent progress on the quantitative arithmetic of
    del Pezzo surfaces. In T. Aoki, S. Kanemitsu, &#38; J. Liu (Eds.) (Vol. 6, pp.
    1–18). Presented at the Number Theory: Dreaming in dreams, World Scientific Publishing.
    <a href="https://doi.org/10.1142/9789814289924_0001">https://doi.org/10.1142/9789814289924_0001</a>'
  chicago: Browning, Timothy D. “Resent Progress on the Quantitative Arithmetic of
    Del Pezzo Surfaces.” edited by Takashi Aoki, Shigeru Kanemitsu, and Jianya Liu,
    6:1–18. World Scientific Publishing, 2009. <a href="https://doi.org/10.1142/9789814289924_0001">https://doi.org/10.1142/9789814289924_0001</a>.
  ieee: 'T. D. Browning, “Resent progress on the quantitative arithmetic of del Pezzo
    surfaces,” presented at the Number Theory: Dreaming in dreams, 2009, vol. 6, pp.
    1–18.'
  ista: 'Browning TD. 2009. Resent progress on the quantitative arithmetic of del
    Pezzo surfaces. Number Theory: Dreaming in dreams, Series on number theory and
    its application, vol. 6, 1–18.'
  mla: Browning, Timothy D. <i>Resent Progress on the Quantitative Arithmetic of Del
    Pezzo Surfaces</i>. Edited by Takashi Aoki et al., vol. 6, World Scientific Publishing,
    2009, pp. 1–18, doi:<a href="https://doi.org/10.1142/9789814289924_0001">https://doi.org/10.1142/9789814289924_0001</a>.
  short: T.D. Browning, in:, T. Aoki, S. Kanemitsu, J. Liu (Eds.), World Scientific
    Publishing, 2009, pp. 1–18.
conference:
  name: 'Number Theory: Dreaming in dreams'
date_created: 2018-12-11T11:44:58Z
date_published: 2009-08-24T00:00:00Z
date_updated: 2021-01-12T06:52:15Z
day: '24'
doi: https://doi.org/10.1142/9789814289924_0001
editor:
- first_name: Takashi
  full_name: Aoki, Takashi
  last_name: Aoki
- first_name: Shigeru
  full_name: Kanemitsu, Shigeru
  last_name: Kanemitsu
- first_name: Jianya
  full_name: Liu, Jianya
  last_name: Liu
extern: 1
intvolume: '         6'
month: '08'
page: 1 - 18
publication_status: published
publisher: World Scientific Publishing
publist_id: '7756'
quality_controlled: 0
status: public
title: Resent progress on the quantitative arithmetic of del Pezzo surfaces
type: conference
volume: 6
year: '2009'
...
---
_id: '168'
abstract:
- lang: eng
  text: The arithmetic of ternary diagonal equation is considered for degree d &gt;1,
    with the outcome that the set of coefficients for which the equation admits a
    non-zero integer solution is shown to have density zero.
alternative_title:
- Contemporary Mathematics
author:
- first_name: Timothy D
  full_name: Timothy Browning
  id: 35827D50-F248-11E8-B48F-1D18A9856A87
  last_name: Browning
  orcid: 0000-0002-8314-0177
- first_name: Rainer
  full_name: Dietmann, Rainer
  last_name: Dietmann
citation:
  ama: 'Browning TD, Dietmann R. Solubility of Fermat equations. In: <i>Quadratic
    Forms - Algebra, Arithmetic and Geometry</i>. Vol 493. American Mathematical Society;
    2009:99-106. doi:<a href="http://dx.doi.org/10.1090/conm/493">http://dx.doi.org/10.1090/conm/493</a>'
  apa: Browning, T. D., &#38; Dietmann, R. (2009). Solubility of Fermat equations.
    In <i>Quadratic Forms - algebra, arithmetic and geometry</i> (Vol. 493, pp. 99–106).
    American Mathematical Society. <a href="http://dx.doi.org/10.1090/conm/493">http://dx.doi.org/10.1090/conm/493</a>
  chicago: Browning, Timothy D, and Rainer Dietmann. “Solubility of Fermat Equations.”
    In <i>Quadratic Forms - Algebra, Arithmetic and Geometry</i>, 493:99–106. American
    Mathematical Society, 2009. <a href="http://dx.doi.org/10.1090/conm/493">http://dx.doi.org/10.1090/conm/493</a>.
  ieee: T. D. Browning and R. Dietmann, “Solubility of Fermat equations,” in <i>Quadratic
    Forms - algebra, arithmetic and geometry</i>, vol. 493, American Mathematical
    Society, 2009, pp. 99–106.
  ista: 'Browning TD, Dietmann R. 2009.Solubility of Fermat equations. In: Quadratic
    Forms - algebra, arithmetic and geometry. Contemporary Mathematics, vol. 493,
    99–106.'
  mla: Browning, Timothy D., and Rainer Dietmann. “Solubility of Fermat Equations.”
    <i>Quadratic Forms - Algebra, Arithmetic and Geometry</i>, vol. 493, American
    Mathematical Society, 2009, pp. 99–106, doi:<a href="http://dx.doi.org/10.1090/conm/493">http://dx.doi.org/10.1090/conm/493</a>.
  short: T.D. Browning, R. Dietmann, in:, Quadratic Forms - Algebra, Arithmetic and
    Geometry, American Mathematical Society, 2009, pp. 99–106.
date_created: 2018-12-11T11:44:59Z
date_published: 2009-01-01T00:00:00Z
date_updated: 2021-01-12T06:52:29Z
day: '01'
doi: http://dx.doi.org/10.1090/conm/493
extern: 1
intvolume: '       493'
main_file_link:
- open_access: '0'
  url: https://arxiv.org/abs/0805.3354
month: '01'
page: 99 - 106
publication: Quadratic Forms - algebra, arithmetic and geometry
publication_status: published
publisher: American Mathematical Society
publist_id: '7753'
quality_controlled: 0
status: public
title: Solubility of Fermat equations
type: book_chapter
volume: 493
year: '2009'
...
---
_id: '1718'
abstract:
- lang: eng
  text: Morphogens act as graded positional cues to control cell fate specification
    in many developing tissues. This concept, in which a signaling gradient regulates
    differential gene expression in a concentration-dependent manner, has received
    considerable experimental support. Nevertheless, several recent studies have challenged
    the straightforward model of morphogen activity. In particular, the observation
    that pattern formation is a dynamic process has raised questions about the influence
    of time on morphogen activity. Here we propose that the spatiotemporal dynamics
    of the cellular response to a morphogen gradient depend on a combination of temporal
    alterations to the morphogen gradient itself, the dynamics of its signal transduction
    and downstream interactions between target genes.
acknowledgement: EK is supported by an EMBO LTF, AK by a FEBS fellowship, and JB by
  MRC (UK) and the Wellcome Trust
author:
- first_name: Eva
  full_name: Kutějová, Eva
  last_name: Kutějová
- first_name: James
  full_name: Briscoe, James
  last_name: Briscoe
- first_name: Anna
  full_name: Anna Kicheva
  id: 3959A2A0-F248-11E8-B48F-1D18A9856A87
  last_name: Kicheva
  orcid: 0000-0003-4509-4998
citation:
  ama: Kutějová E, Briscoe J, Kicheva A. Temporal dynamics of patterning by morphogen
    gradients. <i>Current Opinion in Genetics &#38; Development</i>. 2009;19(4):315-322.
    doi:<a href="https://doi.org/10.1016/j.gde.2009.05.004">10.1016/j.gde.2009.05.004</a>
  apa: Kutějová, E., Briscoe, J., &#38; Kicheva, A. (2009). Temporal dynamics of patterning
    by morphogen gradients. <i>Current Opinion in Genetics &#38; Development</i>.
    Elsevier. <a href="https://doi.org/10.1016/j.gde.2009.05.004">https://doi.org/10.1016/j.gde.2009.05.004</a>
  chicago: Kutějová, Eva, James Briscoe, and Anna Kicheva. “Temporal Dynamics of Patterning
    by Morphogen Gradients.” <i>Current Opinion in Genetics &#38; Development</i>.
    Elsevier, 2009. <a href="https://doi.org/10.1016/j.gde.2009.05.004">https://doi.org/10.1016/j.gde.2009.05.004</a>.
  ieee: E. Kutějová, J. Briscoe, and A. Kicheva, “Temporal dynamics of patterning
    by morphogen gradients,” <i>Current Opinion in Genetics &#38; Development</i>,
    vol. 19, no. 4. Elsevier, pp. 315–322, 2009.
  ista: Kutějová E, Briscoe J, Kicheva A. 2009. Temporal dynamics of patterning by
    morphogen gradients. Current Opinion in Genetics &#38; Development. 19(4), 315–322.
  mla: Kutějová, Eva, et al. “Temporal Dynamics of Patterning by Morphogen Gradients.”
    <i>Current Opinion in Genetics &#38; Development</i>, vol. 19, no. 4, Elsevier,
    2009, pp. 315–22, doi:<a href="https://doi.org/10.1016/j.gde.2009.05.004">10.1016/j.gde.2009.05.004</a>.
  short: E. Kutějová, J. Briscoe, A. Kicheva, Current Opinion in Genetics &#38; Development
    19 (2009) 315–322.
date_created: 2018-12-11T11:53:38Z
date_published: 2009-08-01T00:00:00Z
date_updated: 2021-01-12T06:52:44Z
day: '01'
doi: 10.1016/j.gde.2009.05.004
extern: 1
intvolume: '        19'
issue: '4'
month: '08'
page: 315 - 322
publication: Current Opinion in Genetics & Development
publication_status: published
publisher: Elsevier
publist_id: '5410'
quality_controlled: 0
status: public
title: Temporal dynamics of patterning by morphogen gradients
type: journal_article
volume: 19
year: '2009'
...
---
_id: '1720'
abstract:
- lang: eng
  text: How morphogen gradients are formed in target tissues is a key question for
    understanding the mechanisms of morphological patterning. Here, we review different
    mechanisms of morphogen gradient formation from theoretical and experimental points
    of view. First, a simple, comprehensive overview of the underlying biophysical
    principles of several mechanisms of gradient formation is provided. We then discuss
    the advantages and limitations of different experimental approaches to gradient
    formation analysis.
author:
- first_name: Ortrud
  full_name: Wartlick, Ortrud
  last_name: Wartlick
- first_name: Anna
  full_name: Anna Kicheva
  id: 3959A2A0-F248-11E8-B48F-1D18A9856A87
  last_name: Kicheva
  orcid: 0000-0003-4509-4998
- first_name: Marcos
  full_name: González-Gaitán, Marcos A
  last_name: González Gaitán
citation:
  ama: Wartlick O, Kicheva A, González Gaitán M. Morphogen gradient formation . <i>Cold
    Spring Harbor perspectives in biology</i>. 2009;1(3). doi:<a href="https://doi.org/10.1101/cshperspect.a001255">10.1101/cshperspect.a001255</a>
  apa: Wartlick, O., Kicheva, A., &#38; González Gaitán, M. (2009). Morphogen gradient
    formation . <i>Cold Spring Harbor Perspectives in Biology</i>. Cold Spring Harbor
    Laboratory Press. <a href="https://doi.org/10.1101/cshperspect.a001255">https://doi.org/10.1101/cshperspect.a001255</a>
  chicago: Wartlick, Ortrud, Anna Kicheva, and Marcos González Gaitán. “Morphogen
    Gradient Formation .” <i>Cold Spring Harbor Perspectives in Biology</i>. Cold
    Spring Harbor Laboratory Press, 2009. <a href="https://doi.org/10.1101/cshperspect.a001255">https://doi.org/10.1101/cshperspect.a001255</a>.
  ieee: O. Wartlick, A. Kicheva, and M. González Gaitán, “Morphogen gradient formation
    ,” <i>Cold Spring Harbor perspectives in biology</i>, vol. 1, no. 3. Cold Spring
    Harbor Laboratory Press, 2009.
  ista: Wartlick O, Kicheva A, González Gaitán M. 2009. Morphogen gradient formation
    . Cold Spring Harbor perspectives in biology. 1(3).
  mla: Wartlick, Ortrud, et al. “Morphogen Gradient Formation .” <i>Cold Spring Harbor
    Perspectives in Biology</i>, vol. 1, no. 3, Cold Spring Harbor Laboratory Press,
    2009, doi:<a href="https://doi.org/10.1101/cshperspect.a001255">10.1101/cshperspect.a001255</a>.
  short: O. Wartlick, A. Kicheva, M. González Gaitán, Cold Spring Harbor Perspectives
    in Biology 1 (2009).
date_created: 2018-12-11T11:53:39Z
date_published: 2009-09-01T00:00:00Z
date_updated: 2021-01-12T06:52:45Z
day: '01'
doi: 10.1101/cshperspect.a001255
extern: 1
intvolume: '         1'
issue: '3'
month: '09'
publication: Cold Spring Harbor perspectives in biology
publication_status: published
publisher: Cold Spring Harbor Laboratory Press
publist_id: '5409'
quality_controlled: 0
status: public
title: 'Morphogen gradient formation '
type: journal_article
volume: 1
year: '2009'
...
---
OA_place: repository
OA_type: green
_id: '18726'
abstract:
- lang: eng
  text: The high sensitivity of JWST will open a new window on the end of the cosmological
    dark ages. Small stellar clusters, with a stellar mass of several × 106 M⊙, and
    low-mass black holes (BHs), with a mass of several $× 105 M⊙ should be directly
    detectable out to redshift z = 10, and individual supernovae (SNe) and gamma ray
    burst GRB afterglows are bright enough to be visible beyond this redshift. Dense
    primordial gas, in the process of collapsing from large scales to form protogalaxies,
    may also be possible to image through diffuse recombination line emission, possibly
    even before stars or BHs are formed. In this article, I discuss the key physical
    processes that are expected to have determined the sizes of the first star–clusters
    and black holes, and the prospect of studying these objects by direct detections
    with JWST and with other instruments. The direct light emitted by the very first
    stellar clusters and intermediate-mass black holes at z > 10 will likely fall
    below JWST’s detection threshold. However, JWST could reveal a decline at the
    faint-end of the high-redshift luminosity function, and thereby shed light on
    radiative and other feedback effects that operate at these early epochs. JWST
    will also have the sensitivity to detect individual SNe from beyond z = 10. In
    a dedicated survey lasting for several weeks, thousands of SNe could be detected
    at z > 6, with a redshift distribution extending to the formation of the very
    first stars at z ≳ 15. Using these SNe as tracers may be the only method to map
    out the earliest stages of the cosmic star–formation history. Finally, we point
    out that studying the earliest objects at high redshift will also offer a new
    window on the primordial power spectrum, on ∼100 times smaller scales than probed
    by current large-scale structure data.
alternative_title:
- Astrophysics and Space Science Proceedings
article_processing_charge: No
arxiv: 1
author:
- first_name: Zoltán
  full_name: Haiman, Zoltán
  id: 7c006e8c-cc0d-11ee-8322-cb904ef76f36
  last_name: Haiman
  orcid: 0000-0003-3633-5403
citation:
  ama: 'Haiman Z. Observing the first stars and black holes. In: <i>Astrophysics and
    Space Science Proceedings</i>. Dordrecht: Springer Nature; 2009:385-418. doi:<a
    href="https://doi.org/10.1007/978-1-4020-9457-6_15">10.1007/978-1-4020-9457-6_15</a>'
  apa: 'Haiman, Z. (2009). Observing the first stars and black holes. In <i>Astrophysics
    and Space Science Proceedings</i> (pp. 385–418). Dordrecht: Springer Nature. <a
    href="https://doi.org/10.1007/978-1-4020-9457-6_15">https://doi.org/10.1007/978-1-4020-9457-6_15</a>'
  chicago: 'Haiman, Zoltán. “Observing the First Stars and Black Holes.” In <i>Astrophysics
    and Space Science Proceedings</i>, 385–418. Dordrecht: Springer Nature, 2009.
    <a href="https://doi.org/10.1007/978-1-4020-9457-6_15">https://doi.org/10.1007/978-1-4020-9457-6_15</a>.'
  ieee: Z. Haiman, “Observing the first stars and black holes,” in <i>Astrophysics
    and Space Science Proceedings</i>, 2009, pp. 385–418.
  ista: Haiman Z. 2009. Observing the first stars and black holes. Astrophysics and
    Space Science Proceedings. , Astrophysics and Space Science Proceedings, , 385–418.
  mla: Haiman, Zoltán. “Observing the First Stars and Black Holes.” <i>Astrophysics
    and Space Science Proceedings</i>, Springer Nature, 2009, pp. 385–418, doi:<a
    href="https://doi.org/10.1007/978-1-4020-9457-6_15">10.1007/978-1-4020-9457-6_15</a>.
  short: Z. Haiman, in:, Astrophysics and Space Science Proceedings, Springer Nature,
    Dordrecht, 2009, pp. 385–418.
date_created: 2025-01-03T12:09:18Z
date_published: 2009-01-01T00:00:00Z
date_updated: 2025-01-03T12:14:49Z
day: '01'
doi: 10.1007/978-1-4020-9457-6_15
extern: '1'
external_id:
  arxiv:
  - '0809.3926'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/0809.3926
month: '01'
oa: 1
oa_version: Preprint
page: 385-418
place: Dordrecht
publication: Astrophysics and Space Science Proceedings
publication_identifier:
  eisbn:
  - '9781402094576'
  eissn:
  - 1570-6605
  isbn:
  - '9781402094569'
  issn:
  - 1570-6591
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Observing the first stars and black holes
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2009'
...
---
OA_place: repository
OA_type: green
_id: '18735'
abstract:
- lang: eng
  text: The high sensitivity of JWST will open a new window on the end of the cosmological
    dark ages. Small stellar clusters, with a stellar mass of several × 106 M⊙, and
    low-mass black holes (BHs), with a mass of several $× 105 M⊙ should be directly
    detectable out to redshift z = 10, and individual supernovae (SNe) and gamma ray
    burst GRB afterglows are bright enough to be visible beyond this redshift. Dense
    primordial gas, in the process of collapsing from large scales to form protogalaxies,
    may also be possible to image through diffuse recombination line emission, possibly
    even before stars or BHs are formed. In this article, I discuss the key physical
    processes that are expected to have determined the sizes of the first star–clusters
    and black holes, and the prospect of studying these objects by direct detections
    with JWST and with other instruments. The direct light emitted by the very first
    stellar clusters and intermediate-mass black holes at z > 10 will likely fall
    below JWST’s detection threshold. However, JWST could reveal a decline at the
    faint-end of the high-redshift luminosity function, and thereby shed light on
    radiative and other feedback effects that operate at these early epochs. JWST
    will also have the sensitivity to detect individual SNe from beyond z = 10. In
    a dedicated survey lasting for several weeks, thousands of SNe could be detected
    at z > 6, with a redshift distribution extending to the formation of the very
    first stars at z ≳ 15. Using these SNe as tracers may be the only method to map
    out the earliest stages of the cosmic star–formation history. Finally, we point
    out that studying the earliest objects at high redshift will also offer a new
    window on the primordial power spectrum, on ∼100 times smaller scales than probed
    by current large-scale structure data.
alternative_title:
- Astrophysics and Space Science Proceedings
article_processing_charge: No
arxiv: 1
author:
- first_name: Zoltán
  full_name: Haiman, Zoltán
  id: 7c006e8c-cc0d-11ee-8322-cb904ef76f36
  last_name: Haiman
  orcid: 0000-0003-3633-5403
citation:
  ama: 'Haiman Z. Observing the First Stars and Black Holes. In: Thronson HA, Stiavelli
    M, Tielens A, eds. <i>Astrophysics in the Next Decade</i>. Springer Nature; 2009:385-418.
    doi:<a href="https://doi.org/10.1007/978-1-4020-9457-6_15">10.1007/978-1-4020-9457-6_15</a>'
  apa: Haiman, Z. (2009). Observing the First Stars and Black Holes. In H. A. Thronson,
    M. Stiavelli, &#38; A. Tielens (Eds.), <i>Astrophysics in the Next Decade</i>
    (pp. 385–418). Springer Nature. <a href="https://doi.org/10.1007/978-1-4020-9457-6_15">https://doi.org/10.1007/978-1-4020-9457-6_15</a>
  chicago: Haiman, Zoltán. “Observing the First Stars and Black Holes.” In <i>Astrophysics
    in the Next Decade</i>, edited by Harley A. Thronson, Massimo Stiavelli, and Alexander
    Tielens, 385–418. Springer Nature, 2009. <a href="https://doi.org/10.1007/978-1-4020-9457-6_15">https://doi.org/10.1007/978-1-4020-9457-6_15</a>.
  ieee: Z. Haiman, “Observing the First Stars and Black Holes,” in <i>Astrophysics
    in the Next Decade</i>, H. A. Thronson, M. Stiavelli, and A. Tielens, Eds. Springer
    Nature, 2009, pp. 385–418.
  ista: 'Haiman Z. 2009.Observing the First Stars and Black Holes. In: Astrophysics
    in the Next Decade. Astrophysics and Space Science Proceedings, , 385–418.'
  mla: Haiman, Zoltán. “Observing the First Stars and Black Holes.” <i>Astrophysics
    in the Next Decade</i>, edited by Harley A. Thronson et al., Springer Nature,
    2009, pp. 385–418, doi:<a href="https://doi.org/10.1007/978-1-4020-9457-6_15">10.1007/978-1-4020-9457-6_15</a>.
  short: Z. Haiman, in:, H.A. Thronson, M. Stiavelli, A. Tielens (Eds.), Astrophysics
    in the Next Decade, Springer Nature, 2009, pp. 385–418.
date_created: 2025-01-03T12:29:16Z
date_published: 2009-02-11T00:00:00Z
date_updated: 2025-01-07T12:52:13Z
day: '11'
doi: 10.1007/978-1-4020-9457-6_15
editor:
- first_name: Harley A.
  full_name: Thronson, Harley A.
  last_name: Thronson
- first_name: Massimo
  full_name: Stiavelli, Massimo
  last_name: Stiavelli
- first_name: Alexander
  full_name: Tielens, Alexander
  last_name: Tielens
extern: '1'
external_id:
  arxiv:
  - '0809.3926'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/0809.3926
month: '02'
oa: 1
oa_version: Preprint
page: 385-418
publication: Astrophysics in the Next Decade
publication_identifier:
  eisbn:
  - '9781402094576'
  eissn:
  - 1570-6605
  isbn:
  - '9781402094569'
  issn:
  - 1570-6591
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Observing the First Stars and Black Holes
type: book_chapter
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2009'
...
---
_id: '1971'
abstract:
- lang: eng
  text: Complex I plays a central role in cellular energy production, coupling electron
    transfer between NADH and quinone to proton translocation. The mechanism of this
    highly efficient enzyme is currently unknown. Mitochondrial complex I is a major
    source of reactive oxygen species, which may be one of the causes of aging. Dysfunction
    of complex I is implicated in many human neurodegenerative diseases. We have determined
    several x-ray structures of the oxidized and reduced hydrophilic domain of complex
    I from Thermus thermophilus at up to 3.1 Å resolution. The structures reveal the
    mode of interaction of complex I with NADH, explaining known kinetic data and
    providing implications for the mechanism of reactive oxygen species production
    at the flavin site of complex I. Bound metals were identified in the channel at
    the interface with the frataxin-like subunit Nqo15, indicating possible iron-binding
    sites. Conformational changes upon reduction of the complex involve adjustments
    in the nucleotide-binding pocket, as well as small but significant shifts of several
    α-helices at the interface with the membrane domain. These shifts are likely to
    be driven by the reduction of nearby iron-sulfur clusters N2 and N6a/b. Cluster
    N2 is the electron donor to quinone and is coordinated by unique motif involving
    two consecutive (tandem) cysteines. An unprecedented &quot;on/off switch&quot;
    (disconnection) of coordinating bonds between the tandem cysteines and this cluster
    was observed upon reduction. Comparison of the structures suggests a novel mechanism
    of coupling between electron transfer and proton translocation, combining conformational
    changes and protonation/deprotonation of tandem cysteines.
acknowledgement: 'This work was supported by the Medical Research Council. '
author:
- first_name: John
  full_name: Berrisford, John M
  last_name: Berrisford
- first_name: Leonid A
  full_name: Leonid Sazanov
  id: 338D39FE-F248-11E8-B48F-1D18A9856A87
  last_name: Sazanov
  orcid: 0000-0002-0977-7989
citation:
  ama: Berrisford J, Sazanov LA. Structural basis for the mechanism of respiratory
    complex I. <i>Journal of Biological Chemistry</i>. 2009;284(43):29773-29783. doi:<a
    href="https://doi.org/10.1074/jbc.M109.032144">10.1074/jbc.M109.032144</a>
  apa: Berrisford, J., &#38; Sazanov, L. A. (2009). Structural basis for the mechanism
    of respiratory complex I. <i>Journal of Biological Chemistry</i>. American Society
    for Biochemistry and Molecular Biology. <a href="https://doi.org/10.1074/jbc.M109.032144">https://doi.org/10.1074/jbc.M109.032144</a>
  chicago: Berrisford, John, and Leonid A Sazanov. “Structural Basis for the Mechanism
    of Respiratory Complex I.” <i>Journal of Biological Chemistry</i>. American Society
    for Biochemistry and Molecular Biology, 2009. <a href="https://doi.org/10.1074/jbc.M109.032144">https://doi.org/10.1074/jbc.M109.032144</a>.
  ieee: J. Berrisford and L. A. Sazanov, “Structural basis for the mechanism of respiratory
    complex I,” <i>Journal of Biological Chemistry</i>, vol. 284, no. 43. American
    Society for Biochemistry and Molecular Biology, pp. 29773–29783, 2009.
  ista: Berrisford J, Sazanov LA. 2009. Structural basis for the mechanism of respiratory
    complex I. Journal of Biological Chemistry. 284(43), 29773–29783.
  mla: Berrisford, John, and Leonid A. Sazanov. “Structural Basis for the Mechanism
    of Respiratory Complex I.” <i>Journal of Biological Chemistry</i>, vol. 284, no.
    43, American Society for Biochemistry and Molecular Biology, 2009, pp. 29773–83,
    doi:<a href="https://doi.org/10.1074/jbc.M109.032144">10.1074/jbc.M109.032144</a>.
  short: J. Berrisford, L.A. Sazanov, Journal of Biological Chemistry 284 (2009) 29773–29783.
date_created: 2018-12-11T11:54:59Z
date_published: 2009-10-23T00:00:00Z
date_updated: 2021-01-12T06:54:26Z
day: '23'
doi: 10.1074/jbc.M109.032144
extern: 1
intvolume: '       284'
issue: '43'
month: '10'
page: 29773 - 29783
publication: Journal of Biological Chemistry
publication_status: published
publisher: American Society for Biochemistry and Molecular Biology
publist_id: '5114'
quality_controlled: 0
status: public
title: Structural basis for the mechanism of respiratory complex I
type: journal_article
volume: 284
year: '2009'
...
---
_id: '4357'
abstract:
- lang: eng
  text: Parallel evolution is the acquisition of identical adaptive traits in independently
    evolving populations. Understanding whether the genetic changes underlying adaptation
    to a common selective environment are parallel within and between species is interesting
    because it sheds light on the degree of evolutionary constraints. If parallel
    evolution is perfect, then the implication is that forces such as functional constraints,
    epistasis, and pleiotropy play an important role in shaping the outcomes of adaptive
    evolution. In addition, population genetic theory predicts that the probability
    of parallel evolution will decline with an increase in the number of adaptive
    solutions-if a single adaptive solution exists, then parallel evolution will be
    observed among highly divergent species. For this reason, it is predicted that
    close relatives-which likely overlap more in the details of their adaptive solutions-will
    show more parallel evolution. By adapting three related bacteriophage species
    to a novel environment we find (1) a high rate of parallel genetic evolution at
    orthologous nucleotide and amino acid residues within species, (2) parallel beneficial
    mutations do not occur in a common order in which they fix or appear in an evolving
    population, (3) low rates of parallel evolution and convergent evolution between
    species, and (4) the probability of parallel and convergent evolution between
    species is strongly effected by divergence.
author:
- first_name: Jonathan P
  full_name: Jonathan Bollback
  id: 2C6FA9CC-F248-11E8-B48F-1D18A9856A87
  last_name: Bollback
  orcid: 0000-0002-4624-4612
- first_name: John
  full_name: Huelsenbeck, John P
  last_name: Huelsenbeck
citation:
  ama: Bollback JP, Huelsenbeck J. Parallel genetic evolution within and between bacteriophage
    species of varying degrees of divergence. <i>Genetics</i>. 2009;181(1):225-234.
    doi:<a href="https://doi.org/10.1534/genetics.107.085225">10.1534/genetics.107.085225</a>
  apa: Bollback, J. P., &#38; Huelsenbeck, J. (2009). Parallel genetic evolution within
    and between bacteriophage species of varying degrees of divergence. <i>Genetics</i>.
    Genetics Society of America. <a href="https://doi.org/10.1534/genetics.107.085225">https://doi.org/10.1534/genetics.107.085225</a>
  chicago: Bollback, Jonathan P, and John Huelsenbeck. “Parallel Genetic Evolution
    within and between Bacteriophage Species of Varying Degrees of Divergence.” <i>Genetics</i>.
    Genetics Society of America, 2009. <a href="https://doi.org/10.1534/genetics.107.085225">https://doi.org/10.1534/genetics.107.085225</a>.
  ieee: J. P. Bollback and J. Huelsenbeck, “Parallel genetic evolution within and
    between bacteriophage species of varying degrees of divergence,” <i>Genetics</i>,
    vol. 181, no. 1. Genetics Society of America, pp. 225–234, 2009.
  ista: Bollback JP, Huelsenbeck J. 2009. Parallel genetic evolution within and between
    bacteriophage species of varying degrees of divergence. Genetics. 181(1), 225–234.
  mla: Bollback, Jonathan P., and John Huelsenbeck. “Parallel Genetic Evolution within
    and between Bacteriophage Species of Varying Degrees of Divergence.” <i>Genetics</i>,
    vol. 181, no. 1, Genetics Society of America, 2009, pp. 225–34, doi:<a href="https://doi.org/10.1534/genetics.107.085225">10.1534/genetics.107.085225</a>.
  short: J.P. Bollback, J. Huelsenbeck, Genetics 181 (2009) 225–234.
date_created: 2018-12-11T12:08:26Z
date_published: 2009-01-01T00:00:00Z
date_updated: 2021-01-12T07:56:22Z
day: '01'
doi: 10.1534/genetics.107.085225
extern: 1
intvolume: '       181'
issue: '1'
month: '01'
page: 225 - 234
publication: Genetics
publication_status: published
publisher: Genetics Society of America
publist_id: '1101'
quality_controlled: 0
status: public
title: Parallel genetic evolution within and between bacteriophage species of varying
  degrees of divergence
type: journal_article
volume: 181
year: '2009'
...
---
_id: '4360'
abstract:
- lang: eng
  text: 'Motivated by applications in software verification, we explore automated
    reasoning about the non-disjoint combination of theories of infinitely many finite
    structures, where the theories share set variables and set operations. We prove
    a combination theorem and apply it to show the decidability of the satisfiability
    problem for a class of formulas obtained by applying propositional connectives
    to formulas belonging to: 1) Boolean Algebra with Presburger Arithmetic (with
    quantifiers over sets and integers), 2) weak monadic second-order logic over trees
    (with monadic second-order quantifiers), 3) two-variable logic with counting quantifiers
    (ranging over elements), 4) the Bernays-Schönfinkel-Ramsey class of first-order
    logic with equality (with ∃ * ∀ * quantifier prefix), and 5) the quantifier-free
    logic of multisets with cardinality constraints.'
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Thomas
  full_name: Wies, Thomas
  id: 447BFB88-F248-11E8-B48F-1D18A9856A87
  last_name: Wies
- first_name: Ruzica
  full_name: Piskac, Ruzica
  last_name: Piskac
- first_name: Viktor
  full_name: Kuncak, Viktor
  last_name: Kuncak
citation:
  ama: 'Wies T, Piskac R, Kuncak V. Combining theories with shared set operations.
    In: <i>7th International Symposium on Frontiers of Combining Systems</i>. Vol
    5749. Springer; 2009:366-382. doi:<a href="https://doi.org/10.1007/978-3-642-04222-5_23">10.1007/978-3-642-04222-5_23</a>'
  apa: 'Wies, T., Piskac, R., &#38; Kuncak, V. (2009). Combining theories with shared
    set operations. In <i>7th International Symposium on Frontiers of Combining Systems</i>
    (Vol. 5749, pp. 366–382). Trento, Italy: Springer. <a href="https://doi.org/10.1007/978-3-642-04222-5_23">https://doi.org/10.1007/978-3-642-04222-5_23</a>'
  chicago: Wies, Thomas, Ruzica Piskac, and Viktor Kuncak. “Combining Theories with
    Shared Set Operations.” In <i>7th International Symposium on Frontiers of Combining
    Systems</i>, 5749:366–82. Springer, 2009. <a href="https://doi.org/10.1007/978-3-642-04222-5_23">https://doi.org/10.1007/978-3-642-04222-5_23</a>.
  ieee: T. Wies, R. Piskac, and V. Kuncak, “Combining theories with shared set operations,”
    in <i>7th International Symposium on Frontiers of Combining Systems</i>, Trento,
    Italy, 2009, vol. 5749, pp. 366–382.
  ista: 'Wies T, Piskac R, Kuncak V. 2009. Combining theories with shared set operations.
    7th International Symposium on Frontiers of Combining Systems. FroCoS: Frontiers
    of Combining Systems, LNCS, vol. 5749, 366–382.'
  mla: Wies, Thomas, et al. “Combining Theories with Shared Set Operations.” <i>7th
    International Symposium on Frontiers of Combining Systems</i>, vol. 5749, Springer,
    2009, pp. 366–82, doi:<a href="https://doi.org/10.1007/978-3-642-04222-5_23">10.1007/978-3-642-04222-5_23</a>.
  short: T. Wies, R. Piskac, V. Kuncak, in:, 7th International Symposium on Frontiers
    of Combining Systems, Springer, 2009, pp. 366–382.
conference:
  end_date: 2009-09-18
  location: Trento, Italy
  name: 'FroCoS: Frontiers of Combining Systems'
  start_date: 2009-09-16
date_created: 2018-12-11T12:08:27Z
date_published: 2009-01-01T00:00:00Z
date_updated: 2025-07-02T06:21:09Z
day: '01'
doi: 10.1007/978-3-642-04222-5_23
extern: '1'
intvolume: '      5749'
language:
- iso: eng
month: '01'
oa_version: None
page: 366 - 382
publication: 7th International Symposium on Frontiers of Combining Systems
publication_status: published
publisher: Springer
publist_id: '1098'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Combining theories with shared set operations
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 5749
year: '2009'
...
---
_id: '4363'
author:
- first_name: Vasu
  full_name: Vasu Singh
  id: 4DAE2708-F248-11E8-B48F-1D18A9856A87
  last_name: Singh
citation:
  ama: Singh V. Formalizing and Verifying Transactional Memories. <i>Formalizing and
    Verifying Transactional Memories</i>. 2009.
  apa: Singh, V. (2009). <i>Formalizing and Verifying Transactional Memories</i>.
    <i>Formalizing and Verifying Transactional Memories</i>. EPFL Lausanne.
  chicago: Singh, Vasu. “Formalizing and Verifying Transactional Memories.” <i>Formalizing
    and Verifying Transactional Memories</i>. EPFL Lausanne, 2009.
  ieee: V. Singh, “Formalizing and Verifying Transactional Memories,” EPFL Lausanne,
    2009.
  ista: Singh V. 2009. Formalizing and Verifying Transactional Memories. EPFL Lausanne.
  mla: Singh, Vasu. “Formalizing and Verifying Transactional Memories.” <i>Formalizing
    and Verifying Transactional Memories</i>, EPFL Lausanne, 2009.
  short: V. Singh, Formalizing and Verifying Transactional Memories, EPFL Lausanne,
    2009.
date_created: 2018-12-11T12:08:28Z
date_published: 2009-01-01T00:00:00Z
date_updated: 2021-01-12T07:56:25Z
day: '01'
extern: 1
month: '01'
publication: Formalizing and Verifying Transactional Memories
publication_status: published
publisher: EPFL Lausanne
publist_id: '1095'
quality_controlled: 0
status: public
title: Formalizing and Verifying Transactional Memories
type: dissertation
year: '2009'
...
---
_id: '4365'
abstract:
- lang: eng
  text: We present an abstraction refinement technique for the verification of universally
    quantified array assertions such as “all elements in the array are sorted”. Our
    technique can be seamlessly combined with existing software model checking algorithms.
    We implemented our technique in the ACSAR software model checker and successfully
    verified quantified array assertions for both text book examples and real-life
    examples taken from the Linux operating system kernel.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Mohamed
  full_name: Seghir, Mohamed
  last_name: Seghir
- first_name: Andreas
  full_name: Podelski, Andreas
  last_name: Podelski
- first_name: Thomas
  full_name: Wies, Thomas
  id: 447BFB88-F248-11E8-B48F-1D18A9856A87
  last_name: Wies
citation:
  ama: 'Seghir M, Podelski A, Wies T. Abstraction refinement for quantified array
    assertions. In: <i>16th International Symposium on Static Analysis</i>. Vol 5673.
    Springer; 2009:3-18. doi:<a href="https://doi.org/10.1007/978-3-642-03237-0_3">10.1007/978-3-642-03237-0_3</a>'
  apa: 'Seghir, M., Podelski, A., &#38; Wies, T. (2009). Abstraction refinement for
    quantified array assertions. In <i>16th International Symposium on Static Analysis</i>
    (Vol. 5673, pp. 3–18). Los Angeles, CA, United States: Springer. <a href="https://doi.org/10.1007/978-3-642-03237-0_3">https://doi.org/10.1007/978-3-642-03237-0_3</a>'
  chicago: Seghir, Mohamed, Andreas Podelski, and Thomas Wies. “Abstraction Refinement
    for Quantified Array Assertions.” In <i>16th International Symposium on Static
    Analysis</i>, 5673:3–18. Springer, 2009. <a href="https://doi.org/10.1007/978-3-642-03237-0_3">https://doi.org/10.1007/978-3-642-03237-0_3</a>.
  ieee: M. Seghir, A. Podelski, and T. Wies, “Abstraction refinement for quantified
    array assertions,” in <i>16th International Symposium on Static Analysis</i>,
    Los Angeles, CA, United States, 2009, vol. 5673, pp. 3–18.
  ista: 'Seghir M, Podelski A, Wies T. 2009. Abstraction refinement for quantified
    array assertions. 16th International Symposium on Static Analysis. SAS: Static
    Analysis Symposium, LNCS, vol. 5673, 3–18.'
  mla: Seghir, Mohamed, et al. “Abstraction Refinement for Quantified Array Assertions.”
    <i>16th International Symposium on Static Analysis</i>, vol. 5673, Springer, 2009,
    pp. 3–18, doi:<a href="https://doi.org/10.1007/978-3-642-03237-0_3">10.1007/978-3-642-03237-0_3</a>.
  short: M. Seghir, A. Podelski, T. Wies, in:, 16th International Symposium on Static
    Analysis, Springer, 2009, pp. 3–18.
conference:
  end_date: 2009-08-11
  location: Los Angeles, CA, United States
  name: 'SAS: Static Analysis Symposium'
  start_date: 2009-08-09
date_created: 2018-12-11T12:08:29Z
date_published: 2009-01-01T00:00:00Z
date_updated: 2025-07-02T06:45:01Z
day: '01'
doi: 10.1007/978-3-642-03237-0_3
extern: '1'
intvolume: '      5673'
language:
- iso: eng
month: '01'
oa_version: None
page: 3 - 18
publication: 16th International Symposium on Static Analysis
publication_status: published
publisher: Springer
publist_id: '1094'
status: public
title: Abstraction refinement for quantified array assertions
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 5673
year: '2009'
...
---
_id: '4375'
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Shuvendu
  full_name: Lahiri, Shuvendu
  last_name: Lahiri
- first_name: Shaz
  full_name: Qadeer, Shaz
  last_name: Qadeer
- first_name: Juan
  full_name: Galeotti, Juan
  last_name: Galeotti
- first_name: Jan
  full_name: Voung, Jan
  last_name: Voung
- first_name: Thomas
  full_name: Wies, Thomas
  id: 447BFB88-F248-11E8-B48F-1D18A9856A87
  last_name: Wies
citation:
  ama: 'Lahiri S, Qadeer S, Galeotti J, Voung J, Wies T. Intra-module inference. In:
    <i>21st International Conference on Computer Aided Verification</i>. Vol 5643.
    Springer; 2009:493-508. doi:<a href="https://doi.org/10.1007/978-3-642-02658-4_37">10.1007/978-3-642-02658-4_37</a>'
  apa: 'Lahiri, S., Qadeer, S., Galeotti, J., Voung, J., &#38; Wies, T. (2009). Intra-module
    inference. In <i>21st International Conference on Computer Aided Verification</i>
    (Vol. 5643, pp. 493–508). Grenoble, France: Springer. <a href="https://doi.org/10.1007/978-3-642-02658-4_37">https://doi.org/10.1007/978-3-642-02658-4_37</a>'
  chicago: Lahiri, Shuvendu, Shaz Qadeer, Juan Galeotti, Jan Voung, and Thomas Wies.
    “Intra-Module Inference.” In <i>21st International Conference on Computer Aided
    Verification</i>, 5643:493–508. Springer, 2009. <a href="https://doi.org/10.1007/978-3-642-02658-4_37">https://doi.org/10.1007/978-3-642-02658-4_37</a>.
  ieee: S. Lahiri, S. Qadeer, J. Galeotti, J. Voung, and T. Wies, “Intra-module inference,”
    in <i>21st International Conference on Computer Aided Verification</i>, Grenoble,
    France, 2009, vol. 5643, pp. 493–508.
  ista: 'Lahiri S, Qadeer S, Galeotti J, Voung J, Wies T. 2009. Intra-module inference.
    21st International Conference on Computer Aided Verification. CAV: Computer Aided
    Verification, LNCS, vol. 5643, 493–508.'
  mla: Lahiri, Shuvendu, et al. “Intra-Module Inference.” <i>21st International Conference
    on Computer Aided Verification</i>, vol. 5643, Springer, 2009, pp. 493–508, doi:<a
    href="https://doi.org/10.1007/978-3-642-02658-4_37">10.1007/978-3-642-02658-4_37</a>.
  short: S. Lahiri, S. Qadeer, J. Galeotti, J. Voung, T. Wies, in:, 21st International
    Conference on Computer Aided Verification, Springer, 2009, pp. 493–508.
conference:
  end_date: 2009-07-02
  location: Grenoble, France
  name: 'CAV: Computer Aided Verification'
  start_date: 2009-06-26
date_created: 2018-12-11T12:08:32Z
date_published: 2009-01-01T00:00:00Z
date_updated: 2025-07-02T06:41:41Z
day: '01'
doi: 10.1007/978-3-642-02658-4_37
extern: '1'
intvolume: '      5643'
language:
- iso: eng
month: '01'
oa_version: None
page: 493 - 508
publication: 21st International Conference on Computer Aided Verification
publication_identifier:
  eisbn:
  - 978-3-642-02658-4
publication_status: published
publisher: Springer
publist_id: '1082'
status: public
title: Intra-module inference
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 5643
year: '2009'
...
---
_id: '4376'
abstract:
- lang: eng
  text: "We present Chorus, a high-level parallel programming model suitable for irregular,
    heap-manipulating applications like mesh refinement and epidemic simulations,
    and JChorus, an implementation of the model on top of Java. One goal of Chorus
    is to express the dynamic and instance-dependent patterns of memory access that
    are common in typical irregular applications. Its other focus is locality of effects:
    the property that in many of the same applications, typical imperative commands
    only affect small, local regions in the shared heap.\r\nChorus addresses dynamism
    and locality through the unifying abstraction of an object assembly: a local region
    in a shared data structure equipped with a short-lived, speculative thread of
    control. The thread of control in an assembly can only access objects within the
    assembly. While objects can migrate from assembly to assembly, such migration
    is local--i.e., objects only move from one assembly to a neighboring one--and
    does not lead to aliasing. Programming primitives include a merge operation, by
    which an assembly merges with an adjacent assembly, and a split operation, which
    splits an assembly into smaller ones. Our abstractions are race and deadlock-free,
    and inherently data-centric.\r\nWe demonstrate that Chorus and JChorus allow natural
    programming of several important applications exhibiting irregular data-parallelism.
    We also present an implementation of JChorus based on a many-to-one mapping of
    assemblies to lower-level threads, and report on preliminary performance numbers."
article_processing_charge: No
author:
- first_name: Roberto
  full_name: Lublinerman, Roberto
  last_name: Lublinerman
- first_name: Swarat
  full_name: Chaudhuri, Swarat
  last_name: Chaudhuri
- first_name: Pavol
  full_name: Cerny, Pavol
  id: 4DCBEFFE-F248-11E8-B48F-1D18A9856A87
  last_name: Cerny
citation:
  ama: Lublinerman R, Chaudhuri S, Cerny P. Parallel programming with object assemblies.
    <i>ACM SIGPLAN Notices</i>. 2009;44(10):61-80. doi:<a href="https://doi.org/10.1145/1639949.164009">10.1145/1639949.164009</a>
  apa: Lublinerman, R., Chaudhuri, S., &#38; Cerny, P. (2009). Parallel programming
    with object assemblies. <i>ACM SIGPLAN Notices</i>. ACM. <a href="https://doi.org/10.1145/1639949.164009">https://doi.org/10.1145/1639949.164009</a>
  chicago: Lublinerman, Roberto, Swarat Chaudhuri, and Pavol Cerny. “Parallel Programming
    with Object Assemblies.” <i>ACM SIGPLAN Notices</i>. ACM, 2009. <a href="https://doi.org/10.1145/1639949.164009">https://doi.org/10.1145/1639949.164009</a>.
  ieee: R. Lublinerman, S. Chaudhuri, and P. Cerny, “Parallel programming with object
    assemblies,” <i>ACM SIGPLAN Notices</i>, vol. 44, no. 10. ACM, pp. 61–80, 2009.
  ista: Lublinerman R, Chaudhuri S, Cerny P. 2009. Parallel programming with object
    assemblies. ACM SIGPLAN Notices. 44(10), 61–80.
  mla: Lublinerman, Roberto, et al. “Parallel Programming with Object Assemblies.”
    <i>ACM SIGPLAN Notices</i>, vol. 44, no. 10, ACM, 2009, pp. 61–80, doi:<a href="https://doi.org/10.1145/1639949.164009">10.1145/1639949.164009</a>.
  short: R. Lublinerman, S. Chaudhuri, P. Cerny, ACM SIGPLAN Notices 44 (2009) 61–80.
date_created: 2018-12-11T12:08:32Z
date_published: 2009-10-25T00:00:00Z
date_updated: 2025-07-02T06:17:51Z
day: '25'
doi: 10.1145/1639949.164009
extern: '1'
intvolume: '        44'
issue: '10'
language:
- iso: eng
month: '10'
oa_version: None
page: 61 - 80
publication: ACM SIGPLAN Notices
publication_status: published
publisher: ACM
publist_id: '1083'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Parallel programming with object assemblies
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 44
year: '2009'
...