---
_id: '3399'
abstract:
- lang: eng
text: Context-dependent adjustment of mating tactics can drastically increase the
mating success of behaviourally flexible animals. We used the ant Cardiocondyla
obscurior as a model system to study adaptive adjustment of male mating tactics.
This species shows a male diphenism of wingless fighter males and peaceful winged
males. Whereas the wingless males stay and exclusively mate in the maternal colony,
the mating behaviour of winged males is plastic. They copulate with female sexuals
in their natal nests early in life but later disperse in search for sexuals outside.
In this study, we observed the nest-leaving behaviour of winged males under different
conditions and found that they adaptively adjust the timing of their dispersal
to the availability of mating partners, as well as the presence, and even the
type of competitors in their natal nests. In colonies with virgin female queens
winged males stayed longest when they were the only male in the nest. They left
earlier when mating partners were not available or when other males were present.
In the presence of wingless, locally mating fighter males, winged males dispersed
earlier than in the presence of docile, winged competitors. This suggests that
C. obscurior males are capable of estimating their local breeding chances and
adaptively adjust their dispersal behaviour in both an opportunistic and a risk-sensitive
way, thus showing hitherto unknown behavioural plasticity in social insect males.
acknowledgement: This work was supported by the German Science Foundation (www.dfg.de,
He 1623/23).
article_number: e17323
article_processing_charge: No
author:
- first_name: Sylvia
full_name: Cremer, Sylvia
id: 2F64EC8C-F248-11E8-B48F-1D18A9856A87
last_name: Cremer
orcid: 0000-0002-2193-3868
- first_name: Alexandra
full_name: Schrempf, Alexandra
last_name: Schrempf
- first_name: Jürgen
full_name: Heinze, Jürgen
last_name: Heinze
citation:
ama: Cremer S, Schrempf A, Heinze J. Competition and opportunity shape the reproductive
tactics of males in the ant Cardiocondyla obscurior. PLoS One. 2011;6(3).
doi:10.1371/journal.pone.0017323
apa: Cremer, S., Schrempf, A., & Heinze, J. (2011). Competition and opportunity
shape the reproductive tactics of males in the ant Cardiocondyla obscurior. PLoS
One. Public Library of Science. https://doi.org/10.1371/journal.pone.0017323
chicago: Cremer, Sylvia, Alexandra Schrempf, and Jürgen Heinze. “Competition and
Opportunity Shape the Reproductive Tactics of Males in the Ant Cardiocondyla Obscurior.”
PLoS One. Public Library of Science, 2011. https://doi.org/10.1371/journal.pone.0017323.
ieee: S. Cremer, A. Schrempf, and J. Heinze, “Competition and opportunity shape
the reproductive tactics of males in the ant Cardiocondyla obscurior,” PLoS
One, vol. 6, no. 3. Public Library of Science, 2011.
ista: Cremer S, Schrempf A, Heinze J. 2011. Competition and opportunity shape the
reproductive tactics of males in the ant Cardiocondyla obscurior. PLoS One. 6(3),
e17323.
mla: Cremer, Sylvia, et al. “Competition and Opportunity Shape the Reproductive
Tactics of Males in the Ant Cardiocondyla Obscurior.” PLoS One, vol. 6,
no. 3, e17323, Public Library of Science, 2011, doi:10.1371/journal.pone.0017323.
short: S. Cremer, A. Schrempf, J. Heinze, PLoS One 6 (2011).
corr_author: '1'
date_created: 2018-12-11T12:03:07Z
date_published: 2011-03-29T00:00:00Z
date_updated: 2025-09-30T08:40:50Z
day: '29'
ddc:
- '576'
department:
- _id: SyCr
doi: 10.1371/journal.pone.0017323
external_id:
isi:
- '000289054600009'
file:
- access_level: open_access
checksum: 46f8cbde61f06fcacf8fa297cacfa0e5
content_type: application/pdf
creator: system
date_created: 2018-12-12T10:15:40Z
date_updated: 2020-07-14T12:46:12Z
file_id: '5162'
file_name: IST-2015-377-v1+1_journal.pone.0017323.pdf
file_size: 147367
relation: main_file
file_date_updated: 2020-07-14T12:46:12Z
has_accepted_license: '1'
intvolume: ' 6'
isi: 1
issue: '3'
language:
- iso: eng
license: https://creativecommons.org/licenses/by/4.0/
month: '03'
oa: 1
oa_version: Published Version
publication: PLoS One
publication_status: published
publisher: Public Library of Science
publist_id: '3059'
pubrep_id: '377'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Competition and opportunity shape the reproductive tactics of males in the
ant Cardiocondyla obscurior
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 6
year: '2011'
...
---
_id: '3401'
abstract:
- lang: eng
text: The Bicoid morphogen gradient directs the patterning of cell fates along the
anterior-posterior axis of the syncytial Drosophila embryo and serves as a paradigm
of morphogen-mediated patterning. The simplest models of gradient formation rely
on constant protein synthesis and diffusion from anteriorly localized source mRNA,
coupled with uniform protein degradation. However, currently such models cannot
account for all known gradient characteristics. Recent work has proposed that
bicoid mRNA spatial distribution is sufficient to produce the observed protein
gradient, minimizing the role of protein transport. Here, we adapt a novel method
of fluorescent in situ hybridization to quantify the global spatio-temporal dynamics
of bicoid mRNA particles. We determine that >90% of all bicoid mRNA is continuously
present within the anterior 20% of the embryo. bicoid mRNA distribution along
the body axis remains nearly unchanged despite dynamic mRNA translocation from
the embryo core to the cortex. To evaluate the impact of mRNA distribution on
protein gradient dynamics, we provide detailed quantitative measurements of nuclear
Bicoid levels during the formation of the protein gradient. We find that gradient
establishment begins 45 minutes after fertilization and that the gradient requires
about 50 minutes to reach peak levels. In numerical simulations of gradient formation,
we find that incorporating the actual bicoid mRNA distribution yields a closer
prediction of the observed protein dynamics compared to modeling protein production
from a point source at the anterior pole. We conclude that the spatial distribution
of bicoid mRNA contributes to, but cannot account for, protein gradient formation,
and therefore that protein movement, either active or passive, is required for
gradient formation.
article_number: e1000596
article_type: original
author:
- first_name: Shawn
full_name: Little, Shawn
last_name: Little
- first_name: Gasper
full_name: Tkacik, Gasper
id: 3D494DCA-F248-11E8-B48F-1D18A9856A87
last_name: Tkacik
orcid: 0000-0002-6699-1455
- first_name: Thomas
full_name: Kneeland, Thomas
last_name: Kneeland
- first_name: Eric
full_name: Wieschaus, Eric
last_name: Wieschaus
- first_name: Thomas
full_name: Gregor, Thomas
last_name: Gregor
citation:
ama: Little S, Tkačik G, Kneeland T, Wieschaus E, Gregor T. The formation of the
Bicoid morphogen gradient requires protein movement from anteriorly localized
source. PLoS Biology. 2011;9(3). doi:10.1371/journal.pbio.1000596
apa: Little, S., Tkačik, G., Kneeland, T., Wieschaus, E., & Gregor, T. (2011).
The formation of the Bicoid morphogen gradient requires protein movement from
anteriorly localized source. PLoS Biology. Public Library of Science. https://doi.org/10.1371/journal.pbio.1000596
chicago: Little, Shawn, Gašper Tkačik, Thomas Kneeland, Eric Wieschaus, and Thomas
Gregor. “The Formation of the Bicoid Morphogen Gradient Requires Protein Movement
from Anteriorly Localized Source.” PLoS Biology. Public Library of Science,
2011. https://doi.org/10.1371/journal.pbio.1000596.
ieee: S. Little, G. Tkačik, T. Kneeland, E. Wieschaus, and T. Gregor, “The formation
of the Bicoid morphogen gradient requires protein movement from anteriorly localized
source,” PLoS Biology, vol. 9, no. 3. Public Library of Science, 2011.
ista: Little S, Tkačik G, Kneeland T, Wieschaus E, Gregor T. 2011. The formation
of the Bicoid morphogen gradient requires protein movement from anteriorly localized
source. PLoS Biology. 9(3), e1000596.
mla: Little, Shawn, et al. “The Formation of the Bicoid Morphogen Gradient Requires
Protein Movement from Anteriorly Localized Source.” PLoS Biology, vol.
9, no. 3, e1000596, Public Library of Science, 2011, doi:10.1371/journal.pbio.1000596.
short: S. Little, G. Tkačik, T. Kneeland, E. Wieschaus, T. Gregor, PLoS Biology
9 (2011).
date_created: 2018-12-11T12:03:08Z
date_published: 2011-03-01T00:00:00Z
date_updated: 2021-01-12T07:43:14Z
day: '01'
doi: 10.1371/journal.pbio.1000596
extern: '1'
intvolume: ' 9'
issue: '3'
language:
- iso: eng
month: '03'
oa_version: None
publication: PLoS Biology
publication_status: published
publisher: Public Library of Science
publist_id: '3057'
quality_controlled: '1'
status: public
title: The formation of the Bicoid morphogen gradient requires protein movement from
anteriorly localized source
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 9
year: '2011'
...
---
_id: '3405'
abstract:
- lang: eng
text: Glutamate is the major excitatory neurotransmitter in the mammalian central
nervous system and gates non-selective cation channels. The origins of glutamate
receptors are not well understood as they differ structurally and functionally
from simple bacterial ligand-gated ion channels. Here we report the discovery
of an ionotropic glutamate receptor that combines the typical eukaryotic domain
architecture with the 'TXVGYG' signature sequence of the selectivity filter found
in K+ channels. This receptor exhibits functional properties intermediate between
bacterial and eukaryotic glutamate-gated ion channels, suggesting a link in the
evolution of ionotropic glutamate receptors.
article_processing_charge: No
author:
- first_name: Harald L
full_name: Janovjak, Harald L
id: 33BA6C30-F248-11E8-B48F-1D18A9856A87
last_name: Janovjak
orcid: 0000-0002-8023-9315
- first_name: Guillaume
full_name: Sandoz, Guillaume
last_name: Sandoz
- first_name: Ehud
full_name: Isacoff, Ehud
last_name: Isacoff
citation:
ama: Janovjak HL, Sandoz G, Isacoff E. Modern ionotropic glutamate receptor with
a K+ selectivity signature sequence. Nature Communications. 2011;2(232):1-6.
doi:10.1038/ncomms1231
apa: Janovjak, H. L., Sandoz, G., & Isacoff, E. (2011). Modern ionotropic glutamate
receptor with a K+ selectivity signature sequence. Nature Communications.
Nature Publishing Group. https://doi.org/10.1038/ncomms1231
chicago: Janovjak, Harald L, Guillaume Sandoz, and Ehud Isacoff. “Modern Ionotropic
Glutamate Receptor with a K+ Selectivity Signature Sequence.” Nature Communications.
Nature Publishing Group, 2011. https://doi.org/10.1038/ncomms1231.
ieee: H. L. Janovjak, G. Sandoz, and E. Isacoff, “Modern ionotropic glutamate receptor
with a K+ selectivity signature sequence,” Nature Communications, vol.
2, no. 232. Nature Publishing Group, pp. 1–6, 2011.
ista: Janovjak HL, Sandoz G, Isacoff E. 2011. Modern ionotropic glutamate receptor
with a K+ selectivity signature sequence. Nature Communications. 2(232), 1–6.
mla: Janovjak, Harald L., et al. “Modern Ionotropic Glutamate Receptor with a K+
Selectivity Signature Sequence.” Nature Communications, vol. 2, no. 232,
Nature Publishing Group, 2011, pp. 1–6, doi:10.1038/ncomms1231.
short: H.L. Janovjak, G. Sandoz, E. Isacoff, Nature Communications 2 (2011) 1–6.
corr_author: '1'
date_created: 2018-12-11T12:03:09Z
date_published: 2011-03-08T00:00:00Z
date_updated: 2025-09-30T08:40:22Z
day: '08'
ddc:
- '570'
- '571'
department:
- _id: HaJa
doi: 10.1038/ncomms1231
external_id:
isi:
- '000289982600022'
file:
- access_level: open_access
checksum: 6b68d65aadd97c18d663eb117a0a9d35
content_type: application/pdf
creator: system
date_created: 2018-12-12T10:11:36Z
date_updated: 2020-07-14T12:46:12Z
file_id: '4891'
file_name: IST-2017-832-v1+1_janovjak.pdf
file_size: 387654
relation: main_file
file_date_updated: 2020-07-14T12:46:12Z
has_accepted_license: '1'
intvolume: ' 2'
isi: 1
issue: '232'
language:
- iso: eng
month: '03'
oa: 1
oa_version: Submitted Version
page: 1 - 6
publication: Nature Communications
publication_status: published
publisher: Nature Publishing Group
publist_id: '2997'
pubrep_id: '832'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Modern ionotropic glutamate receptor with a K+ selectivity signature sequence
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 2
year: '2011'
...
---
_id: '341'
abstract:
- lang: eng
text: An oriented attachment and growth mechanism allows an accurate control of
the size and morphology of Cu2-xS nanocrystals, from spheres and disks to tetradecahedrons
and dodecahedrons. The synthesis conditions and the growth mechanism are detailed
here.
acknowledgement: "This work was supported by the Spanish MICINN projects\r\nMAT2008-05779,
MAT2008-03400-E/MAT, ENE2008-03277-E/\r\nCON, MAT2010-15138, MAT-2010-21510, CDS2009-00050
and\r\nCSD2009-00013 and by Generalitat de Catalunya 2009-SGR-770\r\nand XaRMAE."
article_processing_charge: No
article_type: original
author:
- first_name: Wenhua
full_name: Li, Wenhua
last_name: Li
- first_name: Alexey
full_name: Shavel, Alexey
last_name: Shavel
- first_name: Roger
full_name: Guzman, Roger
last_name: Guzman
- first_name: Javier
full_name: Rubio Garcia, Javier
last_name: Rubio Garcia
- first_name: Cristina
full_name: Flox, Cristina
last_name: Flox
- first_name: Jiandong
full_name: Fan, Jiandong
last_name: Fan
- first_name: Doris
full_name: Cadavid, Doris
last_name: Cadavid
- first_name: Maria
full_name: Ibáñez, Maria
id: 43C61214-F248-11E8-B48F-1D18A9856A87
last_name: Ibáñez
orcid: 0000-0001-5013-2843
- first_name: Jordi
full_name: Arbiol, Jordi
last_name: Arbiol
- first_name: Joan
full_name: Morante, Joan
last_name: Morante
- first_name: Andreu
full_name: Cabot, Andreu
last_name: Cabot
citation:
ama: 'Li W, Shavel A, Guzman R, et al. Morphology evolution of Cu2−xS nanoparticles:
from spheres to dodecahedrons. Chemical Communications. 2011;47(37):10332-10334.
doi:10.1039/c1cc13803k'
apa: 'Li, W., Shavel, A., Guzman, R., Rubio Garcia, J., Flox, C., Fan, J., … Cabot,
A. (2011). Morphology evolution of Cu2−xS nanoparticles: from spheres to dodecahedrons.
Chemical Communications. Royal Society of Chemistry (RSC) . https://doi.org/10.1039/c1cc13803k'
chicago: 'Li, Wenhua, Alexey Shavel, Roger Guzman, Javier Rubio Garcia, Cristina
Flox, Jiandong Fan, Doris Cadavid, et al. “Morphology Evolution of Cu2−xS Nanoparticles:
From Spheres to Dodecahedrons.” Chemical Communications. Royal Society
of Chemistry (RSC) , 2011. https://doi.org/10.1039/c1cc13803k.'
ieee: 'W. Li et al., “Morphology evolution of Cu2−xS nanoparticles: from
spheres to dodecahedrons,” Chemical Communications, vol. 47, no. 37. Royal
Society of Chemistry (RSC) , pp. 10332–10334, 2011.'
ista: 'Li W, Shavel A, Guzman R, Rubio Garcia J, Flox C, Fan J, Cadavid D, Ibáñez
M, Arbiol J, Morante J, Cabot A. 2011. Morphology evolution of Cu2−xS nanoparticles:
from spheres to dodecahedrons. Chemical Communications. 47(37), 10332–10334.'
mla: 'Li, Wenhua, et al. “Morphology Evolution of Cu2−xS Nanoparticles: From Spheres
to Dodecahedrons.” Chemical Communications, vol. 47, no. 37, Royal Society
of Chemistry (RSC) , 2011, pp. 10332–34, doi:10.1039/c1cc13803k.'
short: W. Li, A. Shavel, R. Guzman, J. Rubio Garcia, C. Flox, J. Fan, D. Cadavid,
M. Ibáñez, J. Arbiol, J. Morante, A. Cabot, Chemical Communications 47 (2011)
10332–10334.
date_created: 2018-12-11T11:45:55Z
date_published: 2011-10-07T00:00:00Z
date_updated: 2021-01-12T07:43:17Z
day: '07'
doi: 10.1039/c1cc13803k
extern: '1'
intvolume: ' 47'
issue: '37'
language:
- iso: eng
month: '10'
oa_version: None
page: 10332 - 10334
publication: Chemical Communications
publication_status: published
publisher: 'Royal Society of Chemistry (RSC) '
publist_id: '7491'
quality_controlled: '1'
status: public
title: 'Morphology evolution of Cu2−xS nanoparticles: from spheres to dodecahedrons'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 47
year: '2011'
...
---
_id: '14305'
abstract:
- lang: eng
text: Understanding the mechanism of protein folding requires a detailed knowledge
of the structural properties of the barriers separating unfolded from native conformations.
The S-peptide from ribonuclease S forms its α-helical structure only upon binding
to the folded S-protein. We characterized the transition state for this binding-induced
folding reaction at high resolution by determining the effect of site-specific
backbone thioxylation and side-chain modifications on the kinetics and thermodynamics
of the reaction, which allows us to monitor formation of backbone hydrogen bonds
and side-chain interactions in the transition state. The experiments reveal that
α-helical structure in the S-peptide is absent in the transition state of binding.
Recognition between the unfolded S-peptide and the S-protein is mediated by loosely
packed hydrophobic side-chain interactions in two well defined regions on the
S-peptide. Close packing and helix formation occurs rapidly after binding. Introducing
hydrophobic residues at positions outside the recognition region can drastically
slow down association.
article_processing_charge: No
article_type: original
author:
- first_name: Annett
full_name: Bachmann, Annett
last_name: Bachmann
- first_name: Dirk
full_name: Wildemann, Dirk
last_name: Wildemann
- first_name: Florian M
full_name: Praetorius, Florian M
id: dfec9381-4341-11ee-8fd8-faa02bba7d62
last_name: Praetorius
- first_name: Gunter
full_name: Fischer, Gunter
last_name: Fischer
- first_name: Thomas
full_name: Kiefhaber, Thomas
last_name: Kiefhaber
citation:
ama: Bachmann A, Wildemann D, Praetorius FM, Fischer G, Kiefhaber T. Mapping backbone
and side-chain interactions in the transition state of a coupled protein folding
and binding reaction. PNAS. 2011;108(10):3952-3957. doi:10.1073/pnas.1012668108
apa: Bachmann, A., Wildemann, D., Praetorius, F. M., Fischer, G., & Kiefhaber,
T. (2011). Mapping backbone and side-chain interactions in the transition state
of a coupled protein folding and binding reaction. PNAS. Proceedings of
the National Academy of Sciences. https://doi.org/10.1073/pnas.1012668108
chicago: Bachmann, Annett, Dirk Wildemann, Florian M Praetorius, Gunter Fischer,
and Thomas Kiefhaber. “Mapping Backbone and Side-Chain Interactions in the Transition
State of a Coupled Protein Folding and Binding Reaction.” PNAS. Proceedings
of the National Academy of Sciences, 2011. https://doi.org/10.1073/pnas.1012668108.
ieee: A. Bachmann, D. Wildemann, F. M. Praetorius, G. Fischer, and T. Kiefhaber,
“Mapping backbone and side-chain interactions in the transition state of a coupled
protein folding and binding reaction,” PNAS, vol. 108, no. 10. Proceedings
of the National Academy of Sciences, pp. 3952–3957, 2011.
ista: Bachmann A, Wildemann D, Praetorius FM, Fischer G, Kiefhaber T. 2011. Mapping
backbone and side-chain interactions in the transition state of a coupled protein
folding and binding reaction. PNAS. 108(10), 3952–3957.
mla: Bachmann, Annett, et al. “Mapping Backbone and Side-Chain Interactions in the
Transition State of a Coupled Protein Folding and Binding Reaction.” PNAS,
vol. 108, no. 10, Proceedings of the National Academy of Sciences, 2011, pp. 3952–57,
doi:10.1073/pnas.1012668108.
short: A. Bachmann, D. Wildemann, F.M. Praetorius, G. Fischer, T. Kiefhaber, PNAS
108 (2011) 3952–3957.
date_created: 2023-09-06T12:54:36Z
date_published: 2011-01-12T00:00:00Z
date_updated: 2023-11-07T11:50:29Z
day: '12'
doi: 10.1073/pnas.1012668108
extern: '1'
external_id:
pmid:
- '21325613'
intvolume: ' 108'
issue: '10'
keyword:
- Multidisciplinary
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1073/pnas.1012668108
month: '01'
oa: 1
oa_version: Published Version
page: 3952-3957
pmid: 1
publication: PNAS
publication_identifier:
eissn:
- 1091-6490
issn:
- 0027-8424
publication_status: published
publisher: Proceedings of the National Academy of Sciences
quality_controlled: '1'
scopus_import: '1'
status: public
title: Mapping backbone and side-chain interactions in the transition state of a coupled
protein folding and binding reaction
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 108
year: '2011'
...
---
_id: '1467'
abstract:
- lang: eng
text: We propose a general conjecture for the mixed Hodge polynomial of the generic
character varieties of representations of the fundamental group of a Riemann surface
of genus g to GLn(C) with fixed generic semisimple conjugacy classes at k punctures.
This conjecture generalizes the Cauchy identity for Macdonald polynomials and
is a common generalization of two formulas that we prove in this paper. The first
is a formula for the E-polynomial of these character varieties which we obtain
using the character table of GLn(Fq). We use this formula to compute the Euler
characteristic of character varieties. The second formula gives the Poincaré polynomial
of certain associated quiver varieties which we obtain using the character table
of gln(Fq). In the last main result we prove that the Poincaré polynomials of
the quiver varieties equal certain multiplicities in the tensor product of irreducible
characters of GLn(Fq). As a consequence we find a curious connection between Kac-Moody
algebras associated with comet-shaped, and typically wild, quivers and the representation
theory of GLn(Fq).
acknowledgement: |-
Hausel’s work was supported by National Science Foundation grants DMS-0305505 and DMS-0604775, by an Alfred Sloan Fellowship, and by a Royal Society University Research Fellowship. Letellier’s work supported by Agence Nationale de la Recherche grant ANR-09-JCJC-0102-01.
Rodriguez-Villegas’s work supported by National Science Foundation grant DMS-0200605, by an FRA from the University of Texas at Austin, by EPSRC grant EP/G027110/1, by visiting fellowships at All Souls and Wadham Colleges in Oxford, and by a Research Scholarship from the Clay Mathematical Institute.
author:
- first_name: Tamas
full_name: Tamas Hausel
id: 4A0666D8-F248-11E8-B48F-1D18A9856A87
last_name: Hausel
- first_name: Emmanuel
full_name: Letellier, Emmanuel
last_name: Letellier
- first_name: Fernando
full_name: Rodríguez Villegas, Fernando
last_name: Rodríguez Villegas
citation:
ama: Hausel T, Letellier E, Rodríguez Villegas F. Arithmetic harmonic analysis on
character and quiver varieties. Duke Mathematical Journal. 2011;160(2):323-400.
doi:10.1215/00127094-1444258
apa: Hausel, T., Letellier, E., & Rodríguez Villegas, F. (2011). Arithmetic
harmonic analysis on character and quiver varieties. Duke Mathematical Journal.
Duke University Press. https://doi.org/10.1215/00127094-1444258
chicago: Hausel, Tamás, Emmanuel Letellier, and Fernando Rodríguez Villegas. “Arithmetic
Harmonic Analysis on Character and Quiver Varieties.” Duke Mathematical Journal.
Duke University Press, 2011. https://doi.org/10.1215/00127094-1444258.
ieee: T. Hausel, E. Letellier, and F. Rodríguez Villegas, “Arithmetic harmonic analysis
on character and quiver varieties,” Duke Mathematical Journal, vol. 160,
no. 2. Duke University Press, pp. 323–400, 2011.
ista: Hausel T, Letellier E, Rodríguez Villegas F. 2011. Arithmetic harmonic analysis
on character and quiver varieties. Duke Mathematical Journal. 160(2), 323–400.
mla: Hausel, Tamás, et al. “Arithmetic Harmonic Analysis on Character and Quiver
Varieties.” Duke Mathematical Journal, vol. 160, no. 2, Duke University
Press, 2011, pp. 323–400, doi:10.1215/00127094-1444258.
short: T. Hausel, E. Letellier, F. Rodríguez Villegas, Duke Mathematical Journal
160 (2011) 323–400.
date_created: 2018-12-11T11:52:11Z
date_published: 2011-01-01T00:00:00Z
date_updated: 2021-01-12T06:50:56Z
day: '01'
doi: 10.1215/00127094-1444258
extern: 1
intvolume: ' 160'
issue: '2'
main_file_link:
- open_access: '1'
url: http://arxiv.org/abs/0810.2076
month: '01'
oa: 1
page: 323 - 400
publication: Duke Mathematical Journal
publication_status: published
publisher: Duke University Press
publist_id: '5728'
quality_controlled: 0
status: public
title: Arithmetic harmonic analysis on character and quiver varieties
type: journal_article
volume: 160
year: '2011'
...
---
_id: '1781'
abstract:
- lang: eng
text: Microwave cavities with high quality factors enable coherent coupling of distant
quantum systems. Virtual photons lead to a transverse interaction between qubits
when they are nonresonant with the cavity but resonant with each other. We experimentally
investigate the inverse scaling of the interqubit coupling with the detuning from
a cavity mode and its proportionality to the qubit-cavity interaction strength.
We demonstrate that the enhanced coupling at higher frequencies is mediated by
multiple higher-harmonic cavity modes. Moreover, we observe dark states of the
coupled qubit-qubit system and analyze their relation to the symmetry of the applied
driving field at different frequencies.
acknowledgement: This work was supported by the Swiss National Science Foundation
(SNF), the Austrian Science Foundation (FWF), and ETH Zurich
author:
- first_name: Stefan
full_name: Filipp, Stefan
last_name: Filipp
- first_name: M
full_name: Göppl, M
last_name: Göppl
- first_name: Johannes M
full_name: Johannes Fink
id: 4B591CBA-F248-11E8-B48F-1D18A9856A87
last_name: Fink
orcid: 0000-0001-8112-028X
- first_name: Matthias
full_name: Baur, Matthias P
last_name: Baur
- first_name: R
full_name: Bianchetti, R
last_name: Bianchetti
- first_name: L.
full_name: Steffen, L. Kraig
last_name: Steffen
- first_name: Andreas
full_name: Wallraff, Andreas
last_name: Wallraff
citation:
ama: Filipp S, Göppl M, Fink JM, et al. Multimode mediated qubit-qubit coupling
and dark-state symmetries in circuit quantum electrodynamics. Physical Review
A - Atomic, Molecular, and Optical Physics. 2011;83(6). doi:10.1103/PhysRevA.83.063827
apa: Filipp, S., Göppl, M., Fink, J. M., Baur, M., Bianchetti, R., Steffen, L.,
& Wallraff, A. (2011). Multimode mediated qubit-qubit coupling and dark-state
symmetries in circuit quantum electrodynamics. Physical Review A - Atomic,
Molecular, and Optical Physics. American Physical Society. https://doi.org/10.1103/PhysRevA.83.063827
chicago: Filipp, Stefan, M Göppl, Johannes M Fink, Matthias Baur, R Bianchetti,
L. Steffen, and Andreas Wallraff. “Multimode Mediated Qubit-Qubit Coupling and
Dark-State Symmetries in Circuit Quantum Electrodynamics.” Physical Review
A - Atomic, Molecular, and Optical Physics. American Physical Society, 2011.
https://doi.org/10.1103/PhysRevA.83.063827.
ieee: S. Filipp et al., “Multimode mediated qubit-qubit coupling and dark-state
symmetries in circuit quantum electrodynamics,” Physical Review A - Atomic,
Molecular, and Optical Physics, vol. 83, no. 6. American Physical Society,
2011.
ista: Filipp S, Göppl M, Fink JM, Baur M, Bianchetti R, Steffen L, Wallraff A. 2011.
Multimode mediated qubit-qubit coupling and dark-state symmetries in circuit quantum
electrodynamics. Physical Review A - Atomic, Molecular, and Optical Physics. 83(6).
mla: Filipp, Stefan, et al. “Multimode Mediated Qubit-Qubit Coupling and Dark-State
Symmetries in Circuit Quantum Electrodynamics.” Physical Review A - Atomic,
Molecular, and Optical Physics, vol. 83, no. 6, American Physical Society,
2011, doi:10.1103/PhysRevA.83.063827.
short: S. Filipp, M. Göppl, J.M. Fink, M. Baur, R. Bianchetti, L. Steffen, A. Wallraff,
Physical Review A - Atomic, Molecular, and Optical Physics 83 (2011).
date_created: 2018-12-11T11:53:58Z
date_published: 2011-06-22T00:00:00Z
date_updated: 2021-01-12T06:53:09Z
day: '22'
doi: 10.1103/PhysRevA.83.063827
extern: 1
intvolume: ' 83'
issue: '6'
month: '06'
publication: Physical Review A - Atomic, Molecular, and Optical Physics
publication_status: published
publisher: American Physical Society
publist_id: '5335'
quality_controlled: 0
status: public
title: Multimode mediated qubit-qubit coupling and dark-state symmetries in circuit
quantum electrodynamics
type: journal_article
volume: 83
year: '2011'
...
---
OA_type: closed access
_id: '18012'
abstract:
- lang: eng
text: We report the first concurrent determination of conductance (G) and thermopower
(S) of single-molecule junctions via direct measurement of electrical and thermoelectric
currents using a scanning tunneling microscope-based break-junction technique.
We explore several amine-Au and pyridine-Au linked molecules that are predicted
to conduct through either the highest occupied molecular orbital (HOMO) or the
lowest unoccupied molecular orbital (LUMO), respectively. We find that the Seebeck
coefficient is negative for pyridine-Au linked LUMO-conducting junctions and positive
for amine-Au linked HOMO-conducting junctions. Within the accessible temperature
gradients (<30 K), we do not observe a strong dependence of the junction Seebeck
coefficient on temperature. From histograms of thousands of junctions, we use
the most probable Seebeck coefficient to determine a power factor, GS2, for each
junction studied, and find that GS2 increases with G. Finally, we find that conductance
and Seebeck coefficient values are in good quantitative agreement with our self-energy
corrected density functional theory calculations.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Jonathan R.
full_name: Widawsky, Jonathan R.
last_name: Widawsky
- first_name: Pierre
full_name: Darancet, Pierre
last_name: Darancet
- first_name: Jeffrey B.
full_name: Neaton, Jeffrey B.
last_name: Neaton
- first_name: Latha
full_name: Venkataraman, Latha
id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
last_name: Venkataraman
orcid: 0000-0002-6957-6089
citation:
ama: Widawsky JR, Darancet P, Neaton JB, Venkataraman L. Simultaneous determination
of conductance and thermopower of single molecule junctions. Nano Letters.
2011;12(1):354-358. doi:10.1021/nl203634m
apa: Widawsky, J. R., Darancet, P., Neaton, J. B., & Venkataraman, L. (2011).
Simultaneous determination of conductance and thermopower of single molecule junctions.
Nano Letters. American Chemical Society. https://doi.org/10.1021/nl203634m
chicago: Widawsky, Jonathan R., Pierre Darancet, Jeffrey B. Neaton, and Latha Venkataraman.
“Simultaneous Determination of Conductance and Thermopower of Single Molecule
Junctions.” Nano Letters. American Chemical Society, 2011. https://doi.org/10.1021/nl203634m.
ieee: J. R. Widawsky, P. Darancet, J. B. Neaton, and L. Venkataraman, “Simultaneous
determination of conductance and thermopower of single molecule junctions,” Nano
Letters, vol. 12, no. 1. American Chemical Society, pp. 354–358, 2011.
ista: Widawsky JR, Darancet P, Neaton JB, Venkataraman L. 2011. Simultaneous determination
of conductance and thermopower of single molecule junctions. Nano Letters. 12(1),
354–358.
mla: Widawsky, Jonathan R., et al. “Simultaneous Determination of Conductance and
Thermopower of Single Molecule Junctions.” Nano Letters, vol. 12, no. 1,
American Chemical Society, 2011, pp. 354–58, doi:10.1021/nl203634m.
short: J.R. Widawsky, P. Darancet, J.B. Neaton, L. Venkataraman, Nano Letters 12
(2011) 354–358.
date_created: 2024-09-09T12:32:14Z
date_published: 2011-11-30T00:00:00Z
date_updated: 2025-01-03T09:26:26Z
day: '30'
doi: 10.1021/nl203634m
extern: '1'
external_id:
pmid:
- '22128800'
intvolume: ' 12'
issue: '1'
language:
- iso: eng
month: '11'
oa_version: None
page: 354-358
pmid: 1
publication: Nano Letters
publication_identifier:
eissn:
- 1530-6992
issn:
- 1530-6984
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Simultaneous determination of conductance and thermopower of single molecule
junctions
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 12
year: '2011'
...
---
OA_place: repository
OA_type: green
_id: '18014'
abstract:
- lang: eng
text: We measure electronic conductance through single conjugated molecules bonded
to Au metal electrodes with direct Au–C covalent bonds using the scanning tunneling
microscope based break-junction technique. We start with molecules terminated
with trimethyltin end groups that cleave off in situ, resulting in formation of
a direct covalent σ bond between the carbon backbone and the gold metal electrodes.
The molecular carbon backbone used in this study consist of a conjugated π system
that has one terminal methylene group on each end, which bonds to the electrodes,
achieving large electronic coupling of the electrodes to the π system. The junctions
formed with the prototypical example of 1,4-dimethylenebenzene show a conductance
approaching one conductance quantum (G0 = 2e2/h). Junctions formed with methylene-terminated
oligophenyls with two to four phenyl units show a 100-fold increase in conductance
compared with junctions formed with amine-linked oligophenyls. The conduction
mechanism for these longer oligophenyls is tunneling, as they exhibit an exponential
dependence of conductance on oligomer length. In addition, density functional
theory based calculations for the Au–xylylene–Au junction show near-resonant transmission,
with a crossover to tunneling for the longer oligomers.
article_processing_charge: No
article_type: letter_note
arxiv: 1
author:
- first_name: Wenbo
full_name: Chen, Wenbo
last_name: Chen
- first_name: Jonathan R.
full_name: Widawsky, Jonathan R.
last_name: Widawsky
- first_name: Héctor
full_name: Vázquez, Héctor
last_name: Vázquez
- first_name: Severin T.
full_name: Schneebeli, Severin T.
last_name: Schneebeli
- first_name: Mark S.
full_name: Hybertsen, Mark S.
last_name: Hybertsen
- first_name: Ronald
full_name: Breslow, Ronald
last_name: Breslow
- first_name: Latha
full_name: Venkataraman, Latha
id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
last_name: Venkataraman
orcid: 0000-0002-6957-6089
citation:
ama: Chen W, Widawsky JR, Vázquez H, et al. Highly conducting π-conjugated molecular
junctions covalently bonded to gold electrodes. Journal of the American Chemical
Society. 2011;133(43):17160-17163. doi:10.1021/ja208020j
apa: Chen, W., Widawsky, J. R., Vázquez, H., Schneebeli, S. T., Hybertsen, M. S.,
Breslow, R., & Venkataraman, L. (2011). Highly conducting π-conjugated molecular
junctions covalently bonded to gold electrodes. Journal of the American Chemical
Society. American Chemical Society. https://doi.org/10.1021/ja208020j
chicago: Chen, Wenbo, Jonathan R. Widawsky, Héctor Vázquez, Severin T. Schneebeli,
Mark S. Hybertsen, Ronald Breslow, and Latha Venkataraman. “Highly Conducting
π-Conjugated Molecular Junctions Covalently Bonded to Gold Electrodes.” Journal
of the American Chemical Society. American Chemical Society, 2011. https://doi.org/10.1021/ja208020j.
ieee: W. Chen et al., “Highly conducting π-conjugated molecular junctions
covalently bonded to gold electrodes,” Journal of the American Chemical Society,
vol. 133, no. 43. American Chemical Society, pp. 17160–17163, 2011.
ista: Chen W, Widawsky JR, Vázquez H, Schneebeli ST, Hybertsen MS, Breslow R, Venkataraman
L. 2011. Highly conducting π-conjugated molecular junctions covalently bonded
to gold electrodes. Journal of the American Chemical Society. 133(43), 17160–17163.
mla: Chen, Wenbo, et al. “Highly Conducting π-Conjugated Molecular Junctions Covalently
Bonded to Gold Electrodes.” Journal of the American Chemical Society, vol.
133, no. 43, American Chemical Society, 2011, pp. 17160–63, doi:10.1021/ja208020j.
short: W. Chen, J.R. Widawsky, H. Vázquez, S.T. Schneebeli, M.S. Hybertsen, R. Breslow,
L. Venkataraman, Journal of the American Chemical Society 133 (2011) 17160–17163.
date_created: 2024-09-09T12:33:46Z
date_published: 2011-09-22T00:00:00Z
date_updated: 2025-01-03T09:34:24Z
day: '22'
doi: 10.1021/ja208020j
extern: '1'
external_id:
arxiv:
- '1110.0344'
pmid:
- '21939263'
intvolume: ' 133'
issue: '43'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/1110.0344
month: '09'
oa: 1
oa_version: Preprint
page: 17160-17163
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
eissn:
- 1520-5126
issn:
- 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Highly conducting π-conjugated molecular junctions covalently bonded to gold
electrodes
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 133
year: '2011'
...
---
OA_type: closed access
_id: '18015'
abstract:
- lang: eng
text: We investigate the binding and energy level alignment of 2,3,5,6-tetramethyl-1,4-benzenediamine
(TMBDA) on Au(111) through a combination of helium atom scattering (HAS), X-ray
photoemission (XPS), and scanning tunneling microscopy (STM). We show that TMBDA
binds to step edges and to flat Au (111) terraces in a nearly flat-lying configuration.
Through combination of HAS and STM data, we determine that the molecules are bound
on step edges with an adsorption energy of about 1.2 eV, which is about 0.2 eV
stronger than the adsorption energy we measure on flat surface. Preferential bonding
to the under-coordinated Au atoms on step edges suggests that the molecules bind
to Au through the nitrogen lone pair. Finally, STM measurements on TMBDA in these
two different adsorption configurations show that the highest-occupied molecular
orbital is deeper relative to Fermi for the more strongly bound molecules on step
edges, confirming that the nitrogen bonds through charge donation to the Au.
article_processing_charge: No
article_type: original
author:
- first_name: M.
full_name: Kamenetska, M.
last_name: Kamenetska
- first_name: M.
full_name: Dell’Angela, M.
last_name: Dell’Angela
- first_name: J.R.
full_name: Widawsky, J.R.
last_name: Widawsky
- first_name: G.
full_name: Kladnik, G.
last_name: Kladnik
- first_name: A.
full_name: Verdini, A.
last_name: Verdini
- first_name: A.
full_name: Cossaro, A.
last_name: Cossaro
- first_name: D.
full_name: Cvetko, D.
last_name: Cvetko
- first_name: A.
full_name: Morgante, A.
last_name: Morgante
- first_name: Latha
full_name: Venkataraman, Latha
id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
last_name: Venkataraman
orcid: 0000-0002-6957-6089
citation:
ama: Kamenetska M, Dell’Angela M, Widawsky JR, et al. Structure and energy level
alignment of tetramethyl benzenediamine on Au(111). The Journal of Physical
Chemistry C. 2011;115(25):12625-12630. doi:10.1021/jp202555d
apa: Kamenetska, M., Dell’Angela, M., Widawsky, J. R., Kladnik, G., Verdini, A.,
Cossaro, A., … Venkataraman, L. (2011). Structure and energy level alignment of
tetramethyl benzenediamine on Au(111). The Journal of Physical Chemistry C.
American Chemical Society. https://doi.org/10.1021/jp202555d
chicago: Kamenetska, M., M. Dell’Angela, J.R. Widawsky, G. Kladnik, A. Verdini,
A. Cossaro, D. Cvetko, A. Morgante, and Latha Venkataraman. “Structure and Energy
Level Alignment of Tetramethyl Benzenediamine on Au(111).” The Journal of Physical
Chemistry C. American Chemical Society, 2011. https://doi.org/10.1021/jp202555d.
ieee: M. Kamenetska et al., “Structure and energy level alignment of tetramethyl
benzenediamine on Au(111),” The Journal of Physical Chemistry C, vol. 115,
no. 25. American Chemical Society, pp. 12625–12630, 2011.
ista: Kamenetska M, Dell’Angela M, Widawsky JR, Kladnik G, Verdini A, Cossaro A,
Cvetko D, Morgante A, Venkataraman L. 2011. Structure and energy level alignment
of tetramethyl benzenediamine on Au(111). The Journal of Physical Chemistry C.
115(25), 12625–12630.
mla: Kamenetska, M., et al. “Structure and Energy Level Alignment of Tetramethyl
Benzenediamine on Au(111).” The Journal of Physical Chemistry C, vol. 115,
no. 25, American Chemical Society, 2011, pp. 12625–30, doi:10.1021/jp202555d.
short: M. Kamenetska, M. Dell’Angela, J.R. Widawsky, G. Kladnik, A. Verdini, A.
Cossaro, D. Cvetko, A. Morgante, L. Venkataraman, The Journal of Physical Chemistry
C 115 (2011) 12625–12630.
date_created: 2024-09-09T12:34:26Z
date_published: 2011-05-17T00:00:00Z
date_updated: 2025-01-03T09:36:40Z
day: '17'
doi: 10.1021/jp202555d
extern: '1'
intvolume: ' 115'
issue: '25'
language:
- iso: eng
month: '05'
oa_version: None
page: 12625-12630
publication: The Journal of Physical Chemistry C
publication_identifier:
eissn:
- 1932-7455
issn:
- 1932-7447
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Structure and energy level alignment of tetramethyl benzenediamine on Au(111)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 115
year: '2011'
...
---
OA_type: closed access
_id: '18016'
abstract:
- lang: eng
text: Understanding the electrical properties of semiconducting quantum dot devices
have been limited due to the variability of their size/composition and the chemistry
of ligand/electrode binding. Furthermore, to probe their electrical conduction
properties and its dependence on ligand/electrode binding, measurements must be
carried out at the single dot/cluster level. Herein we report scanning tunneling
microscope based break junction measurements of cobalt chalcogenide clusters with
Te, Se and S to probe the conductance properties. Our measured conductance trends
show that the Co–Te based clusters have the highest conductance while the Co-S
clusters the lowest. These trends are in very good agreement with cyclic voltammetry
measurements of the first oxidation potentials and with density functional theory
calculations of their HOMO–LUMO gaps.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Brycelyn M.
full_name: Boardman, Brycelyn M.
last_name: Boardman
- first_name: Jonathan R.
full_name: Widawsky, Jonathan R.
last_name: Widawsky
- first_name: Young S.
full_name: Park, Young S.
last_name: Park
- first_name: Christine L.
full_name: Schenck, Christine L.
last_name: Schenck
- first_name: Latha
full_name: Venkataraman, Latha
id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
last_name: Venkataraman
orcid: 0000-0002-6957-6089
- first_name: Michael L.
full_name: Steigerwald, Michael L.
last_name: Steigerwald
- first_name: Colin
full_name: Nuckolls, Colin
last_name: Nuckolls
citation:
ama: Boardman BM, Widawsky JR, Park YS, et al. Conductance of single cobalt chalcogenide
cluster junctions. Journal of the American Chemical Society. 2011;133(22):8455-8457.
doi:10.1021/ja201334s
apa: Boardman, B. M., Widawsky, J. R., Park, Y. S., Schenck, C. L., Venkataraman,
L., Steigerwald, M. L., & Nuckolls, C. (2011). Conductance of single cobalt
chalcogenide cluster junctions. Journal of the American Chemical Society.
American Chemical Society. https://doi.org/10.1021/ja201334s
chicago: Boardman, Brycelyn M., Jonathan R. Widawsky, Young S. Park, Christine L.
Schenck, Latha Venkataraman, Michael L. Steigerwald, and Colin Nuckolls. “Conductance
of Single Cobalt Chalcogenide Cluster Junctions.” Journal of the American Chemical
Society. American Chemical Society, 2011. https://doi.org/10.1021/ja201334s.
ieee: B. M. Boardman et al., “Conductance of single cobalt chalcogenide cluster
junctions,” Journal of the American Chemical Society, vol. 133, no. 22.
American Chemical Society, pp. 8455–8457, 2011.
ista: Boardman BM, Widawsky JR, Park YS, Schenck CL, Venkataraman L, Steigerwald
ML, Nuckolls C. 2011. Conductance of single cobalt chalcogenide cluster junctions.
Journal of the American Chemical Society. 133(22), 8455–8457.
mla: Boardman, Brycelyn M., et al. “Conductance of Single Cobalt Chalcogenide Cluster
Junctions.” Journal of the American Chemical Society, vol. 133, no. 22,
American Chemical Society, 2011, pp. 8455–57, doi:10.1021/ja201334s.
short: B.M. Boardman, J.R. Widawsky, Y.S. Park, C.L. Schenck, L. Venkataraman, M.L.
Steigerwald, C. Nuckolls, Journal of the American Chemical Society 133 (2011)
8455–8457.
date_created: 2024-09-09T12:35:04Z
date_published: 2011-05-03T00:00:00Z
date_updated: 2025-01-03T09:38:32Z
day: '03'
doi: 10.1021/ja201334s
extern: '1'
external_id:
pmid:
- '21539375'
intvolume: ' 133'
issue: '22'
language:
- iso: eng
month: '05'
oa_version: None
page: 8455-8457
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
eissn:
- 1520-5126
issn:
- 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Conductance of single cobalt chalcogenide cluster junctions
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 133
year: '2011'
...
---
OA_type: closed access
_id: '18017'
abstract:
- lang: eng
text: The conductance of individual 1,4-benzenediamine (BDA)–Au molecular junctions
is measured in different solvent environments using a scanning tunneling microscope
based point-contact technique. Solvents are found to increase the conductance
of these molecular junctions by as much as 50%. Using first principles calculations,
we explain this increase by showing that a shift in the Au contact work function
is induced by solvents binding to undercoordinated Au sites around the junction.
Increasing the Au contact work function reduces the separation between the Au
Fermi energy and the highest occupied molecular orbital of BDA in the junction,
increasing the measured conductance. We demonstrate that the solvent-induced shift
in conductance depends on the affinity of the solvent to Au binding sites and
also on the induced dipole (relative to BDA) upon adsorption. Via this mechanism,
molecular junction level alignment and transport properties can be statistically
altered by solvent molecule binding to the contact surface.
article_processing_charge: No
article_type: letter_note
author:
- first_name: V.
full_name: Fatemi, V.
last_name: Fatemi
- first_name: M.
full_name: Kamenetska, M.
last_name: Kamenetska
- first_name: J. B.
full_name: Neaton, J. B.
last_name: Neaton
- first_name: Latha
full_name: Venkataraman, Latha
id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
last_name: Venkataraman
orcid: 0000-0002-6957-6089
citation:
ama: Fatemi V, Kamenetska M, Neaton JB, Venkataraman L. Environmental control of
single-molecule junction transport. Nano Letters. 2011;11(5):1988-1992.
doi:10.1021/nl200324e
apa: Fatemi, V., Kamenetska, M., Neaton, J. B., & Venkataraman, L. (2011). Environmental
control of single-molecule junction transport. Nano Letters. American Chemical
Society. https://doi.org/10.1021/nl200324e
chicago: Fatemi, V., M. Kamenetska, J. B. Neaton, and Latha Venkataraman. “Environmental
Control of Single-Molecule Junction Transport.” Nano Letters. American
Chemical Society, 2011. https://doi.org/10.1021/nl200324e.
ieee: V. Fatemi, M. Kamenetska, J. B. Neaton, and L. Venkataraman, “Environmental
control of single-molecule junction transport,” Nano Letters, vol. 11,
no. 5. American Chemical Society, pp. 1988–1992, 2011.
ista: Fatemi V, Kamenetska M, Neaton JB, Venkataraman L. 2011. Environmental control
of single-molecule junction transport. Nano Letters. 11(5), 1988–1992.
mla: Fatemi, V., et al. “Environmental Control of Single-Molecule Junction Transport.”
Nano Letters, vol. 11, no. 5, American Chemical Society, 2011, pp. 1988–92,
doi:10.1021/nl200324e.
short: V. Fatemi, M. Kamenetska, J.B. Neaton, L. Venkataraman, Nano Letters 11 (2011)
1988–1992.
date_created: 2024-09-09T12:35:47Z
date_published: 2011-04-18T00:00:00Z
date_updated: 2025-01-03T09:43:09Z
day: '18'
doi: 10.1021/nl200324e
extern: '1'
external_id:
pmid:
- '21500833'
intvolume: ' 11'
issue: '5'
language:
- iso: eng
month: '04'
oa_version: None
page: 1988-1992
pmid: 1
publication: Nano Letters
publication_identifier:
eissn:
- 1530-6992
issn:
- 1530-6984
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Environmental control of single-molecule junction transport
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 11
year: '2011'
...
---
OA_type: closed access
_id: '18018'
abstract:
- lang: eng
text: Controlling electron transport through a single-molecule device is key to
the realization of nanoscale electronic components. A design requirement for single
molecule electrical devices is that the molecule must be both structurally and
electrically connected to the metallic electrodes. Typically, the mechanical and
electrical contacts are achieved by the same chemical moiety. In this study, we
demonstrate that the structural role may be played by one group (for example,
a sulfide) while the electrical role may be played by another (a conjugated chain
of C═C π-bonds). We can specify the electrical conductance through the molecule
by modulating to which particular site on the oligoene chain the electrode binds.
The result is a device that functions as a potentiometer at the single-molecule
level.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Jeffrey S.
full_name: Meisner, Jeffrey S.
last_name: Meisner
- first_name: Masha
full_name: Kamenetska, Masha
last_name: Kamenetska
- first_name: Markrete
full_name: Krikorian, Markrete
last_name: Krikorian
- first_name: Michael L.
full_name: Steigerwald, Michael L.
last_name: Steigerwald
- first_name: Latha
full_name: Venkataraman, Latha
id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
last_name: Venkataraman
orcid: 0000-0002-6957-6089
- first_name: Colin
full_name: Nuckolls, Colin
last_name: Nuckolls
citation:
ama: Meisner JS, Kamenetska M, Krikorian M, Steigerwald ML, Venkataraman L, Nuckolls
C. A single-molecule potentiometer. Nano Letters. 2011;11(4):1575-1579.
doi:10.1021/nl104411f
apa: Meisner, J. S., Kamenetska, M., Krikorian, M., Steigerwald, M. L., Venkataraman,
L., & Nuckolls, C. (2011). A single-molecule potentiometer. Nano Letters.
American Chemical Society. https://doi.org/10.1021/nl104411f
chicago: Meisner, Jeffrey S., Masha Kamenetska, Markrete Krikorian, Michael L. Steigerwald,
Latha Venkataraman, and Colin Nuckolls. “A Single-Molecule Potentiometer.” Nano
Letters. American Chemical Society, 2011. https://doi.org/10.1021/nl104411f.
ieee: J. S. Meisner, M. Kamenetska, M. Krikorian, M. L. Steigerwald, L. Venkataraman,
and C. Nuckolls, “A single-molecule potentiometer,” Nano Letters, vol.
11, no. 4. American Chemical Society, pp. 1575–1579, 2011.
ista: Meisner JS, Kamenetska M, Krikorian M, Steigerwald ML, Venkataraman L, Nuckolls
C. 2011. A single-molecule potentiometer. Nano Letters. 11(4), 1575–1579.
mla: Meisner, Jeffrey S., et al. “A Single-Molecule Potentiometer.” Nano Letters,
vol. 11, no. 4, American Chemical Society, 2011, pp. 1575–79, doi:10.1021/nl104411f.
short: J.S. Meisner, M. Kamenetska, M. Krikorian, M.L. Steigerwald, L. Venkataraman,
C. Nuckolls, Nano Letters 11 (2011) 1575–1579.
date_created: 2024-09-09T12:36:26Z
date_published: 2011-03-17T00:00:00Z
date_updated: 2025-01-03T09:45:24Z
day: '17'
doi: 10.1021/nl104411f
extern: '1'
external_id:
pmid:
- '21413779'
intvolume: ' 11'
issue: '4'
language:
- iso: eng
month: '03'
oa_version: None
page: 1575-1579
pmid: 1
publication: Nano Letters
publication_identifier:
eissn:
- 1530-6992
issn:
- 1530-6984
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: A single-molecule potentiometer
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 11
year: '2011'
...
---
OA_type: closed access
_id: '18019'
abstract:
- lang: eng
text: We simultaneously measure conductance and force across nanoscale junctions.
A new, two-dimensional histogram technique is introduced to statistically extract
bond rupture forces from a large data set of individual junction elongation traces.
For the case of Au point contacts, we find a rupture force of 1.4 ± 0.2 nN, which
is in good agreement with previous measurements. We then study systematic trends
for single gold metal−molecule−metal junctions for a series of molecules terminated
with amine and pyridine linkers. For all molecules studied, single molecule junctions
rupture at the Au−N bond. Selective binding of the linker group allows us to correlate
the N−Au bond-rupture force to the molecular backbone. We find that the rupture
force ranges from 0.8 nN for 4,4′ bipyridine to 0.5 nN in 1,4 diaminobenzene.
These experimental results are in excellent quantitative agreement with density
functional theory based adiabatic molecular junction elongation and rupture calculations.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Michael
full_name: Frei, Michael
last_name: Frei
- first_name: Sriharsha V.
full_name: Aradhya, Sriharsha V.
last_name: Aradhya
- first_name: Max
full_name: Koentopp, Max
last_name: Koentopp
- first_name: Mark S.
full_name: Hybertsen, Mark S.
last_name: Hybertsen
- first_name: Latha
full_name: Venkataraman, Latha
id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
last_name: Venkataraman
orcid: 0000-0002-6957-6089
citation:
ama: 'Frei M, Aradhya SV, Koentopp M, Hybertsen MS, Venkataraman L. Mechanics and
chemistry: Single molecule bond rupture forces correlate with molecular backbone
structure. Nano Letters. 2011;11(4):1518-1523. doi:10.1021/nl1042903'
apa: 'Frei, M., Aradhya, S. V., Koentopp, M., Hybertsen, M. S., & Venkataraman,
L. (2011). Mechanics and chemistry: Single molecule bond rupture forces correlate
with molecular backbone structure. Nano Letters. American Chemical Society.
https://doi.org/10.1021/nl1042903'
chicago: 'Frei, Michael, Sriharsha V. Aradhya, Max Koentopp, Mark S. Hybertsen,
and Latha Venkataraman. “Mechanics and Chemistry: Single Molecule Bond Rupture
Forces Correlate with Molecular Backbone Structure.” Nano Letters. American
Chemical Society, 2011. https://doi.org/10.1021/nl1042903.'
ieee: 'M. Frei, S. V. Aradhya, M. Koentopp, M. S. Hybertsen, and L. Venkataraman,
“Mechanics and chemistry: Single molecule bond rupture forces correlate with molecular
backbone structure,” Nano Letters, vol. 11, no. 4. American Chemical Society,
pp. 1518–1523, 2011.'
ista: 'Frei M, Aradhya SV, Koentopp M, Hybertsen MS, Venkataraman L. 2011. Mechanics
and chemistry: Single molecule bond rupture forces correlate with molecular backbone
structure. Nano Letters. 11(4), 1518–1523.'
mla: 'Frei, Michael, et al. “Mechanics and Chemistry: Single Molecule Bond Rupture
Forces Correlate with Molecular Backbone Structure.” Nano Letters, vol.
11, no. 4, American Chemical Society, 2011, pp. 1518–23, doi:10.1021/nl1042903.'
short: M. Frei, S.V. Aradhya, M. Koentopp, M.S. Hybertsen, L. Venkataraman, Nano
Letters 11 (2011) 1518–1523.
date_created: 2024-09-09T12:37:10Z
date_published: 2011-03-02T00:00:00Z
date_updated: 2025-01-03T09:47:07Z
day: '02'
doi: 10.1021/nl1042903
extern: '1'
external_id:
pmid:
- '21366230'
intvolume: ' 11'
issue: '4'
language:
- iso: eng
month: '03'
oa_version: None
page: 1518-1523
pmid: 1
publication: Nano Letters
publication_identifier:
eissn:
- 1530-6992
issn:
- 1530-6984
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Mechanics and chemistry: Single molecule bond rupture forces correlate with
molecular backbone structure'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 11
year: '2011'
...
---
OA_type: closed access
_id: '18020'
abstract:
- lang: eng
text: Understanding electron transport across π−π-stacked systems will help to answer
fundamental questions about biochemical redox processes and benefit the design
of new materials and molecular devices. Herein we employed the STM break-junction
technique to measure the single-molecule conductance of multiple π−π-stacked aromatic
rings. We studied electron transport through up to four stacked benzene rings
held together in an eclipsed fashion via a paracyclophane scaffold. We found that
the strained hydrocarbons studied herein couple directly to gold electrodes during
the measurements; hence, we did not require any heteroatom binding groups as electrical
contacts. Density functional theory-based calculations suggest that the gold atoms
of the electrodes bind to two neighboring carbon atoms of the outermost cyclophane
benzene rings in η2 fashion. Our measurements show an exponential decay of the
conductance with an increasing number of stacked benzene rings, indicating a nonresonant
tunneling mechanism. Furthermore, STM tip−substrate displacement data provide
additional evidence that the electrodes bind to the outermost benzene rings of
the π−π-stacked molecular wires.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Severin T.
full_name: Schneebeli, Severin T.
last_name: Schneebeli
- first_name: Maria
full_name: Kamenetska, Maria
last_name: Kamenetska
- first_name: Zhanling
full_name: Cheng, Zhanling
last_name: Cheng
- first_name: Rachid
full_name: Skouta, Rachid
last_name: Skouta
- first_name: Richard A.
full_name: Friesner, Richard A.
last_name: Friesner
- first_name: Latha
full_name: Venkataraman, Latha
id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
last_name: Venkataraman
orcid: 0000-0002-6957-6089
- first_name: Ronald
full_name: Breslow, Ronald
last_name: Breslow
citation:
ama: Schneebeli ST, Kamenetska M, Cheng Z, et al. Single-molecule conductance through
multiple π−π-stacked benzene rings determined with direct electrode-to-benzene
ring connections. Journal of the American Chemical Society. 2011;133(7):2136-2139.
doi:10.1021/ja111320n
apa: Schneebeli, S. T., Kamenetska, M., Cheng, Z., Skouta, R., Friesner, R. A.,
Venkataraman, L., & Breslow, R. (2011). Single-molecule conductance through
multiple π−π-stacked benzene rings determined with direct electrode-to-benzene
ring connections. Journal of the American Chemical Society. American Chemical
Society. https://doi.org/10.1021/ja111320n
chicago: Schneebeli, Severin T., Maria Kamenetska, Zhanling Cheng, Rachid Skouta,
Richard A. Friesner, Latha Venkataraman, and Ronald Breslow. “Single-Molecule
Conductance through Multiple Π−π-Stacked Benzene Rings Determined with Direct
Electrode-to-Benzene Ring Connections.” Journal of the American Chemical Society.
American Chemical Society, 2011. https://doi.org/10.1021/ja111320n.
ieee: S. T. Schneebeli et al., “Single-molecule conductance through multiple
π−π-stacked benzene rings determined with direct electrode-to-benzene ring connections,”
Journal of the American Chemical Society, vol. 133, no. 7. American Chemical
Society, pp. 2136–2139, 2011.
ista: Schneebeli ST, Kamenetska M, Cheng Z, Skouta R, Friesner RA, Venkataraman
L, Breslow R. 2011. Single-molecule conductance through multiple π−π-stacked benzene
rings determined with direct electrode-to-benzene ring connections. Journal of
the American Chemical Society. 133(7), 2136–2139.
mla: Schneebeli, Severin T., et al. “Single-Molecule Conductance through Multiple
Π−π-Stacked Benzene Rings Determined with Direct Electrode-to-Benzene Ring Connections.”
Journal of the American Chemical Society, vol. 133, no. 7, American Chemical
Society, 2011, pp. 2136–39, doi:10.1021/ja111320n.
short: S.T. Schneebeli, M. Kamenetska, Z. Cheng, R. Skouta, R.A. Friesner, L. Venkataraman,
R. Breslow, Journal of the American Chemical Society 133 (2011) 2136–2139.
date_created: 2024-09-09T12:57:08Z
date_published: 2011-01-25T00:00:00Z
date_updated: 2025-01-03T09:49:00Z
day: '25'
doi: 10.1021/ja111320n
extern: '1'
external_id:
pmid:
- '21265533'
intvolume: ' 133'
issue: '7'
language:
- iso: eng
month: '01'
oa_version: None
page: 2136-2139
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
eissn:
- 1520-5126
issn:
- 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Single-molecule conductance through multiple π−π-stacked benzene rings determined
with direct electrode-to-benzene ring connections
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 133
year: '2011'
...
---
OA_type: closed access
_id: '18021'
abstract:
- lang: eng
text: Charge transport across metal–molecule interfaces has an important role in
organic electronics1. Typically, chemical link groups such as thiols2 or amines3
are used to bind organic molecules to metal electrodes in single-molecule circuits,
with these groups controlling both the physical structure and the electronic coupling
at the interface. Direct metal–carbon coupling has been shown through C60, benzene
and π-stacked benzene4,5,6,7, but ideally the carbon backbone of the molecule
should be covalently bonded to the electrode without intervening link groups.
Here, we demonstrate a method to create junctions with such contacts. Trimethyl
tin (SnMe3)-terminated polymethylene chains are used to form single-molecule junctions
with a break-junction technique2,3. Gold atoms at the electrode displace the SnMe3
linkers, leading to the formation of direct Au–C bonded single-molecule junctions
with a conductance that is ∼100 times larger than analogous alkanes with most
other terminations. The conductance of these Au–C bonded alkanes decreases exponentially
with molecular length, with a decay constant of 0.97 per methylene, consistent
with a non-resonant transport mechanism. Control experiments and ab initio calculations
show that high conductances are achieved because a covalent Au–C sigma (σ) bond
is formed. This offers a new method for making reproducible and highly conducting
metal–organic contacts.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Z.-L.
full_name: Cheng, Z.-L.
last_name: Cheng
- first_name: R.
full_name: Skouta, R.
last_name: Skouta
- first_name: H.
full_name: Vazquez, H.
last_name: Vazquez
- first_name: J. R.
full_name: Widawsky, J. R.
last_name: Widawsky
- first_name: S.
full_name: Schneebeli, S.
last_name: Schneebeli
- first_name: W.
full_name: Chen, W.
last_name: Chen
- first_name: M. S.
full_name: Hybertsen, M. S.
last_name: Hybertsen
- first_name: R.
full_name: Breslow, R.
last_name: Breslow
- first_name: Latha
full_name: Venkataraman, Latha
id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
last_name: Venkataraman
orcid: 0000-0002-6957-6089
citation:
ama: Cheng Z-L, Skouta R, Vazquez H, et al. In situ formation of highly conducting
covalent Au–C contacts for single-molecule junctions. Nature Nanotechnology.
2011;6(6):353-357. doi:10.1038/nnano.2011.66
apa: Cheng, Z.-L., Skouta, R., Vazquez, H., Widawsky, J. R., Schneebeli, S., Chen,
W., … Venkataraman, L. (2011). In situ formation of highly conducting covalent
Au–C contacts for single-molecule junctions. Nature Nanotechnology. Springer
Nature. https://doi.org/10.1038/nnano.2011.66
chicago: Cheng, Z.-L., R. Skouta, H. Vazquez, J. R. Widawsky, S. Schneebeli, W.
Chen, M. S. Hybertsen, R. Breslow, and Latha Venkataraman. “In Situ Formation
of Highly Conducting Covalent Au–C Contacts for Single-Molecule Junctions.” Nature
Nanotechnology. Springer Nature, 2011. https://doi.org/10.1038/nnano.2011.66.
ieee: Z.-L. Cheng et al., “In situ formation of highly conducting covalent
Au–C contacts for single-molecule junctions,” Nature Nanotechnology, vol.
6, no. 6. Springer Nature, pp. 353–357, 2011.
ista: Cheng Z-L, Skouta R, Vazquez H, Widawsky JR, Schneebeli S, Chen W, Hybertsen
MS, Breslow R, Venkataraman L. 2011. In situ formation of highly conducting covalent
Au–C contacts for single-molecule junctions. Nature Nanotechnology. 6(6), 353–357.
mla: Cheng, Z. L., et al. “In Situ Formation of Highly Conducting Covalent Au–C
Contacts for Single-Molecule Junctions.” Nature Nanotechnology, vol. 6,
no. 6, Springer Nature, 2011, pp. 353–57, doi:10.1038/nnano.2011.66.
short: Z.-L. Cheng, R. Skouta, H. Vazquez, J.R. Widawsky, S. Schneebeli, W. Chen,
M.S. Hybertsen, R. Breslow, L. Venkataraman, Nature Nanotechnology 6 (2011) 353–357.
date_created: 2024-09-09T12:57:48Z
date_published: 2011-06-01T00:00:00Z
date_updated: 2025-01-03T09:51:33Z
day: '01'
doi: 10.1038/nnano.2011.66
extern: '1'
external_id:
pmid:
- '21552252'
intvolume: ' 6'
issue: '6'
language:
- iso: eng
month: '06'
oa_version: None
page: 353-357
pmid: 1
publication: Nature Nanotechnology
publication_identifier:
eissn:
- 1748-3395
issn:
- 1748-3387
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: In situ formation of highly conducting covalent Au–C contacts for single-molecule
junctions
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 6
year: '2011'
...
---
_id: '1815'
abstract:
- lang: eng
text: Many membrane channels and receptors exhibit adaptive, or desensitized, response
to a strong sustained input stimulus, often supported by protein activity-dependent
inactivation. Adaptive response is thought to be related to various cellular functions
such as homeostasis and enlargement of dynamic range by background compensation.
Here we study the quantitative relation between adaptive response and background
compensation within a modeling framework. We show that any particular type of
adaptive response is neither sufficient nor necessary for adaptive enlargement
of dynamic range. In particular a precise adaptive response, where system activity
is maintained at a constant level at steady state, does not ensure a large dynamic
range neither in input signal nor in system output. A general mechanism for input
dynamic range enlargement can come about from the activity-dependent modulation
of protein responsiveness by multiple biochemical modification, regardless of
the type of adaptive response it induces. Therefore hierarchical biochemical processes
such as methylation and phosphorylation are natural candidates to induce this
property in signaling systems.
author:
- first_name: Tamar
full_name: Tamar Friedlander
id: 36A5845C-F248-11E8-B48F-1D18A9856A87
last_name: Friedlander
- first_name: Naama
full_name: Brenner, Naama
last_name: Brenner
citation:
ama: Friedlander T, Brenner N. Adaptive response and enlargement of dynamic range.
Mathematical Biosciences and Engineering. 2011;8(2):515-526. doi:10.3934/mbe.2011.8.515
apa: Friedlander, T., & Brenner, N. (2011). Adaptive response and enlargement
of dynamic range. Mathematical Biosciences and Engineering. Arizona State
University. https://doi.org/10.3934/mbe.2011.8.515
chicago: Friedlander, Tamar, and Naama Brenner. “Adaptive Response and Enlargement
of Dynamic Range.” Mathematical Biosciences and Engineering. Arizona State
University, 2011. https://doi.org/10.3934/mbe.2011.8.515.
ieee: T. Friedlander and N. Brenner, “Adaptive response and enlargement of dynamic
range,” Mathematical Biosciences and Engineering, vol. 8, no. 2. Arizona
State University, pp. 515–526, 2011.
ista: Friedlander T, Brenner N. 2011. Adaptive response and enlargement of dynamic
range. Mathematical Biosciences and Engineering. 8(2), 515–526.
mla: Friedlander, Tamar, and Naama Brenner. “Adaptive Response and Enlargement of
Dynamic Range.” Mathematical Biosciences and Engineering, vol. 8, no. 2,
Arizona State University, 2011, pp. 515–26, doi:10.3934/mbe.2011.8.515.
short: T. Friedlander, N. Brenner, Mathematical Biosciences and Engineering 8 (2011)
515–526.
date_created: 2018-12-11T11:54:10Z
date_published: 2011-04-02T00:00:00Z
date_updated: 2021-01-12T06:53:23Z
day: '02'
doi: 10.3934/mbe.2011.8.515
extern: 1
intvolume: ' 8'
issue: '2'
main_file_link:
- open_access: '1'
url: http://arxiv.org/abs/1003.2791
month: '04'
oa: 1
page: 515 - 526
publication: Mathematical Biosciences and Engineering
publication_status: published
publisher: Arizona State University
publist_id: '5291'
quality_controlled: 0
status: public
title: Adaptive response and enlargement of dynamic range
type: journal_article
volume: 8
year: '2011'
...
---
OA_place: repository
OA_type: green
_id: '18362'
abstract:
- lang: eng
text: Maximally stable component detection is a very popular method for feature
analysis in images, mainly due to its low computation cost and high repeatability.
With the recent advance of feature-based methods in geometric shape analysis,
there is significant interest in finding analogous approaches in the 3D world.
In this paper, we formulate a diffusion-geometric framework for stable component
detection in non-rigid 3D shapes, which can be used for geometric feature detection
and description. A quantitative evaluation of our method on the SHREC’10 feature
detection benchmark shows its potential as a source of high-quality features.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Roee
full_name: Litman, Roee
last_name: Litman
- first_name: Alexander
full_name: Bronstein, Alexander
id: 58f3726e-7cba-11ef-ad8b-e6e8cb3904e6
last_name: Bronstein
orcid: 0000-0001-9699-8730
- first_name: Michael M.
full_name: Bronstein, Michael M.
last_name: Bronstein
citation:
ama: Litman R, Bronstein AM, Bronstein MM. Diffusion-geometric maximally stable
component detection in deformable shapes. Computers & Graphics. 2011;35(3):549-560.
doi:10.1016/j.cag.2011.03.011
apa: Litman, R., Bronstein, A. M., & Bronstein, M. M. (2011). Diffusion-geometric
maximally stable component detection in deformable shapes. Computers &
Graphics. Elsevier. https://doi.org/10.1016/j.cag.2011.03.011
chicago: Litman, Roee, Alex M. Bronstein, and Michael M. Bronstein. “Diffusion-Geometric
Maximally Stable Component Detection in Deformable Shapes.” Computers &
Graphics. Elsevier, 2011. https://doi.org/10.1016/j.cag.2011.03.011.
ieee: R. Litman, A. M. Bronstein, and M. M. Bronstein, “Diffusion-geometric maximally
stable component detection in deformable shapes,” Computers & Graphics,
vol. 35, no. 3. Elsevier, pp. 549–560, 2011.
ista: Litman R, Bronstein AM, Bronstein MM. 2011. Diffusion-geometric maximally
stable component detection in deformable shapes. Computers & Graphics. 35(3),
549–560.
mla: Litman, Roee, et al. “Diffusion-Geometric Maximally Stable Component Detection
in Deformable Shapes.” Computers & Graphics, vol. 35, no. 3, Elsevier,
2011, pp. 549–60, doi:10.1016/j.cag.2011.03.011.
short: R. Litman, A.M. Bronstein, M.M. Bronstein, Computers & Graphics 35 (2011)
549–560.
date_created: 2024-10-15T11:20:54Z
date_published: 2011-06-01T00:00:00Z
date_updated: 2024-11-12T08:40:40Z
day: '01'
doi: 10.1016/j.cag.2011.03.011
extern: '1'
external_id:
arxiv:
- '1012.3951'
intvolume: ' 35'
issue: '3'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.48550/arXiv.1012.3951
month: '06'
oa: 1
oa_version: Preprint
page: 549-560
publication: Computers & Graphics
publication_identifier:
issn:
- 0097-8493
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Diffusion-geometric maximally stable component detection in deformable shapes
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 35
year: '2011'
...
---
OA_place: repository
OA_type: green
_id: '18363'
abstract:
- lang: eng
text: "Natural objects can be subject to various transformations yet still preserve
properties that we refer to as invariants. Here, we use definitions of affine-invariant
arclength for surfaces in \r\n in order to extend the set of existing non-rigid
shape analysis tools. We show that by re-defining the surface metric as its equi-affine
version, the surface with its modified metric tensor can be treated as a canonical
Euclidean object on which most classical Euclidean processing and analysis tools
can be applied. The new definition of a metric is used to extend the fast marching
method technique for computing geodesic distances on surfaces, where now, the
distances are defined with respect to an affine-invariant arclength. Applications
of the proposed framework demonstrate its invariance, efficiency, and accuracy
in shape analysis."
article_processing_charge: No
article_type: letter_note
arxiv: 1
author:
- first_name: Dan
full_name: Raviv, Dan
last_name: Raviv
- first_name: Alexander
full_name: Bronstein, Alexander
id: 58f3726e-7cba-11ef-ad8b-e6e8cb3904e6
last_name: Bronstein
orcid: 0000-0001-9699-8730
- first_name: Michael M.
full_name: Bronstein, Michael M.
last_name: Bronstein
- first_name: Ron
full_name: Kimmel, Ron
last_name: Kimmel
- first_name: Nir
full_name: Sochen, Nir
last_name: Sochen
citation:
ama: Raviv D, Bronstein AM, Bronstein MM, Kimmel R, Sochen N. Affine-invariant geodesic
geometry of deformable 3D shapes. Computers & Graphics. 2011;35(3):692-697.
doi:10.1016/j.cag.2011.03.030
apa: Raviv, D., Bronstein, A. M., Bronstein, M. M., Kimmel, R., & Sochen, N.
(2011). Affine-invariant geodesic geometry of deformable 3D shapes. Computers
& Graphics. Elsevier. https://doi.org/10.1016/j.cag.2011.03.030
chicago: Raviv, Dan, Alex M. Bronstein, Michael M. Bronstein, Ron Kimmel, and Nir
Sochen. “Affine-Invariant Geodesic Geometry of Deformable 3D Shapes.” Computers
& Graphics. Elsevier, 2011. https://doi.org/10.1016/j.cag.2011.03.030.
ieee: D. Raviv, A. M. Bronstein, M. M. Bronstein, R. Kimmel, and N. Sochen, “Affine-invariant
geodesic geometry of deformable 3D shapes,” Computers & Graphics, vol.
35, no. 3. Elsevier, pp. 692–697, 2011.
ista: Raviv D, Bronstein AM, Bronstein MM, Kimmel R, Sochen N. 2011. Affine-invariant
geodesic geometry of deformable 3D shapes. Computers & Graphics. 35(3), 692–697.
mla: Raviv, Dan, et al. “Affine-Invariant Geodesic Geometry of Deformable 3D Shapes.”
Computers & Graphics, vol. 35, no. 3, Elsevier, 2011, pp. 692–97, doi:10.1016/j.cag.2011.03.030.
short: D. Raviv, A.M. Bronstein, M.M. Bronstein, R. Kimmel, N. Sochen, Computers
& Graphics 35 (2011) 692–697.
date_created: 2024-10-15T11:20:54Z
date_published: 2011-06-01T00:00:00Z
date_updated: 2024-11-12T08:37:24Z
day: '01'
doi: 10.1016/j.cag.2011.03.030
extern: '1'
external_id:
arxiv:
- '1012.5936'
intvolume: ' 35'
issue: '3'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.48550/arXiv.1012.5936
month: '06'
oa: 1
oa_version: Preprint
page: 692-697
publication: Computers & Graphics
publication_identifier:
issn:
- 0097-8493
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Affine-invariant geodesic geometry of deformable 3D shapes
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 35
year: '2011'
...
---
_id: '18377'
abstract:
- lang: eng
text: We introduce an (equi-)affine invariant diffusion geometry by which surfaces
that go through squeeze and shear transformations can still be properly analyzed.
The definition of an affine invariant metric enables us to construct an invariant
Laplacian from which local and global geometric structures are extracted. Applications
of the proposed framework demonstrate its power in generalizing and enriching
the existing set of tools for shape analysis.
article_number: '5995486'
article_processing_charge: No
arxiv: 1
author:
- first_name: Dan
full_name: Raviv, Dan
last_name: Raviv
- first_name: Michael M.
full_name: Bronstein, Michael M.
last_name: Bronstein
- first_name: Alexander
full_name: Bronstein, Alexander
id: 58f3726e-7cba-11ef-ad8b-e6e8cb3904e6
last_name: Bronstein
orcid: 0000-0001-9699-8730
- first_name: Ron
full_name: Kimmel, Ron
last_name: Kimmel
- first_name: Nir
full_name: Sochen, Nir
last_name: Sochen
citation:
ama: 'Raviv D, Bronstein MM, Bronstein AM, Kimmel R, Sochen N. Affine-invariant
diffusion geometry for the analysis of deformable 3D shapes. In: CVPR 2011.
IEEE; 2011. doi:10.1109/cvpr.2011.5995486'
apa: 'Raviv, D., Bronstein, M. M., Bronstein, A. M., Kimmel, R., & Sochen, N.
(2011). Affine-invariant diffusion geometry for the analysis of deformable 3D
shapes. In CVPR 2011. Colorado Springs, CO, United States: IEEE. https://doi.org/10.1109/cvpr.2011.5995486'
chicago: Raviv, Dan, Michael M. Bronstein, Alex M. Bronstein, Ron Kimmel, and Nir
Sochen. “Affine-Invariant Diffusion Geometry for the Analysis of Deformable 3D
Shapes.” In CVPR 2011. IEEE, 2011. https://doi.org/10.1109/cvpr.2011.5995486.
ieee: D. Raviv, M. M. Bronstein, A. M. Bronstein, R. Kimmel, and N. Sochen, “Affine-invariant
diffusion geometry for the analysis of deformable 3D shapes,” in CVPR 2011,
Colorado Springs, CO, United States, 2011.
ista: Raviv D, Bronstein MM, Bronstein AM, Kimmel R, Sochen N. 2011. Affine-invariant
diffusion geometry for the analysis of deformable 3D shapes. CVPR 2011. IEEE Computer
Vision and Pattern Recognition (CVPR) 2011, 5995486.
mla: Raviv, Dan, et al. “Affine-Invariant Diffusion Geometry for the Analysis of
Deformable 3D Shapes.” CVPR 2011, 5995486, IEEE, 2011, doi:10.1109/cvpr.2011.5995486.
short: D. Raviv, M.M. Bronstein, A.M. Bronstein, R. Kimmel, N. Sochen, in:, CVPR
2011, IEEE, 2011.
conference:
end_date: 2011-06-25
location: Colorado Springs, CO, United States
name: IEEE Computer Vision and Pattern Recognition (CVPR) 2011
start_date: 2011-06-20
date_created: 2024-10-15T11:20:54Z
date_published: 2011-08-22T00:00:00Z
date_updated: 2024-12-05T14:15:22Z
day: '22'
doi: 10.1109/cvpr.2011.5995486
extern: '1'
external_id:
arxiv:
- '1012.5933'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.48550/arXiv.1012.5933
month: '08'
oa: 1
oa_version: Preprint
publication: CVPR 2011
publication_identifier:
eissn:
- 1063-6919
isbn:
- '9781457703942'
publication_status: published
publisher: IEEE
quality_controlled: '1'
status: public
title: Affine-invariant diffusion geometry for the analysis of deformable 3D shapes
type: conference
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
year: '2011'
...